Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:17:25 (3556233): wrapper (7.7.26015): starting
11:17:25 (3556233): wrapper: running run_atlas (--nthreads 9)
[2025-04-05 11:17:25] Arguments: --nthreads 9
[2025-04-05 11:17:25] Threads: 9
[2025-04-05 11:17:25] Checking for CVMFS
[2025-04-05 11:17:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-05 11:17:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-05 11:17:25] Running cvmfs_config stat atlas.cern.ch
[2025-04-05 11:17:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-05 11:17:26] 2.12.6.0 1724982 192843 448928 144530 0 166 30961289 32935937 12422 130560 0 24546136 99.836 10037824 19793 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-05 11:17:26] CVMFS is ok
[2025-04-05 11:17:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-05 11:17:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-05 11:17:26] Further information can be found at the LHC@home message board.
[2025-04-05 11:17:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-05 11:17:26] Checking for apptainer binary...
[2025-04-05 11:17:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-05 11:17:26] Running /usr/bin/apptainer --version
[2025-04-05 11:17:26] apptainer version 1.4.0-1.el9
[2025-04-05 11:17:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-05 11:17:26] c6-2-29-1.aglt2.org
[2025-04-05 11:17:26] apptainer works
[2025-04-05 11:17:26] Set ATHENA_PROC_NUMBER=9
[2025-04-05 11:17:26] Set ATHENA_CORE_NUMBER=9
[2025-04-05 11:17:26] Starting ATLAS job with PandaID=6587176075
[2025-04-05 11:17:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-05 23:58:37]  *** The last 200 lines of the pilot log: ***
[2025-04-05 23:58:37] 2025-04-06 03:58:14,642 | INFO     | -- intersect: -4217081855.6067433
[2025-04-05 23:58:37] 2025-04-06 03:58:14,643 | INFO     | intersect: -4217081855.6067433
[2025-04-05 23:58:37] 2025-04-06 03:58:14,643 | INFO     | chi2: 5.705243283732894
[2025-04-05 23:58:37] 2025-04-06 03:58:14,644 | INFO     | current chi2=5.705243283732894 (change=33.339488426413446 %)
[2025-04-05 23:58:37] 2025-04-06 03:58:14,645 | INFO     | sum of square deviations: 124129804916.96562
[2025-04-05 23:58:37] 2025-04-06 03:58:14,760 | INFO     | sum of deviations: 322910781638.55884
[2025-04-05 23:58:37] 2025-04-06 03:58:14,817 | INFO     | mean x: 1743888731.9023066
[2025-04-05 23:58:37] 2025-04-06 03:58:14,817 | INFO     | mean y: 2470427.7299864315
[2025-04-05 23:58:37] 2025-04-06 03:58:14,818 | INFO     | -- intersect: -4534074795.119097
[2025-04-05 23:58:37] 2025-04-06 03:58:14,818 | INFO     | intersect: -4534074795.119097
[2025-04-05 23:58:37] 2025-04-06 03:58:14,818 | INFO     | chi2: 5.677692884035396
[2025-04-05 23:58:37] 2025-04-06 03:58:14,819 | INFO     | current chi2=5.677692884035396 (change=0.48289614180084445 %)
[2025-04-05 23:58:37] 2025-04-06 03:58:14,819 | INFO     | right removable region: 736
[2025-04-05 23:58:37] 2025-04-06 03:58:14,819 | INFO     | sum of square deviations: 126672922338.12042
[2025-04-05 23:58:37] 2025-04-06 03:58:14,967 | INFO     | sum of deviations: -81698980519.66182
[2025-04-05 23:58:37] 2025-04-06 03:58:14,967 | INFO     | mean x: 1743889189.4002695
[2025-04-05 23:58:37] 2025-04-06 03:58:14,967 | INFO     | mean y: 2468628.3086253367
[2025-04-05 23:58:37] 2025-04-06 03:58:14,968 | INFO     | -- intersect: 1127207572.3819628
[2025-04-05 23:58:37] 2025-04-06 03:58:14,968 | INFO     | intersect: 1127207572.3819628
[2025-04-05 23:58:37] 2025-04-06 03:58:14,969 | INFO     | chi2: 6.0694373099881895
[2025-04-05 23:58:37] 2025-04-06 03:58:14,969 | INFO     | current chi2=6.0694373099881895 (change=29.084216758780425 %)
[2025-04-05 23:58:37] 2025-04-06 03:58:15,004 | INFO     | sum of square deviations: 124129126716.53989
[2025-04-05 23:58:37] 2025-04-06 03:58:15,099 | INFO     | sum of deviations: -246027060568.6364
[2025-04-05 23:58:37] 2025-04-06 03:58:15,139 | INFO     | mean x: 1743889341.9063773
[2025-04-05 23:58:37] 2025-04-06 03:58:15,140 | INFO     | mean y: 2478479.4545454546
[2025-04-05 23:58:37] 2025-04-06 03:58:15,140 | INFO     | -- intersect: 3458911148.363597
[2025-04-05 23:58:37] 2025-04-06 03:58:15,140 | INFO     | intersect: 3458911148.363597
[2025-04-05 23:58:37] 2025-04-06 03:58:15,141 | INFO     | chi2: 4.281195848088504
[2025-04-05 23:58:37] 2025-04-06 03:58:15,141 | INFO     | current chi2=4.281195848088504 (change=29.463051854195122 %)
[2025-04-05 23:58:37] 2025-04-06 03:58:15,142 | INFO     | sum of square deviations: 121619610807.40445
[2025-04-05 23:58:37] 2025-04-06 03:58:15,300 | INFO     | sum of deviations: -370807580378.50555
[2025-04-05 23:58:37] 2025-04-06 03:58:15,323 | INFO     | mean x: 1743889494.4125683
[2025-04-05 23:58:37] 2025-04-06 03:58:15,324 | INFO     | mean y: 2486053.3592896173
[2025-04-05 23:58:37] 2025-04-06 03:58:15,324 | INFO     | -- intersect: 5319452943.630333
[2025-04-05 23:58:37] 2025-04-06 03:58:15,324 | INFO     | intersect: 5319452943.630333
[2025-04-05 23:58:37] 2025-04-06 03:58:15,325 | INFO     | chi2: 3.1233459728692963
[2025-04-05 23:58:37] 2025-04-06 03:58:15,326 | INFO     | current chi2=3.1233459728692963 (change=27.04501070036709 %)
[2025-04-05 23:58:37] 2025-04-06 03:58:15,327 | INFO     | sum of square deviations: 119144231353.8817
[2025-04-05 23:58:37] 2025-04-06 03:58:15,401 | INFO     | sum of deviations: -391832816949.8365
[2025-04-05 23:58:37] 2025-04-06 03:58:15,402 | INFO     | mean x: 1743889646.9160936
[2025-04-05 23:58:37] 2025-04-06 03:58:15,402 | INFO     | mean y: 2487345.592847318
[2025-04-05 23:58:37] 2025-04-06 03:58:15,402 | INFO     | -- intersect: 5737663820.660403
[2025-04-05 23:58:37] 2025-04-06 03:58:15,402 | INFO     | intersect: 5737663820.660403
[2025-04-05 23:58:37] 2025-04-06 03:58:15,403 | INFO     | chi2: 3.063502980303556
[2025-04-05 23:58:37] 2025-04-06 03:58:15,403 | INFO     | current chi2=3.063502980303556 (change=1.915989873858419 %)
[2025-04-05 23:58:37] 2025-04-06 03:58:15,403 | INFO     | left removable region: 40
[2025-04-05 23:58:37] 2025-04-06 03:58:15,404 | INFO     | sum of square deviations: 104543493628.40802
[2025-04-05 23:58:37] 2025-04-06 03:58:15,421 | INFO     | sum of deviations: -169723396189.93115
[2025-04-05 23:58:37] 2025-04-06 03:58:15,421 | INFO     | mean x: 1743889921.428161
[2025-04-05 23:58:37] 2025-04-06 03:58:15,425 | INFO     | mean y: 2501429.2413793104
[2025-04-05 23:58:37] 2025-04-06 03:58:15,425 | INFO     | -- intersect: 2833657245.5776353
[2025-04-05 23:58:37] 2025-04-06 03:58:15,425 | INFO     | intersect: 2833657245.5776353
[2025-04-05 23:58:37] 2025-04-06 03:58:15,426 | INFO     | chi2: 0.12129586082531177
[2025-04-05 23:58:37] 2025-04-06 03:58:15,427 | INFO     | -- intersect: 2833657245.5776353
[2025-04-05 23:58:37] 2025-04-06 03:58:15,427 | INFO     | current memory leak: -1.62 B/s (using 696 data points, chi2=0.12)
[2025-04-05 23:58:37] 2025-04-06 03:58:15,428 | INFO     | ..............................
[2025-04-05 23:58:37] 2025-04-06 03:58:15,428 | INFO     | . Timing measurements:
[2025-04-05 23:58:37] 2025-04-06 03:58:15,428 | INFO     | . get job = 0 s
[2025-04-05 23:58:37] 2025-04-06 03:58:15,428 | INFO     | . initial setup = 2 s
[2025-04-05 23:58:37] 2025-04-06 03:58:15,428 | INFO     | . payload setup = 5 s
[2025-04-05 23:58:37] 2025-04-06 03:58:15,428 | INFO     | . stage-in = 0 s
[2025-04-05 23:58:37] 2025-04-06 03:58:15,428 | INFO     | . payload execution = 45552 s
[2025-04-05 23:58:37] 2025-04-06 03:58:15,428 | INFO     | . stage-out = 7 s
[2025-04-05 23:58:37] 2025-04-06 03:58:15,428 | INFO     | . log creation = 2 s
[2025-04-05 23:58:37] 2025-04-06 03:58:15,428 | INFO     | ..............................
[2025-04-05 23:58:37] 2025-04-06 03:58:16,045 | INFO     | 
[2025-04-05 23:58:37] 2025-04-06 03:58:16,045 | INFO     | job summary report
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | --------------------------------------------------
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | PanDA job id: 6587176075
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | task id: 43634898
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | errors: (none)
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | pilot state: finished 
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | transexitcode: 0
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | exeerrorcode: 0
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | exeerrordiag: 
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | exitcode: 0
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | exitmsg: OK
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | cpuconsumptiontime: 81176 s
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | nevents: 400
[2025-04-05 23:58:37] 2025-04-06 03:58:16,046 | INFO     | neventsw: 0
[2025-04-05 23:58:37] 2025-04-06 03:58:16,047 | INFO     | pid: 3566936
[2025-04-05 23:58:37] 2025-04-06 03:58:16,047 | INFO     | pgrp: 3566936
[2025-04-05 23:58:37] 2025-04-06 03:58:16,047 | INFO     | corecount: 9
[2025-04-05 23:58:37] 2025-04-06 03:58:16,047 | INFO     | event service: False
[2025-04-05 23:58:37] 2025-04-06 03:58:16,047 | INFO     | sizes: {0: 2417178, 1: 2417377, 5: 2417583, 12: 2417639, 45559: 2461486, 45560: 2461485, 45569: 2470610, 45571: 2470666, 45623: 2470836}
[2025-04-05 23:58:37] 2025-04-06 03:58:16,047 | INFO     | --------------------------------------------------
[2025-04-05 23:58:37] 2025-04-06 03:58:16,047 | INFO     | 
[2025-04-05 23:58:37] 2025-04-06 03:58:16,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-05 23:58:37] 2025-04-06 03:58:16,481 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-05 23:58:37] 2025-04-06 03:58:16,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-05 23:58:37] 2025-04-06 03:58:16,483 | INFO     | job 6587176075 has completed (purged errors)
[2025-04-05 23:58:37] 2025-04-06 03:58:16,483 | INFO     | overall cleanup function is called
[2025-04-05 23:58:37] 2025-04-06 03:58:17,497 | INFO     | --- collectZombieJob: --- 10, [3566936]
[2025-04-05 23:58:37] 2025-04-06 03:58:17,497 | INFO     | zombie collector waiting for pid 3566936
[2025-04-05 23:58:37] 2025-04-06 03:58:17,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-05 23:58:37] 2025-04-06 03:58:17,498 | INFO     | collected zombie processes
[2025-04-05 23:58:37] 2025-04-06 03:58:17,498 | INFO     | will attempt to kill all subprocesses of pid=3566936
[2025-04-05 23:58:37] 2025-04-06 03:58:18,472 | INFO     | process IDs to be killed: [3566936] (in reverse order)
[2025-04-05 23:58:37] 2025-04-06 03:58:20,783 | WARNING  | found no corresponding commands to process id(s)
[2025-04-05 23:58:37] 2025-04-06 03:58:20,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-05 23:58:37] 2025-04-06 03:58:20,896 | INFO     | did not find any defunct processes belonging to 3566936
[2025-04-05 23:58:37] 2025-04-06 03:58:21,077 | INFO     | did not find any defunct processes belonging to 3566936
[2025-04-05 23:58:37] 2025-04-06 03:58:21,089 | INFO     | ready for new job
[2025-04-05 23:58:37] 2025-04-06 03:58:21,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-05 23:58:37] 2025-04-06 03:58:21,092 | INFO     | **************************************
[2025-04-05 23:58:37] 2025-04-06 03:58:21,092 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-05 23:58:37] 2025-04-06 03:58:21,092 | INFO     | **************************************
[2025-04-05 23:58:37] 2025-04-06 03:58:21,092 | INFO     | 
[2025-04-05 23:58:37] 2025-04-06 03:58:21,111 | INFO     | architecture information:
[2025-04-05 23:58:37] 2025-04-06 03:58:21,135 | INFO     | executing command: cat /etc/os-release
[2025-04-05 23:58:37] 2025-04-06 03:58:21,257 | INFO     | PID=3559809 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-05 23:58:37] 2025-04-06 03:58:21,258 | INFO     | .. there are 17 such processes running
[2025-04-05 23:58:37] 2025-04-06 03:58:21,278 | INFO     | cat /etc/os-release:
[2025-04-05 23:58:37] NAME="CentOS Linux"
[2025-04-05 23:58:37] VERSION="7 (Core)"
[2025-04-05 23:58:37] ID="centos"
[2025-04-05 23:58:37] ID_LIKE="rhel fedora"
[2025-04-05 23:58:37] VERSION_ID="7"
[2025-04-05 23:58:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-05 23:58:37] ANSI_COLOR="0;31"
[2025-04-05 23:58:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-05 23:58:37] HOME_URL="https://www.centos.org/"
[2025-04-05 23:58:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-05 23:58:37] 
[2025-04-05 23:58:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-05 23:58:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-05 23:58:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-05 23:58:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-05 23:58:37] 
[2025-04-05 23:58:37] 2025-04-06 03:58:21,279 | INFO     | **************************************
[2025-04-05 23:58:37] 2025-04-06 03:58:21,782 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-05 23:58:37] 2025-04-06 03:58:21,931 | INFO     | sufficient remaining disk space (74038902784 B)
[2025-04-05 23:58:37] 2025-04-06 03:58:21,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-05 23:58:37] 2025-04-06 03:58:21,932 | INFO     | current server update state: UPDATING_FINAL
[2025-04-05 23:58:37] 2025-04-06 03:58:21,932 | INFO     | update_server=False
[2025-04-05 23:58:37] 2025-04-06 03:58:21,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-05 23:58:37] 2025-04-06 03:58:21,932 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-05 23:58:37] 2025-04-06 03:58:21,932 | INFO     | found 0 job(s) in 20 queues
[2025-04-05 23:58:37] 2025-04-06 03:58:21,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-05 23:58:37] 2025-04-06 03:58:21,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-05 23:58:37] 2025-04-06 03:58:22,207 | INFO     | all job control threads have been joined
[2025-04-05 23:58:37] 2025-04-06 03:58:22,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-05 23:58:37] 2025-04-06 03:58:22,265 | INFO     | aborting loop
[2025-04-05 23:58:37] 2025-04-06 03:58:22,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-05 23:58:37] 2025-04-06 03:58:22,642 | INFO     | all payload control threads have been joined
[2025-04-05 23:58:37] 2025-04-06 03:58:22,668 | INFO     | all data control threads have been joined
[2025-04-05 23:58:37] 2025-04-06 03:58:22,937 | INFO     | [job] retrieve thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:22,964 | INFO     | [payload] failed_post thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:23,078 | INFO     | [payload] execute_payloads thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:23,088 | INFO     | [payload] validate_pre thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:23,228 | INFO     | [job] control thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:23,302 | INFO     | [job] job monitor thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:23,566 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:23,648 | INFO     | [payload] control thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:23,682 | INFO     | [data] control thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:23,789 | INFO     | [job] validate thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:23,943 | INFO     | [payload] validate_post thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:24,130 | INFO     | [job] create_data_payload thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:24,224 | INFO     | [data] copytool_in thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:24,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-05 23:58:37] 2025-04-06 03:58:24,596 | INFO     | [data] copytool_out thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:24,724 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-05 23:58:37] 2025-04-06 03:58:25,730 | INFO     | [job] queue monitor thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:28,241 | INFO     | [data] queue_monitor thread has finished
[2025-04-05 23:58:37] 2025-04-06 03:58:28,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086112593728)>', '<ExcThread(monitor, started 140085743818496)>']
[2025-04-05 23:58:37] 2025-04-06 03:58:28,987 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-05 23:58:37] 2025-04-06 03:58:28,987 | INFO     | [monitor] control thread has ended
[2025-04-05 23:58:37] 2025-04-06 03:58:33,995 | INFO     | all workflow threads have been joined
[2025-04-05 23:58:37] 2025-04-06 03:58:33,995 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-05 23:58:37] 2025-04-06 03:58:33,996 | INFO     | traces error code: 0
[2025-04-05 23:58:37] 2025-04-06 03:58:33,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-05 23:58:37] 2025-04-06 03:58:35,444 [wrapper] ==== pilot stdout END ====
[2025-04-05 23:58:37] 2025-04-06 03:58:35,506 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-05 23:58:37] 2025-04-06 03:58:35,555 [wrapper] pilotpid: 3559809
[2025-04-05 23:58:37] 2025-04-06 03:58:35,617 [wrapper] Pilot exit status: 0
[2025-04-05 23:58:37] 2025-04-06 03:58:35,778 [wrapper] pandaids: 6587176075
[2025-04-05 23:58:37] 2025-04-06 03:58:35,903 [wrapper] cleanup supervisor_pilot 1976621 3559810
[2025-04-05 23:58:37] 2025-04-06 03:58:35,915 [wrapper] Test setup, not cleaning
[2025-04-05 23:58:37] 2025-04-06 03:58:35,919 [wrapper] apfmon messages muted
[2025-04-05 23:58:37] 2025-04-06 03:58:35,935 [wrapper] ==== wrapper stdout END ====
[2025-04-05 23:58:37] 2025-04-06 03:58:35,967 [wrapper] ==== wrapper stderr END ====
[2025-04-05 23:58:37]  *** Error codes and diagnostics ***
[2025-04-05 23:58:37]     "exeErrorCode": 0,
[2025-04-05 23:58:37]     "exeErrorDiag": "",
[2025-04-05 23:58:37]     "pilotErrorCode": 0,
[2025-04-05 23:58:37]     "pilotErrorDiag": "",
[2025-04-05 23:58:37]  *** Listing of results directory ***
[2025-04-05 23:58:37] total 672124
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 23:48 queuedata.json
[2025-04-05 23:58:37] -rwx------. 1 boincer umatlas     37140 Apr  3 23:48 runpilot2-wrapper.sh
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 23:48 pilot3.tar.gz
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas       100 Apr  5 11:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-05 23:58:37] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  5 11:17 run_atlas
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas       105 Apr  5 11:17 job.xml
[2025-04-05 23:58:37] -rw-r--r--. 2 boincer umatlas 358515769 Apr  5 11:17 EVNT.43634896._000773.pool.root.1
[2025-04-05 23:58:37] -rw-r--r--. 2 boincer umatlas     17569 Apr  5 11:17 start_atlas.sh
[2025-04-05 23:58:37] drwxrwx--x. 2 boincer umatlas      4096 Apr  5 11:17 shared
[2025-04-05 23:58:37] -rw-r--r--. 2 boincer umatlas    508883 Apr  5 11:17 input.tar.gz
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas         0 Apr  5 11:17 boinc_lockfile
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas      2599 Apr  5 11:17 pandaJob.out
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas       467 Apr  5 11:17 setup.sh.local
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas    979979 Apr  5 11:17 agis_schedconf.cvmfs.json
[2025-04-05 23:58:37] drwx------. 4 boincer umatlas      4096 Apr  5 11:17 pilot3
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas 317459678 Apr  5 23:52 HITS.43634898._020304.pool.root.1
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas       532 Apr  5 23:53 boinc_task_state.xml
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas      1053 Apr  5 23:57 memory_monitor_summary.json
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas   1603525 Apr  5 23:57 agis_ddmendpoints.agis.ALL.json
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas    682556 Apr  5 23:57 log.43634898._020304.job.log.tgz.1
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas        95 Apr  5 23:58 pilot_heartbeat.json
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas      7742 Apr  5 23:58 heartbeat.json
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas      6840 Apr  5 23:58 init_data.xml
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas      8192 Apr  5 23:58 boinc_mmap_file
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas        28 Apr  5 23:58 wrapper_checkpoint.txt
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas      4871 Apr  5 23:58 pilotlog.txt
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas   3536750 Apr  5 23:58 log.43634898._020304.job.log.1
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas       357 Apr  5 23:58 output.list
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas       620 Apr  5 23:58 runtime_log
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas   4239360 Apr  5 23:58 result.tar.gz
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas     11424 Apr  5 23:58 runtime_log.err
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas       665 Apr  5 23:58 ehXKDmkDnK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmSVtKDmyeG13m.diag
[2025-04-05 23:58:37] -rw-r--r--. 1 boincer umatlas     21042 Apr  5 23:58 stderr.txt
[2025-04-05 23:58:37] HITS file was successfully produced:
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas 317459678 Apr  5 23:52 shared/HITS.pool.root.1
[2025-04-05 23:58:37]  *** Contents of shared directory: ***
[2025-04-05 23:58:37] total 664804
[2025-04-05 23:58:37] -rw-r--r--. 2 boincer umatlas 358515769 Apr  5 11:17 ATLAS.root_0
[2025-04-05 23:58:37] -rw-r--r--. 2 boincer umatlas     17569 Apr  5 11:17 start_atlas.sh
[2025-04-05 23:58:37] -rw-r--r--. 2 boincer umatlas    508883 Apr  5 11:17 input.tar.gz
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas 317459678 Apr  5 23:52 HITS.pool.root.1
[2025-04-05 23:58:37] -rw-------. 1 boincer umatlas   4239360 Apr  5 23:58 result.tar.gz
23:58:38 (3556233): run_atlas exited; CPU time 82598.368488
23:58:38 (3556233): called boinc_finish(0)

</stderr_txt>
]]>

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