Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:23:53 (4074002): wrapper (7.7.26015): starting
07:23:53 (4074002): wrapper: running run_atlas (--nthreads 9)
[2025-04-07 07:23:53] Arguments: --nthreads 9
[2025-04-07 07:23:53] Threads: 9
[2025-04-07 07:23:53] Checking for CVMFS
[2025-04-07 07:23:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-07 07:23:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-07 07:23:55] Running cvmfs_config stat atlas.cern.ch
[2025-04-07 07:23:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-07 07:23:56] 2.12.6.0 1724982 195489 470616 144600 2 289 18070543 32935936 17867 130560 0 30365240 99.766 17174114 23020 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-07 07:23:56] CVMFS is ok
[2025-04-07 07:23:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-07 07:23:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-07 07:23:56] Further information can be found at the LHC@home message board.
[2025-04-07 07:23:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-07 07:23:56] Checking for apptainer binary...
[2025-04-07 07:23:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-07 07:23:56] Running /usr/bin/apptainer --version
[2025-04-07 07:23:56] apptainer version 1.4.0-1.el9
[2025-04-07 07:23:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-07 07:23:57] c6-2-29-1.aglt2.org
[2025-04-07 07:23:57] apptainer works
[2025-04-07 07:23:57] Set ATHENA_PROC_NUMBER=9
[2025-04-07 07:23:57] Set ATHENA_CORE_NUMBER=9
[2025-04-07 07:23:57] Starting ATLAS job with PandaID=6592597008
[2025-04-07 07:23:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-07 12:18:09]  *** The last 200 lines of the pilot log: ***
[2025-04-07 12:18:09] 2025-04-07 16:17:46,452 | INFO     | mean x: 1744033941.0666666
[2025-04-07 12:18:09] 2025-04-07 16:17:46,452 | INFO     | mean y: 2528719.7263157894
[2025-04-07 12:18:09] 2025-04-07 16:17:46,452 | INFO     | -- intersect: -25568967886.16202
[2025-04-07 12:18:09] 2025-04-07 16:17:46,452 | INFO     | intersect: -25568967886.16202
[2025-04-07 12:18:09] 2025-04-07 16:17:46,452 | INFO     | chi2: 6.7074368069800405
[2025-04-07 12:18:09] 2025-04-07 16:17:46,453 | INFO     | sum of square deviations: 6807489796.57141
[2025-04-07 12:18:09] 2025-04-07 16:17:46,455 | INFO     | sum of deviations: 140281237435.42853
[2025-04-07 12:18:09] 2025-04-07 16:17:46,455 | INFO     | mean x: 1744033788.5714285
[2025-04-07 12:18:09] 2025-04-07 16:17:46,455 | INFO     | mean y: 2542947.3535714285
[2025-04-07 12:18:09] 2025-04-07 16:17:46,455 | INFO     | -- intersect: -35936580768.00169
[2025-04-07 12:18:09] 2025-04-07 16:17:46,464 | INFO     | intersect: -35936580768.00169
[2025-04-07 12:18:09] 2025-04-07 16:17:46,464 | INFO     | chi2: 5.343126446538335
[2025-04-07 12:18:09] 2025-04-07 16:17:46,464 | INFO     | current chi2=5.343126446538335 (change=20.340264093460362 %)
[2025-04-07 12:18:09] 2025-04-07 16:17:46,464 | INFO     | right removable region: 279
[2025-04-07 12:18:09] 2025-04-07 16:17:46,465 | INFO     | sum of square deviations: 6807390670.110668
[2025-04-07 12:18:09] 2025-04-07 16:17:46,467 | INFO     | sum of deviations: 29651823916.93206
[2025-04-07 12:18:09] 2025-04-07 16:17:46,467 | INFO     | mean x: 1744034093.5821428
[2025-04-07 12:18:09] 2025-04-07 16:17:46,467 | INFO     | mean y: 2559705.5464285715
[2025-04-07 12:18:09] 2025-04-07 16:17:46,467 | INFO     | -- intersect: -7594153095.892246
[2025-04-07 12:18:09] 2025-04-07 16:17:46,467 | INFO     | intersect: -7594153095.892246
[2025-04-07 12:18:09] 2025-04-07 16:17:46,468 | INFO     | chi2: 3.978987211075198
[2025-04-07 12:18:09] 2025-04-07 16:17:46,468 | INFO     | current chi2=3.978987211075198 (change=40.677976914601764 %)
[2025-04-07 12:18:09] 2025-04-07 16:17:46,468 | INFO     | sum of square deviations: 6449132114.349113
[2025-04-07 12:18:09] 2025-04-07 16:17:46,470 | INFO     | sum of deviations: -22244670856.029106
[2025-04-07 12:18:09] 2025-04-07 16:17:46,471 | INFO     | mean x: 1744034246.0981817
[2025-04-07 12:18:09] 2025-04-07 16:17:46,471 | INFO     | mean y: 2581792.7418181817
[2025-04-07 12:18:09] 2025-04-07 16:17:46,471 | INFO     | -- intersect: 6018192432.781001
[2025-04-07 12:18:09] 2025-04-07 16:17:46,471 | INFO     | intersect: 6018192432.781001
[2025-04-07 12:18:09] 2025-04-07 16:17:46,471 | INFO     | chi2: 2.7669423515293037
[2025-04-07 12:18:09] 2025-04-07 16:17:46,471 | INFO     | current chi2=2.7669423515293037 (change=30.4611398642414 %)
[2025-04-07 12:18:09] 2025-04-07 16:17:46,472 | INFO     | sum of square deviations: 6103647475.707366
[2025-04-07 12:18:09] 2025-04-07 16:17:46,474 | INFO     | sum of deviations: -65457993028.96669
[2025-04-07 12:18:09] 2025-04-07 16:17:46,474 | INFO     | mean x: 1744034398.6185186
[2025-04-07 12:18:09] 2025-04-07 16:17:46,474 | INFO     | mean y: 2600832.2333333334
[2025-04-07 12:18:09] 2025-04-07 16:17:46,474 | INFO     | -- intersect: 18706333634.858658
[2025-04-07 12:18:09] 2025-04-07 16:17:46,474 | INFO     | intersect: 18706333634.858658
[2025-04-07 12:18:09] 2025-04-07 16:17:46,502 | INFO     | chi2: 1.8544872866241935
[2025-04-07 12:18:09] 2025-04-07 16:17:46,503 | INFO     | current chi2=1.8544872866241935 (change=32.97701755155077 %)
[2025-04-07 12:18:09] 2025-04-07 16:17:46,503 | INFO     | sum of square deviations: 5770770991.637729
[2025-04-07 12:18:09] 2025-04-07 16:17:46,505 | INFO     | sum of deviations: -76939708250.5887
[2025-04-07 12:18:09] 2025-04-07 16:17:46,505 | INFO     | mean x: 1744034551.1283019
[2025-04-07 12:18:09] 2025-04-07 16:17:46,505 | INFO     | mean y: 2606062.958490566
[2025-04-07 12:18:09] 2025-04-07 16:17:46,505 | INFO     | -- intersect: 23255219922.909378
[2025-04-07 12:18:09] 2025-04-07 16:17:46,505 | INFO     | intersect: 23255219922.909378
[2025-04-07 12:18:09] 2025-04-07 16:17:46,506 | INFO     | chi2: 1.750320804248707
[2025-04-07 12:18:09] 2025-04-07 16:17:46,506 | INFO     | current chi2=1.750320804248707 (change=5.61699630549128 %)
[2025-04-07 12:18:09] 2025-04-07 16:17:46,506 | INFO     | left removable region: 40
[2025-04-07 12:18:09] 2025-04-07 16:17:46,535 | INFO     | sum of square deviations: 4233526682.9790735
[2025-04-07 12:18:09] 2025-04-07 16:17:46,537 | INFO     | sum of deviations: -3608508999.1255283
[2025-04-07 12:18:09] 2025-04-07 16:17:46,537 | INFO     | mean x: 1744034978.129707
[2025-04-07 12:18:09] 2025-04-07 16:17:46,537 | INFO     | mean y: 2602634.778242678
[2025-04-07 12:18:09] 2025-04-07 16:17:46,537 | INFO     | -- intersect: 1489156608.4837275
[2025-04-07 12:18:09] 2025-04-07 16:17:46,538 | INFO     | intersect: 1489156608.4837275
[2025-04-07 12:18:09] 2025-04-07 16:17:46,538 | INFO     | chi2: 0.1248140025847159
[2025-04-07 12:18:09] 2025-04-07 16:17:46,538 | INFO     | -- intersect: 1489156608.4837275
[2025-04-07 12:18:09] 2025-04-07 16:17:46,538 | INFO     | current memory leak: -0.85 B/s (using 239 data points, chi2=0.12)
[2025-04-07 12:18:09] 2025-04-07 16:17:46,539 | INFO     | ..............................
[2025-04-07 12:18:09] 2025-04-07 16:17:46,539 | INFO     | . Timing measurements:
[2025-04-07 12:18:09] 2025-04-07 16:17:46,539 | INFO     | . get job = 0 s
[2025-04-07 12:18:09] 2025-04-07 16:17:46,539 | INFO     | . initial setup = 5 s
[2025-04-07 12:18:09] 2025-04-07 16:17:46,570 | INFO     | . payload setup = 50 s
[2025-04-07 12:18:09] 2025-04-07 16:17:46,570 | INFO     | . stage-in = 0 s
[2025-04-07 12:18:09] 2025-04-07 16:17:46,570 | INFO     | . payload execution = 17368 s
[2025-04-07 12:18:09] 2025-04-07 16:17:46,570 | INFO     | . stage-out = 6 s
[2025-04-07 12:18:09] 2025-04-07 16:17:46,570 | INFO     | . log creation = 1 s
[2025-04-07 12:18:09] 2025-04-07 16:17:46,570 | INFO     | ..............................
[2025-04-07 12:18:09] 2025-04-07 16:17:47,268 | INFO     | 
[2025-04-07 12:18:09] 2025-04-07 16:17:47,268 | INFO     | job summary report
[2025-04-07 12:18:09] 2025-04-07 16:17:47,268 | INFO     | --------------------------------------------------
[2025-04-07 12:18:09] 2025-04-07 16:17:47,268 | INFO     | PanDA job id: 6592597008
[2025-04-07 12:18:09] 2025-04-07 16:17:47,268 | INFO     | task id: 43880808
[2025-04-07 12:18:09] 2025-04-07 16:17:47,268 | INFO     | errors: (none)
[2025-04-07 12:18:09] 2025-04-07 16:17:47,268 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | pilot state: finished 
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | transexitcode: 0
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | exeerrorcode: 0
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | exeerrordiag: 
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | exitcode: 0
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | exitmsg: OK
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | cpuconsumptiontime: 46375 s
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | nevents: 400
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | neventsw: 0
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | pid: 4089264
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | pgrp: 4089264
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | corecount: 9
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | event service: False
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | sizes: {0: 2417163, 1: 2417362, 12: 2417362, 23: 2417390, 35: 2417652, 46: 2417652, 17421: 2449470, 17422: 2449469, 17429: 2458466, 17430: 2458522, 17472: 2458692}
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | --------------------------------------------------
[2025-04-07 12:18:09] 2025-04-07 16:17:47,269 | INFO     | 
[2025-04-07 12:18:09] 2025-04-07 16:17:47,270 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-07 12:18:09] 2025-04-07 16:17:47,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,511 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,511 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-07 12:18:09] 2025-04-07 16:17:47,511 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,511 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-07 12:18:09] 2025-04-07 16:17:47,511 | INFO     | job 6592597008 has completed (purged errors)
[2025-04-07 12:18:09] 2025-04-07 16:17:47,511 | INFO     | overall cleanup function is called
[2025-04-07 12:18:09] 2025-04-07 16:17:48,532 | INFO     | --- collectZombieJob: --- 10, [4089264]
[2025-04-07 12:18:09] 2025-04-07 16:17:48,532 | INFO     | zombie collector waiting for pid 4089264
[2025-04-07 12:18:09] 2025-04-07 16:17:48,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-07 12:18:09] 2025-04-07 16:17:48,533 | INFO     | collected zombie processes
[2025-04-07 12:18:09] 2025-04-07 16:17:48,533 | INFO     | will attempt to kill all subprocesses of pid=4089264
[2025-04-07 12:18:09] 2025-04-07 16:17:50,811 | INFO     | process IDs to be killed: [4089264] (in reverse order)
[2025-04-07 12:18:09] 2025-04-07 16:17:51,759 | WARNING  | found no corresponding commands to process id(s)
[2025-04-07 12:18:09] 2025-04-07 16:17:51,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-07 12:18:09] 2025-04-07 16:17:51,863 | INFO     | did not find any defunct processes belonging to 4089264
[2025-04-07 12:18:09] 2025-04-07 16:17:51,930 | INFO     | did not find any defunct processes belonging to 4089264
[2025-04-07 12:18:09] 2025-04-07 16:17:51,930 | INFO     | ready for new job
[2025-04-07 12:18:09] 2025-04-07 16:17:51,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-07 12:18:09] 2025-04-07 16:17:51,957 | INFO     | **************************************
[2025-04-07 12:18:09] 2025-04-07 16:17:51,957 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-07 12:18:09] 2025-04-07 16:17:51,957 | INFO     | **************************************
[2025-04-07 12:18:09] 2025-04-07 16:17:51,957 | INFO     | 
[2025-04-07 12:18:09] 2025-04-07 16:17:51,975 | INFO     | architecture information:
[2025-04-07 12:18:09] 2025-04-07 16:17:52,009 | INFO     | executing command: cat /etc/os-release
[2025-04-07 12:18:09] 2025-04-07 16:17:52,192 | INFO     | cat /etc/os-release:
[2025-04-07 12:18:09] NAME="CentOS Linux"
[2025-04-07 12:18:09] VERSION="7 (Core)"
[2025-04-07 12:18:09] ID="centos"
[2025-04-07 12:18:09] ID_LIKE="rhel fedora"
[2025-04-07 12:18:09] VERSION_ID="7"
[2025-04-07 12:18:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-07 12:18:09] ANSI_COLOR="0;31"
[2025-04-07 12:18:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-07 12:18:09] HOME_URL="https://www.centos.org/"
[2025-04-07 12:18:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-07 12:18:09] 
[2025-04-07 12:18:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-07 12:18:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-07 12:18:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-07 12:18:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-07 12:18:09] 
[2025-04-07 12:18:09] 2025-04-07 16:17:52,193 | INFO     | **************************************
[2025-04-07 12:18:09] 2025-04-07 16:17:52,700 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-07 12:18:09] 2025-04-07 16:17:52,871 | INFO     | sufficient remaining disk space (75483840512 B)
[2025-04-07 12:18:09] 2025-04-07 16:17:52,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-07 12:18:09] 2025-04-07 16:17:52,871 | INFO     | current server update state: UPDATING_FINAL
[2025-04-07 12:18:09] 2025-04-07 16:17:52,871 | INFO     | update_server=False
[2025-04-07 12:18:09] 2025-04-07 16:17:52,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-07 12:18:09] 2025-04-07 16:17:52,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-07 12:18:09] 2025-04-07 16:17:52,879 | INFO     | aborting loop
[2025-04-07 12:18:09] 2025-04-07 16:17:52,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-07 12:18:09] 2025-04-07 16:17:52,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-07 12:18:09] 2025-04-07 16:17:53,070 | INFO     | all payload control threads have been joined
[2025-04-07 12:18:09] 2025-04-07 16:17:53,550 | INFO     | all job control threads have been joined
[2025-04-07 12:18:09] 2025-04-07 16:17:53,891 | INFO     | [job] job monitor thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:53,892 | INFO     | [job] queue monitor thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:53,896 | INFO     | all data control threads have been joined
[2025-04-07 12:18:09] 2025-04-07 16:17:53,896 | INFO     | [job] retrieve thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:54,008 | INFO     | [data] copytool_in thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:54,049 | INFO     | [payload] validate_post thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:54,135 | INFO     | [payload] control thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:54,434 | INFO     | [payload] execute_payloads thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:54,556 | INFO     | [job] control thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:54,559 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:54,560 | INFO     | [job] validate thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:54,897 | INFO     | [data] copytool_out thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:54,898 | INFO     | [payload] validate_pre thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:54,902 | INFO     | [data] control thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:54,956 | INFO     | [payload] failed_post thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:55,061 | INFO     | [job] create_data_payload thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:17:56,305 | INFO     | PID=4079378 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-07 12:18:09] 2025-04-07 16:17:56,306 | INFO     | .. there are 16 such processes running
[2025-04-07 12:18:09] 2025-04-07 16:17:56,306 | INFO     | found 0 job(s) in 20 queues
[2025-04-07 12:18:09] 2025-04-07 16:17:56,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-07 12:18:09] 2025-04-07 16:17:56,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-07 12:18:09] 2025-04-07 16:17:56,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-07 12:18:09] 2025-04-07 16:18:00,322 | INFO     | [data] queue_monitor thread has finished
[2025-04-07 12:18:09] 2025-04-07 16:18:02,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248738596672)>', '<ExcThread(monitor, started 140247727863552)>']
[2025-04-07 12:18:09] 2025-04-07 16:18:02,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-07 12:18:09] 2025-04-07 16:18:02,354 | INFO     | [monitor] control thread has ended
[2025-04-07 12:18:09] 2025-04-07 16:18:07,369 | INFO     | all workflow threads have been joined
[2025-04-07 12:18:09] 2025-04-07 16:18:07,425 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-07 12:18:09] 2025-04-07 16:18:07,430 | INFO     | traces error code: 0
[2025-04-07 12:18:09] 2025-04-07 16:18:07,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-07 12:18:09] 2025-04-07 16:18:08,708 [wrapper] ==== pilot stdout END ====
[2025-04-07 12:18:09] 2025-04-07 16:18:08,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-07 12:18:09] 2025-04-07 16:18:08,775 [wrapper] pilotpid: 4079378
[2025-04-07 12:18:09] 2025-04-07 16:18:08,809 [wrapper] Pilot exit status: 0
[2025-04-07 12:18:09] 2025-04-07 16:18:09,013 [wrapper] pandaids: 6592597008
[2025-04-07 12:18:09] 2025-04-07 16:18:09,222 [wrapper] cleanup supervisor_pilot  883872 4079379
[2025-04-07 12:18:09] 2025-04-07 16:18:09,261 [wrapper] Test setup, not cleaning
[2025-04-07 12:18:09] 2025-04-07 16:18:09,305 [wrapper] apfmon messages muted
[2025-04-07 12:18:09] 2025-04-07 16:18:09,346 [wrapper] ==== wrapper stdout END ====
[2025-04-07 12:18:09] 2025-04-07 16:18:09,359 [wrapper] ==== wrapper stderr END ====
[2025-04-07 12:18:10]  *** Error codes and diagnostics ***
[2025-04-07 12:18:10]     "exeErrorCode": 0,
[2025-04-07 12:18:10]     "exeErrorDiag": "",
[2025-04-07 12:18:10]     "pilotErrorCode": 0,
[2025-04-07 12:18:10]     "pilotErrorDiag": "",
[2025-04-07 12:18:10]  *** Listing of results directory ***
[2025-04-07 12:18:10] total 550416
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas    495897 Apr  7 04:57 pilot3.tar.gz
[2025-04-07 12:18:10] -rwx------. 1 boincer umatlas     37140 Apr  7 05:00 runpilot2-wrapper.sh
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas      5111 Apr  7 05:00 queuedata.json
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas       100 Apr  7 07:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-07 12:18:10] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  7 07:23 run_atlas
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas       105 Apr  7 07:23 job.xml
[2025-04-07 12:18:10] -rw-r--r--. 2 boincer umatlas 334877080 Apr  7 07:23 EVNT.43880806._000003.pool.root.1
[2025-04-07 12:18:10] -rw-r--r--. 2 boincer umatlas     17569 Apr  7 07:23 start_atlas.sh
[2025-04-07 12:18:10] drwxrwx--x. 2 boincer umatlas      4096 Apr  7 07:23 shared
[2025-04-07 12:18:10] -rw-r--r--. 2 boincer umatlas    508886 Apr  7 07:23 input.tar.gz
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas         0 Apr  7 07:23 boinc_lockfile
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas      2594 Apr  7 07:23 pandaJob.out
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas       467 Apr  7 07:23 setup.sh.local
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas    983715 Apr  7 07:25 agis_schedconf.cvmfs.json
[2025-04-07 12:18:10] drwx------. 4 boincer umatlas      4096 Apr  7 07:25 pilot3
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas      6840 Apr  7 12:11 init_data.xml
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas 221056916 Apr  7 12:15 HITS.43880808._000144.pool.root.1
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas       531 Apr  7 12:15 boinc_task_state.xml
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas      1048 Apr  7 12:16 memory_monitor_summary.json
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas   1603526 Apr  7 12:16 agis_ddmendpoints.agis.ALL.json
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas    488322 Apr  7 12:17 log.43880808._000144.job.log.tgz.1
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas        95 Apr  7 12:17 pilot_heartbeat.json
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas      7716 Apr  7 12:17 heartbeat.json
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas      4748 Apr  7 12:18 pilotlog.txt
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas      8192 Apr  7 12:18 boinc_mmap_file
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas   1434550 Apr  7 12:18 log.43880808._000144.job.log.1
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas        28 Apr  7 12:18 wrapper_checkpoint.txt
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas       357 Apr  7 12:18 output.list
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas       620 Apr  7 12:18 runtime_log
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas   1945600 Apr  7 12:18 result.tar.gz
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas       659 Apr  7 12:18 yx7NDmjWxL7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmB4ILDm17x4am.diag
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas     11424 Apr  7 12:18 runtime_log.err
[2025-04-07 12:18:10] -rw-r--r--. 1 boincer umatlas     20907 Apr  7 12:18 stderr.txt
[2025-04-07 12:18:10] HITS file was successfully produced:
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas 221056916 Apr  7 12:15 shared/HITS.pool.root.1
[2025-04-07 12:18:10]  *** Contents of shared directory: ***
[2025-04-07 12:18:10] total 545332
[2025-04-07 12:18:10] -rw-r--r--. 2 boincer umatlas 334877080 Apr  7 07:23 ATLAS.root_0
[2025-04-07 12:18:10] -rw-r--r--. 2 boincer umatlas     17569 Apr  7 07:23 start_atlas.sh
[2025-04-07 12:18:10] -rw-r--r--. 2 boincer umatlas    508886 Apr  7 07:23 input.tar.gz
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas 221056916 Apr  7 12:15 HITS.pool.root.1
[2025-04-07 12:18:10] -rw-------. 1 boincer umatlas   1945600 Apr  7 12:18 result.tar.gz
12:18:11 (4074002): run_atlas exited; CPU time 46814.118538
12:18:11 (4074002): called boinc_finish(0)

</stderr_txt>
]]>

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