Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:13:19 (119795): wrapper (7.7.26015): starting
16:13:19 (119795): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 16:13:19] Arguments: --nthreads 8
[2025-04-04 16:13:19] Threads: 8
[2025-04-04 16:13:19] Checking for CVMFS
[2025-04-04 16:13:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 16:13:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 16:13:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 16:13:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 16:13:22] 2.11.2.0 135154 21095 184152 144501 3 305 17213890 18432001 23292 130560 0 113353125 99.098 209298406 41790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-04 16:13:22] CVMFS is ok
[2025-04-04 16:13:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 16:13:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 16:13:22] Further information can be found at the LHC@home message board.
[2025-04-04 16:13:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 16:13:22] Checking for apptainer binary...
[2025-04-04 16:13:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 16:13:22] Running /usr/bin/apptainer --version
[2025-04-04 16:13:23] apptainer version 1.3.2-1.el7
[2025-04-04 16:13:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 16:13:43] c-211-35-3.aglt2.org
[2025-04-04 16:13:43] apptainer works
[2025-04-04 16:13:43] Set ATHENA_PROC_NUMBER=8
[2025-04-04 16:13:43] Set ATHENA_CORE_NUMBER=8
[2025-04-04 16:13:44] Starting ATLAS job with PandaID=6585593054
[2025-04-04 16:13:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-05 00:18:43]  *** The last 200 lines of the pilot log: ***
[2025-04-05 00:18:43] 2025-04-05 04:18:22,575 | INFO     | mean y: 2486397.543103448
[2025-04-05 00:18:43] 2025-04-05 04:18:22,575 | INFO     | -- intersect: -24406692256.197414
[2025-04-05 00:18:43] 2025-04-05 04:18:22,575 | INFO     | intersect: -24406692256.197414
[2025-04-05 00:18:43] 2025-04-05 04:18:22,576 | INFO     | chi2: 10.455553728371974
[2025-04-05 00:18:43] 2025-04-05 04:18:22,576 | INFO     | current chi2=10.455553728371974 (change=33.43908420567821 %)
[2025-04-05 00:18:43] 2025-04-05 04:18:22,577 | INFO     | sum of square deviations: 29986158883.402985
[2025-04-05 00:18:43] 2025-04-05 04:18:22,582 | INFO     | sum of deviations: 290345321606.23553
[2025-04-05 00:18:43] 2025-04-05 04:18:22,589 | INFO     | mean x: 1743812671.1721132
[2025-04-05 00:18:43] 2025-04-05 04:18:22,589 | INFO     | mean y: 2508446.705882353
[2025-04-05 00:18:43] 2025-04-05 04:18:22,589 | INFO     | -- intersect: -16882210026.280392
[2025-04-05 00:18:43] 2025-04-05 04:18:22,589 | INFO     | intersect: -16882210026.280392
[2025-04-05 00:18:43] 2025-04-05 04:18:22,590 | INFO     | chi2: 6.887194497206666
[2025-04-05 00:18:43] 2025-04-05 04:18:22,590 | INFO     | current chi2=6.887194497206666 (change=34.1288402687108 %)
[2025-04-05 00:18:43] 2025-04-05 04:18:22,591 | INFO     | sum of square deviations: 29016842195.753323
[2025-04-05 00:18:43] 2025-04-05 04:18:22,597 | INFO     | sum of deviations: 174875392483.89423
[2025-04-05 00:18:43] 2025-04-05 04:18:22,598 | INFO     | mean x: 1743812823.6740088
[2025-04-05 00:18:43] 2025-04-05 04:18:22,598 | INFO     | mean y: 2526604.4317180617
[2025-04-05 00:18:43] 2025-04-05 04:18:22,598 | INFO     | -- intersect: -10506885477.737244
[2025-04-05 00:18:43] 2025-04-05 04:18:22,598 | INFO     | intersect: -10506885477.737244
[2025-04-05 00:18:43] 2025-04-05 04:18:22,599 | INFO     | chi2: 4.640798799124843
[2025-04-05 00:18:43] 2025-04-05 04:18:22,599 | INFO     | current chi2=4.640798799124843 (change=32.61699228899263 %)
[2025-04-05 00:18:43] 2025-04-05 04:18:22,599 | INFO     | sum of square deviations: 28068642183.100163
[2025-04-05 00:18:43] 2025-04-05 04:18:22,604 | INFO     | sum of deviations: 81545558650.15364
[2025-04-05 00:18:43] 2025-04-05 04:18:22,605 | INFO     | mean x: 1743812976.1759465
[2025-04-05 00:18:43] 2025-04-05 04:18:22,605 | INFO     | mean y: 2541610.40311804
[2025-04-05 00:18:43] 2025-04-05 04:18:22,605 | INFO     | -- intersect: -5063617357.887549
[2025-04-05 00:18:43] 2025-04-05 04:18:22,605 | INFO     | intersect: -5063617357.887549
[2025-04-05 00:18:43] 2025-04-05 04:18:22,606 | INFO     | chi2: 3.2040924627215817
[2025-04-05 00:18:43] 2025-04-05 04:18:22,606 | INFO     | current chi2=3.2040924627215817 (change=30.95816902629336 %)
[2025-04-05 00:18:43] 2025-04-05 04:18:22,606 | INFO     | sum of square deviations: 27141326282.943897
[2025-04-05 00:18:43] 2025-04-05 04:18:22,612 | INFO     | sum of deviations: -5402448856.130623
[2025-04-05 00:18:43] 2025-04-05 04:18:22,612 | INFO     | mean x: 1743813128.677928
[2025-04-05 00:18:43] 2025-04-05 04:18:22,612 | INFO     | mean y: 2555909.292792793
[2025-04-05 00:18:43] 2025-04-05 04:18:22,612 | INFO     | -- intersect: 349659847.54992485
[2025-04-05 00:18:43] 2025-04-05 04:18:22,612 | INFO     | intersect: 349659847.54992485
[2025-04-05 00:18:43] 2025-04-05 04:18:22,613 | INFO     | chi2: 1.9594875495581303
[2025-04-05 00:18:43] 2025-04-05 04:18:22,613 | INFO     | current chi2=1.9594875495581303 (change=38.84422586563791 %)
[2025-04-05 00:18:43] 2025-04-05 04:18:22,614 | INFO     | sum of square deviations: 26234689260.141174
[2025-04-05 00:18:43] 2025-04-05 04:18:22,618 | INFO     | sum of deviations: -43266996347.93849
[2025-04-05 00:18:43] 2025-04-05 04:18:22,619 | INFO     | mean x: 1743813281.1776764
[2025-04-05 00:18:43] 2025-04-05 04:18:22,619 | INFO     | mean y: 2562268.8838268793
[2025-04-05 00:18:43] 2025-04-05 04:18:22,619 | INFO     | -- intersect: 2878508773.1495743
[2025-04-05 00:18:43] 2025-04-05 04:18:22,619 | INFO     | intersect: 2878508773.1495743
[2025-04-05 00:18:43] 2025-04-05 04:18:22,620 | INFO     | chi2: 1.7068717721578888
[2025-04-05 00:18:43] 2025-04-05 04:18:22,620 | INFO     | current chi2=1.7068717721578888 (change=12.89193072225476 %)
[2025-04-05 00:18:43] 2025-04-05 04:18:22,620 | INFO     | left removable region: 60
[2025-04-05 00:18:43] 2025-04-05 04:18:22,621 | INFO     | sum of square deviations: 20295370822.287773
[2025-04-05 00:18:43] 2025-04-05 04:18:22,625 | INFO     | sum of deviations: 30004698174.62532
[2025-04-05 00:18:43] 2025-04-05 04:18:22,625 | INFO     | mean x: 1743814013.191067
[2025-04-05 00:18:43] 2025-04-05 04:18:22,626 | INFO     | mean y: 2569781.1736972705
[2025-04-05 00:18:43] 2025-04-05 04:18:22,626 | INFO     | -- intersect: -2575486741.992705
[2025-04-05 00:18:43] 2025-04-05 04:18:22,626 | INFO     | intersect: -2575486741.992705
[2025-04-05 00:18:43] 2025-04-05 04:18:22,626 | INFO     | chi2: 0.0019895265801515415
[2025-04-05 00:18:43] 2025-04-05 04:18:22,627 | INFO     | -- intersect: -2575486741.992705
[2025-04-05 00:18:43] 2025-04-05 04:18:22,627 | INFO     | current memory leak: 1.48 B/s (using 403 data points, chi2=0.00)
[2025-04-05 00:18:43] 2025-04-05 04:18:22,628 | INFO     | ..............................
[2025-04-05 00:18:43] 2025-04-05 04:18:22,628 | INFO     | . Timing measurements:
[2025-04-05 00:18:43] 2025-04-05 04:18:22,628 | INFO     | . get job = 0 s
[2025-04-05 00:18:43] 2025-04-05 04:18:22,628 | INFO     | . initial setup = 9 s
[2025-04-05 00:18:43] 2025-04-05 04:18:22,628 | INFO     | . payload setup = 101 s
[2025-04-05 00:18:43] 2025-04-05 04:18:22,628 | INFO     | . stage-in = 0 s
[2025-04-05 00:18:43] 2025-04-05 04:18:22,628 | INFO     | . payload execution = 28680 s
[2025-04-05 00:18:43] 2025-04-05 04:18:22,628 | INFO     | . stage-out = 8 s
[2025-04-05 00:18:43] 2025-04-05 04:18:22,629 | INFO     | . log creation = 1 s
[2025-04-05 00:18:43] 2025-04-05 04:18:22,629 | INFO     | ..............................
[2025-04-05 00:18:43] 2025-04-05 04:18:22,741 | INFO     | 
[2025-04-05 00:18:43] 2025-04-05 04:18:22,741 | INFO     | job summary report
[2025-04-05 00:18:43] 2025-04-05 04:18:22,741 | INFO     | --------------------------------------------------
[2025-04-05 00:18:43] 2025-04-05 04:18:22,741 | INFO     | PanDA job id: 6585593054
[2025-04-05 00:18:43] 2025-04-05 04:18:22,741 | INFO     | task id: 43634898
[2025-04-05 00:18:43] 2025-04-05 04:18:22,741 | INFO     | errors: (none)
[2025-04-05 00:18:43] 2025-04-05 04:18:22,741 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-05 00:18:43] 2025-04-05 04:18:22,741 | INFO     | pilot state: finished 
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | transexitcode: 0
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | exeerrorcode: 0
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | exeerrordiag: 
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | exitcode: 0
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | exitmsg: OK
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | cpuconsumptiontime: 89917 s
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | nevents: 400
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | neventsw: 0
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | pid: 164138
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | pgrp: 164138
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | corecount: 8
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | event service: False
[2025-04-05 00:18:43] 2025-04-05 04:18:22,742 | INFO     | sizes: {0: 2417119, 1: 2417374, 12: 2417374, 23: 2417402, 34: 2417430, 45: 2417458, 53: 2417820, 56: 2417848, 28785: 2454399, 28786: 2454398, 28796: 2463395, 28797
[2025-04-05 00:18:43] 2025-04-05 04:18:22,743 | INFO     | --------------------------------------------------
[2025-04-05 00:18:43] 2025-04-05 04:18:22,743 | INFO     | 
[2025-04-05 00:18:43] 2025-04-05 04:18:22,743 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-05 00:18:43] 2025-04-05 04:18:22,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,851 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,851 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-05 00:18:43] 2025-04-05 04:18:22,851 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,851 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-05 00:18:43] 2025-04-05 04:18:22,851 | INFO     | job 6585593054 has completed (purged errors)
[2025-04-05 00:18:43] 2025-04-05 04:18:22,851 | INFO     | overall cleanup function is called
[2025-04-05 00:18:43] 2025-04-05 04:18:23,868 | INFO     | --- collectZombieJob: --- 10, [164138]
[2025-04-05 00:18:43] 2025-04-05 04:18:23,868 | INFO     | zombie collector waiting for pid 164138
[2025-04-05 00:18:43] 2025-04-05 04:18:23,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-05 00:18:43] 2025-04-05 04:18:23,873 | INFO     | collected zombie processes
[2025-04-05 00:18:43] 2025-04-05 04:18:23,873 | INFO     | will attempt to kill all subprocesses of pid=164138
[2025-04-05 00:18:43] 2025-04-05 04:18:25,366 | INFO     | process IDs to be killed: [164138] (in reverse order)
[2025-04-05 00:18:43] 2025-04-05 04:18:26,001 | WARNING  | found no corresponding commands to process id(s)
[2025-04-05 00:18:43] 2025-04-05 04:18:26,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-05 00:18:43] 2025-04-05 04:18:26,035 | INFO     | did not find any defunct processes belonging to 164138
[2025-04-05 00:18:43] 2025-04-05 04:18:26,073 | INFO     | did not find any defunct processes belonging to 164138
[2025-04-05 00:18:43] 2025-04-05 04:18:26,073 | INFO     | ready for new job
[2025-04-05 00:18:43] 2025-04-05 04:18:26,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-05 00:18:43] 2025-04-05 04:18:26,076 | INFO     | **************************************
[2025-04-05 00:18:43] 2025-04-05 04:18:26,081 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-05 00:18:43] 2025-04-05 04:18:26,081 | INFO     | **************************************
[2025-04-05 00:18:43] 2025-04-05 04:18:26,081 | INFO     | 
[2025-04-05 00:18:43] 2025-04-05 04:18:26,117 | INFO     | architecture information:
[2025-04-05 00:18:43] 2025-04-05 04:18:26,118 | INFO     | executing command: cat /etc/os-release
[2025-04-05 00:18:43] 2025-04-05 04:18:26,274 | INFO     | cat /etc/os-release:
[2025-04-05 00:18:43] NAME="CentOS Linux"
[2025-04-05 00:18:43] VERSION="7 (Core)"
[2025-04-05 00:18:43] ID="centos"
[2025-04-05 00:18:43] ID_LIKE="rhel fedora"
[2025-04-05 00:18:43] VERSION_ID="7"
[2025-04-05 00:18:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-05 00:18:43] ANSI_COLOR="0;31"
[2025-04-05 00:18:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-05 00:18:43] HOME_URL="https://www.centos.org/"
[2025-04-05 00:18:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-05 00:18:43] 
[2025-04-05 00:18:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-05 00:18:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-05 00:18:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-05 00:18:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-05 00:18:43] 
[2025-04-05 00:18:43] 2025-04-05 04:18:26,275 | INFO     | **************************************
[2025-04-05 00:18:43] 2025-04-05 04:18:26,323 | INFO     | PID=137712 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-05 00:18:43] 2025-04-05 04:18:26,323 | INFO     | .. there are 20 such processes running
[2025-04-05 00:18:43] 2025-04-05 04:18:26,779 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-05 00:18:43] 2025-04-05 04:18:26,989 | INFO     | sufficient remaining disk space (105187901440 B)
[2025-04-05 00:18:43] 2025-04-05 04:18:26,990 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-05 00:18:43] 2025-04-05 04:18:26,990 | INFO     | current server update state: UPDATING_FINAL
[2025-04-05 00:18:43] 2025-04-05 04:18:26,990 | INFO     | update_server=False
[2025-04-05 00:18:43] 2025-04-05 04:18:26,990 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-05 00:18:43] 2025-04-05 04:18:26,997 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-05 00:18:43] 2025-04-05 04:18:26,998 | INFO     | found 0 job(s) in 20 queues
[2025-04-05 00:18:43] 2025-04-05 04:18:26,998 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-05 00:18:43] 2025-04-05 04:18:26,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-05 00:18:43] 2025-04-05 04:18:27,134 | INFO     | all data control threads have been joined
[2025-04-05 00:18:43] 2025-04-05 04:18:27,297 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-05 00:18:43] 2025-04-05 04:18:27,298 | INFO     | aborting loop
[2025-04-05 00:18:43] 2025-04-05 04:18:27,332 | INFO     | all payload control threads have been joined
[2025-04-05 00:18:43] 2025-04-05 04:18:27,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-05 00:18:43] 2025-04-05 04:18:27,996 | INFO     | [job] retrieve thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:28,111 | INFO     | [payload] failed_post thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:28,140 | INFO     | [data] control thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:28,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-05 00:18:43] 2025-04-05 04:18:28,287 | INFO     | [payload] validate_post thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:28,303 | INFO     | [job] job monitor thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:28,342 | INFO     | [payload] control thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:28,656 | INFO     | all job control threads have been joined
[2025-04-05 00:18:43] 2025-04-05 04:18:28,716 | INFO     | [payload] execute_payloads thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:28,750 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:28,754 | INFO     | [job] create_data_payload thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:28,779 | INFO     | [job] queue monitor thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:28,819 | INFO     | [job] validate thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:29,265 | INFO     | [payload] validate_pre thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:29,326 | INFO     | [data] copytool_in thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:29,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-05 00:18:43] 2025-04-05 04:18:29,662 | INFO     | [job] control thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:30,266 | INFO     | [data] copytool_out thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:33,483 | INFO     | [data] queue_monitor thread has finished
[2025-04-05 00:18:43] 2025-04-05 04:18:34,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140667477215040)>', '<ExcThread(monitor, started 140667183408896)>']
[2025-04-05 00:18:43] 2025-04-05 04:18:35,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-05 00:18:43] 2025-04-05 04:18:35,047 | INFO     | [monitor] control thread has ended
[2025-04-05 00:18:43] 2025-04-05 04:18:39,806 | INFO     | all workflow threads have been joined
[2025-04-05 00:18:43] 2025-04-05 04:18:39,806 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-05 00:18:43] 2025-04-05 04:18:39,807 | INFO     | traces error code: 0
[2025-04-05 00:18:43] 2025-04-05 04:18:39,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-05 00:18:43] 2025-04-05 04:18:41,659 [wrapper] ==== pilot stdout END ====
[2025-04-05 00:18:43] 2025-04-05 04:18:41,699 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-05 00:18:43] 2025-04-05 04:18:41,720 [wrapper] pilotpid: 137712
[2025-04-05 00:18:43] 2025-04-05 04:18:41,742 [wrapper] Pilot exit status: 0
[2025-04-05 00:18:43] 2025-04-05 04:18:41,855 [wrapper] pandaids: 6585593054
[2025-04-05 00:18:43] 2025-04-05 04:18:41,945 [wrapper] cleanup supervisor_pilot 110614 137713
[2025-04-05 00:18:43] 2025-04-05 04:18:41,952 [wrapper] Test setup, not cleaning
[2025-04-05 00:18:43] 2025-04-05 04:18:41,956 [wrapper] apfmon messages muted
[2025-04-05 00:18:43] 2025-04-05 04:18:41,962 [wrapper] ==== wrapper stdout END ====
[2025-04-05 00:18:43] 2025-04-05 04:18:42,003 [wrapper] ==== wrapper stderr END ====
[2025-04-05 00:18:43]  *** Error codes and diagnostics ***
[2025-04-05 00:18:43]     "exeErrorCode": 0,
[2025-04-05 00:18:43]     "exeErrorDiag": "",
[2025-04-05 00:18:43]     "pilotErrorCode": 0,
[2025-04-05 00:18:43]     "pilotErrorDiag": "",
[2025-04-05 00:18:43]  *** Listing of results directory ***
[2025-04-05 00:18:43] total 676952
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas    495897 Apr  3 11:58 pilot3.tar.gz
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas      5111 Apr  3 12:09 queuedata.json
[2025-04-05 00:18:43] -rwx------ 1 boincer umatlas     37140 Apr  3 12:10 runpilot2-wrapper.sh
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas       100 Apr  4 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-05 00:18:43] -rwxr-xr-x 1 boincer umatlas      7986 Apr  4 16:13 run_atlas
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas       105 Apr  4 16:13 job.xml
[2025-04-05 00:18:43] -rw-r--r-- 2 boincer umatlas 356544529 Apr  4 16:13 EVNT.43634896._000236.pool.root.1
[2025-04-05 00:18:43] -rw-r--r-- 2 boincer umatlas     17569 Apr  4 16:13 start_atlas.sh
[2025-04-05 00:18:43] drwxrwx--x 2 boincer umatlas      4096 Apr  4 16:13 shared
[2025-04-05 00:18:43] -rw-r--r-- 2 boincer umatlas    508899 Apr  4 16:13 input.tar.gz
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas         0 Apr  4 16:13 boinc_lockfile
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas      2598 Apr  4 16:13 pandaJob.out
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas       424 Apr  4 16:14 setup.sh.local
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas    979987 Apr  4 16:15 agis_schedconf.cvmfs.json
[2025-04-05 00:18:43] drwx------ 4 boincer umatlas      4096 Apr  4 16:15 pilot3
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas      6300 Apr  5 00:11 init_data.xml
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas 327082950 Apr  5 00:15 HITS.43634898._015647.pool.root.1
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas       532 Apr  5 00:15 boinc_task_state.xml
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas      1066 Apr  5 00:17 memory_monitor_summary.json
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas   1603525 Apr  5 00:17 agis_ddmendpoints.agis.ALL.json
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas    511421 Apr  5 00:17 log.43634898._015647.job.log.tgz.1
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas        95 Apr  5 00:17 pilot_heartbeat.json
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas      7769 Apr  5 00:18 heartbeat.json
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas      8192 Apr  5 00:18 boinc_mmap_file
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas        28 Apr  5 00:18 wrapper_checkpoint.txt
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas      4871 Apr  5 00:18 pilotlog.txt
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas   2352541 Apr  5 00:18 log.43634898._015647.job.log.1
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas       357 Apr  5 00:18 output.list
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas       620 Apr  5 00:18 runtime_log
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas   2887680 Apr  5 00:18 result.tar.gz
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas     11024 Apr  5 00:18 runtime_log.err
[2025-04-05 00:18:43] -rw------- 1 boincer umatlas       666 Apr  5 00:18 FtfNDm9JcK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmuaHLDmgt31Ln.diag
[2025-04-05 00:18:43] -rw-r--r-- 1 boincer umatlas     21060 Apr  5 00:18 stderr.txt
[2025-04-05 00:18:43] HITS file was successfully produced:
[2025-04-05 00:18:44] -rw------- 1 boincer umatlas 327082950 Apr  5 00:15 shared/HITS.pool.root.1
[2025-04-05 00:18:44]  *** Contents of shared directory: ***
[2025-04-05 00:18:44] total 670956
[2025-04-05 00:18:44] -rw-r--r-- 2 boincer umatlas 356544529 Apr  4 16:13 ATLAS.root_0
[2025-04-05 00:18:44] -rw-r--r-- 2 boincer umatlas     17569 Apr  4 16:13 start_atlas.sh
[2025-04-05 00:18:44] -rw-r--r-- 2 boincer umatlas    508899 Apr  4 16:13 input.tar.gz
[2025-04-05 00:18:44] -rw------- 1 boincer umatlas 327082950 Apr  5 00:15 HITS.pool.root.1
[2025-04-05 00:18:44] -rw------- 1 boincer umatlas   2887680 Apr  5 00:18 result.tar.gz
00:18:45 (119795): run_atlas exited; CPU time 90971.217383
00:18:45 (119795): called boinc_finish(0)

</stderr_txt>
]]>

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