Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:45:21 (2550940): wrapper (7.7.26015): starting
17:45:21 (2550940): wrapper: running run_atlas (--nthreads 8)
[2025-04-05 17:45:21] Arguments: --nthreads 8
[2025-04-05 17:45:21] Threads: 8
[2025-04-05 17:45:21] Checking for CVMFS
[2025-04-05 17:45:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-05 17:45:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-05 17:45:23] Running cvmfs_config stat atlas.cern.ch
[2025-04-05 17:45:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-05 17:45:25] 2.12.6.0 425763 26225 267380 144541 1 107 19274237 32935937 19569 130560 0 13601438 99.562 13199393 9056 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-05 17:45:25] CVMFS is ok
[2025-04-05 17:45:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-05 17:45:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-05 17:45:25] Further information can be found at the LHC@home message board.
[2025-04-05 17:45:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-05 17:45:25] Checking for apptainer binary...
[2025-04-05 17:45:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-05 17:45:25] Running /usr/bin/apptainer --version
[2025-04-05 17:45:26] apptainer version 1.4.0-1.el9
[2025-04-05 17:45:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-05 17:45:27] c6-12-25-1.aglt2.org
[2025-04-05 17:45:27] apptainer works
[2025-04-05 17:45:27] Set ATHENA_PROC_NUMBER=8
[2025-04-05 17:45:27] Set ATHENA_CORE_NUMBER=8
[2025-04-05 17:45:27] Starting ATLAS job with PandaID=6590579321
[2025-04-05 17:45:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-07 02:52:35]  *** The last 200 lines of the pilot log: ***
[2025-04-07 02:52:35] 2025-04-07 06:51:35,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-07 02:52:35] 2025-04-07 06:51:35,245 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-07 02:52:35] 2025-04-07 06:51:35,245 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-07 02:52:35] 2025-04-07 06:51:35,762 | INFO     | monitor loop #1783: job 0:6590579321 is in state 'finished'
[2025-04-07 02:52:35] 2025-04-07 06:51:35,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 02:52:35] 2025-04-07 06:51:35,826 | INFO     | fitting pss+swap vs Time
[2025-04-07 02:52:35] 2025-04-07 06:51:35,864 | INFO     | sum of square deviations: 2288583510078.2495
[2025-04-07 02:52:35] 2025-04-07 06:51:37,062 | INFO     | sum of deviations: 1731820849953.6572
[2025-04-07 02:52:35] 2025-04-07 06:51:37,085 | INFO     | mean x: 1743949205.1032357
[2025-04-07 02:52:35] 2025-04-07 06:51:37,086 | INFO     | mean y: 2483550.499229584
[2025-04-07 02:52:35] 2025-04-07 06:51:37,086 | INFO     | -- intersect: -1317200691.4599488
[2025-04-07 02:52:35] 2025-04-07 06:51:37,086 | INFO     | intersect: -1317200691.4599488
[2025-04-07 02:52:35] 2025-04-07 06:51:37,119 | INFO     | chi2: 12.524964314674191
[2025-04-07 02:52:35] 2025-04-07 06:51:37,168 | INFO     | sum of square deviations: 2270997289037.8613
[2025-04-07 02:52:35] 2025-04-07 06:51:38,380 | INFO     | monitor loop #1784: job 0:6590579321 is in state 'finished'
[2025-04-07 02:52:35] 2025-04-07 06:51:38,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 02:52:35] 2025-04-07 06:51:38,521 | INFO     | sum of deviations: 2232936561648.7046
[2025-04-07 02:52:35] 2025-04-07 06:51:38,540 | INFO     | mean x: 1743949052.6055613
[2025-04-07 02:52:35] 2025-04-07 06:51:38,541 | INFO     | mean y: 2487893.879505664
[2025-04-07 02:52:35] 2025-04-07 06:51:38,541 | INFO     | -- intersect: -1712233484.2624197
[2025-04-07 02:52:35] 2025-04-07 06:51:38,541 | INFO     | intersect: -1712233484.2624197
[2025-04-07 02:52:35] 2025-04-07 06:51:38,585 | INFO     | chi2: 9.755683366809471
[2025-04-07 02:52:35] 2025-04-07 06:51:38,585 | INFO     | current chi2=9.755683366809471 (change=22.110090522335806 %)
[2025-04-07 02:52:35] 2025-04-07 06:51:38,585 | INFO     | right removable region: 1941
[2025-04-07 02:52:35] 2025-04-07 06:51:38,629 | INFO     | sum of square deviations: 2270996215925.8613
[2025-04-07 02:52:35] 2025-04-07 06:51:39,838 | INFO     | sum of deviations: 1090764178659.138
[2025-04-07 02:52:35] 2025-04-07 06:51:39,839 | INFO     | mean x: 1743949357.6055613
[2025-04-07 02:52:35] 2025-04-07 06:51:39,839 | INFO     | mean y: 2489108.394438723
[2025-04-07 02:52:35] 2025-04-07 06:51:39,858 | INFO     | -- intersect: -835133374.3432698
[2025-04-07 02:52:35] 2025-04-07 06:51:39,858 | INFO     | intersect: -835133374.3432698
[2025-04-07 02:52:35] 2025-04-07 06:51:39,897 | INFO     | chi2: 8.621135948286156
[2025-04-07 02:52:35] 2025-04-07 06:51:39,932 | INFO     | current chi2=8.621135948286156 (change=31.168379153099284 %)
[2025-04-07 02:52:35] 2025-04-07 06:51:39,962 | INFO     | sum of square deviations: 2253499249414.444
[2025-04-07 02:52:35] 2025-04-07 06:51:40,299 | INFO     | 119085s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-07 02:52:35] 2025-04-07 06:51:41,013 | INFO     | monitor loop #1785: job 0:6590579321 is in state 'finished'
[2025-04-07 02:52:35] 2025-04-07 06:51:41,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 02:52:35] 2025-04-07 06:51:41,046 | INFO     | sum of deviations: 613064493681.5082
[2025-04-07 02:52:35] 2025-04-07 06:51:41,046 | INFO     | mean x: 1743949510.1078987
[2025-04-07 02:52:35] 2025-04-07 06:51:41,047 | INFO     | mean y: 2493271.724832215
[2025-04-07 02:52:35] 2025-04-07 06:51:41,047 | INFO     | -- intersect: -471948210.205204
[2025-04-07 02:52:35] 2025-04-07 06:51:41,047 | INFO     | intersect: -471948210.205204
[2025-04-07 02:52:35] 2025-04-07 06:51:41,095 | INFO     | chi2: 6.497473279211986
[2025-04-07 02:52:35] 2025-04-07 06:51:41,095 | INFO     | current chi2=6.497473279211986 (change=24.633211699861253 %)
[2025-04-07 02:52:35] 2025-04-07 06:51:41,116 | INFO     | left removable region: 20
[2025-04-07 02:52:35] 2025-04-07 06:51:41,127 | INFO     | sum of square deviations: 2198114438965.1138
[2025-04-07 02:52:35] 2025-04-07 06:51:41,960 | INFO     | sum of deviations: 378467574892.55945
[2025-04-07 02:52:35] 2025-04-07 06:51:41,961 | INFO     | mean x: 1743949632.1160853
[2025-04-07 02:52:35] 2025-04-07 06:51:41,961 | INFO     | mean y: 2504458.7553357626
[2025-04-07 02:52:35] 2025-04-07 06:51:41,983 | INFO     | -- intersect: -297765798.47134966
[2025-04-07 02:52:35] 2025-04-07 06:51:41,983 | INFO     | intersect: -297765798.47134966
[2025-04-07 02:52:35] 2025-04-07 06:51:42,038 | INFO     | chi2: 0.9297343009117858
[2025-04-07 02:52:35] 2025-04-07 06:51:42,039 | INFO     | -- intersect: -297765798.47134966
[2025-04-07 02:52:35] 2025-04-07 06:51:42,039 | INFO     | current memory leak: 0.17 B/s (using 1921 data points, chi2=0.93)
[2025-04-07 02:52:35] 2025-04-07 06:51:42,051 | INFO     | ..............................
[2025-04-07 02:52:35] 2025-04-07 06:51:42,083 | INFO     | . Timing measurements:
[2025-04-07 02:52:35] 2025-04-07 06:51:42,083 | INFO     | . get job = 1 s
[2025-04-07 02:52:35] 2025-04-07 06:51:42,083 | INFO     | . initial setup = 11 s
[2025-04-07 02:52:35] 2025-04-07 06:51:42,083 | INFO     | . payload setup = 67 s
[2025-04-07 02:52:35] 2025-04-07 06:51:42,084 | INFO     | . stage-in = 0 s
[2025-04-07 02:52:35] 2025-04-07 06:51:42,084 | INFO     | . payload execution = 118797 s
[2025-04-07 02:52:35] 2025-04-07 06:51:42,084 | INFO     | . stage-out = 23 s
[2025-04-07 02:52:35] 2025-04-07 06:51:42,084 | INFO     | . log creation = 5 s
[2025-04-07 02:52:35] 2025-04-07 06:51:42,084 | INFO     | ..............................
[2025-04-07 02:52:35] 2025-04-07 06:51:43,792 | INFO     | 
[2025-04-07 02:52:35] 2025-04-07 06:51:43,793 | INFO     | job summary report
[2025-04-07 02:52:35] 2025-04-07 06:51:43,795 | INFO     | --------------------------------------------------
[2025-04-07 02:52:35] 2025-04-07 06:51:43,795 | INFO     | PanDA job id: 6590579321
[2025-04-07 02:52:35] 2025-04-07 06:51:43,796 | INFO     | task id: 43634898
[2025-04-07 02:52:35] 2025-04-07 06:51:43,796 | INFO     | errors: (none)
[2025-04-07 02:52:35] 2025-04-07 06:51:43,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-07 02:52:35] 2025-04-07 06:51:43,796 | INFO     | pilot state: finished 
[2025-04-07 02:52:35] 2025-04-07 06:51:43,797 | INFO     | transexitcode: 0
[2025-04-07 02:52:35] 2025-04-07 06:51:43,797 | INFO     | exeerrorcode: 0
[2025-04-07 02:52:35] 2025-04-07 06:51:43,797 | INFO     | exeerrordiag: 
[2025-04-07 02:52:35] 2025-04-07 06:51:43,797 | INFO     | exitcode: 0
[2025-04-07 02:52:35] 2025-04-07 06:51:43,798 | INFO     | exitmsg: OK
[2025-04-07 02:52:35] 2025-04-07 06:51:43,798 | INFO     | cpuconsumptiontime: 204953 s
[2025-04-07 02:52:35] 2025-04-07 06:51:43,798 | INFO     | nevents: 400
[2025-04-07 02:52:35] 2025-04-07 06:51:43,798 | INFO     | neventsw: 0
[2025-04-07 02:52:35] 2025-04-07 06:51:43,798 | INFO     | pid: 2611427
[2025-04-07 02:52:35] 2025-04-07 06:51:43,799 | INFO     | pgrp: 2611427
[2025-04-07 02:52:35] 2025-04-07 06:51:43,799 | INFO     | corecount: 8
[2025-04-07 02:52:35] 2025-04-07 06:51:43,799 | INFO     | event service: False
[2025-04-07 02:52:35] 2025-04-07 06:51:43,799 | INFO     | sizes: {0: 2416523, 2: 2417208, 5: 2417264, 7: 2417264, 8: 2417435, 9: 2417463, 21: 2417619, 33: 2417647, 45: 2417703, 51: 2417937, 57: 2417965, 118874: 2461675, 1
[2025-04-07 02:52:35] 2025-04-07 06:51:43,799 | INFO     | --------------------------------------------------
[2025-04-07 02:52:35] 2025-04-07 06:51:43,800 | INFO     | 
[2025-04-07 02:52:35] 2025-04-07 06:51:43,800 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-07 02:52:35] 2025-04-07 06:51:43,956 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,957 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,957 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,957 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,958 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,958 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,958 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,958 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,986 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-07 02:52:35] 2025-04-07 06:51:43,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,987 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-07 02:52:35] 2025-04-07 06:51:43,987 | INFO     | job 6590579321 has completed (purged errors)
[2025-04-07 02:52:35] 2025-04-07 06:51:43,987 | INFO     | overall cleanup function is called
[2025-04-07 02:52:35] 2025-04-07 06:51:45,038 | INFO     | --- collectZombieJob: --- 10, [2611427]
[2025-04-07 02:52:35] 2025-04-07 06:51:45,038 | INFO     | zombie collector waiting for pid 2611427
[2025-04-07 02:52:35] 2025-04-07 06:51:45,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-07 02:52:35] 2025-04-07 06:51:45,039 | INFO     | collected zombie processes
[2025-04-07 02:52:35] 2025-04-07 06:51:45,039 | INFO     | will attempt to kill all subprocesses of pid=2611427
[2025-04-07 02:52:35] 2025-04-07 06:51:59,181 | INFO     | process IDs to be killed: [2611427] (in reverse order)
[2025-04-07 02:52:35] 2025-04-07 06:51:59,725 | WARNING  | found no corresponding commands to process id(s)
[2025-04-07 02:52:35] 2025-04-07 06:51:59,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-07 02:52:35] 2025-04-07 06:52:00,199 | INFO     | did not find any defunct processes belonging to 2611427
[2025-04-07 02:52:35] 2025-04-07 06:52:00,509 | INFO     | did not find any defunct processes belonging to 2611427
[2025-04-07 02:52:35] 2025-04-07 06:52:00,510 | INFO     | ready for new job
[2025-04-07 02:52:35] 2025-04-07 06:52:00,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-07 02:52:35] 2025-04-07 06:52:00,595 | INFO     | **************************************
[2025-04-07 02:52:35] 2025-04-07 06:52:00,596 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-07 02:52:35] 2025-04-07 06:52:00,596 | INFO     | **************************************
[2025-04-07 02:52:35] 2025-04-07 06:52:00,596 | INFO     | 
[2025-04-07 02:52:35] 2025-04-07 06:52:00,700 | INFO     | architecture information:
[2025-04-07 02:52:35] 2025-04-07 06:52:00,836 | INFO     | executing command: cat /etc/os-release
[2025-04-07 02:52:35] 2025-04-07 06:52:01,048 | INFO     | cat /etc/os-release:
[2025-04-07 02:52:35] NAME="CentOS Linux"
[2025-04-07 02:52:35] VERSION="7 (Core)"
[2025-04-07 02:52:35] ID="centos"
[2025-04-07 02:52:35] ID_LIKE="rhel fedora"
[2025-04-07 02:52:35] VERSION_ID="7"
[2025-04-07 02:52:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-07 02:52:35] ANSI_COLOR="0;31"
[2025-04-07 02:52:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-07 02:52:35] HOME_URL="https://www.centos.org/"
[2025-04-07 02:52:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-07 02:52:35] 
[2025-04-07 02:52:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-07 02:52:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-07 02:52:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-07 02:52:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-07 02:52:35] 
[2025-04-07 02:52:35] 2025-04-07 06:52:01,049 | INFO     | **************************************
[2025-04-07 02:52:35] 2025-04-07 06:52:01,562 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-07 02:52:35] 2025-04-07 06:52:01,838 | INFO     | PID=2563040 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-07 02:52:35] 2025-04-07 06:52:01,839 | INFO     | .. there are 23 such processes running
[2025-04-07 02:52:35] 2025-04-07 06:52:01,856 | INFO     | sufficient remaining disk space (72865546240 B)
[2025-04-07 02:52:35] 2025-04-07 06:52:01,856 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-07 02:52:35] 2025-04-07 06:52:01,857 | INFO     | current server update state: UPDATING_FINAL
[2025-04-07 02:52:35] 2025-04-07 06:52:01,857 | INFO     | update_server=False
[2025-04-07 02:52:35] 2025-04-07 06:52:01,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-07 02:52:35] 2025-04-07 06:52:01,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-07 02:52:35] 2025-04-07 06:52:01,870 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-07 02:52:35] 2025-04-07 06:52:01,871 | INFO     | found 0 job(s) in 20 queues
[2025-04-07 02:52:35] 2025-04-07 06:52:01,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-07 02:52:35] 2025-04-07 06:52:01,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-07 02:52:35] 2025-04-07 06:52:01,926 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-07 02:52:35] 2025-04-07 06:52:01,926 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-07 02:52:35] 2025-04-07 06:52:01,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-07 02:52:35] 2025-04-07 06:52:01,950 | INFO     | will abort loop
[2025-04-07 02:52:35] 2025-04-07 06:52:02,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-07 02:52:35] 2025-04-07 06:52:02,575 | INFO     | all payload control threads have been joined
[2025-04-07 02:52:35] 2025-04-07 06:52:02,790 | INFO     | all data control threads have been joined
[2025-04-07 02:52:35] 2025-04-07 06:52:02,790 | INFO     | all job control threads have been joined
[2025-04-07 02:52:35] 2025-04-07 06:52:02,864 | INFO     | [job] retrieve thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:02,887 | INFO     | [job] queue monitor thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:02,957 | INFO     | [job] job monitor thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:03,001 | INFO     | [payload] failed_post thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:03,010 | INFO     | [payload] validate_post thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:03,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-07 02:52:35] 2025-04-07 06:52:03,581 | INFO     | [payload] control thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:03,625 | INFO     | [payload] execute_payloads thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:03,745 | INFO     | [payload] validate_pre thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:03,746 | INFO     | [job] create_data_payload thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:03,747 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:03,797 | INFO     | [data] control thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:03,821 | INFO     | [job] control thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:04,052 | INFO     | [data] copytool_in thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:04,059 | INFO     | [job] validate thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:04,151 | INFO     | [data] copytool_out thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:07,584 | INFO     | [data] queue_monitor thread has finished
[2025-04-07 02:52:35] 2025-04-07 06:52:08,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140204645447488)>', '<ExcThread(monitor, started 140204157425408)>']
[2025-04-07 02:52:35] 2025-04-07 06:52:08,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-07 02:52:35] 2025-04-07 06:52:08,927 | INFO     | [monitor] control thread has ended
[2025-04-07 02:52:35] 2025-04-07 06:52:13,740 | INFO     | all workflow threads have been joined
[2025-04-07 02:52:35] 2025-04-07 06:52:13,740 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-07 02:52:35] 2025-04-07 06:52:13,741 | INFO     | traces error code: 0
[2025-04-07 02:52:35] 2025-04-07 06:52:13,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-07 02:52:35] 2025-04-07 06:52:14,309 [wrapper] ==== pilot stdout END ====
[2025-04-07 02:52:35] 2025-04-07 06:52:14,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-07 02:52:35] 2025-04-07 06:52:14,375 [wrapper] pilotpid: 2563040
[2025-04-07 02:52:35] 2025-04-07 06:52:14,421 [wrapper] Pilot exit status: 0
[2025-04-07 02:52:35] 2025-04-07 06:52:14,609 [wrapper] pandaids: 6590579321
[2025-04-07 02:52:35] 2025-04-07 06:52:15,802 [wrapper] cleanup supervisor_pilot  511134 2563041
[2025-04-07 02:52:35] 2025-04-07 06:52:15,881 [wrapper] Test setup, not cleaning
[2025-04-07 02:52:35] 2025-04-07 06:52:15,948 [wrapper] apfmon messages muted
[2025-04-07 02:52:35] 2025-04-07 06:52:16,033 [wrapper] ==== wrapper stdout END ====
[2025-04-07 02:52:35] 2025-04-07 06:52:16,130 [wrapper] ==== wrapper stderr END ====
[2025-04-07 02:52:35]  *** Error codes and diagnostics ***
[2025-04-07 02:52:35]     "exeErrorCode": 0,
[2025-04-07 02:52:35]     "exeErrorDiag": "",
[2025-04-07 02:52:35]     "pilotErrorCode": 0,
[2025-04-07 02:52:35]     "pilotErrorDiag": "",
[2025-04-07 02:52:35]  *** Listing of results directory ***
[2025-04-07 02:52:35] total 679224
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas    495897 Apr  5 17:38 pilot3.tar.gz
[2025-04-07 02:52:35] -rwx------. 1 boincer umatlas     37140 Apr  5 17:41 runpilot2-wrapper.sh
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas      5111 Apr  5 17:41 queuedata.json
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas       100 Apr  5 17:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-07 02:52:35] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  5 17:45 run_atlas
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas       105 Apr  5 17:45 job.xml
[2025-04-07 02:52:35] -rw-r--r--. 2 boincer umatlas 359048996 Apr  5 17:45 EVNT.43634896._000626.pool.root.1
[2025-04-07 02:52:35] drwxrwx--x. 2 boincer umatlas      4096 Apr  5 17:45 shared
[2025-04-07 02:52:35] -rw-r--r--. 2 boincer umatlas    508891 Apr  5 17:45 input.tar.gz
[2025-04-07 02:52:35] -rw-r--r--. 2 boincer umatlas     17569 Apr  5 17:45 start_atlas.sh
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas         0 Apr  5 17:45 boinc_lockfile
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas      2601 Apr  5 17:45 pandaJob.out
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas       467 Apr  5 17:45 setup.sh.local
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas    980067 Apr  5 17:46 agis_schedconf.cvmfs.json
[2025-04-07 02:52:35] drwx------. 4 boincer umatlas      4096 Apr  5 17:47 pilot3
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas 323332186 Apr  7 02:44 HITS.43634898._021479.pool.root.1
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas       534 Apr  7 02:45 boinc_task_state.xml
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas      6858 Apr  7 02:48 init_data.xml
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas      1069 Apr  7 02:49 memory_monitor_summary.json
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas   1603525 Apr  7 02:50 agis_ddmendpoints.agis.ALL.json
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas    833617 Apr  7 02:50 log.43634898._021479.job.log.tgz.1
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas        95 Apr  7 02:51 pilot_heartbeat.json
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas      7762 Apr  7 02:51 heartbeat.json
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas      5058 Apr  7 02:52 pilotlog.txt
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas      8192 Apr  7 02:52 boinc_mmap_file
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas        30 Apr  7 02:52 wrapper_checkpoint.txt
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas   3818786 Apr  7 02:52 log.43634898._021479.job.log.1
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas       357 Apr  7 02:52 output.list
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas       620 Apr  7 02:52 runtime_log
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas   4669440 Apr  7 02:52 result.tar.gz
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas       669 Apr  7 02:52 xhvMDmCSQL7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm7rILDmH1ux0n.diag
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas     11430 Apr  7 02:52 runtime_log.err
[2025-04-07 02:52:35] -rw-r--r--. 1 boincer umatlas     21340 Apr  7 02:52 stderr.txt
[2025-04-07 02:52:35] HITS file was successfully produced:
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas 323332186 Apr  7 02:44 shared/HITS.pool.root.1
[2025-04-07 02:52:35]  *** Contents of shared directory: ***
[2025-04-07 02:52:35] total 671480
[2025-04-07 02:52:35] -rw-r--r--. 2 boincer umatlas 359048996 Apr  5 17:45 ATLAS.root_0
[2025-04-07 02:52:35] -rw-r--r--. 2 boincer umatlas    508891 Apr  5 17:45 input.tar.gz
[2025-04-07 02:52:35] -rw-r--r--. 2 boincer umatlas     17569 Apr  5 17:45 start_atlas.sh
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas 323332186 Apr  7 02:44 HITS.pool.root.1
[2025-04-07 02:52:35] -rw-------. 1 boincer umatlas   4669440 Apr  7 02:52 result.tar.gz
02:52:37 (2550940): run_atlas exited; CPU time 211164.990896
02:52:37 (2550940): called boinc_finish(0)

</stderr_txt>
]]>

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