Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:11:01 (446694): wrapper (7.7.26015): starting
15:11:01 (446694): wrapper: running run_atlas (--nthreads 9)
[2025-04-06 15:11:01] Arguments: --nthreads 9
[2025-04-06 15:11:01] Threads: 9
[2025-04-06 15:11:01] Checking for CVMFS
[2025-04-06 15:11:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-06 15:11:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-06 15:11:01] Running cvmfs_config stat atlas.cern.ch
[2025-04-06 15:11:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-06 15:11:02] 2.12.6.0 3556684 116683 274748 144573 1 470 31771161 40960001 10577 130560 0 35453401 99.701 31436485 24855 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-06 15:11:02] CVMFS is ok
[2025-04-06 15:11:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-06 15:11:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-06 15:11:02] Further information can be found at the LHC@home message board.
[2025-04-06 15:11:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-06 15:11:02] Checking for apptainer binary...
[2025-04-06 15:11:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-06 15:11:02] Running /usr/bin/apptainer --version
[2025-04-06 15:11:02] apptainer version 1.4.0-1.el9
[2025-04-06 15:11:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-06 15:11:02] c6-8-12-4.aglt2.org
[2025-04-06 15:11:02] apptainer works
[2025-04-06 15:11:02] Set ATHENA_PROC_NUMBER=9
[2025-04-06 15:11:02] Set ATHENA_CORE_NUMBER=9
[2025-04-06 15:11:02] Starting ATLAS job with PandaID=6586398949
[2025-04-06 15:11:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-06 18:08:06]  *** The last 200 lines of the pilot log: ***
[2025-04-06 18:08:06] 2025-04-06 22:07:49,646 | INFO     | sum of square deviations: 1633465961.4942548
[2025-04-06 18:08:06] 2025-04-06 22:07:49,647 | INFO     | sum of deviations: 71001217893.3678
[2025-04-06 18:08:06] 2025-04-06 22:07:49,647 | INFO     | mean x: 1743971980.505747
[2025-04-06 18:08:06] 2025-04-06 22:07:49,647 | INFO     | mean y: 2505551.132183908
[2025-04-06 18:08:06] 2025-04-06 22:07:49,647 | INFO     | -- intersect: -75802033696.5332
[2025-04-06 18:08:06] 2025-04-06 22:07:49,647 | INFO     | intersect: -75802033696.5332
[2025-04-06 18:08:06] 2025-04-06 22:07:49,648 | INFO     | chi2: 6.072386830687537
[2025-04-06 18:08:06] 2025-04-06 22:07:49,648 | INFO     | sum of square deviations: 1496654398.9940875
[2025-04-06 18:08:06] 2025-04-06 22:07:49,649 | INFO     | sum of deviations: 80567274585.37277
[2025-04-06 18:08:06] 2025-04-06 22:07:49,649 | INFO     | mean x: 1743971828.005917
[2025-04-06 18:08:06] 2025-04-06 22:07:49,649 | INFO     | mean y: 2515920.6272189347
[2025-04-06 18:08:06] 2025-04-06 22:07:49,649 | INFO     | -- intersect: -93878247220.51149
[2025-04-06 18:08:06] 2025-04-06 22:07:49,649 | INFO     | intersect: -93878247220.51149
[2025-04-06 18:08:06] 2025-04-06 22:07:49,649 | INFO     | chi2: 5.395993279043686
[2025-04-06 18:08:06] 2025-04-06 22:07:49,649 | INFO     | current chi2=5.395993279043686 (change=11.138841620326547 %)
[2025-04-06 18:08:06] 2025-04-06 22:07:49,649 | INFO     | right removable region: 168
[2025-04-06 18:08:06] 2025-04-06 22:07:49,650 | INFO     | sum of square deviations: 1496653788.9940875
[2025-04-06 18:08:06] 2025-04-06 22:07:49,650 | INFO     | sum of deviations: 28496147157.53257
[2025-04-06 18:08:06] 2025-04-06 22:07:49,650 | INFO     | mean x: 1743972133.005917
[2025-04-06 18:08:06] 2025-04-06 22:07:49,651 | INFO     | mean y: 2552752.4674556213
[2025-04-06 18:08:06] 2025-04-06 22:07:49,651 | INFO     | -- intersect: -33202512377.6412
[2025-04-06 18:08:06] 2025-04-06 22:07:49,651 | INFO     | intersect: -33202512377.6412
[2025-04-06 18:08:06] 2025-04-06 22:07:49,651 | INFO     | chi2: 3.5731074509432013
[2025-04-06 18:08:06] 2025-04-06 22:07:49,651 | INFO     | current chi2=3.5731074509432013 (change=41.158105526379295 %)
[2025-04-06 18:08:06] 2025-04-06 22:07:49,651 | INFO     | sum of square deviations: 1367702228.9939044
[2025-04-06 18:08:06] 2025-04-06 22:07:49,652 | INFO     | sum of deviations: -9698172239.67073
[2025-04-06 18:08:06] 2025-04-06 22:07:49,652 | INFO     | mean x: 1743972285.5060976
[2025-04-06 18:08:06] 2025-04-06 22:07:49,652 | INFO     | mean y: 2597926.6707317075
[2025-04-06 18:08:06] 2025-04-06 22:07:49,652 | INFO     | -- intersect: 12368844941.192293
[2025-04-06 18:08:06] 2025-04-06 22:07:49,652 | INFO     | intersect: 12368844941.192293
[2025-04-06 18:08:06] 2025-04-06 22:07:49,653 | INFO     | chi2: 1.7077417996714095
[2025-04-06 18:08:06] 2025-04-06 22:07:49,653 | INFO     | current chi2=1.7077417996714095 (change=52.205697054517266 %)
[2025-04-06 18:08:06] 2025-04-06 22:07:49,653 | INFO     | sum of square deviations: 1246378718.9937139
[2025-04-06 18:08:06] 2025-04-06 22:07:49,654 | INFO     | sum of deviations: -33315819586.641502
[2025-04-06 18:08:06] 2025-04-06 22:07:49,654 | INFO     | mean x: 1743972438.0062892
[2025-04-06 18:08:06] 2025-04-06 22:07:49,654 | INFO     | mean y: 2627369.6415094337
[2025-04-06 18:08:06] 2025-04-06 22:07:49,654 | INFO     | -- intersect: 46619173547.19696
[2025-04-06 18:08:06] 2025-04-06 22:07:49,654 | INFO     | intersect: 46619173547.19696
[2025-04-06 18:08:06] 2025-04-06 22:07:49,654 | INFO     | chi2: 0.7968040270302156
[2025-04-06 18:08:06] 2025-04-06 22:07:49,655 | INFO     | current chi2=0.7968040270302156 (change=53.341656965735076 %)
[2025-04-06 18:08:06] 2025-04-06 22:07:49,655 | INFO     | sum of square deviations: 1132450696.493509
[2025-04-06 18:08:06] 2025-04-06 22:07:49,656 | INFO     | sum of deviations: -34064881940.311684
[2025-04-06 18:08:06] 2025-04-06 22:07:49,656 | INFO     | mean x: 1743972590.5064936
[2025-04-06 18:08:06] 2025-04-06 22:07:49,656 | INFO     | mean y: 2628297.811688312
[2025-04-06 18:08:06] 2025-04-06 22:07:49,656 | INFO     | -- intersect: 52462501903.51771
[2025-04-06 18:08:06] 2025-04-06 22:07:49,656 | INFO     | intersect: 52462501903.51771
[2025-04-06 18:08:06] 2025-04-06 22:07:49,656 | INFO     | chi2: 0.7667047931728157
[2025-04-06 18:08:06] 2025-04-06 22:07:49,656 | INFO     | current chi2=0.7667047931728157 (change=3.7774951978572875 %)
[2025-04-06 18:08:06] 2025-04-06 22:07:49,656 | INFO     | left removable region: 40
[2025-04-06 18:08:06] 2025-04-06 22:07:49,657 | INFO     | sum of square deviations: 650252192.0
[2025-04-06 18:08:06] 2025-04-06 22:07:49,657 | INFO     | sum of deviations: -13396831559.5
[2025-04-06 18:08:06] 2025-04-06 22:07:49,657 | INFO     | mean x: 1743973017.5
[2025-04-06 18:08:06] 2025-04-06 22:07:49,657 | INFO     | mean y: 2628534.9921875
[2025-04-06 18:08:06] 2025-04-06 22:07:49,657 | INFO     | -- intersect: 35932861523.365486
[2025-04-06 18:08:06] 2025-04-06 22:07:49,658 | INFO     | intersect: 35932861523.365486
[2025-04-06 18:08:06] 2025-04-06 22:07:49,658 | INFO     | chi2: 0.04749477654996486
[2025-04-06 18:08:06] 2025-04-06 22:07:49,658 | INFO     | -- intersect: 35932861523.365486
[2025-04-06 18:08:06] 2025-04-06 22:07:49,658 | INFO     | current memory leak: -20.60 B/s (using 128 data points, chi2=0.05)
[2025-04-06 18:08:06] 2025-04-06 22:07:49,659 | INFO     | ..............................
[2025-04-06 18:08:06] 2025-04-06 22:07:49,659 | INFO     | . Timing measurements:
[2025-04-06 18:08:06] 2025-04-06 22:07:49,659 | INFO     | . get job = 0 s
[2025-04-06 18:08:06] 2025-04-06 22:07:49,659 | INFO     | . initial setup = 3 s
[2025-04-06 18:08:06] 2025-04-06 22:07:49,659 | INFO     | . payload setup = 7 s
[2025-04-06 18:08:06] 2025-04-06 22:07:49,659 | INFO     | . stage-in = 0 s
[2025-04-06 18:08:06] 2025-04-06 22:07:49,659 | INFO     | . payload execution = 10559 s
[2025-04-06 18:08:06] 2025-04-06 22:07:49,659 | INFO     | . stage-out = 0 s
[2025-04-06 18:08:06] 2025-04-06 22:07:49,660 | INFO     | . log creation = 0 s
[2025-04-06 18:08:06] 2025-04-06 22:07:49,660 | INFO     | ..............................
[2025-04-06 18:08:06] 2025-04-06 22:07:49,751 | INFO     | 
[2025-04-06 18:08:06] 2025-04-06 22:07:49,751 | INFO     | job summary report
[2025-04-06 18:08:06] 2025-04-06 22:07:49,751 | INFO     | --------------------------------------------------
[2025-04-06 18:08:06] 2025-04-06 22:07:49,751 | INFO     | PanDA job id: 6586398949
[2025-04-06 18:08:06] 2025-04-06 22:07:49,751 | INFO     | task id: 43634898
[2025-04-06 18:08:06] 2025-04-06 22:07:49,751 | INFO     | errors: (none)
[2025-04-06 18:08:06] 2025-04-06 22:07:49,751 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | pilot state: finished 
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | transexitcode: 0
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | exeerrorcode: 0
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | exeerrordiag: 
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | exitcode: 0
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | exitmsg: OK
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | cpuconsumptiontime: 73537 s
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | nevents: 400
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | neventsw: 0
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | pid: 457349
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | pgrp: 457349
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | corecount: 9
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | event service: False
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | sizes: {0: 2417229, 1: 2417428, 5: 2417634, 11: 2417690, 10571: 2446420, 10572: 2446419, 10573: 2455600, 10579: 2455714}
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | --------------------------------------------------
[2025-04-06 18:08:06] 2025-04-06 22:07:49,752 | INFO     | 
[2025-04-06 18:08:06] 2025-04-06 22:07:49,753 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-06 18:08:06] 2025-04-06 22:07:49,774 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,774 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,774 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,774 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-06 18:08:06] 2025-04-06 22:07:49,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,776 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-06 18:08:06] 2025-04-06 22:07:49,776 | INFO     | job 6586398949 has completed (purged errors)
[2025-04-06 18:08:06] 2025-04-06 22:07:49,776 | INFO     | overall cleanup function is called
[2025-04-06 18:08:06] 2025-04-06 22:07:50,784 | INFO     | --- collectZombieJob: --- 10, [457349]
[2025-04-06 18:08:06] 2025-04-06 22:07:50,784 | INFO     | zombie collector waiting for pid 457349
[2025-04-06 18:08:06] 2025-04-06 22:07:50,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-06 18:08:06] 2025-04-06 22:07:50,784 | INFO     | collected zombie processes
[2025-04-06 18:08:06] 2025-04-06 22:07:50,784 | INFO     | will attempt to kill all subprocesses of pid=457349
[2025-04-06 18:08:06] 2025-04-06 22:07:51,060 | INFO     | process IDs to be killed: [457349] (in reverse order)
[2025-04-06 18:08:06] 2025-04-06 22:07:51,128 | WARNING  | found no corresponding commands to process id(s)
[2025-04-06 18:08:06] 2025-04-06 22:07:51,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-06 18:08:06] 2025-04-06 22:07:51,138 | INFO     | did not find any defunct processes belonging to 457349
[2025-04-06 18:08:06] 2025-04-06 22:07:51,149 | INFO     | did not find any defunct processes belonging to 457349
[2025-04-06 18:08:06] 2025-04-06 22:07:51,149 | INFO     | ready for new job
[2025-04-06 18:08:06] 2025-04-06 22:07:51,149 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-06 18:08:06] 2025-04-06 22:07:51,151 | INFO     | **************************************
[2025-04-06 18:08:06] 2025-04-06 22:07:51,152 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-06 18:08:06] 2025-04-06 22:07:51,152 | INFO     | **************************************
[2025-04-06 18:08:06] 2025-04-06 22:07:51,152 | INFO     | 
[2025-04-06 18:08:06] 2025-04-06 22:07:51,167 | INFO     | architecture information:
[2025-04-06 18:08:06] 2025-04-06 22:07:51,167 | INFO     | executing command: cat /etc/os-release
[2025-04-06 18:08:06] 2025-04-06 22:07:51,182 | INFO     | cat /etc/os-release:
[2025-04-06 18:08:06] NAME="CentOS Linux"
[2025-04-06 18:08:06] VERSION="7 (Core)"
[2025-04-06 18:08:06] ID="centos"
[2025-04-06 18:08:06] ID_LIKE="rhel fedora"
[2025-04-06 18:08:06] VERSION_ID="7"
[2025-04-06 18:08:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-06 18:08:06] ANSI_COLOR="0;31"
[2025-04-06 18:08:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-06 18:08:06] HOME_URL="https://www.centos.org/"
[2025-04-06 18:08:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-06 18:08:06] 
[2025-04-06 18:08:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-06 18:08:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-06 18:08:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-06 18:08:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-06 18:08:06] 
[2025-04-06 18:08:06] 2025-04-06 22:07:51,183 | INFO     | **************************************
[2025-04-06 18:08:06] 2025-04-06 22:07:51,685 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-06 18:08:06] 2025-04-06 22:07:51,705 | INFO     | sufficient remaining disk space (55967744000 B)
[2025-04-06 18:08:06] 2025-04-06 22:07:51,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-06 18:08:06] 2025-04-06 22:07:51,705 | INFO     | current server update state: UPDATING_FINAL
[2025-04-06 18:08:06] 2025-04-06 22:07:51,705 | INFO     | update_server=False
[2025-04-06 18:08:06] 2025-04-06 22:07:51,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-06 18:08:06] 2025-04-06 22:07:51,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-06 18:08:06] 2025-04-06 22:07:51,736 | INFO     | all payload control threads have been joined
[2025-04-06 18:08:06] 2025-04-06 22:07:51,824 | INFO     | all data control threads have been joined
[2025-04-06 18:08:06] 2025-04-06 22:07:51,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-06 18:08:06] 2025-04-06 22:07:52,027 | INFO     | found 0 job(s) in 20 queues
[2025-04-06 18:08:06] 2025-04-06 22:07:52,027 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-06 18:08:06] 2025-04-06 22:07:52,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-06 18:08:06] 2025-04-06 22:07:52,136 | INFO     | all job control threads have been joined
[2025-04-06 18:08:06] 2025-04-06 22:07:52,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-06 18:08:06] 2025-04-06 22:07:52,476 | INFO     | aborting loop
[2025-04-06 18:08:06] 2025-04-06 22:07:52,710 | INFO     | [job] retrieve thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:52,711 | INFO     | [job] queue monitor thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:52,716 | INFO     | [payload] failed_post thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:52,741 | INFO     | [payload] control thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:52,815 | INFO     | [job] validate thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:52,827 | INFO     | [data] control thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:53,090 | INFO     | [payload] validate_pre thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:53,141 | INFO     | [job] control thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:53,230 | INFO     | [data] copytool_in thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:53,369 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:53,437 | INFO     | [payload] validate_post thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:53,481 | INFO     | [job] job monitor thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:53,730 | INFO     | [payload] execute_payloads thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:53,744 | INFO     | [job] create_data_payload thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:53,867 | INFO     | [data] copytool_out thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:07:54,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-06 18:08:06] 2025-04-06 22:07:58,844 | INFO     | [data] queue_monitor thread has finished
[2025-04-06 18:08:06] 2025-04-06 22:08:00,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139621571868480)>', '<ExcThread(monitor, started 139620855572224)>']
[2025-04-06 18:08:06] 2025-04-06 22:08:01,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-06 18:08:06] 2025-04-06 22:08:01,075 | INFO     | [monitor] control thread has ended
[2025-04-06 18:08:06] 2025-04-06 22:08:05,860 | INFO     | all workflow threads have been joined
[2025-04-06 18:08:06] 2025-04-06 22:08:05,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-06 18:08:06] 2025-04-06 22:08:05,861 | INFO     | traces error code: 0
[2025-04-06 18:08:06] 2025-04-06 22:08:05,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-06 18:08:06] 2025-04-06 22:08:06,029 [wrapper] ==== pilot stdout END ====
[2025-04-06 18:08:06] 2025-04-06 22:08:06,032 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-06 18:08:06] 2025-04-06 22:08:06,035 [wrapper] pilotpid: 450426
[2025-04-06 18:08:06] 2025-04-06 22:08:06,039 [wrapper] Pilot exit status: 0
[2025-04-06 18:08:06] 2025-04-06 22:08:06,049 [wrapper] pandaids: 6586398949
[2025-04-06 18:08:06] 2025-04-06 22:08:06,130 [wrapper] cleanup supervisor_pilot 1090445 450427
[2025-04-06 18:08:06] 2025-04-06 22:08:06,133 [wrapper] Test setup, not cleaning
[2025-04-06 18:08:06] 2025-04-06 22:08:06,136 [wrapper] apfmon messages muted
[2025-04-06 18:08:06] 2025-04-06 22:08:06,138 [wrapper] ==== wrapper stdout END ====
[2025-04-06 18:08:06] 2025-04-06 22:08:06,141 [wrapper] ==== wrapper stderr END ====
[2025-04-06 18:08:06]  *** Error codes and diagnostics ***
[2025-04-06 18:08:06]     "exeErrorCode": 0,
[2025-04-06 18:08:06]     "exeErrorDiag": "",
[2025-04-06 18:08:06]     "pilotErrorCode": 0,
[2025-04-06 18:08:06]     "pilotErrorDiag": "",
[2025-04-06 18:08:06]  *** Listing of results directory ***
[2025-04-06 18:08:06] total 677352
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 19:30 pilot3.tar.gz
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 19:44 queuedata.json
[2025-04-06 18:08:06] -rwx------. 1 boincer umatlas     37140 Apr  3 19:46 runpilot2-wrapper.sh
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas       100 Apr  6 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-06 18:08:06] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  6 15:11 run_atlas
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas       105 Apr  6 15:11 job.xml
[2025-04-06 18:08:06] -rw-r--r--. 2 boincer umatlas 362705563 Apr  6 15:11 EVNT.43634896._000699.pool.root.1
[2025-04-06 18:08:06] -rw-r--r--. 2 boincer umatlas     17569 Apr  6 15:11 start_atlas.sh
[2025-04-06 18:08:06] drwxrwx--x. 2 boincer umatlas      4096 Apr  6 15:11 shared
[2025-04-06 18:08:06] -rw-r--r--. 2 boincer umatlas    508893 Apr  6 15:11 input.tar.gz
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas         0 Apr  6 15:11 boinc_lockfile
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas      2600 Apr  6 15:11 pandaJob.out
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas       467 Apr  6 15:11 setup.sh.local
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas    979671 Apr  6 15:11 agis_schedconf.cvmfs.json
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas   1603525 Apr  6 15:11 agis_ddmendpoints.agis.ALL.json
[2025-04-06 18:08:06] drwx------. 4 boincer umatlas      4096 Apr  6 15:11 pilot3
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas      6840 Apr  6 18:03 init_data.xml
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas       531 Apr  6 18:06 boinc_task_state.xml
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas 324352057 Apr  6 18:06 HITS.43634898._018857.pool.root.1
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas      1039 Apr  6 18:07 memory_monitor_summary.json
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas    382789 Apr  6 18:07 log.43634898._018857.job.log.tgz.1
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas        95 Apr  6 18:07 pilot_heartbeat.json
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas      7719 Apr  6 18:07 heartbeat.json
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas      8192 Apr  6 18:07 boinc_mmap_file
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas        28 Apr  6 18:07 wrapper_checkpoint.txt
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas      4353 Apr  6 18:08 pilotlog.txt
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas    974434 Apr  6 18:08 log.43634898._018857.job.log.1
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas       357 Apr  6 18:08 output.list
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas       620 Apr  6 18:08 runtime_log
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas   1372160 Apr  6 18:08 result.tar.gz
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas     11424 Apr  6 18:08 runtime_log.err
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas       657 Apr  6 18:08 gQAODm6RjK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmhFILDmb9HjNn.diag
[2025-04-06 18:08:06] -rw-r--r--. 1 boincer umatlas     20775 Apr  6 18:08 stderr.txt
[2025-04-06 18:08:06] HITS file was successfully produced:
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas 324352057 Apr  6 18:06 shared/HITS.pool.root.1
[2025-04-06 18:08:06]  *** Contents of shared directory: ***
[2025-04-06 18:08:06] total 672828
[2025-04-06 18:08:06] -rw-r--r--. 2 boincer umatlas 362705563 Apr  6 15:11 ATLAS.root_0
[2025-04-06 18:08:06] -rw-r--r--. 2 boincer umatlas     17569 Apr  6 15:11 start_atlas.sh
[2025-04-06 18:08:06] -rw-r--r--. 2 boincer umatlas    508893 Apr  6 15:11 input.tar.gz
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas 324352057 Apr  6 18:06 HITS.pool.root.1
[2025-04-06 18:08:06] -rw-------. 1 boincer umatlas   1372160 Apr  6 18:08 result.tar.gz
18:08:07 (446694): run_atlas exited; CPU time 73665.761572
18:08:07 (446694): called boinc_finish(0)

</stderr_txt>
]]>

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