Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:12:53 (4118714): wrapper (7.7.26015): starting
13:12:53 (4118714): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 13:12:53] Arguments: --nthreads 8
[2025-04-04 13:12:53] Threads: 8
[2025-04-04 13:12:53] Checking for CVMFS
[2025-04-04 13:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 13:12:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 13:12:54] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 13:12:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 13:12:55] 2.12.6.0 981265 17827 233268 144496 2 622 31494601 32935936 18922 130560 0 12873368 99.582 16836320 21133 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 13:12:55] CVMFS is ok
[2025-04-04 13:12:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 13:12:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 13:12:55] Further information can be found at the LHC@home message board.
[2025-04-04 13:12:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 13:12:55] Checking for apptainer binary...
[2025-04-04 13:12:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 13:12:55] Running /usr/bin/apptainer --version
[2025-04-04 13:12:55] apptainer version 1.4.0-1.el9
[2025-04-04 13:12:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 13:12:56] c6-4-5-1.aglt2.org
[2025-04-04 13:12:56] apptainer works
[2025-04-04 13:12:56] Set ATHENA_PROC_NUMBER=8
[2025-04-04 13:12:56] Set ATHENA_CORE_NUMBER=8
[2025-04-04 13:12:56] Starting ATLAS job with PandaID=6583707830
[2025-04-04 13:12:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 18:30:02]  *** The last 200 lines of the pilot log: ***
[2025-04-04 18:30:02] 2025-04-04 22:29:46,411 | INFO     | -- intersect: -35691141071.07443
[2025-04-04 18:30:02] 2025-04-04 22:29:46,411 | INFO     | intersect: -35691141071.07443
[2025-04-04 18:30:02] 2025-04-04 22:29:46,411 | INFO     | chi2: 2.91268078563138
[2025-04-04 18:30:02] 2025-04-04 22:29:46,411 | INFO     | current chi2=2.91268078563138 (change=48.928028965010526 %)
[2025-04-04 18:30:02] 2025-04-04 22:29:46,412 | INFO     | model: linear, x: [1743787604.0, 1743787666.0, 1743787726.0, 1743787787.0, 1743787848.0, 1743787909.0, 1743787970.0, 1743788031.0, 1743788093.0, 1743788153.0, 1743
[2025-04-04 18:30:02] 2025-04-04 22:29:46,413 | INFO     | sum of square deviations: 8205017344.030175
[2025-04-04 18:30:02] 2025-04-04 22:29:46,415 | INFO     | sum of deviations: 127804749275.46646
[2025-04-04 18:30:02] 2025-04-04 22:29:46,415 | INFO     | mean x: 1743796662.942953
[2025-04-04 18:30:02] 2025-04-04 22:29:46,415 | INFO     | mean y: 2284824.674496644
[2025-04-04 18:30:02] 2025-04-04 22:29:46,415 | INFO     | -- intersect: -27159814406.83684
[2025-04-04 18:30:02] 2025-04-04 22:29:46,415 | INFO     | intersect: -27159814406.83684
[2025-04-04 18:30:02] 2025-04-04 22:29:46,415 | INFO     | chi2: 1.896485614011902
[2025-04-04 18:30:02] 2025-04-04 22:29:46,416 | INFO     | current chi2=1.896485614011902 (change=34.88865572336304 %)
[2025-04-04 18:30:02] 2025-04-04 22:29:46,416 | INFO     | model: linear, x: [1743787909.0, 1743787970.0, 1743788031.0, 1743788093.0, 1743788153.0, 1743788215.0, 1743788276.0, 1743788337.0, 1743788398.0, 1743788459.0, 1743
[2025-04-04 18:30:02] 2025-04-04 22:29:46,416 | INFO     | sum of square deviations: 7798838930.430002
[2025-04-04 18:30:02] 2025-04-04 22:29:46,418 | INFO     | sum of deviations: 85185581516.80548
[2025-04-04 18:30:02] 2025-04-04 22:29:46,418 | INFO     | mean x: 1743796815.447099
[2025-04-04 18:30:02] 2025-04-04 22:29:46,418 | INFO     | mean y: 2300829.5358361774
[2025-04-04 18:30:02] 2025-04-04 22:29:46,418 | INFO     | -- intersect: -19044937752.531445
[2025-04-04 18:30:02] 2025-04-04 22:29:46,419 | INFO     | intersect: -19044937752.531445
[2025-04-04 18:30:02] 2025-04-04 22:29:46,419 | INFO     | chi2: 1.1135418987064778
[2025-04-04 18:30:02] 2025-04-04 22:29:46,419 | INFO     | current chi2=1.1135418987064778 (change=41.28392588484516 %)
[2025-04-04 18:30:02] 2025-04-04 22:29:46,419 | INFO     | model: linear, x: [1743788215.0, 1743788276.0, 1743788337.0, 1743788398.0, 1743788459.0, 1743788519.0, 1743788581.0, 1743788641.0, 1743788705.0, 1743788764.0, 1743
[2025-04-04 18:30:02] 2025-04-04 22:29:46,420 | INFO     | sum of square deviations: 7406288435.319483
[2025-04-04 18:30:02] 2025-04-04 22:29:46,422 | INFO     | sum of deviations: 51919001572.25008
[2025-04-04 18:30:02] 2025-04-04 22:29:46,422 | INFO     | mean x: 1743796967.9513888
[2025-04-04 18:30:02] 2025-04-04 22:29:46,422 | INFO     | mean y: 2313734.875
[2025-04-04 18:30:02] 2025-04-04 22:29:46,422 | INFO     | -- intersect: -12221919538.163555
[2025-04-04 18:30:02] 2025-04-04 22:29:46,422 | INFO     | intersect: -12221919538.163555
[2025-04-04 18:30:02] 2025-04-04 22:29:46,422 | INFO     | chi2: 0.6142600930022198
[2025-04-04 18:30:02] 2025-04-04 22:29:46,422 | INFO     | current chi2=0.6142600930022198 (change=44.83727161808981 %)
[2025-04-04 18:30:02] 2025-04-04 22:29:46,423 | INFO     | model: linear, x: [1743788519.0, 1743788581.0, 1743788641.0, 1743788705.0, 1743788764.0, 1743788825.0, 1743788886.0, 1743788947.0, 1743789007.0, 1743789068.0, 1743
[2025-04-04 18:30:02] 2025-04-04 22:29:46,423 | INFO     | sum of square deviations: 7027203933.787969
[2025-04-04 18:30:02] 2025-04-04 22:29:46,425 | INFO     | sum of deviations: 27918554100.296837
[2025-04-04 18:30:02] 2025-04-04 22:29:46,425 | INFO     | mean x: 1743797120.4416962
[2025-04-04 18:30:02] 2025-04-04 22:29:46,425 | INFO     | mean y: 2323380.381625442
[2025-04-04 18:30:02] 2025-04-04 22:29:46,425 | INFO     | -- intersect: -6925651772.4257555
[2025-04-04 18:30:02] 2025-04-04 22:29:46,425 | INFO     | intersect: -6925651772.4257555
[2025-04-04 18:30:02] 2025-04-04 22:29:46,426 | INFO     | chi2: 0.3529373704885149
[2025-04-04 18:30:02] 2025-04-04 22:29:46,426 | INFO     | current chi2=0.3529373704885149 (change=42.54268273175294 %)
[2025-04-04 18:30:02] 2025-04-04 22:29:46,426 | INFO     | model: linear, x: [1743788825.0, 1743788886.0, 1743788947.0, 1743789007.0, 1743789068.0, 1743789134.0, 1743789191.0, 1743789251.0, 1743789313.0, 1743789375.0, 1743
[2025-04-04 18:30:02] 2025-04-04 22:29:46,427 | INFO     | sum of square deviations: 6661281975.701432
[2025-04-04 18:30:02] 2025-04-04 22:29:46,429 | INFO     | sum of deviations: 16709013356.514397
[2025-04-04 18:30:02] 2025-04-04 22:29:46,429 | INFO     | mean x: 1743797272.9316547
[2025-04-04 18:30:02] 2025-04-04 22:29:46,429 | INFO     | mean y: 2328041.8165467624
[2025-04-04 18:30:02] 2025-04-04 22:29:46,429 | INFO     | -- intersect: -4371774725.601622
[2025-04-04 18:30:02] 2025-04-04 22:29:46,429 | INFO     | intersect: -4371774725.601622
[2025-04-04 18:30:02] 2025-04-04 22:29:46,430 | INFO     | chi2: 0.2916153235667447
[2025-04-04 18:30:02] 2025-04-04 22:29:46,430 | INFO     | current chi2=0.2916153235667447 (change=17.374767323984962 %)
[2025-04-04 18:30:02] 2025-04-04 22:29:46,430 | INFO     | left removable region: 60
[2025-04-04 18:30:02] 2025-04-04 22:29:46,430 | INFO     | model: linear, x: [1743790654.0, 1743790716.0, 1743790778.0, 1743790840.0, 1743790899.0, 1743790960.0, 1743791021.0, 1743791081.0, 1743791142.0, 1743791203.0, 1743
[2025-04-04 18:30:02] 2025-04-04 22:29:46,430 | INFO     | sum of square deviations: 4394142447.028925
[2025-04-04 18:30:02] 2025-04-04 22:29:46,432 | INFO     | sum of deviations: 33141699418.582653
[2025-04-04 18:30:02] 2025-04-04 22:29:46,432 | INFO     | mean x: 1743798004.8719008
[2025-04-04 18:30:02] 2025-04-04 22:29:46,432 | INFO     | mean y: 2321135.276859504
[2025-04-04 18:30:02] 2025-04-04 22:29:46,432 | INFO     | -- intersect: -13149830853.620245
[2025-04-04 18:30:02] 2025-04-04 22:29:46,432 | INFO     | intersect: -13149830853.620245
[2025-04-04 18:30:02] 2025-04-04 22:29:46,432 | INFO     | chi2: 0.0501681746415993
[2025-04-04 18:30:02] 2025-04-04 22:29:46,432 | INFO     | -- intersect: -13149830853.620245
[2025-04-04 18:30:02] 2025-04-04 22:29:46,433 | INFO     | current memory leak: 7.54 B/s (using 242 data points, chi2=0.05)
[2025-04-04 18:30:02] 2025-04-04 22:29:46,433 | INFO     | ..............................
[2025-04-04 18:30:02] 2025-04-04 22:29:46,433 | INFO     | . Timing measurements:
[2025-04-04 18:30:02] 2025-04-04 22:29:46,433 | INFO     | . get job = 0 s
[2025-04-04 18:30:02] 2025-04-04 22:29:46,434 | INFO     | . initial setup = 9 s
[2025-04-04 18:30:02] 2025-04-04 22:29:46,434 | INFO     | . payload setup = 47 s
[2025-04-04 18:30:02] 2025-04-04 22:29:46,434 | INFO     | . stage-in = 0 s
[2025-04-04 18:30:02] 2025-04-04 22:29:46,434 | INFO     | . payload execution = 18803 s
[2025-04-04 18:30:02] 2025-04-04 22:29:46,434 | INFO     | . stage-out = 2 s
[2025-04-04 18:30:02] 2025-04-04 22:29:46,434 | INFO     | . log creation = 0 s
[2025-04-04 18:30:02] 2025-04-04 22:29:46,434 | INFO     | ..............................
[2025-04-04 18:30:02] 2025-04-04 22:29:46,524 | INFO     | 
[2025-04-04 18:30:02] 2025-04-04 22:29:46,524 | INFO     | job summary report
[2025-04-04 18:30:02] 2025-04-04 22:29:46,524 | INFO     | --------------------------------------------------
[2025-04-04 18:30:02] 2025-04-04 22:29:46,524 | INFO     | PanDA job id: 6583707830
[2025-04-04 18:30:02] 2025-04-04 22:29:46,524 | INFO     | task id: 43634898
[2025-04-04 18:30:02] 2025-04-04 22:29:46,524 | INFO     | errors: (none)
[2025-04-04 18:30:02] 2025-04-04 22:29:46,524 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 18:30:02] 2025-04-04 22:29:46,524 | INFO     | pilot state: finished 
[2025-04-04 18:30:02] 2025-04-04 22:29:46,524 | INFO     | transexitcode: 0
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | exeerrorcode: 0
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | exeerrordiag: 
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | exitcode: 0
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | exitmsg: OK
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | cpuconsumptiontime: 69827 s
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | nevents: 400
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | neventsw: 0
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | pid: 4142914
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | pgrp: 4142914
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | corecount: 8
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | event service: False
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | sizes: {0: 2417168, 1: 2417423, 2: 2417451, 13: 2417451, 24: 2417507, 35: 2417535, 37: 2417897, 46: 2417925, 18855: 2450664, 18858: 2459605, 18859: 2459661, 18870:
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | --------------------------------------------------
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | 
[2025-04-04 18:30:02] 2025-04-04 22:29:46,525 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-04 18:30:02] 2025-04-04 22:29:46,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,547 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 18:30:02] 2025-04-04 22:29:46,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 18:30:02] 2025-04-04 22:29:46,548 | INFO     | job 6583707830 has completed (purged errors)
[2025-04-04 18:30:02] 2025-04-04 22:29:46,548 | INFO     | overall cleanup function is called
[2025-04-04 18:30:02] 2025-04-04 22:29:47,557 | INFO     | --- collectZombieJob: --- 10, [4142914]
[2025-04-04 18:30:02] 2025-04-04 22:29:47,557 | INFO     | zombie collector waiting for pid 4142914
[2025-04-04 18:30:02] 2025-04-04 22:29:47,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 18:30:02] 2025-04-04 22:29:47,557 | INFO     | collected zombie processes
[2025-04-04 18:30:02] 2025-04-04 22:29:47,557 | INFO     | will attempt to kill all subprocesses of pid=4142914
[2025-04-04 18:30:02] 2025-04-04 22:29:47,842 | INFO     | process IDs to be killed: [4142914] (in reverse order)
[2025-04-04 18:30:02] 2025-04-04 22:29:48,031 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 18:30:02] 2025-04-04 22:29:48,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 18:30:02] 2025-04-04 22:29:48,045 | INFO     | did not find any defunct processes belonging to 4142914
[2025-04-04 18:30:02] 2025-04-04 22:29:48,059 | INFO     | did not find any defunct processes belonging to 4142914
[2025-04-04 18:30:02] 2025-04-04 22:29:48,060 | INFO     | ready for new job
[2025-04-04 18:30:02] 2025-04-04 22:29:48,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 18:30:02] 2025-04-04 22:29:48,064 | INFO     | ***************************************
[2025-04-04 18:30:02] 2025-04-04 22:29:48,065 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-04 18:30:02] 2025-04-04 22:29:48,065 | INFO     | ***************************************
[2025-04-04 18:30:02] 2025-04-04 22:29:48,065 | INFO     | 
[2025-04-04 18:30:02] 2025-04-04 22:29:48,087 | INFO     | architecture information:
[2025-04-04 18:30:02] 2025-04-04 22:29:48,091 | INFO     | executing command: cat /etc/os-release
[2025-04-04 18:30:02] 2025-04-04 22:29:48,140 | INFO     | cat /etc/os-release:
[2025-04-04 18:30:02] NAME="CentOS Linux"
[2025-04-04 18:30:02] VERSION="7 (Core)"
[2025-04-04 18:30:02] ID="centos"
[2025-04-04 18:30:02] ID_LIKE="rhel fedora"
[2025-04-04 18:30:02] VERSION_ID="7"
[2025-04-04 18:30:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 18:30:02] ANSI_COLOR="0;31"
[2025-04-04 18:30:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 18:30:02] HOME_URL="https://www.centos.org/"
[2025-04-04 18:30:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 18:30:02] 
[2025-04-04 18:30:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 18:30:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 18:30:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 18:30:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 18:30:02] 
[2025-04-04 18:30:02] 2025-04-04 22:29:48,140 | INFO     | ***************************************
[2025-04-04 18:30:02] 2025-04-04 22:29:48,643 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-04 18:30:02] 2025-04-04 22:29:48,662 | INFO     | sufficient remaining disk space (73641492480 B)
[2025-04-04 18:30:02] 2025-04-04 22:29:48,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 18:30:02] 2025-04-04 22:29:48,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 18:30:02] 2025-04-04 22:29:48,663 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 18:30:02] 2025-04-04 22:29:48,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 18:30:02] 2025-04-04 22:29:48,775 | INFO     | aborting loop
[2025-04-04 18:30:02] 2025-04-04 22:29:49,015 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 18:30:02] 2025-04-04 22:29:49,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 18:30:02] 2025-04-04 22:29:49,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 18:30:02] 2025-04-04 22:29:49,146 | INFO     | all data control threads have been joined
[2025-04-04 18:30:02] 2025-04-04 22:29:49,301 | INFO     | all job control threads have been joined
[2025-04-04 18:30:02] 2025-04-04 22:29:49,670 | INFO     | [job] retrieve thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:49,781 | INFO     | [job] job monitor thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:49,783 | INFO     | all payload control threads have been joined
[2025-04-04 18:30:02] 2025-04-04 22:29:49,901 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:50,000 | INFO     | [job] validate thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:50,006 | INFO     | [payload] failed_post thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:50,026 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:50,152 | INFO     | [data] control thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:50,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:50,306 | INFO     | [job] control thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:50,497 | INFO     | [payload] validate_post thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:50,659 | INFO     | [data] copytool_in thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:50,676 | INFO     | [data] copytool_out thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:50,741 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:50,791 | INFO     | [payload] control thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:51,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 18:30:02] 2025-04-04 22:29:51,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 18:30:02] 2025-04-04 22:29:52,545 | INFO     | [job] queue monitor thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:55,270 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 18:30:02] 2025-04-04 22:29:57,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140576230192960)>', '<ExcThread(monitor, started 140575001007872)>']
[2025-04-04 18:30:02] 2025-04-04 22:29:58,064 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 18:30:02] 2025-04-04 22:29:58,064 | INFO     | [monitor] control thread has ended
[2025-04-04 18:30:02] 2025-04-04 22:30:02,339 | INFO     | all workflow threads have been joined
[2025-04-04 18:30:02] 2025-04-04 22:30:02,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 18:30:02] 2025-04-04 22:30:02,339 | INFO     | traces error code: 0
[2025-04-04 18:30:02] 2025-04-04 22:30:02,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 18:30:02] 2025-04-04 22:30:02,576 [wrapper] ==== pilot stdout END ====
[2025-04-04 18:30:02] 2025-04-04 22:30:02,584 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 18:30:02] 2025-04-04 22:30:02,592 [wrapper] pilotpid: 4123589
[2025-04-04 18:30:02] 2025-04-04 22:30:02,603 [wrapper] Pilot exit status: 0
[2025-04-04 18:30:02] 2025-04-04 22:30:02,644 [wrapper] pandaids: 6583707830
[2025-04-04 18:30:02] 2025-04-04 22:30:02,729 [wrapper] cleanup supervisor_pilot 2117720 4123590
[2025-04-04 18:30:02] 2025-04-04 22:30:02,731 [wrapper] Test setup, not cleaning
[2025-04-04 18:30:02] 2025-04-04 22:30:02,733 [wrapper] apfmon messages muted
[2025-04-04 18:30:02] 2025-04-04 22:30:02,736 [wrapper] ==== wrapper stdout END ====
[2025-04-04 18:30:02] 2025-04-04 22:30:02,739 [wrapper] ==== wrapper stderr END ====
[2025-04-04 18:30:02]  *** Error codes and diagnostics ***
[2025-04-04 18:30:02]     "exeErrorCode": 0,
[2025-04-04 18:30:02]     "exeErrorDiag": "",
[2025-04-04 18:30:02]     "pilotErrorCode": 0,
[2025-04-04 18:30:02]     "pilotErrorDiag": "",
[2025-04-04 18:30:02]  *** Listing of results directory ***
[2025-04-04 18:30:03] total 670788
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas    494584 Apr  1 19:44 pilot3.tar.gz
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas      5112 Apr  1 20:03 queuedata.json
[2025-04-04 18:30:03] -rwx------. 1 boincer umatlas     37140 Apr  1 20:04 runpilot2-wrapper.sh
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas       100 Apr  4 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 18:30:03] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 13:12 run_atlas
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas       105 Apr  4 13:12 job.xml
[2025-04-04 18:30:03] -rw-r--r--. 2 boincer umatlas 358241691 Apr  4 13:12 EVNT.43634896._000211.pool.root.1
[2025-04-04 18:30:03] -rw-r--r--. 2 boincer umatlas    507251 Apr  4 13:12 input.tar.gz
[2025-04-04 18:30:03] -rw-r--r--. 2 boincer umatlas     17571 Apr  4 13:12 start_atlas.sh
[2025-04-04 18:30:03] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 13:12 shared
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas         0 Apr  4 13:12 boinc_lockfile
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas      2597 Apr  4 13:12 pandaJob.out
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas       467 Apr  4 13:12 setup.sh.local
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas    979669 Apr  4 13:13 agis_schedconf.cvmfs.json
[2025-04-04 18:30:03] drwx------. 4 boincer umatlas      4096 Apr  4 13:14 pilot3
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas      6871 Apr  4 18:28 init_data.xml
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas 319973732 Apr  4 18:28 HITS.43634898._009299.pool.root.1
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas       532 Apr  4 18:28 boinc_task_state.xml
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas      1049 Apr  4 18:29 memory_monitor_summary.json
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas   1603525 Apr  4 18:29 agis_ddmendpoints.agis.ALL.json
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas    453217 Apr  4 18:29 log.43634898._009299.job.log.tgz.1
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas        95 Apr  4 18:29 pilot_heartbeat.json
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas      7738 Apr  4 18:29 heartbeat.json
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 18:29 boinc_mmap_file
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas        28 Apr  4 18:29 wrapper_checkpoint.txt
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas      4219 Apr  4 18:30 pilotlog.txt
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas   1969145 Apr  4 18:30 log.43634898._009299.job.log.1
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas       357 Apr  4 18:30 output.list
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas       620 Apr  4 18:30 runtime_log
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas   2437120 Apr  4 18:30 result.tar.gz
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas       660 Apr  4 18:30 ryHODmkl0J7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm6gELDmyiRgQm.diag
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas     11420 Apr  4 18:30 runtime_log.err
[2025-04-04 18:30:03] -rw-r--r--. 1 boincer umatlas     21665 Apr  4 18:30 stderr.txt
[2025-04-04 18:30:03] HITS file was successfully produced:
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas 319973732 Apr  4 18:28 shared/HITS.pool.root.1
[2025-04-04 18:30:03]  *** Contents of shared directory: ***
[2025-04-04 18:30:03] total 665228
[2025-04-04 18:30:03] -rw-r--r--. 2 boincer umatlas 358241691 Apr  4 13:12 ATLAS.root_0
[2025-04-04 18:30:03] -rw-r--r--. 2 boincer umatlas    507251 Apr  4 13:12 input.tar.gz
[2025-04-04 18:30:03] -rw-r--r--. 2 boincer umatlas     17571 Apr  4 13:12 start_atlas.sh
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas 319973732 Apr  4 18:28 HITS.pool.root.1
[2025-04-04 18:30:03] -rw-------. 1 boincer umatlas   2437120 Apr  4 18:30 result.tar.gz
18:30:04 (4118714): run_atlas exited; CPU time 69858.830867
18:30:04 (4118714): called boinc_finish(0)

</stderr_txt>
]]>

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