Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:23:01 (11100): wrapper (7.7.26015): starting
00:23:01 (11100): wrapper: running run_atlas (--nthreads 8)
[2025-04-07 00:23:01] Arguments: --nthreads 8
[2025-04-07 00:23:01] Threads: 8
[2025-04-07 00:23:01] Checking for CVMFS
[2025-04-07 00:23:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-07 00:23:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-07 00:23:03] Running cvmfs_config stat atlas.cern.ch
[2025-04-07 00:23:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-07 00:23:06] 2.12.6.0 425763 28062 153656 144588 0 100 23990915 32935936 21985 130560 0 16960823 99.618 14346378 9118 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-07 00:23:06] CVMFS is ok
[2025-04-07 00:23:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-07 00:23:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-07 00:23:06] Further information can be found at the LHC@home message board.
[2025-04-07 00:23:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-07 00:23:06] Checking for apptainer binary...
[2025-04-07 00:23:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-07 00:23:06] Running /usr/bin/apptainer --version
[2025-04-07 00:23:07] apptainer version 1.4.0-1.el9
[2025-04-07 00:23:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-07 00:23:09] c6-12-25-1.aglt2.org
[2025-04-07 00:23:09] apptainer works
[2025-04-07 00:23:10] Set ATHENA_PROC_NUMBER=8
[2025-04-07 00:23:10] Set ATHENA_CORE_NUMBER=8
[2025-04-07 00:23:11] Starting ATLAS job with PandaID=6592224658
[2025-04-07 00:23:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-07 20:17:24]  *** The last 200 lines of the pilot log: ***
[2025-04-07 20:17:24] 2025-04-08 00:16:46,634 | INFO     | monitor loop #2459: job 0:6592224658 is in state 'finished'
[2025-04-07 20:17:24] 2025-04-08 00:16:46,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 20:17:24] 2025-04-08 00:16:49,153 | INFO     | monitor loop #2460: job 0:6592224658 is in state 'finished'
[2025-04-07 20:17:24] 2025-04-08 00:16:49,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 20:17:24] 2025-04-08 00:16:51,237 | INFO     | PID=28856 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-07 20:17:24] 2025-04-08 00:16:51,240 | INFO     | .. there are 23 such processes running
[2025-04-07 20:17:24] 2025-04-08 00:16:51,677 | INFO     | monitor loop #2461: job 0:6592224658 is in state 'finished'
[2025-04-07 20:17:24] 2025-04-08 00:16:51,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 20:17:24] 2025-04-08 00:16:54,187 | INFO     | monitor loop #2462: job 0:6592224658 is in state 'finished'
[2025-04-07 20:17:24] 2025-04-08 00:16:54,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 20:17:24] 2025-04-08 00:16:55,955 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-07 20:17:24] 2025-04-08 00:16:55,956 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6592224658/memory_monitor_summary.json (trf name=prmon)
[2025-04-07 20:17:24] 2025-04-08 00:16:55,958 | INFO     | extracted standard info from prmon json
[2025-04-07 20:17:24] 2025-04-08 00:16:55,990 | INFO     | extracted standard memory fields from prmon json
[2025-04-07 20:17:24] 2025-04-08 00:16:55,990 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-07 20:17:24] 2025-04-08 00:16:56,054 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-07 20:17:24] 2025-04-08 00:16:56,055 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-07 20:17:24] 2025-04-08 00:16:56,743 | INFO     | monitor loop #2463: job 0:6592224658 is in state 'finished'
[2025-04-07 20:17:24] 2025-04-08 00:16:56,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 20:17:24] 2025-04-08 00:16:56,822 | INFO     | fitting pss+swap vs Time
[2025-04-07 20:17:24] 2025-04-08 00:16:56,953 | INFO     | sum of square deviations: 492828423733.8201
[2025-04-07 20:17:24] 2025-04-08 00:16:58,242 | INFO     | sum of deviations: 2061101880321.3923
[2025-04-07 20:17:24] 2025-04-08 00:16:58,243 | INFO     | mean x: 1744035731.6092546
[2025-04-07 20:17:24] 2025-04-08 00:16:58,282 | INFO     | mean y: 2332755.796915167
[2025-04-07 20:17:24] 2025-04-08 00:16:58,283 | INFO     | -- intersect: -7291555243.871335
[2025-04-07 20:17:24] 2025-04-08 00:16:58,283 | INFO     | intersect: -7291555243.871335
[2025-04-07 20:17:24] 2025-04-08 00:16:58,328 | INFO     | chi2: 19.180227165769136
[2025-04-07 20:17:24] 2025-04-08 00:16:58,375 | INFO     | sum of square deviations: 486521613133.3158
[2025-04-07 20:17:24] 2025-04-08 00:16:59,012 | INFO     | sum of deviations: 2402759865017.7495
[2025-04-07 20:17:24] 2025-04-08 00:16:59,031 | INFO     | mean x: 1744035579.116179
[2025-04-07 20:17:24] 2025-04-08 00:16:59,031 | INFO     | mean y: 2341016.8537005163
[2025-04-07 20:17:24] 2025-04-08 00:16:59,032 | INFO     | -- intersect: -8610839938.614088
[2025-04-07 20:17:24] 2025-04-08 00:16:59,032 | INFO     | intersect: -8610839938.614088
[2025-04-07 20:17:24] 2025-04-08 00:16:59,060 | INFO     | chi2: 15.741873731871491
[2025-04-07 20:17:24] 2025-04-08 00:16:59,061 | INFO     | current chi2=15.741873731871491 (change=17.926552194512368 %)
[2025-04-07 20:17:24] 2025-04-08 00:16:59,061 | INFO     | right removable region: 1161
[2025-04-07 20:17:24] 2025-04-08 00:16:59,084 | INFO     | sum of square deviations: 486520538498.5478
[2025-04-07 20:17:24] 2025-04-08 00:16:59,367 | INFO     | monitor loop #2464: job 0:6592224658 is in state 'finished'
[2025-04-07 20:17:24] 2025-04-08 00:16:59,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 20:17:24] 2025-04-08 00:16:59,574 | INFO     | sum of deviations: 1692517511363.0723
[2025-04-07 20:17:24] 2025-04-08 00:16:59,575 | INFO     | mean x: 1744035884.1153183
[2025-04-07 20:17:24] 2025-04-08 00:16:59,575 | INFO     | mean y: 2341665.484509466
[2025-04-07 20:17:24] 2025-04-08 00:16:59,576 | INFO     | -- intersect: -6064845720.726042
[2025-04-07 20:17:24] 2025-04-08 00:16:59,576 | INFO     | intersect: -6064845720.726042
[2025-04-07 20:17:24] 2025-04-08 00:16:59,598 | INFO     | chi2: 15.049852540969166
[2025-04-07 20:17:24] 2025-04-08 00:16:59,599 | INFO     | current chi2=15.049852540969166 (change=21.534544868016113 %)
[2025-04-07 20:17:24] 2025-04-08 00:16:59,599 | INFO     | left removable region: 10
[2025-04-07 20:17:24] 2025-04-08 00:16:59,668 | INFO     | sum of square deviations: 472834470417.10297
[2025-04-07 20:17:24] 2025-04-08 00:17:00,096 | INFO     | sum of deviations: 1803922455348.291
[2025-04-07 20:17:24] 2025-04-08 00:17:00,115 | INFO     | mean x: 1744035853.6272807
[2025-04-07 20:17:24] 2025-04-08 00:17:00,115 | INFO     | mean y: 2359048.271068636
[2025-04-07 20:17:24] 2025-04-08 00:17:00,116 | INFO     | -- intersect: -6651355171.2432
[2025-04-07 20:17:24] 2025-04-08 00:17:00,116 | INFO     | intersect: -6651355171.2432
[2025-04-07 20:17:24] 2025-04-08 00:17:00,139 | INFO     | chi2: 8.247173469650065
[2025-04-07 20:17:24] 2025-04-08 00:17:00,140 | INFO     | -- intersect: -6651355171.2432
[2025-04-07 20:17:24] 2025-04-08 00:17:00,140 | INFO     | current memory leak: 3.82 B/s (using 1151 data points, chi2=8.25)
[2025-04-07 20:17:24] 2025-04-08 00:17:00,162 | INFO     | ..............................
[2025-04-07 20:17:24] 2025-04-08 00:17:00,181 | INFO     | . Timing measurements:
[2025-04-07 20:17:24] 2025-04-08 00:17:00,181 | INFO     | . get job = 2 s
[2025-04-07 20:17:24] 2025-04-08 00:17:00,182 | INFO     | . initial setup = 10 s
[2025-04-07 20:17:24] 2025-04-08 00:17:00,182 | INFO     | . payload setup = 74 s
[2025-04-07 20:17:24] 2025-04-08 00:17:00,182 | INFO     | . stage-in = 1 s
[2025-04-07 20:17:24] 2025-04-08 00:17:00,182 | INFO     | . payload execution = 71200 s
[2025-04-07 20:17:24] 2025-04-08 00:17:00,182 | INFO     | . stage-out = 30 s
[2025-04-07 20:17:24] 2025-04-08 00:17:00,183 | INFO     | . log creation = 4 s
[2025-04-07 20:17:24] 2025-04-08 00:17:00,183 | INFO     | ..............................
[2025-04-07 20:17:24] 2025-04-08 00:17:01,111 | INFO     | 
[2025-04-07 20:17:24] 2025-04-08 00:17:01,112 | INFO     | job summary report
[2025-04-07 20:17:24] 2025-04-08 00:17:01,112 | INFO     | --------------------------------------------------
[2025-04-07 20:17:24] 2025-04-08 00:17:01,112 | INFO     | PanDA job id: 6592224658
[2025-04-07 20:17:24] 2025-04-08 00:17:01,112 | INFO     | task id: 43996535
[2025-04-07 20:17:24] 2025-04-08 00:17:01,113 | INFO     | errors: (none)
[2025-04-07 20:17:24] 2025-04-08 00:17:01,113 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-07 20:17:24] 2025-04-08 00:17:01,113 | INFO     | pilot state: finished 
[2025-04-07 20:17:24] 2025-04-08 00:17:01,113 | INFO     | transexitcode: 0
[2025-04-07 20:17:24] 2025-04-08 00:17:01,114 | INFO     | exeerrorcode: 0
[2025-04-07 20:17:24] 2025-04-08 00:17:01,114 | INFO     | exeerrordiag: 
[2025-04-07 20:17:24] 2025-04-08 00:17:01,114 | INFO     | exitcode: 0
[2025-04-07 20:17:24] 2025-04-08 00:17:01,114 | INFO     | exitmsg: OK
[2025-04-07 20:17:24] 2025-04-08 00:17:01,119 | INFO     | cpuconsumptiontime: 139907 s
[2025-04-07 20:17:24] 2025-04-08 00:17:01,119 | INFO     | nevents: 400
[2025-04-07 20:17:24] 2025-04-08 00:17:01,120 | INFO     | neventsw: 0
[2025-04-07 20:17:24] 2025-04-08 00:17:01,120 | INFO     | pid: 64108
[2025-04-07 20:17:24] 2025-04-08 00:17:01,120 | INFO     | pgrp: 64108
[2025-04-07 20:17:24] 2025-04-08 00:17:01,120 | INFO     | corecount: 8
[2025-04-07 20:17:24] 2025-04-08 00:17:01,121 | INFO     | event service: False
[2025-04-07 20:17:24] 2025-04-08 00:17:01,121 | INFO     | sizes: {0: 2416573, 3: 2417174, 5: 2417258, 8: 2417342, 9: 2417342, 11: 2417513, 12: 2417669, 26: 2417697, 39: 2417725, 51: 2417753, 64: 2417781, 67: 2418323, 77: 
[2025-04-07 20:17:24] 2025-04-08 00:17:01,121 | INFO     | --------------------------------------------------
[2025-04-07 20:17:24] 2025-04-08 00:17:01,121 | INFO     | 
[2025-04-07 20:17:24] 2025-04-08 00:17:01,122 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-04-07 20:17:24] 2025-04-08 00:17:01,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,571 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,572 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,572 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,580 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,581 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,581 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-07 20:17:24] 2025-04-08 00:17:01,581 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,581 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-07 20:17:24] 2025-04-08 00:17:01,582 | INFO     | job 6592224658 has completed (purged errors)
[2025-04-07 20:17:24] 2025-04-08 00:17:01,582 | INFO     | overall cleanup function is called
[2025-04-07 20:17:24] 2025-04-08 00:17:02,600 | INFO     | --- collectZombieJob: --- 10, [64108]
[2025-04-07 20:17:24] 2025-04-08 00:17:02,600 | INFO     | zombie collector waiting for pid 64108
[2025-04-07 20:17:24] 2025-04-08 00:17:02,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-07 20:17:24] 2025-04-08 00:17:02,601 | INFO     | collected zombie processes
[2025-04-07 20:17:24] 2025-04-08 00:17:02,601 | INFO     | will attempt to kill all subprocesses of pid=64108
[2025-04-07 20:17:24] 2025-04-08 00:17:06,138 | INFO     | process IDs to be killed: [64108] (in reverse order)
[2025-04-07 20:17:24] 2025-04-08 00:17:07,443 | WARNING  | found no corresponding commands to process id(s)
[2025-04-07 20:17:24] 2025-04-08 00:17:07,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-07 20:17:24] 2025-04-08 00:17:07,794 | INFO     | did not find any defunct processes belonging to 64108
[2025-04-07 20:17:24] 2025-04-08 00:17:08,274 | INFO     | did not find any defunct processes belonging to 64108
[2025-04-07 20:17:24] 2025-04-08 00:17:08,275 | INFO     | ready for new job
[2025-04-07 20:17:24] 2025-04-08 00:17:08,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-07 20:17:24] 2025-04-08 00:17:08,369 | INFO     | **************************************
[2025-04-07 20:17:24] 2025-04-08 00:17:08,370 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-07 20:17:24] 2025-04-08 00:17:08,370 | INFO     | **************************************
[2025-04-07 20:17:24] 2025-04-08 00:17:08,370 | INFO     | 
[2025-04-07 20:17:24] 2025-04-08 00:17:08,595 | INFO     | architecture information:
[2025-04-07 20:17:24] 2025-04-08 00:17:08,609 | INFO     | executing command: cat /etc/os-release
[2025-04-07 20:17:24] 2025-04-08 00:17:08,811 | INFO     | cat /etc/os-release:
[2025-04-07 20:17:24] NAME="CentOS Linux"
[2025-04-07 20:17:24] VERSION="7 (Core)"
[2025-04-07 20:17:24] ID="centos"
[2025-04-07 20:17:24] ID_LIKE="rhel fedora"
[2025-04-07 20:17:24] VERSION_ID="7"
[2025-04-07 20:17:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-07 20:17:24] ANSI_COLOR="0;31"
[2025-04-07 20:17:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-07 20:17:24] HOME_URL="https://www.centos.org/"
[2025-04-07 20:17:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-07 20:17:24] 
[2025-04-07 20:17:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-07 20:17:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-07 20:17:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-07 20:17:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-07 20:17:24] 
[2025-04-07 20:17:24] 2025-04-08 00:17:08,812 | INFO     | **************************************
[2025-04-07 20:17:24] 2025-04-08 00:17:09,315 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-04-07 20:17:24] 2025-04-08 00:17:09,457 | INFO     | sufficient remaining disk space (71617740800 B)
[2025-04-07 20:17:24] 2025-04-08 00:17:09,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-07 20:17:24] 2025-04-08 00:17:09,459 | INFO     | current server update state: UPDATING_FINAL
[2025-04-07 20:17:24] 2025-04-08 00:17:09,459 | INFO     | update_server=False
[2025-04-07 20:17:24] 2025-04-08 00:17:09,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-07 20:17:24] 2025-04-08 00:17:09,567 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-07 20:17:24] 2025-04-08 00:17:09,569 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-07 20:17:24] 2025-04-08 00:17:09,570 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-07 20:17:24] 2025-04-08 00:17:09,570 | INFO     | will abort loop
[2025-04-07 20:17:24] 2025-04-08 00:17:09,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-07 20:17:24] 2025-04-08 00:17:09,767 | INFO     | found 0 job(s) in 20 queues
[2025-04-07 20:17:24] 2025-04-08 00:17:09,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-07 20:17:24] 2025-04-08 00:17:09,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-07 20:17:24] 2025-04-08 00:17:09,793 | INFO     | all data control threads have been joined
[2025-04-07 20:17:24] 2025-04-08 00:17:09,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-07 20:17:24] 2025-04-08 00:17:10,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-07 20:17:24] 2025-04-08 00:17:10,415 | INFO     | all payload control threads have been joined
[2025-04-07 20:17:24] 2025-04-08 00:17:10,470 | INFO     | [job] retrieve thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:10,576 | INFO     | [job] job monitor thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:10,786 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:10,787 | INFO     | [payload] execute_payloads thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:10,788 | INFO     | [job] create_data_payload thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:10,793 | INFO     | [payload] validate_post thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:10,799 | INFO     | [data] control thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:10,902 | INFO     | [data] copytool_in thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:10,938 | INFO     | [job] queue monitor thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:11,023 | INFO     | all job control threads have been joined
[2025-04-07 20:17:24] 2025-04-08 00:17:11,120 | INFO     | [job] validate thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:11,421 | INFO     | [payload] control thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:11,561 | INFO     | [payload] failed_post thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:11,692 | INFO     | [data] copytool_out thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:11,785 | INFO     | [payload] validate_pre thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:12,029 | INFO     | [job] control thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:14,277 | INFO     | [data] queue_monitor thread has finished
[2025-04-07 20:17:24] 2025-04-08 00:17:15,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871497324352)>', '<ExcThread(monitor, started 139870995453696)>']
[2025-04-07 20:17:24] 2025-04-08 00:17:15,814 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-07 20:17:24] 2025-04-08 00:17:15,815 | INFO     | [monitor] control thread has ended
[2025-04-07 20:17:24] 2025-04-08 00:17:20,552 | INFO     | all workflow threads have been joined
[2025-04-07 20:17:24] 2025-04-08 00:17:20,552 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-07 20:17:24] 2025-04-08 00:17:20,553 | INFO     | traces error code: 0
[2025-04-07 20:17:24] 2025-04-08 00:17:20,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-07 20:17:24] 2025-04-08 00:17:21,463 [wrapper] ==== pilot stdout END ====
[2025-04-07 20:17:24] 2025-04-08 00:17:21,486 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-07 20:17:24] 2025-04-08 00:17:21,530 [wrapper] pilotpid: 28856
[2025-04-07 20:17:24] 2025-04-08 00:17:21,584 [wrapper] Pilot exit status: 0
[2025-04-07 20:17:24] 2025-04-08 00:17:21,816 [wrapper] pandaids: 6592224658
[2025-04-07 20:17:24] 2025-04-08 00:17:22,665 [wrapper] cleanup supervisor_pilot  521823 28857
[2025-04-07 20:17:24] 2025-04-08 00:17:22,771 [wrapper] Test setup, not cleaning
[2025-04-07 20:17:24] 2025-04-08 00:17:22,789 [wrapper] apfmon messages muted
[2025-04-07 20:17:24] 2025-04-08 00:17:22,846 [wrapper] ==== wrapper stdout END ====
[2025-04-07 20:17:24] 2025-04-08 00:17:22,868 [wrapper] ==== wrapper stderr END ====
[2025-04-07 20:17:24]  *** Error codes and diagnostics ***
[2025-04-07 20:17:24]     "exeErrorCode": 0,
[2025-04-07 20:17:24]     "exeErrorDiag": "",
[2025-04-07 20:17:24]     "pilotErrorCode": 0,
[2025-04-07 20:17:24]     "pilotErrorDiag": "",
[2025-04-07 20:17:24]  *** Listing of results directory ***
[2025-04-07 20:17:24] total 588840
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas    495897 Apr  7 00:21 pilot3.tar.gz
[2025-04-07 20:17:24] -rwx------. 1 boincer umatlas     37140 Apr  7 00:21 runpilot2-wrapper.sh
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas      5111 Apr  7 00:21 queuedata.json
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas       100 Apr  7 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-07 20:17:24] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  7 00:22 run_atlas
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas       105 Apr  7 00:22 job.xml
[2025-04-07 20:17:24] -rw-r--r--. 2 boincer umatlas 354221795 Apr  7 00:23 EVNT.43996531._000003.pool.root.1
[2025-04-07 20:17:24] -rw-r--r--. 2 boincer umatlas     17569 Apr  7 00:23 start_atlas.sh
[2025-04-07 20:17:24] drwxrwx--x. 2 boincer umatlas      4096 Apr  7 00:23 shared
[2025-04-07 20:17:24] -rw-r--r--. 2 boincer umatlas    508880 Apr  7 00:23 input.tar.gz
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas         0 Apr  7 00:23 boinc_lockfile
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas      2613 Apr  7 00:23 pandaJob.out
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas       467 Apr  7 00:23 setup.sh.local
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas    979671 Apr  7 00:24 agis_schedconf.cvmfs.json
[2025-04-07 20:17:24] drwx------. 4 boincer umatlas      4096 Apr  7 00:25 pilot3
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas 235115575 Apr  7 20:07 HITS.43996535._000062.pool.root.1
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas       532 Apr  7 20:08 boinc_task_state.xml
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas      6857 Apr  7 20:13 init_data.xml
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas      1056 Apr  7 20:15 memory_monitor_summary.json
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas   1603526 Apr  7 20:15 agis_ddmendpoints.agis.ALL.json
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas    852588 Apr  7 20:15 log.43996535._000062.job.log.tgz.1
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas      7750 Apr  7 20:17 heartbeat.json
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas        95 Apr  7 20:17 pilot_heartbeat.json
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas      4539 Apr  7 20:17 pilotlog.txt
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas   4044915 Apr  7 20:17 log.43996535._000062.job.log.1
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas       357 Apr  7 20:17 output.list
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas       620 Apr  7 20:17 runtime_log
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas      8192 Apr  7 20:17 boinc_mmap_file
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas   4915200 Apr  7 20:17 result.tar.gz
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas        29 Apr  7 20:17 wrapper_checkpoint.txt
[2025-04-07 20:17:24] -rw-------. 1 boincer umatlas       667 Apr  7 20:17 PSWLDmUAtL7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmIvILDmLWifSn.diag
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas     11429 Apr  7 20:17 runtime_log.err
[2025-04-07 20:17:24] -rw-r--r--. 1 boincer umatlas     21503 Apr  7 20:17 stderr.txt
[2025-04-07 20:17:25] HITS file was successfully produced:
[2025-04-07 20:17:25] -rw-------. 1 boincer umatlas 235115575 Apr  7 20:07 shared/HITS.pool.root.1
[2025-04-07 20:17:25]  *** Contents of shared directory: ***
[2025-04-07 20:17:25] total 580856
[2025-04-07 20:17:25] -rw-r--r--. 2 boincer umatlas 354221795 Apr  7 00:23 ATLAS.root_0
[2025-04-07 20:17:25] -rw-r--r--. 2 boincer umatlas     17569 Apr  7 00:23 start_atlas.sh
[2025-04-07 20:17:25] -rw-r--r--. 2 boincer umatlas    508880 Apr  7 00:23 input.tar.gz
[2025-04-07 20:17:25] -rw-------. 1 boincer umatlas 235115575 Apr  7 20:07 HITS.pool.root.1
[2025-04-07 20:17:25] -rw-------. 1 boincer umatlas   4915200 Apr  7 20:17 result.tar.gz
20:17:46 (11100): run_atlas exited; CPU time 145626.729460
20:17:46 (11100): called boinc_finish(0)

</stderr_txt>
]]>

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