Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-04 12:21:13 (2496): Detected: vboxwrapper 26206
2025-04-04 12:21:13 (2496): Detected: BOINC client v8.0.2
2025-04-04 12:21:14 (2496): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-04 12:21:14 (2496): Successfully copied 'init_data.xml' to the shared directory.
2025-04-04 12:21:15 (2496): Create VM. (boinc_fcbdaa839325ae4d, slot#0)
2025-04-04 12:21:15 (2496): Setting Memory Size for VM. (4400MB)
2025-04-04 12:21:16 (2496): Setting CPU Count for VM. (4)
2025-04-04 12:21:16 (2496): Setting Chipset Options for VM.
2025-04-04 12:21:16 (2496): Setting Graphics Controller Options for VM.
2025-04-04 12:21:16 (2496): Setting Boot Options for VM.
2025-04-04 12:21:17 (2496): Setting Network Configuration for NAT.
2025-04-04 12:21:17 (2496): Enabling VM Network Access.
2025-04-04 12:21:17 (2496): Disabling USB Support for VM.
2025-04-04 12:21:17 (2496): Disabling COM Port Support for VM.
2025-04-04 12:21:18 (2496): Disabling LPT Port Support for VM.
2025-04-04 12:21:18 (2496): Disabling Audio Support for VM.
2025-04-04 12:21:18 (2496): Disabling Clipboard Support for VM.
2025-04-04 12:21:18 (2496): Disabling Drag and Drop Support for VM.
2025-04-04 12:21:19 (2496): Adding storage controller(s) to VM.
2025-04-04 12:21:19 (2496): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-04 12:21:19 (2496): Adding VirtualBox Guest Additions to VM.
2025-04-04 12:21:20 (2496): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-04 12:21:20 (2496): forwarding host port 52207 to guest port 80
2025-04-04 12:21:20 (2496): Enabling remote desktop for VM.
2025-04-04 12:21:20 (2496): Required extension pack not installed, remote desktop not enabled.
2025-04-04 12:21:20 (2496): Enabling shared directory for VM.
2025-04-04 12:21:21 (2496): Starting VM using VBoxManage interface. (boinc_fcbdaa839325ae4d, slot#0)
2025-04-04 12:21:25 (2496): Successfully started VM. (PID = '21084')
2025-04-04 12:21:25 (2496): Reporting VM Process ID to BOINC.
2025-04-04 12:21:25 (2496): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-04 12:21:25 (2496): Guest Log: CPUID EDX: 0x178bfbff
2025-04-04 12:21:25 (2496): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-04 12:21:25 (2496): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-04 12:21:25 (2496): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-04 12:21:25 (2496): Detected: Web Application Enabled (http://localhost:52207)
2025-04-04 12:21:25 (2496): Preference change detected
2025-04-04 12:21:25 (2496): Setting CPU throttle for VM. (100%)
2025-04-04 12:21:26 (2496): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-04 12:21:27 (2496): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-04 12:21:27 (2496): Guest Log: BIOS: Booting from Hard Disk...
2025-04-04 12:21:30 (2496): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-04 12:21:30 (2496): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-04 12:21:30 (2496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-04 12:22:15 (2496): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-04 12:22:15 (2496): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-04 12:22:19 (2496): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-04 12:22:19 (2496): Guest Log: 00:00:00.000088 main     Log opened 2025-04-04T12:22:17.705877000Z
2025-04-04 12:22:19 (2496): Guest Log: 00:00:00.000173 main     OS Product: Linux
2025-04-04 12:22:19 (2496): Guest Log: 00:00:00.000200 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-04 12:22:19 (2496): Guest Log: 00:00:00.000223 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-04 12:22:19 (2496): Guest Log: 00:00:00.000244 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-04 12:22:19 (2496): Guest Log: 00:00:00.000245 main     Process ID: 1309
2025-04-04 12:22:19 (2496): Guest Log: 00:00:00.000245 main     Package type: LINUX_64BITS_GENERIC
2025-04-04 12:22:19 (2496): Guest Log: 00:00:00.000887 main     5.2.32 r132073 started. Verbose level = 0
2025-04-04 12:22:19 (2496): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-04 12:22:19 (2496): Guest Log: [INFO] Mounting shared directory
2025-04-04 12:22:19 (2496): Guest Log: [INFO] Checking for init_data.xml
2025-04-04 12:22:28 (2496): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-04 12:22:28 (2496): Guest Log: [INFO] Detected branch: prod
2025-04-04 12:22:29 (2496): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-04 12:22:29 (2496): Guest Log: Copying input files
2025-04-04 12:22:29 (2496): Guest Log: 00:00:10.015754 timesync vgsvcTimeSyncWorker: Radical guest time change: 17 968 746 228 000ns (GuestNow=1 743 787 306 454 350 000 ns GuestLast=1 743 769 337 708 122 000 ns fSetTimeLastLoop=true )
2025-04-04 12:22:30 (2496): Guest Log: Copied input files into RunAtlas.
2025-04-04 12:22:30 (2496): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-04 12:22:30 (2496): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-04 12:22:30 (2496): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-04 12:22:30 (2496): Guest Log: Further information can be found at the LHC@home message board.
2025-04-04 12:22:37 (2496): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-04 12:22:38 (2496): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-04 12:22:38 (2496): Guest Log: 2.6.3.0 1591 0 32196 144497 4 1 3117321 4096000 0 65024 0 0 n/a 1 1 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-04 12:22:38 (2496): Guest Log: copied the webapp to /var/www
2025-04-04 12:22:38 (2496): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-04 12:22:38 (2496): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-04 12:22:39 (2496): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-04 12:22:39 (2496): Guest Log:  *** Starting ATLAS job. (PandaID=6583796059 taskID=43634898) ***
2025-04-04 14:01:28 (2496): Status Report: Elapsed Time: '6000.000000'
2025-04-04 14:01:28 (2496): Status Report: CPU Time: '18823.468750'
2025-04-04 15:41:31 (2496): Status Report: Elapsed Time: '12000.000000'
2025-04-04 15:41:31 (2496): Status Report: CPU Time: '42724.421875'
2025-04-04 16:26:04 (2496): Guest Log:  *** Job finished ***
2025-04-04 16:26:04 (2496): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:11,365 | INFO     | [job] control thread has finished
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:11,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:15,661 | INFO     | [data] queue_monitor thread has finished
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:17,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679654905664)>', '<ExcThread(monitor, started 139679223498496)>']
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:17,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:17,972 | INFO     | [monitor] control thread has ended
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,320 | INFO     | all workflow threads have been joined
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,320 | INFO     | end of generic workflow (traces error code: 0)
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,320 | INFO     | traces error code: 0
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,389 [wrapper] ==== pilot stdout END ====
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,392 [wrapper] ==== wrapper stdout RESUME ====
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,394 [wrapper] pilotpid: 5932
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,397 [wrapper] Pilot exit status: 0
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,513 [wrapper] pandaids: 6583796059
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,530 [wrapper] cleanup supervisor_pilot 18286 5933
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,533 [wrapper] Test setup, not cleaning
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,535 [wrapper] apfmon messages muted
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,538 [wrapper] ==== wrapper stdout END ====
2025-04-04 16:26:04 (2496): Guest Log: 2025-04-04 21:25:22,540 [wrapper] ==== wrapper stderr END ====
2025-04-04 16:26:04 (2496): Guest Log:  *** Error codes and diagnostics ***
2025-04-04 16:26:04 (2496): Guest Log:     "exeErrorCode": 0,
2025-04-04 16:26:04 (2496): Guest Log:     "exeErrorDiag": "",
2025-04-04 16:26:04 (2496): Guest Log:     "pilotErrorCode": 0,
2025-04-04 16:26:04 (2496): Guest Log:     "pilotErrorDiag": "",
2025-04-04 16:26:04 (2496): Guest Log:  *** Listing of results directory ***
2025-04-04 16:26:04 (2496): Guest Log: total 326504
2025-04-04 16:26:04 (2496): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  2 03:34 pilot3.tar.gz
2025-04-04 16:26:04 (2496): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  2 03:54 queuedata.json
2025-04-04 16:26:04 (2496): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  2 03:54 runpilot2-wrapper.sh
2025-04-04 16:26:04 (2496): Guest Log: -rwxr-xr-x. 1 atlas atlas      9184 Apr  4 17:21 init_data.xml
2025-04-04 16:26:04 (2496): Guest Log: -rwxr-xr-x. 1 atlas atlas    507249 Apr  4 17:21 input.tar.gz
2025-04-04 16:26:04 (2496): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  4 17:21 start_atlas.sh
2025-04-04 16:26:04 (2496): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  4 17:21 EVNT.43634896._000334.pool.root.1 -> /data/./ATLAS.root_0
2025-04-04 16:26:04 (2496): Guest Log: -rw-r--r--. 1 atlas atlas      2599 Apr  4 17:21 pandaJob.out
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas       424 Apr  4 17:22 setup.sh.local
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas    979987 Apr  4 17:23 agis_schedconf.cvmfs.json
2025-04-04 16:26:04 (2496): Guest Log: drwx------. 4 atlas atlas      4096 Apr  4 17:24 pilot3
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas 327356569 Apr  4 21:24 HITS.43634898._010967.pool.root.1
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas      1027 Apr  4 21:24 memory_monitor_summary.json
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas   1603525 Apr  4 21:24 agis_ddmendpoints.agis.ALL.json
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas    322513 Apr  4 21:24 log.43634898._010967.job.log.tgz.1
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas        95 Apr  4 21:24 pilot_heartbeat.json
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas      7680 Apr  4 21:25 heartbeat.json
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas      4402 Apr  4 21:25 pilotlog.txt
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas   1288242 Apr  4 21:25 log.43634898._010967.job.log.1
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas       357 Apr  4 21:25 output.list
2025-04-04 16:26:04 (2496): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  4 21:25 runtime_log
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas   1628160 Apr  4 21:25 result.tar.gz
2025-04-04 16:26:04 (2496): Guest Log: -rw-r--r--. 1 atlas atlas     10954 Apr  4 21:25 runtime_log.err
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas       665 Apr  4 21:25 iO1MDmDM4J7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmNfrKDmebr8hn.diag
2025-04-04 16:26:04 (2496): Guest Log: Looking for outputfile HITS.43634898._010967.pool.root.1
2025-04-04 16:26:04 (2496): Guest Log: HITS file was successfully produced
2025-04-04 16:26:04 (2496): Guest Log: -rw-------. 1 atlas atlas 327356569 Apr  4 21:24 /home/atlas/RunAtlas/HITS.43634898._010967.pool.root.1
2025-04-04 16:26:04 (2496): Guest Log: Successfully finished the ATLAS job!
2025-04-04 16:26:04 (2496): Guest Log: Copying the results back to the shared directory!
2025-04-04 16:26:04 (2496): Guest Log:  *** Contents of shared directory: ***
2025-04-04 16:26:04 (2496): Guest Log: total 671624
2025-04-04 16:26:04 (2496): Guest Log: -rwxrwxrwx. 1 root root 358210991 Apr  4 17:21 ATLAS.root_0
2025-04-04 16:26:04 (2496): Guest Log: -rwxrwxrwx. 1 root root 327356569 Apr  4  2025 HITS.pool.root.1
2025-04-04 16:26:04 (2496): Guest Log: -rwxrwxrwx. 1 root root      9184 Apr  4 17:21 init_data.xml
2025-04-04 16:26:04 (2496): Guest Log: -rwxrwxrwx. 1 root root    507249 Apr  4 17:21 input.tar.gz
2025-04-04 16:26:04 (2496): Guest Log: -rwxrwxrwx. 1 root root   1628160 Apr  4  2025 result.tar.gz
2025-04-04 16:26:04 (2496): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  4 17:21 start_atlas.sh
2025-04-04 16:26:04 (2496): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-04 16:26:04 (2496): VM Completion File Detected.
2025-04-04 16:26:04 (2496): Powering off VM.
2025-04-04 16:26:05 (2496): Successfully stopped VM.
2025-04-04 16:26:05 (2496): Deregistering VM. (boinc_fcbdaa839325ae4d, slot#0)
2025-04-04 16:26:05 (2496): Removing network bandwidth throttle group from VM.
2025-04-04 16:26:05 (2496): Removing VM from VirtualBox.
16:26:10 (2496): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN