Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:30:22 (15937): wrapper (7.7.26015): starting
08:30:22 (15937): wrapper: running run_atlas (--nthreads 10)
[2025-04-05 08:30:22] Arguments: --nthreads 10
[2025-04-05 08:30:22] Threads: 10
[2025-04-05 08:30:22] Checking for CVMFS
[2025-04-05 08:30:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-05 08:30:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-05 08:30:24] Running cvmfs_config stat atlas.cern.ch
[2025-04-05 08:30:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-05 08:30:27] 2.11.2.0 30332 22141 139932 144527 0 100 13383889 18432001 7615 130560 0 72395045 98.585 235085046 37627 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-05 08:30:27] CVMFS is ok
[2025-04-05 08:30:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-05 08:30:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-05 08:30:27] Further information can be found at the LHC@home message board.
[2025-04-05 08:30:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-05 08:30:27] Checking for apptainer binary...
[2025-04-05 08:30:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-05 08:30:27] Running /usr/bin/apptainer --version
[2025-04-05 08:30:28] apptainer version 1.3.2-1.el7
[2025-04-05 08:30:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-05 08:30:50] c-210-14.aglt2.org
[2025-04-05 08:30:50] apptainer works
[2025-04-05 08:30:50] Set ATHENA_PROC_NUMBER=10
[2025-04-05 08:30:50] Set ATHENA_CORE_NUMBER=10
[2025-04-05 08:30:51] Starting ATLAS job with PandaID=6587182171
[2025-04-05 08:30:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-06 05:40:12]  *** The last 200 lines of the pilot log: ***
[2025-04-06 05:40:12] 2025-04-06 09:39:45,207 | INFO     | chi2: 8.427663280905744
[2025-04-06 05:40:12] 2025-04-06 09:39:45,207 | INFO     | current chi2=8.427663280905744 (change=8.39814715702126 %)
[2025-04-06 05:40:12] 2025-04-06 09:39:45,207 | INFO     | right removable region: 1235
[2025-04-06 05:40:12] 2025-04-06 09:39:45,213 | INFO     | sum of square deviations: 585513871353.8148
[2025-04-06 05:40:12] 2025-04-06 09:39:45,738 | INFO     | sum of deviations: 1412852914155.2441
[2025-04-06 05:40:12] 2025-04-06 09:39:45,738 | INFO     | mean x: 1743894617.8891585
[2025-04-06 05:40:12] 2025-04-06 09:39:45,738 | INFO     | mean y: 2631484.2718446604
[2025-04-06 05:40:12] 2025-04-06 09:39:45,738 | INFO     | -- intersect: -4205409884.871869
[2025-04-06 05:40:12] 2025-04-06 09:39:45,738 | INFO     | intersect: -4205409884.871869
[2025-04-06 05:40:12] 2025-04-06 09:39:45,750 | INFO     | chi2: 5.404804739968456
[2025-04-06 05:40:12] 2025-04-06 09:39:45,750 | INFO     | current chi2=5.404804739968456 (change=41.254163587986184 %)
[2025-04-06 05:40:12] 2025-04-06 09:39:45,752 | INFO     | sum of square deviations: 578436434551.9148
[2025-04-06 05:40:12] 2025-04-06 09:39:46,080 | INFO     | sum of deviations: 1105701605659.2668
[2025-04-06 05:40:12] 2025-04-06 09:39:46,080 | INFO     | mean x: 1743894770.3939886
[2025-04-06 05:40:12] 2025-04-06 09:39:46,081 | INFO     | mean y: 2638102.0633631195
[2025-04-06 05:40:12] 2025-04-06 09:39:46,081 | INFO     | -- intersect: -3330878136.793774
[2025-04-06 05:40:12] 2025-04-06 09:39:46,081 | INFO     | intersect: -3330878136.793774
[2025-04-06 05:40:12] 2025-04-06 09:39:46,092 | INFO     | chi2: 3.4988189102113494
[2025-04-06 05:40:12] 2025-04-06 09:39:46,092 | INFO     | current chi2=3.4988189102113494 (change=35.26465656867061 %)
[2025-04-06 05:40:12] 2025-04-06 09:39:46,096 | INFO     | sum of square deviations: 571416179544.6592
[2025-04-06 05:40:12] 2025-04-06 09:39:46,699 | INFO     | sum of deviations: 821373117589.1642
[2025-04-06 05:40:12] 2025-04-06 09:39:46,699 | INFO     | mean x: 1743894922.8996737
[2025-04-06 05:40:12] 2025-04-06 09:39:46,699 | INFO     | mean y: 2644278.6598694944
[2025-04-06 05:40:12] 2025-04-06 09:39:46,699 | INFO     | -- intersect: -2504089798.613613
[2025-04-06 05:40:12] 2025-04-06 09:39:46,699 | INFO     | intersect: -2504089798.613613
[2025-04-06 05:40:12] 2025-04-06 09:39:46,724 | INFO     | chi2: 1.884093348062569
[2025-04-06 05:40:12] 2025-04-06 09:39:46,748 | INFO     | current chi2=1.884093348062569 (change=46.15058977291401 %)
[2025-04-06 05:40:12] 2025-04-06 09:39:46,773 | INFO     | sum of square deviations: 564452948862.324
[2025-04-06 05:40:12] 2025-04-06 09:39:47,153 | INFO     | monitor loop #3824: job 0:6587182171 is in state 'finished'
[2025-04-06 05:40:12] 2025-04-06 09:39:47,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 05:40:12] 2025-04-06 09:39:47,395 | INFO     | sum of deviations: 643100899723.4058
[2025-04-06 05:40:12] 2025-04-06 09:39:47,433 | INFO     | mean x: 1743895075.4054055
[2025-04-06 05:40:12] 2025-04-06 09:39:47,433 | INFO     | mean y: 2648180.574938575
[2025-04-06 05:40:12] 2025-04-06 09:39:47,433 | INFO     | -- intersect: -1984232203.8341763
[2025-04-06 05:40:12] 2025-04-06 09:39:47,433 | INFO     | intersect: -1984232203.8341763
[2025-04-06 05:40:12] 2025-04-06 09:39:47,512 | INFO     | chi2: 1.2071734281077446
[2025-04-06 05:40:12] 2025-04-06 09:39:47,512 | INFO     | current chi2=1.2071734281077446 (change=35.928151896025085 %)
[2025-04-06 05:40:12] 2025-04-06 09:39:47,567 | INFO     | sum of square deviations: 557546584181.2305
[2025-04-06 05:40:12] 2025-04-06 09:39:47,928 | INFO     | sum of deviations: 564344879675.8666
[2025-04-06 05:40:12] 2025-04-06 09:39:47,929 | INFO     | mean x: 1743895227.9103618
[2025-04-06 05:40:12] 2025-04-06 09:39:47,929 | INFO     | mean y: 2649919.1455592103
[2025-04-06 05:40:12] 2025-04-06 09:39:47,929 | INFO     | -- intersect: -1762509029.8732917
[2025-04-06 05:40:12] 2025-04-06 09:39:47,929 | INFO     | intersect: -1762509029.8732917
[2025-04-06 05:40:12] 2025-04-06 09:39:47,931 | INFO     | chi2: 1.095532974635245
[2025-04-06 05:40:12] 2025-04-06 09:39:47,931 | INFO     | current chi2=1.095532974635245 (change=9.248087381073088 %)
[2025-04-06 05:40:12] 2025-04-06 09:39:47,931 | INFO     | left removable region: 50
[2025-04-06 05:40:12] 2025-04-06 09:39:47,933 | INFO     | sum of square deviations: 515983455935.1852
[2025-04-06 05:40:12] 2025-04-06 09:39:47,968 | INFO     | sum of deviations: 393097142762.1215
[2025-04-06 05:40:12] 2025-04-06 09:39:47,968 | INFO     | mean x: 1743895807.4227848
[2025-04-06 05:40:12] 2025-04-06 09:39:47,968 | INFO     | mean y: 2657500.684388186
[2025-04-06 05:40:12] 2025-04-06 09:39:47,968 | INFO     | -- intersect: -1325913117.7868574
[2025-04-06 05:40:12] 2025-04-06 09:39:47,968 | INFO     | intersect: -1325913117.7868574
[2025-04-06 05:40:12] 2025-04-06 09:39:47,970 | INFO     | chi2: 0.0232962329369568
[2025-04-06 05:40:12] 2025-04-06 09:39:47,970 | INFO     | -- intersect: -1325913117.7868574
[2025-04-06 05:40:12] 2025-04-06 09:39:47,970 | INFO     | current memory leak: 0.76 B/s (using 1185 data points, chi2=0.02)
[2025-04-06 05:40:12] 2025-04-06 09:39:47,972 | INFO     | ..............................
[2025-04-06 05:40:12] 2025-04-06 09:39:47,972 | INFO     | . Timing measurements:
[2025-04-06 05:40:12] 2025-04-06 09:39:47,972 | INFO     | . get job = 1 s
[2025-04-06 05:40:12] 2025-04-06 09:39:47,972 | INFO     | . initial setup = 7 s
[2025-04-06 05:40:12] 2025-04-06 09:39:47,972 | INFO     | . payload setup = 69 s
[2025-04-06 05:40:12] 2025-04-06 09:39:47,972 | INFO     | . stage-in = 0 s
[2025-04-06 05:40:12] 2025-04-06 09:39:47,972 | INFO     | . payload execution = 75753 s
[2025-04-06 05:40:12] 2025-04-06 09:39:47,973 | INFO     | . stage-out = 5 s
[2025-04-06 05:40:12] 2025-04-06 09:39:47,973 | INFO     | . log creation = 1 s
[2025-04-06 05:40:12] 2025-04-06 09:39:47,973 | INFO     | ..............................
[2025-04-06 05:40:12] 2025-04-06 09:39:48,840 | INFO     | 
[2025-04-06 05:40:12] 2025-04-06 09:39:48,840 | INFO     | job summary report
[2025-04-06 05:40:12] 2025-04-06 09:39:48,840 | INFO     | --------------------------------------------------
[2025-04-06 05:40:12] 2025-04-06 09:39:48,840 | INFO     | PanDA job id: 6587182171
[2025-04-06 05:40:12] 2025-04-06 09:39:48,840 | INFO     | task id: 43634898
[2025-04-06 05:40:12] 2025-04-06 09:39:48,840 | INFO     | errors: (none)
[2025-04-06 05:40:12] 2025-04-06 09:39:48,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-06 05:40:12] 2025-04-06 09:39:48,840 | INFO     | pilot state: finished 
[2025-04-06 05:40:12] 2025-04-06 09:39:48,841 | INFO     | transexitcode: 0
[2025-04-06 05:40:12] 2025-04-06 09:39:48,841 | INFO     | exeerrorcode: 0
[2025-04-06 05:40:12] 2025-04-06 09:39:48,841 | INFO     | exeerrordiag: 
[2025-04-06 05:40:12] 2025-04-06 09:39:48,841 | INFO     | exitcode: 0
[2025-04-06 05:40:12] 2025-04-06 09:39:48,841 | INFO     | exitmsg: OK
[2025-04-06 05:40:12] 2025-04-06 09:39:48,841 | INFO     | cpuconsumptiontime: 99456 s
[2025-04-06 05:40:12] 2025-04-06 09:39:48,841 | INFO     | nevents: 400
[2025-04-06 05:40:12] 2025-04-06 09:39:48,841 | INFO     | neventsw: 0
[2025-04-06 05:40:12] 2025-04-06 09:39:48,841 | INFO     | pid: 25418
[2025-04-06 05:40:12] 2025-04-06 09:39:48,841 | INFO     | pgrp: 25418
[2025-04-06 05:40:12] 2025-04-06 09:39:48,842 | INFO     | corecount: 10
[2025-04-06 05:40:12] 2025-04-06 09:39:48,842 | INFO     | event service: False
[2025-04-06 05:40:12] 2025-04-06 09:39:48,842 | INFO     | sizes: {0: 2416521, 1: 2417206, 2: 2417291, 3: 2417405, 13: 2417433, 25: 2417489, 36: 2417645, 48: 2417673, 50: 2417907, 59: 2417935, 75826: 2474430, 75833: 248337
[2025-04-06 05:40:12] 2025-04-06 09:39:48,842 | INFO     | --------------------------------------------------
[2025-04-06 05:40:12] 2025-04-06 09:39:48,842 | INFO     | 
[2025-04-06 05:40:12] 2025-04-06 09:39:48,842 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-06 05:40:12] 2025-04-06 09:39:49,300 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,301 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,301 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,301 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,302 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,302 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,302 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,302 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-06 05:40:12] 2025-04-06 09:39:49,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,303 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-06 05:40:12] 2025-04-06 09:39:49,303 | INFO     | job 6587182171 has completed (purged errors)
[2025-04-06 05:40:12] 2025-04-06 09:39:49,303 | INFO     | overall cleanup function is called
[2025-04-06 05:40:12] 2025-04-06 09:39:50,326 | INFO     | --- collectZombieJob: --- 10, [25418]
[2025-04-06 05:40:12] 2025-04-06 09:39:50,326 | INFO     | zombie collector waiting for pid 25418
[2025-04-06 05:40:12] 2025-04-06 09:39:50,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-06 05:40:12] 2025-04-06 09:39:50,326 | INFO     | collected zombie processes
[2025-04-06 05:40:12] 2025-04-06 09:39:50,326 | INFO     | will attempt to kill all subprocesses of pid=25418
[2025-04-06 05:40:12] 2025-04-06 09:39:54,033 | INFO     | PID=37147 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-06 05:40:12] 2025-04-06 09:39:54,034 | INFO     | .. there are 20 such processes running
[2025-04-06 05:40:12] 2025-04-06 09:39:55,106 | INFO     | process IDs to be killed: [25418] (in reverse order)
[2025-04-06 05:40:12] 2025-04-06 09:39:55,555 | WARNING  | found no corresponding commands to process id(s)
[2025-04-06 05:40:12] 2025-04-06 09:39:55,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-06 05:40:12] 2025-04-06 09:39:55,567 | INFO     | did not find any defunct processes belonging to 25418
[2025-04-06 05:40:12] 2025-04-06 09:39:55,578 | INFO     | did not find any defunct processes belonging to 25418
[2025-04-06 05:40:12] 2025-04-06 09:39:55,579 | INFO     | ready for new job
[2025-04-06 05:40:12] 2025-04-06 09:39:55,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-06 05:40:12] 2025-04-06 09:39:55,583 | INFO     | **************************************
[2025-04-06 05:40:12] 2025-04-06 09:39:55,583 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-06 05:40:12] 2025-04-06 09:39:55,584 | INFO     | **************************************
[2025-04-06 05:40:12] 2025-04-06 09:39:55,584 | INFO     | 
[2025-04-06 05:40:12] 2025-04-06 09:39:55,586 | INFO     | architecture information:
[2025-04-06 05:40:12] 2025-04-06 09:39:55,587 | INFO     | executing command: cat /etc/os-release
[2025-04-06 05:40:12] 2025-04-06 09:39:55,609 | INFO     | cat /etc/os-release:
[2025-04-06 05:40:12] NAME="CentOS Linux"
[2025-04-06 05:40:12] VERSION="7 (Core)"
[2025-04-06 05:40:12] ID="centos"
[2025-04-06 05:40:12] ID_LIKE="rhel fedora"
[2025-04-06 05:40:12] VERSION_ID="7"
[2025-04-06 05:40:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-06 05:40:12] ANSI_COLOR="0;31"
[2025-04-06 05:40:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-06 05:40:12] HOME_URL="https://www.centos.org/"
[2025-04-06 05:40:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-06 05:40:12] 
[2025-04-06 05:40:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-06 05:40:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-06 05:40:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-06 05:40:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-06 05:40:12] 
[2025-04-06 05:40:12] 2025-04-06 09:39:55,609 | INFO     | **************************************
[2025-04-06 05:40:12] 2025-04-06 09:39:56,113 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-06 05:40:12] 2025-04-06 09:39:56,341 | INFO     | sufficient remaining disk space (56142856192 B)
[2025-04-06 05:40:12] 2025-04-06 09:39:56,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-06 05:40:12] 2025-04-06 09:39:56,341 | INFO     | current server update state: UPDATING_FINAL
[2025-04-06 05:40:12] 2025-04-06 09:39:56,341 | INFO     | update_server=False
[2025-04-06 05:40:12] 2025-04-06 09:39:56,341 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-06 05:40:12] 2025-04-06 09:39:56,356 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-06 05:40:12] 2025-04-06 09:39:56,356 | INFO     | found 0 job(s) in 20 queues
[2025-04-06 05:40:12] 2025-04-06 09:39:56,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-06 05:40:12] 2025-04-06 09:39:56,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-06 05:40:12] 2025-04-06 09:39:56,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-06 05:40:12] 2025-04-06 09:39:56,357 | INFO     | aborting loop
[2025-04-06 05:40:12] 2025-04-06 09:39:56,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-06 05:40:12] 2025-04-06 09:39:56,810 | INFO     | all payload control threads have been joined
[2025-04-06 05:40:12] 2025-04-06 09:39:57,220 | INFO     | all data control threads have been joined
[2025-04-06 05:40:12] 2025-04-06 09:39:57,348 | INFO     | [job] retrieve thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:57,362 | INFO     | [job] job monitor thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:57,366 | INFO     | [payload] failed_post thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:57,559 | INFO     | [job] create_data_payload thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:57,816 | INFO     | [payload] control thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:57,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-06 05:40:12] 2025-04-06 09:39:57,918 | INFO     | all job control threads have been joined
[2025-04-06 05:40:12] 2025-04-06 09:39:58,006 | INFO     | [payload] validate_pre thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:58,013 | INFO     | [data] copytool_in thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:58,210 | INFO     | [job] validate thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:58,226 | INFO     | [data] control thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:58,401 | INFO     | [data] copytool_out thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:58,410 | INFO     | [payload] execute_payloads thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:58,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:58,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-06 05:40:12] 2025-04-06 09:39:58,821 | INFO     | [payload] validate_post thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:58,905 | INFO     | [job] queue monitor thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:39:58,924 | INFO     | [job] control thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:40:02,777 | INFO     | [data] queue_monitor thread has finished
[2025-04-06 05:40:12] 2025-04-06 09:40:04,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140511162238784)>', '<ExcThread(monitor, started 140510450673408)>']
[2025-04-06 05:40:12] 2025-04-06 09:40:04,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-06 05:40:12] 2025-04-06 09:40:04,403 | INFO     | [monitor] control thread has ended
[2025-04-06 05:40:12] 2025-04-06 09:40:09,224 | INFO     | all workflow threads have been joined
[2025-04-06 05:40:12] 2025-04-06 09:40:09,224 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-06 05:40:12] 2025-04-06 09:40:09,224 | INFO     | traces error code: 0
[2025-04-06 05:40:12] 2025-04-06 09:40:09,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-06 05:40:12] 2025-04-06 09:40:10,429 [wrapper] ==== pilot stdout END ====
[2025-04-06 05:40:12] 2025-04-06 09:40:10,464 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-06 05:40:12] 2025-04-06 09:40:10,512 [wrapper] pilotpid: 37147
[2025-04-06 05:40:12] 2025-04-06 09:40:10,665 [wrapper] Pilot exit status: 0
[2025-04-06 05:40:12] 2025-04-06 09:40:10,904 [wrapper] pandaids: 6587182171
[2025-04-06 05:40:12] 2025-04-06 09:40:11,096 [wrapper] cleanup supervisor_pilot 17290 37148
[2025-04-06 05:40:12] 2025-04-06 09:40:11,103 [wrapper] Test setup, not cleaning
[2025-04-06 05:40:12] 2025-04-06 09:40:11,106 [wrapper] apfmon messages muted
[2025-04-06 05:40:12] 2025-04-06 09:40:11,110 [wrapper] ==== wrapper stdout END ====
[2025-04-06 05:40:12] 2025-04-06 09:40:11,115 [wrapper] ==== wrapper stderr END ====
[2025-04-06 05:40:12]  *** Error codes and diagnostics ***
[2025-04-06 05:40:12]     "exeErrorCode": 0,
[2025-04-06 05:40:12]     "exeErrorDiag": "",
[2025-04-06 05:40:12]     "pilotErrorCode": 0,
[2025-04-06 05:40:12]     "pilotErrorDiag": "",
[2025-04-06 05:40:12]  *** Listing of results directory ***
[2025-04-06 05:40:12] total 677184
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas    495897 Apr  4 01:12 pilot3.tar.gz
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas      5111 Apr  4 01:24 queuedata.json
[2025-04-06 05:40:12] -rwx------ 1 boincer umatlas     37140 Apr  4 01:26 runpilot2-wrapper.sh
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas       100 Apr  5 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-06 05:40:12] -rwxr-xr-x 1 boincer umatlas      7986 Apr  5 08:30 run_atlas
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas       105 Apr  5 08:30 job.xml
[2025-04-06 05:40:12] -rw-r--r-- 2 boincer umatlas 361151858 Apr  5 08:30 EVNT.43634896._000801.pool.root.1
[2025-04-06 05:40:12] -rw-r--r-- 2 boincer umatlas    508888 Apr  5 08:30 input.tar.gz
[2025-04-06 05:40:12] -rw-r--r-- 2 boincer umatlas     17569 Apr  5 08:30 start_atlas.sh
[2025-04-06 05:40:12] drwxrwx--x 2 boincer umatlas      4096 Apr  5 08:30 shared
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas         0 Apr  5 08:30 boinc_lockfile
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas      2599 Apr  5 08:30 pandaJob.out
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas       467 Apr  5 08:31 setup.sh.local
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas    979987 Apr  5 08:32 agis_schedconf.cvmfs.json
[2025-04-06 05:40:12] drwx------ 4 boincer umatlas      4096 Apr  5 08:32 pilot3
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas 315787434 Apr  6 05:37 HITS.43634898._020993.pool.root.1
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas       533 Apr  6 05:37 boinc_task_state.xml
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas      1060 Apr  6 05:38 memory_monitor_summary.json
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas   1603525 Apr  6 05:38 agis_ddmendpoints.agis.ALL.json
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas    919349 Apr  6 05:38 log.43634898._020993.job.log.tgz.1
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas        95 Apr  6 05:39 pilot_heartbeat.json
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas      6230 Apr  6 05:39 init_data.xml
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas      7755 Apr  6 05:39 heartbeat.json
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas      8192 Apr  6 05:40 boinc_mmap_file
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas      4476 Apr  6 05:40 pilotlog.txt
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas        29 Apr  6 05:40 wrapper_checkpoint.txt
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas   5410102 Apr  6 05:40 log.43634898._020993.job.log.1
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas       357 Apr  6 05:40 output.list
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas       620 Apr  6 05:40 runtime_log
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas   6348800 Apr  6 05:40 result.tar.gz
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas     11421 Apr  6 05:40 runtime_log.err
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas       666 Apr  6 05:40 4YJLDmgkoK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmOiILDmYSjXWn.diag
[2025-04-06 05:40:12] -rw-r--r-- 1 boincer umatlas     21118 Apr  6 05:40 stderr.txt
[2025-04-06 05:40:12] HITS file was successfully produced:
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas 315787434 Apr  6 05:37 shared/HITS.pool.root.1
[2025-04-06 05:40:12]  *** Contents of shared directory: ***
[2025-04-06 05:40:12] total 667804
[2025-04-06 05:40:12] -rw-r--r-- 2 boincer umatlas 361151858 Apr  5 08:30 ATLAS.root_0
[2025-04-06 05:40:12] -rw-r--r-- 2 boincer umatlas    508888 Apr  5 08:30 input.tar.gz
[2025-04-06 05:40:12] -rw-r--r-- 2 boincer umatlas     17569 Apr  5 08:30 start_atlas.sh
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas 315787434 Apr  6 05:37 HITS.pool.root.1
[2025-04-06 05:40:12] -rw------- 1 boincer umatlas   6348800 Apr  6 05:40 result.tar.gz
05:40:14 (15937): run_atlas exited; CPU time 101577.182791
05:40:14 (15937): called boinc_finish(0)

</stderr_txt>
]]>

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