Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:03:35 (3387741): wrapper (7.7.26015): starting
04:03:35 (3387741): wrapper: running run_atlas (--nthreads 8)
[2025-04-07 04:03:35] Arguments: --nthreads 8
[2025-04-07 04:03:35] Threads: 8
[2025-04-07 04:03:35] Checking for CVMFS
[2025-04-07 04:03:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-07 04:03:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-07 04:03:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-07 04:03:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-07 04:03:37] 2.12.6.0 981265 21598 250716 144593 0 293 23365716 32935936 20660 130560 0 27187645 99.549 35928302 26428 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-07 04:03:37] CVMFS is ok
[2025-04-07 04:03:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-07 04:03:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-07 04:03:37] Further information can be found at the LHC@home message board.
[2025-04-07 04:03:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-07 04:03:37] Checking for apptainer binary...
[2025-04-07 04:03:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-07 04:03:37] Running /usr/bin/apptainer --version
[2025-04-07 04:03:38] apptainer version 1.4.0-1.el9
[2025-04-07 04:03:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-07 04:03:39] c6-4-5-1.aglt2.org
[2025-04-07 04:03:39] apptainer works
[2025-04-07 04:03:40] Set ATHENA_PROC_NUMBER=8
[2025-04-07 04:03:40] Set ATHENA_CORE_NUMBER=8
[2025-04-07 04:03:40] Starting ATLAS job with PandaID=6592543002
[2025-04-07 04:03:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-07 15:22:46]  *** The last 200 lines of the pilot log: ***
[2025-04-07 15:22:46] 2025-04-07 19:22:33,772 | INFO     | sum of deviations: 504132743266.5442
[2025-04-07 15:22:46] 2025-04-07 19:22:33,772 | INFO     | mean x: 1744033648.508346
[2025-04-07 15:22:46] 2025-04-07 19:22:33,772 | INFO     | mean y: 2278689.628224583
[2025-04-07 15:22:46] 2025-04-07 19:22:33,772 | INFO     | -- intersect: -9905680504.589798
[2025-04-07 15:22:46] 2025-04-07 19:22:33,772 | INFO     | intersect: -9905680504.589798
[2025-04-07 15:22:46] 2025-04-07 19:22:33,773 | INFO     | chi2: 6.227485955262576
[2025-04-07 15:22:46] 2025-04-07 19:22:33,773 | INFO     | current chi2=6.227485955262576 (change=36.66741593912049 %)
[2025-04-07 15:22:46] 2025-04-07 19:22:33,774 | INFO     | sum of square deviations: 86734486650.92516
[2025-04-07 15:22:46] 2025-04-07 19:22:33,783 | INFO     | sum of deviations: 371093875353.2194
[2025-04-07 15:22:46] 2025-04-07 19:22:33,783 | INFO     | mean x: 1744033801.0107033
[2025-04-07 15:22:46] 2025-04-07 19:22:33,783 | INFO     | mean y: 2288809.111620795
[2025-04-07 15:22:46] 2025-04-07 19:22:33,784 | INFO     | -- intersect: -7459567333.172518
[2025-04-07 15:22:46] 2025-04-07 19:22:33,784 | INFO     | intersect: -7459567333.172518
[2025-04-07 15:22:46] 2025-04-07 19:22:33,784 | INFO     | chi2: 4.528239770446125
[2025-04-07 15:22:46] 2025-04-07 19:22:33,785 | INFO     | current chi2=4.528239770446125 (change=27.28623070406916 %)
[2025-04-07 15:22:46] 2025-04-07 19:22:33,785 | INFO     | sum of square deviations: 84760143112.11053
[2025-04-07 15:22:46] 2025-04-07 19:22:33,794 | INFO     | sum of deviations: 245462336839.27295
[2025-04-07 15:22:46] 2025-04-07 19:22:33,794 | INFO     | mean x: 1744033953.514638
[2025-04-07 15:22:46] 2025-04-07 19:22:33,794 | INFO     | mean y: 2298513.1818181816
[2025-04-07 15:22:46] 2025-04-07 19:22:33,795 | INFO     | -- intersect: -5048361313.931814
[2025-04-07 15:22:46] 2025-04-07 19:22:33,795 | INFO     | intersect: -5048361313.931814
[2025-04-07 15:22:46] 2025-04-07 19:22:33,795 | INFO     | chi2: 3.0180867522760666
[2025-04-07 15:22:46] 2025-04-07 19:22:33,796 | INFO     | current chi2=3.0180867522760666 (change=33.349669954011226 %)
[2025-04-07 15:22:46] 2025-04-07 19:22:33,796 | INFO     | sum of square deviations: 82816026018.812
[2025-04-07 15:22:46] 2025-04-07 19:22:33,804 | INFO     | sum of deviations: 144395840267.86334
[2025-04-07 15:22:46] 2025-04-07 19:22:33,805 | INFO     | mean x: 1744034106.0170808
[2025-04-07 15:22:46] 2025-04-07 19:22:33,805 | INFO     | mean y: 2306435.0124223605
[2025-04-07 15:22:46] 2025-04-07 19:22:33,805 | INFO     | -- intersect: -3038545466.489634
[2025-04-07 15:22:46] 2025-04-07 19:22:33,805 | INFO     | intersect: -3038545466.489634
[2025-04-07 15:22:46] 2025-04-07 19:22:33,806 | INFO     | chi2: 2.011061999465994
[2025-04-07 15:22:46] 2025-04-07 19:22:33,806 | INFO     | current chi2=2.011061999465994 (change=33.366328918498866 %)
[2025-04-07 15:22:46] 2025-04-07 19:22:33,807 | INFO     | sum of square deviations: 80901823447.46474
[2025-04-07 15:22:46] 2025-04-07 19:22:33,815 | INFO     | sum of deviations: 64863610364.53534
[2025-04-07 15:22:46] 2025-04-07 19:22:33,815 | INFO     | mean x: 1744034258.5211267
[2025-04-07 15:22:46] 2025-04-07 19:22:33,815 | INFO     | mean y: 2312770.145539906
[2025-04-07 15:22:46] 2025-04-07 19:22:33,815 | INFO     | -- intersect: -1395979057.9808717
[2025-04-07 15:22:46] 2025-04-07 19:22:33,815 | INFO     | intersect: -1395979057.9808717
[2025-04-07 15:22:46] 2025-04-07 19:22:33,816 | INFO     | chi2: 1.4061924988414312
[2025-04-07 15:22:46] 2025-04-07 19:22:33,816 | INFO     | current chi2=1.4061924988414312 (change=30.077118496852734 %)
[2025-04-07 15:22:46] 2025-04-07 19:22:33,817 | INFO     | sum of square deviations: 79017381342.6449
[2025-04-07 15:22:46] 2025-04-07 19:22:33,825 | INFO     | sum of deviations: 7045301189.925903
[2025-04-07 15:22:46] 2025-04-07 19:22:33,825 | INFO     | mean x: 1744034411.0236592
[2025-04-07 15:22:46] 2025-04-07 19:22:33,826 | INFO     | mean y: 2317445.471608833
[2025-04-07 15:22:46] 2025-04-07 19:22:33,826 | INFO     | -- intersect: -153183122.91568348
[2025-04-07 15:22:46] 2025-04-07 19:22:33,826 | INFO     | intersect: -153183122.91568348
[2025-04-07 15:22:46] 2025-04-07 19:22:33,826 | INFO     | chi2: 1.0710289542277698
[2025-04-07 15:22:46] 2025-04-07 19:22:33,827 | INFO     | current chi2=1.0710289542277698 (change=23.83482666063176 %)
[2025-04-07 15:22:46] 2025-04-07 19:22:33,827 | INFO     | left removable region: 60
[2025-04-07 15:22:46] 2025-04-07 19:22:33,827 | INFO     | sum of square deviations: 66306303134.51652
[2025-04-07 15:22:46] 2025-04-07 19:22:33,835 | INFO     | sum of deviations: -10336872373.309347
[2025-04-07 15:22:46] 2025-04-07 19:22:33,836 | INFO     | mean x: 1744035143.028428
[2025-04-07 15:22:46] 2025-04-07 19:22:33,836 | INFO     | mean y: 2325424.7240802674
[2025-04-07 15:22:46] 2025-04-07 19:22:33,836 | INFO     | -- intersect: 274213131.2589747
[2025-04-07 15:22:46] 2025-04-07 19:22:33,836 | INFO     | intersect: 274213131.2589747
[2025-04-07 15:22:46] 2025-04-07 19:22:33,837 | INFO     | chi2: 0.18477434943374468
[2025-04-07 15:22:46] 2025-04-07 19:22:33,837 | INFO     | -- intersect: 274213131.2589747
[2025-04-07 15:22:46] 2025-04-07 19:22:33,837 | INFO     | current memory leak: -0.16 B/s (using 598 data points, chi2=0.18)
[2025-04-07 15:22:46] 2025-04-07 19:22:33,838 | INFO     | ..............................
[2025-04-07 15:22:46] 2025-04-07 19:22:33,838 | INFO     | . Timing measurements:
[2025-04-07 15:22:46] 2025-04-07 19:22:33,838 | INFO     | . get job = 0 s
[2025-04-07 15:22:46] 2025-04-07 19:22:33,838 | INFO     | . initial setup = 6 s
[2025-04-07 15:22:46] 2025-04-07 19:22:33,838 | INFO     | . payload setup = 53 s
[2025-04-07 15:22:46] 2025-04-07 19:22:33,838 | INFO     | . stage-in = 0 s
[2025-04-07 15:22:46] 2025-04-07 19:22:33,838 | INFO     | . payload execution = 40502 s
[2025-04-07 15:22:46] 2025-04-07 19:22:33,838 | INFO     | . stage-out = 2 s
[2025-04-07 15:22:46] 2025-04-07 19:22:33,838 | INFO     | . log creation = 0 s
[2025-04-07 15:22:46] 2025-04-07 19:22:33,838 | INFO     | ..............................
[2025-04-07 15:22:46] 2025-04-07 19:22:33,924 | INFO     | 
[2025-04-07 15:22:46] 2025-04-07 19:22:33,924 | INFO     | job summary report
[2025-04-07 15:22:46] 2025-04-07 19:22:33,924 | INFO     | --------------------------------------------------
[2025-04-07 15:22:46] 2025-04-07 19:22:33,924 | INFO     | PanDA job id: 6592543002
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | task id: 43996367
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | errors: (none)
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | pilot state: finished 
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | transexitcode: 0
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | exeerrorcode: 0
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | exeerrordiag: 
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | exitcode: 0
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | exitmsg: OK
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | cpuconsumptiontime: 45458 s
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | nevents: 400
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | neventsw: 0
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | pid: 3432605
[2025-04-07 15:22:46] 2025-04-07 19:22:33,925 | INFO     | pgrp: 3432605
[2025-04-07 15:22:46] 2025-04-07 19:22:33,926 | INFO     | corecount: 8
[2025-04-07 15:22:46] 2025-04-07 19:22:33,926 | INFO     | event service: False
[2025-04-07 15:22:46] 2025-04-07 19:22:33,926 | INFO     | sizes: {0: 2417172, 1: 2417228, 3: 2417455, 4: 2417483, 15: 2417483, 26: 2417511, 38: 2417901, 50: 2417901, 40560: 2460014, 40563: 2469011, 40572: 2469125}
[2025-04-07 15:22:46] 2025-04-07 19:22:33,926 | INFO     | --------------------------------------------------
[2025-04-07 15:22:46] 2025-04-07 19:22:33,926 | INFO     | 
[2025-04-07 15:22:46] 2025-04-07 19:22:33,926 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-07 15:22:46] 2025-04-07 19:22:33,954 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,954 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,954 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,954 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,955 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-07 15:22:46] 2025-04-07 19:22:33,956 | INFO     | job 6592543002 has completed (purged errors)
[2025-04-07 15:22:46] 2025-04-07 19:22:33,956 | INFO     | overall cleanup function is called
[2025-04-07 15:22:46] 2025-04-07 19:22:34,963 | INFO     | --- collectZombieJob: --- 10, [3432605]
[2025-04-07 15:22:46] 2025-04-07 19:22:34,963 | INFO     | zombie collector waiting for pid 3432605
[2025-04-07 15:22:46] 2025-04-07 19:22:34,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-07 15:22:46] 2025-04-07 19:22:34,963 | INFO     | collected zombie processes
[2025-04-07 15:22:46] 2025-04-07 19:22:34,963 | INFO     | will attempt to kill all subprocesses of pid=3432605
[2025-04-07 15:22:46] 2025-04-07 19:22:35,298 | INFO     | process IDs to be killed: [3432605] (in reverse order)
[2025-04-07 15:22:46] 2025-04-07 19:22:35,432 | WARNING  | found no corresponding commands to process id(s)
[2025-04-07 15:22:46] 2025-04-07 19:22:35,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-07 15:22:46] 2025-04-07 19:22:35,446 | INFO     | did not find any defunct processes belonging to 3432605
[2025-04-07 15:22:46] 2025-04-07 19:22:35,462 | INFO     | did not find any defunct processes belonging to 3432605
[2025-04-07 15:22:46] 2025-04-07 19:22:35,462 | INFO     | ready for new job
[2025-04-07 15:22:46] 2025-04-07 19:22:35,462 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-07 15:22:46] 2025-04-07 19:22:35,464 | INFO     | **************************************
[2025-04-07 15:22:46] 2025-04-07 19:22:35,464 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-07 15:22:46] 2025-04-07 19:22:35,464 | INFO     | **************************************
[2025-04-07 15:22:46] 2025-04-07 19:22:35,464 | INFO     | 
[2025-04-07 15:22:46] 2025-04-07 19:22:35,480 | INFO     | architecture information:
[2025-04-07 15:22:46] 2025-04-07 19:22:35,480 | INFO     | executing command: cat /etc/os-release
[2025-04-07 15:22:46] 2025-04-07 19:22:35,500 | INFO     | cat /etc/os-release:
[2025-04-07 15:22:46] NAME="CentOS Linux"
[2025-04-07 15:22:46] VERSION="7 (Core)"
[2025-04-07 15:22:46] ID="centos"
[2025-04-07 15:22:46] ID_LIKE="rhel fedora"
[2025-04-07 15:22:46] VERSION_ID="7"
[2025-04-07 15:22:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-07 15:22:46] ANSI_COLOR="0;31"
[2025-04-07 15:22:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-07 15:22:46] HOME_URL="https://www.centos.org/"
[2025-04-07 15:22:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-07 15:22:46] 
[2025-04-07 15:22:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-07 15:22:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-07 15:22:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-07 15:22:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-07 15:22:46] 
[2025-04-07 15:22:46] 2025-04-07 19:22:35,500 | INFO     | **************************************
[2025-04-07 15:22:46] 2025-04-07 19:22:36,004 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-07 15:22:46] 2025-04-07 19:22:36,019 | INFO     | sufficient remaining disk space (71976353792 B)
[2025-04-07 15:22:46] 2025-04-07 19:22:36,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-07 15:22:46] 2025-04-07 19:22:36,020 | INFO     | current server update state: UPDATING_FINAL
[2025-04-07 15:22:46] 2025-04-07 19:22:36,020 | INFO     | update_server=False
[2025-04-07 15:22:46] 2025-04-07 19:22:36,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-07 15:22:46] 2025-04-07 19:22:36,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-07 15:22:46] 2025-04-07 19:22:36,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-07 15:22:46] 2025-04-07 19:22:36,020 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-07 15:22:46] 2025-04-07 19:22:36,021 | INFO     | found 0 job(s) in 20 queues
[2025-04-07 15:22:46] 2025-04-07 19:22:36,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-07 15:22:46] 2025-04-07 19:22:36,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-07 15:22:46] 2025-04-07 19:22:36,061 | INFO     | all payload control threads have been joined
[2025-04-07 15:22:46] 2025-04-07 19:22:36,338 | INFO     | all data control threads have been joined
[2025-04-07 15:22:46] 2025-04-07 19:22:36,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-07 15:22:46] 2025-04-07 19:22:36,451 | INFO     | aborting loop
[2025-04-07 15:22:46] 2025-04-07 19:22:36,622 | INFO     | all job control threads have been joined
[2025-04-07 15:22:46] 2025-04-07 19:22:37,026 | INFO     | [job] retrieve thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:37,037 | INFO     | [data] copytool_in thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:37,067 | INFO     | [payload] control thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:37,123 | INFO     | [payload] validate_post thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:37,344 | INFO     | [data] control thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:37,457 | INFO     | [job] job monitor thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:37,567 | INFO     | [payload] execute_payloads thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:37,622 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:37,628 | INFO     | [job] control thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:37,710 | INFO     | [job] validate thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:37,855 | INFO     | [payload] validate_pre thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:37,870 | INFO     | [payload] failed_post thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:38,027 | INFO     | [data] copytool_out thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:38,085 | INFO     | [job] create_data_payload thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:38,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-07 15:22:46] 2025-04-07 19:22:39,954 | INFO     | [job] queue monitor thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:40,029 | INFO     | [data] queue_monitor thread has finished
[2025-04-07 15:22:46] 2025-04-07 19:22:40,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643700291392)>', '<ExcThread(monitor, started 140643041003264)>']
[2025-04-07 15:22:46] 2025-04-07 19:22:41,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-07 15:22:46] 2025-04-07 19:22:41,062 | INFO     | [monitor] control thread has ended
[2025-04-07 15:22:46] 2025-04-07 19:22:45,596 | INFO     | all workflow threads have been joined
[2025-04-07 15:22:46] 2025-04-07 19:22:45,596 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-07 15:22:46] 2025-04-07 19:22:45,596 | INFO     | traces error code: 0
[2025-04-07 15:22:46] 2025-04-07 19:22:45,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-07 15:22:46] 2025-04-07 19:22:45,819 [wrapper] ==== pilot stdout END ====
[2025-04-07 15:22:46] 2025-04-07 19:22:45,821 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-07 15:22:46] 2025-04-07 19:22:45,823 [wrapper] pilotpid: 3399588
[2025-04-07 15:22:46] 2025-04-07 19:22:45,825 [wrapper] Pilot exit status: 0
[2025-04-07 15:22:46] 2025-04-07 19:22:45,848 [wrapper] pandaids: 6592543002
[2025-04-07 15:22:46] 2025-04-07 19:22:45,922 [wrapper] cleanup supervisor_pilot 3109710 3399589
[2025-04-07 15:22:46] 2025-04-07 19:22:45,933 [wrapper] Test setup, not cleaning
[2025-04-07 15:22:46] 2025-04-07 19:22:45,936 [wrapper] apfmon messages muted
[2025-04-07 15:22:46] 2025-04-07 19:22:45,938 [wrapper] ==== wrapper stdout END ====
[2025-04-07 15:22:46] 2025-04-07 19:22:45,940 [wrapper] ==== wrapper stderr END ====
[2025-04-07 15:22:46]  *** Error codes and diagnostics ***
[2025-04-07 15:22:46]     "exeErrorCode": 0,
[2025-04-07 15:22:46]     "exeErrorDiag": "",
[2025-04-07 15:22:46]     "pilotErrorCode": 0,
[2025-04-07 15:22:46]     "pilotErrorDiag": "",
[2025-04-07 15:22:46]  *** Listing of results directory ***
[2025-04-07 15:22:46] total 536412
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas    495897 Apr  7 03:40 pilot3.tar.gz
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas      5111 Apr  7 03:58 queuedata.json
[2025-04-07 15:22:46] -rwx------. 1 boincer umatlas     37140 Apr  7 04:02 runpilot2-wrapper.sh
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas       100 Apr  7 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-07 15:22:46] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  7 04:03 run_atlas
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas       105 Apr  7 04:03 job.xml
[2025-04-07 15:22:46] -rw-r--r--. 2 boincer umatlas 328918163 Apr  7 04:03 EVNT.43996363._000003.pool.root.1
[2025-04-07 15:22:46] -rw-r--r--. 2 boincer umatlas     17569 Apr  7 04:03 start_atlas.sh
[2025-04-07 15:22:46] drwxrwx--x. 2 boincer umatlas      4096 Apr  7 04:03 shared
[2025-04-07 15:22:46] -rw-r--r--. 2 boincer umatlas    508887 Apr  7 04:03 input.tar.gz
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas         0 Apr  7 04:03 boinc_lockfile
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas      2607 Apr  7 04:03 pandaJob.out
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas       467 Apr  7 04:03 setup.sh.local
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas    978882 Apr  7 04:04 agis_schedconf.cvmfs.json
[2025-04-07 15:22:46] drwx------. 4 boincer umatlas      4096 Apr  7 04:04 pilot3
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas      6871 Apr  7 15:20 init_data.xml
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas 208514830 Apr  7 15:21 HITS.43996367._000061.pool.root.1
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas       531 Apr  7 15:21 boinc_task_state.xml
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas        95 Apr  7 15:21 pilot_heartbeat.json
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas      1054 Apr  7 15:22 memory_monitor_summary.json
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas   1603526 Apr  7 15:22 agis_ddmendpoints.agis.ALL.json
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas    682656 Apr  7 15:22 log.43996367._000061.job.log.tgz.1
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas      7732 Apr  7 15:22 heartbeat.json
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas      8192 Apr  7 15:22 boinc_mmap_file
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas        28 Apr  7 15:22 wrapper_checkpoint.txt
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas      4476 Apr  7 15:22 pilotlog.txt
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas   3327288 Apr  7 15:22 log.43996367._000061.job.log.1
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas       357 Apr  7 15:22 output.list
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas       620 Apr  7 15:22 runtime_log
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas   4024320 Apr  7 15:22 result.tar.gz
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas     11419 Apr  7 15:22 runtime_log.err
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas       664 Apr  7 15:22 ep7MDmXcwL7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmoltKDmD1PTMn.diag
[2025-04-07 15:22:46] -rw-r--r--. 1 boincer umatlas     20907 Apr  7 15:22 stderr.txt
[2025-04-07 15:22:46] HITS file was successfully produced:
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas 208514830 Apr  7 15:21 shared/HITS.pool.root.1
[2025-04-07 15:22:46]  *** Contents of shared directory: ***
[2025-04-07 15:22:46] total 529300
[2025-04-07 15:22:46] -rw-r--r--. 2 boincer umatlas 328918163 Apr  7 04:03 ATLAS.root_0
[2025-04-07 15:22:46] -rw-r--r--. 2 boincer umatlas     17569 Apr  7 04:03 start_atlas.sh
[2025-04-07 15:22:46] -rw-r--r--. 2 boincer umatlas    508887 Apr  7 04:03 input.tar.gz
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas 208514830 Apr  7 15:21 HITS.pool.root.1
[2025-04-07 15:22:46] -rw-------. 1 boincer umatlas   4024320 Apr  7 15:22 result.tar.gz
15:22:47 (3387741): run_atlas exited; CPU time 46882.758953
15:22:47 (3387741): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN