Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:50:27 (2338071): wrapper (7.7.26015): starting
10:50:27 (2338071): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 10:50:27] Arguments: --nthreads 8
[2025-04-04 10:50:27] Threads: 8
[2025-04-04 10:50:27] Checking for CVMFS
[2025-04-04 10:50:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 10:50:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 10:50:28] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 10:50:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 10:50:30] 2.12.6.0 2303914 12163 310088 144492 1 60 21034318 32935936 26742 130560 0 20460396 99.664 17988119 22757 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 10:50:30] CVMFS is ok
[2025-04-04 10:50:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 10:50:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 10:50:30] Further information can be found at the LHC@home message board.
[2025-04-04 10:50:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 10:50:30] Checking for apptainer binary...
[2025-04-04 10:50:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 10:50:30] Running /usr/bin/apptainer --version
[2025-04-04 10:50:30] apptainer version 1.4.0-1.el9
[2025-04-04 10:50:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 10:50:31] c6-2-11-1.aglt2.org
[2025-04-04 10:50:31] apptainer works
[2025-04-04 10:50:31] Set ATHENA_PROC_NUMBER=8
[2025-04-04 10:50:31] Set ATHENA_CORE_NUMBER=8
[2025-04-04 10:50:31] Starting ATLAS job with PandaID=6582474743
[2025-04-04 10:50:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 16:29:11]  *** The last 200 lines of the pilot log: ***
[2025-04-04 16:29:11] 2025-04-04 20:28:55,097 | INFO     | -- intersect: -39209368374.22679
[2025-04-04 16:29:11] 2025-04-04 20:28:55,098 | INFO     | intersect: -39209368374.22679
[2025-04-04 16:29:11] 2025-04-04 20:28:55,098 | INFO     | chi2: 4.925595806569983
[2025-04-04 16:29:11] 2025-04-04 20:28:55,098 | INFO     | current chi2=4.925595806569983 (change=11.91306659609741 %)
[2025-04-04 16:29:11] 2025-04-04 20:28:55,098 | INFO     | right removable region: 324
[2025-04-04 16:29:11] 2025-04-04 20:28:55,099 | INFO     | model: linear, x: [1743778753.0, 1743778814.0, 1743778875.0, 1743778936.0, 1743778997.0, 1743779060.0, 1743779119.0, 1743779181.0, 1743779241.0, 1743779302.0, 1743
[2025-04-04 16:29:11] 2025-04-04 20:28:55,099 | INFO     | sum of square deviations: 10644435520.04916
[2025-04-04 16:29:11] 2025-04-04 20:28:55,101 | INFO     | sum of deviations: 136032052714.89221
[2025-04-04 16:29:11] 2025-04-04 20:28:55,102 | INFO     | mean x: 1743788635.2215385
[2025-04-04 16:29:11] 2025-04-04 20:28:55,102 | INFO     | mean y: 2425303.0153846154
[2025-04-04 16:29:11] 2025-04-04 20:28:55,102 | INFO     | -- intersect: -22282565488.96141
[2025-04-04 16:29:11] 2025-04-04 20:28:55,102 | INFO     | intersect: -22282565488.96141
[2025-04-04 16:29:11] 2025-04-04 20:28:55,103 | INFO     | chi2: 2.7662718668430477
[2025-04-04 16:29:11] 2025-04-04 20:28:55,103 | INFO     | current chi2=2.7662718668430477 (change=50.52935415718205 %)
[2025-04-04 16:29:11] 2025-04-04 20:28:55,103 | INFO     | model: linear, x: [1743779060.0, 1743779119.0, 1743779181.0, 1743779241.0, 1743779302.0, 1743779363.0, 1743779425.0, 1743779485.0, 1743779546.0, 1743779607.0, 1743
[2025-04-04 16:29:11] 2025-04-04 20:28:55,103 | INFO     | sum of square deviations: 10160646349.800072
[2025-04-04 16:29:11] 2025-04-04 20:28:55,106 | INFO     | sum of deviations: 80808257071.27502
[2025-04-04 16:29:11] 2025-04-04 20:28:55,106 | INFO     | mean x: 1743788787.725
[2025-04-04 16:29:11] 2025-04-04 20:28:55,106 | INFO     | mean y: 2442702.253125
[2025-04-04 16:29:11] 2025-04-04 20:28:55,106 | INFO     | -- intersect: -13866018789.791773
[2025-04-04 16:29:11] 2025-04-04 20:28:55,106 | INFO     | intersect: -13866018789.791773
[2025-04-04 16:29:11] 2025-04-04 20:28:55,107 | INFO     | chi2: 1.7490658540668373
[2025-04-04 16:29:11] 2025-04-04 20:28:55,107 | INFO     | current chi2=1.7490658540668373 (change=36.771729668677736 %)
[2025-04-04 16:29:11] 2025-04-04 20:28:55,107 | INFO     | model: linear, x: [1743779363.0, 1743779425.0, 1743779485.0, 1743779546.0, 1743779607.0, 1743779668.0, 1743779729.0, 1743779790.0, 1743779851.0, 1743779913.0, 1743
[2025-04-04 16:29:11] 2025-04-04 20:28:55,108 | INFO     | sum of square deviations: 9691800223.885788
[2025-04-04 16:29:11] 2025-04-04 20:28:55,110 | INFO     | sum of deviations: 30806525731.24762
[2025-04-04 16:29:11] 2025-04-04 20:28:55,111 | INFO     | mean x: 1743788940.2190475
[2025-04-04 16:29:11] 2025-04-04 20:28:55,111 | INFO     | mean y: 2458962.6920634923
[2025-04-04 16:29:11] 2025-04-04 20:28:55,111 | INFO     | -- intersect: -5540379066.957789
[2025-04-04 16:29:11] 2025-04-04 20:28:55,111 | INFO     | intersect: -5540379066.957789
[2025-04-04 16:29:11] 2025-04-04 20:28:55,112 | INFO     | chi2: 0.9027902735442208
[2025-04-04 16:29:11] 2025-04-04 20:28:55,112 | INFO     | current chi2=0.9027902735442208 (change=48.38443209870574 %)
[2025-04-04 16:29:11] 2025-04-04 20:28:55,113 | INFO     | model: linear, x: [1743779668.0, 1743779729.0, 1743779790.0, 1743779851.0, 1743779913.0, 1743779974.0, 1743780034.0, 1743780095.0, 1743780157.0, 1743780217.0, 1743
[2025-04-04 16:29:11] 2025-04-04 20:28:55,113 | INFO     | sum of square deviations: 9237566742.583885
[2025-04-04 16:29:11] 2025-04-04 20:28:55,116 | INFO     | sum of deviations: 15939091847.829033
[2025-04-04 16:29:11] 2025-04-04 20:28:55,116 | INFO     | mean x: 1743789092.7193549
[2025-04-04 16:29:11] 2025-04-04 20:28:55,116 | INFO     | mean y: 2463933.7451612903
[2025-04-04 16:29:11] 2025-04-04 20:28:55,116 | INFO     | -- intersect: -3006381932.9881105
[2025-04-04 16:29:11] 2025-04-04 20:28:55,116 | INFO     | intersect: -3006381932.9881105
[2025-04-04 16:29:11] 2025-04-04 20:28:55,116 | INFO     | chi2: 0.8185340965172081
[2025-04-04 16:29:11] 2025-04-04 20:28:55,117 | INFO     | current chi2=0.8185340965172081 (change=9.332862736351318 %)
[2025-04-04 16:29:11] 2025-04-04 20:28:55,117 | INFO     | left removable region: 40
[2025-04-04 16:29:11] 2025-04-04 20:28:55,117 | INFO     | model: linear, x: [1743780888.0, 1743780949.0, 1743781010.0, 1743781071.0, 1743781133.0, 1743781193.0, 1743781254.0, 1743781315.0, 1743781377.0, 1743781437.0, 1743
[2025-04-04 16:29:11] 2025-04-04 20:28:55,117 | INFO     | sum of square deviations: 7102779903.024625
[2025-04-04 16:29:11] 2025-04-04 20:28:55,119 | INFO     | sum of deviations: 22879089667.440144
[2025-04-04 16:29:11] 2025-04-04 20:28:55,120 | INFO     | mean x: 1743789519.721831
[2025-04-04 16:29:11] 2025-04-04 20:28:55,120 | INFO     | mean y: 2474284.4612676054
[2025-04-04 16:29:11] 2025-04-04 20:28:55,120 | INFO     | -- intersect: -5614526006.631638
[2025-04-04 16:29:11] 2025-04-04 20:28:55,120 | INFO     | intersect: -5614526006.631638
[2025-04-04 16:29:11] 2025-04-04 20:28:55,120 | INFO     | chi2: 0.04223349380439696
[2025-04-04 16:29:11] 2025-04-04 20:28:55,121 | INFO     | -- intersect: -5614526006.631638
[2025-04-04 16:29:11] 2025-04-04 20:28:55,121 | INFO     | current memory leak: 3.22 B/s (using 284 data points, chi2=0.04)
[2025-04-04 16:29:11] 2025-04-04 20:28:55,122 | INFO     | ..............................
[2025-04-04 16:29:11] 2025-04-04 20:28:55,122 | INFO     | . Timing measurements:
[2025-04-04 16:29:11] 2025-04-04 20:28:55,122 | INFO     | . get job = 0 s
[2025-04-04 16:29:11] 2025-04-04 20:28:55,122 | INFO     | . initial setup = 9 s
[2025-04-04 16:29:11] 2025-04-04 20:28:55,122 | INFO     | . payload setup = 44 s
[2025-04-04 16:29:11] 2025-04-04 20:28:55,122 | INFO     | . stage-in = 0 s
[2025-04-04 16:29:11] 2025-04-04 20:28:55,122 | INFO     | . payload execution = 20106 s
[2025-04-04 16:29:11] 2025-04-04 20:28:55,122 | INFO     | . stage-out = 2 s
[2025-04-04 16:29:11] 2025-04-04 20:28:55,122 | INFO     | . log creation = 0 s
[2025-04-04 16:29:11] 2025-04-04 20:28:55,122 | INFO     | ..............................
[2025-04-04 16:29:11] 2025-04-04 20:28:55,227 | INFO     | 
[2025-04-04 16:29:11] 2025-04-04 20:28:55,227 | INFO     | job summary report
[2025-04-04 16:29:11] 2025-04-04 20:28:55,227 | INFO     | --------------------------------------------------
[2025-04-04 16:29:11] 2025-04-04 20:28:55,227 | INFO     | PanDA job id: 6582474743
[2025-04-04 16:29:11] 2025-04-04 20:28:55,227 | INFO     | task id: 43634898
[2025-04-04 16:29:11] 2025-04-04 20:28:55,227 | INFO     | errors: (none)
[2025-04-04 16:29:11] 2025-04-04 20:28:55,227 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | pilot state: finished 
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | transexitcode: 0
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | exeerrorcode: 0
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | exeerrordiag: 
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | exitcode: 0
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | exitmsg: OK
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | cpuconsumptiontime: 83351 s
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | nevents: 400
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | neventsw: 0
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | pid: 2364917
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | pgrp: 2364917
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | corecount: 8
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | event service: False
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | sizes: {0: 2417222, 1: 2417222, 2: 2417222, 3: 2417449, 14: 2417449, 25: 2417477, 33: 2417839, 36: 2417895, 20154: 2451008, 20155: 2451007, 20157: 2460340, 20162: 
[2025-04-04 16:29:11] 2025-04-04 20:28:55,228 | INFO     | --------------------------------------------------
[2025-04-04 16:29:11] 2025-04-04 20:28:55,229 | INFO     | 
[2025-04-04 16:29:11] 2025-04-04 20:28:55,229 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-04 16:29:11] 2025-04-04 20:28:55,254 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,254 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,254 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 16:29:11] 2025-04-04 20:28:55,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,256 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 16:29:11] 2025-04-04 20:28:55,256 | INFO     | job 6582474743 has completed (purged errors)
[2025-04-04 16:29:11] 2025-04-04 20:28:55,256 | INFO     | overall cleanup function is called
[2025-04-04 16:29:11] 2025-04-04 20:28:55,298 | WARNING  | process 2364917 can no longer be monitored (due to stat problems) - aborting
[2025-04-04 16:29:11] 2025-04-04 20:28:55,604 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 16:29:11] 2025-04-04 20:28:55,770 | INFO     | number of running child processes to parent process 2364917: 1
[2025-04-04 16:29:11] 2025-04-04 20:28:55,771 | INFO     | maximum number of monitored processes: 6
[2025-04-04 16:29:11] 2025-04-04 20:28:55,771 | INFO     | aborting job monitoring since job object (job id=6582474743) has expired
[2025-04-04 16:29:11] 2025-04-04 20:28:56,264 | INFO     | --- collectZombieJob: --- 10, [2364917]
[2025-04-04 16:29:11] 2025-04-04 20:28:56,264 | INFO     | zombie collector waiting for pid 2364917
[2025-04-04 16:29:11] 2025-04-04 20:28:56,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 16:29:11] 2025-04-04 20:28:56,265 | INFO     | collected zombie processes
[2025-04-04 16:29:11] 2025-04-04 20:28:56,265 | INFO     | will attempt to kill all subprocesses of pid=2364917
[2025-04-04 16:29:11] 2025-04-04 20:28:56,491 | INFO     | process IDs to be killed: [2364917] (in reverse order)
[2025-04-04 16:29:11] 2025-04-04 20:28:56,639 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 16:29:11] 2025-04-04 20:28:56,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 16:29:11] 2025-04-04 20:28:56,688 | INFO     | did not find any defunct processes belonging to 2364917
[2025-04-04 16:29:11] 2025-04-04 20:28:56,747 | INFO     | did not find any defunct processes belonging to 2364917
[2025-04-04 16:29:11] 2025-04-04 20:28:56,748 | INFO     | ready for new job
[2025-04-04 16:29:11] 2025-04-04 20:28:56,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 16:29:11] 2025-04-04 20:28:56,750 | INFO     | ***************************************
[2025-04-04 16:29:11] 2025-04-04 20:28:56,750 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-04 16:29:11] 2025-04-04 20:28:56,751 | INFO     | ***************************************
[2025-04-04 16:29:11] 2025-04-04 20:28:56,751 | INFO     | 
[2025-04-04 16:29:11] 2025-04-04 20:28:56,763 | INFO     | architecture information:
[2025-04-04 16:29:11] 2025-04-04 20:28:56,764 | INFO     | executing command: cat /etc/os-release
[2025-04-04 16:29:11] 2025-04-04 20:28:56,781 | INFO     | cat /etc/os-release:
[2025-04-04 16:29:11] NAME="CentOS Linux"
[2025-04-04 16:29:11] VERSION="7 (Core)"
[2025-04-04 16:29:11] ID="centos"
[2025-04-04 16:29:11] ID_LIKE="rhel fedora"
[2025-04-04 16:29:11] VERSION_ID="7"
[2025-04-04 16:29:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 16:29:11] ANSI_COLOR="0;31"
[2025-04-04 16:29:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 16:29:11] HOME_URL="https://www.centos.org/"
[2025-04-04 16:29:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 16:29:11] 
[2025-04-04 16:29:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 16:29:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 16:29:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 16:29:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 16:29:11] 
[2025-04-04 16:29:11] 2025-04-04 20:28:56,781 | INFO     | ***************************************
[2025-04-04 16:29:11] 2025-04-04 20:28:56,804 | INFO     | PID=2349457 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-04 16:29:11] 2025-04-04 20:28:56,804 | INFO     | .. there are 22 such processes running
[2025-04-04 16:29:11] 2025-04-04 20:28:57,284 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-04 16:29:11] 2025-04-04 20:28:57,308 | INFO     | sufficient remaining disk space (96115621888 B)
[2025-04-04 16:29:11] 2025-04-04 20:28:57,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 16:29:11] 2025-04-04 20:28:57,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 16:29:11] 2025-04-04 20:28:57,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 16:29:11] 2025-04-04 20:28:57,309 | INFO     | aborting loop
[2025-04-04 16:29:11] 2025-04-04 20:28:57,309 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 16:29:11] 2025-04-04 20:28:57,309 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 16:29:11] 2025-04-04 20:28:57,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 16:29:11] 2025-04-04 20:28:57,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 16:29:11] 2025-04-04 20:28:57,327 | INFO     | all data control threads have been joined
[2025-04-04 16:29:11] 2025-04-04 20:28:57,655 | INFO     | all payload control threads have been joined
[2025-04-04 16:29:11] 2025-04-04 20:28:58,085 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 16:29:11] 2025-04-04 20:28:58,096 | INFO     | all job control threads have been joined
[2025-04-04 16:29:11] 2025-04-04 20:28:58,313 | INFO     | [job] retrieve thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:58,314 | INFO     | [job] job monitor thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:58,333 | INFO     | [data] control thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:58,469 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:58,511 | INFO     | [payload] failed_post thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:58,661 | INFO     | [payload] control thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:58,790 | INFO     | [job] validate thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:58,902 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:59,101 | INFO     | [job] control thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:59,403 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:59,572 | INFO     | [data] copytool_in thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:59,658 | INFO     | [payload] validate_post thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:28:59,756 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:29:00,091 | INFO     | [data] copytool_out thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:29:00,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 16:29:11] 2025-04-04 20:29:00,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 16:29:11] 2025-04-04 20:29:01,242 | INFO     | [job] queue monitor thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:29:04,712 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 16:29:11] 2025-04-04 20:29:06,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140158779025216)>', '<ExcThread(monitor, started 140158062028544)>']
[2025-04-04 16:29:11] 2025-04-04 20:29:07,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 16:29:11] 2025-04-04 20:29:07,359 | INFO     | [monitor] control thread has ended
[2025-04-04 16:29:11] 2025-04-04 20:29:11,482 | INFO     | all workflow threads have been joined
[2025-04-04 16:29:11] 2025-04-04 20:29:11,483 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 16:29:11] 2025-04-04 20:29:11,483 | INFO     | traces error code: 0
[2025-04-04 16:29:11] 2025-04-04 20:29:11,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 16:29:11] 2025-04-04 20:29:11,712 [wrapper] ==== pilot stdout END ====
[2025-04-04 16:29:11] 2025-04-04 20:29:11,714 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 16:29:11] 2025-04-04 20:29:11,717 [wrapper] pilotpid: 2349457
[2025-04-04 16:29:11] 2025-04-04 20:29:11,720 [wrapper] Pilot exit status: 0
[2025-04-04 16:29:11] 2025-04-04 20:29:11,729 [wrapper] pandaids: 6582474743
[2025-04-04 16:29:11] 2025-04-04 20:29:11,806 [wrapper] cleanup supervisor_pilot  285378 2349459
[2025-04-04 16:29:11] 2025-04-04 20:29:11,809 [wrapper] Test setup, not cleaning
[2025-04-04 16:29:11] 2025-04-04 20:29:11,812 [wrapper] apfmon messages muted
[2025-04-04 16:29:11] 2025-04-04 20:29:11,816 [wrapper] ==== wrapper stdout END ====
[2025-04-04 16:29:11] 2025-04-04 20:29:11,818 [wrapper] ==== wrapper stderr END ====
[2025-04-04 16:29:11]  *** Error codes and diagnostics ***
[2025-04-04 16:29:11]     "exeErrorCode": 0,
[2025-04-04 16:29:11]     "exeErrorDiag": "",
[2025-04-04 16:29:11]     "pilotErrorCode": 0,
[2025-04-04 16:29:11]     "pilotErrorDiag": "",
[2025-04-04 16:29:11]  *** Listing of results directory ***
[2025-04-04 16:29:11] total 678212
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas    494584 Apr  1 07:43 pilot3.tar.gz
[2025-04-04 16:29:11] -rwx------. 1 boincer umatlas     37140 Apr  1 08:13 runpilot2-wrapper.sh
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas      5112 Apr  1 08:13 queuedata.json
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas       100 Apr  4 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 16:29:11] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 10:50 run_atlas
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas       105 Apr  4 10:50 job.xml
[2025-04-04 16:29:11] -rw-r--r--. 2 boincer umatlas 357814287 Apr  4 10:50 EVNT.43634896._000471.pool.root.1
[2025-04-04 16:29:11] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 10:50 shared
[2025-04-04 16:29:11] -rw-r--r--. 2 boincer umatlas    507245 Apr  4 10:50 input.tar.gz
[2025-04-04 16:29:11] -rw-r--r--. 2 boincer umatlas     17571 Apr  4 10:50 start_atlas.sh
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas         0 Apr  4 10:50 boinc_lockfile
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas      2595 Apr  4 10:50 pandaJob.out
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas       467 Apr  4 10:50 setup.sh.local
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas    979639 Apr  4 10:51 agis_schedconf.cvmfs.json
[2025-04-04 16:29:11] drwx------. 4 boincer umatlas      4096 Apr  4 10:51 pilot3
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas      6857 Apr  4 16:27 init_data.xml
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas 327435954 Apr  4 16:27 HITS.43634898._004460.pool.root.1
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas       532 Apr  4 16:27 boinc_task_state.xml
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas        95 Apr  4 16:28 pilot_heartbeat.json
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas      1054 Apr  4 16:28 memory_monitor_summary.json
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 16:28 boinc_mmap_file
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas        28 Apr  4 16:28 wrapper_checkpoint.txt
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas   1603525 Apr  4 16:28 agis_ddmendpoints.agis.ALL.json
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas    486417 Apr  4 16:28 log.43634898._004460.job.log.tgz.1
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas      7740 Apr  4 16:28 heartbeat.json
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas      4738 Apr  4 16:29 pilotlog.txt
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas   2213102 Apr  4 16:29 log.43634898._004460.job.log.1
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas       357 Apr  4 16:29 output.list
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas       620 Apr  4 16:29 runtime_log
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas   2723840 Apr  4 16:29 result.tar.gz
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas     11425 Apr  4 16:29 runtime_log.err
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas       659 Apr  4 16:29 1PtNDmlfpJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm47qKDmCXvnPm.diag
[2025-04-04 16:29:11] -rw-r--r--. 1 boincer umatlas     21871 Apr  4 16:29 stderr.txt
[2025-04-04 16:29:11] HITS file was successfully produced:
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas 327435954 Apr  4 16:27 shared/HITS.pool.root.1
[2025-04-04 16:29:11]  *** Contents of shared directory: ***
[2025-04-04 16:29:11] total 672380
[2025-04-04 16:29:11] -rw-r--r--. 2 boincer umatlas 357814287 Apr  4 10:50 ATLAS.root_0
[2025-04-04 16:29:11] -rw-r--r--. 2 boincer umatlas    507245 Apr  4 10:50 input.tar.gz
[2025-04-04 16:29:11] -rw-r--r--. 2 boincer umatlas     17571 Apr  4 10:50 start_atlas.sh
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas 327435954 Apr  4 16:27 HITS.pool.root.1
[2025-04-04 16:29:11] -rw-------. 1 boincer umatlas   2723840 Apr  4 16:29 result.tar.gz
16:29:13 (2338071): run_atlas exited; CPU time 83332.305398
16:29:13 (2338071): called boinc_finish(0)

</stderr_txt>
]]>

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