Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:51:44 (1557464): wrapper (7.7.26015): starting
09:51:44 (1557464): wrapper: running run_atlas (--nthreads 9)
[2025-04-04 09:51:44] Arguments: --nthreads 9
[2025-04-04 09:51:44] Threads: 9
[2025-04-04 09:51:44] Checking for CVMFS
[2025-04-04 09:51:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 09:51:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 09:51:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 09:51:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 09:51:45] 2.12.6.0 3556684 113483 431204 144490 1 270 30375143 40960000 15219 130560 0 29749027 99.715 22376952 21200 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 09:51:45] CVMFS is ok
[2025-04-04 09:51:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 09:51:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 09:51:45] Further information can be found at the LHC@home message board.
[2025-04-04 09:51:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 09:51:45] Checking for apptainer binary...
[2025-04-04 09:51:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 09:51:45] Running /usr/bin/apptainer --version
[2025-04-04 09:51:45] apptainer version 1.4.0-1.el9
[2025-04-04 09:51:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 09:51:46] c6-8-12-4.aglt2.org
[2025-04-04 09:51:46] apptainer works
[2025-04-04 09:51:46] Set ATHENA_PROC_NUMBER=9
[2025-04-04 09:51:46] Set ATHENA_CORE_NUMBER=9
[2025-04-04 09:52:06] Starting ATLAS job with PandaID=6586398212
[2025-04-04 09:52:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 20:40:21]  *** The last 200 lines of the pilot log: ***
[2025-04-04 20:40:21] 2025-04-05 00:40:01,452 | INFO     | sum of deviations: 902111508813.0201
[2025-04-04 20:40:21] 2025-04-05 00:40:01,453 | INFO     | mean x: 1743794116.8744037
[2025-04-04 20:40:21] 2025-04-05 00:40:01,453 | INFO     | mean y: 2534122.0508744037
[2025-04-04 20:40:21] 2025-04-05 00:40:01,453 | INFO     | -- intersect: -20383959624.575146
[2025-04-04 20:40:21] 2025-04-05 00:40:01,453 | INFO     | intersect: -20383959624.575146
[2025-04-04 20:40:21] 2025-04-05 00:40:01,454 | INFO     | chi2: 8.944731132445764
[2025-04-04 20:40:21] 2025-04-05 00:40:01,454 | INFO     | current chi2=8.944731132445764 (change=13.325123804535592 %)
[2025-04-04 20:40:21] 2025-04-05 00:40:01,472 | INFO     | right removable region: 628
[2025-04-04 20:40:21] 2025-04-05 00:40:01,473 | INFO     | sum of square deviations: 77163337733.07793
[2025-04-04 20:40:21] 2025-04-05 00:40:01,484 | INFO     | sum of deviations: 621143761377.2562
[2025-04-04 20:40:21] 2025-04-05 00:40:01,484 | INFO     | mean x: 1743794421.8744037
[2025-04-04 20:40:21] 2025-04-05 00:40:01,484 | INFO     | mean y: 2544602.015898251
[2025-04-04 20:40:21] 2025-04-05 00:40:01,484 | INFO     | -- intersect: -14034523493.95668
[2025-04-04 20:40:21] 2025-04-05 00:40:01,485 | INFO     | intersect: -14034523493.95668
[2025-04-04 20:40:21] 2025-04-05 00:40:01,495 | INFO     | chi2: 6.624003211959283
[2025-04-04 20:40:21] 2025-04-05 00:40:01,496 | INFO     | current chi2=6.624003211959283 (change=35.81308931329013 %)
[2025-04-04 20:40:21] 2025-04-05 00:40:01,497 | INFO     | sum of square deviations: 75337535749.22427
[2025-04-04 20:40:21] 2025-04-05 00:40:01,545 | INFO     | sum of deviations: 468097974779.03564
[2025-04-04 20:40:21] 2025-04-05 00:40:01,545 | INFO     | mean x: 1743794574.3814104
[2025-04-04 20:40:21] 2025-04-05 00:40:01,545 | INFO     | mean y: 2557383.7099358975
[2025-04-04 20:40:21] 2025-04-05 00:40:01,545 | INFO     | -- intersect: -10832236993.102602
[2025-04-04 20:40:21] 2025-04-05 00:40:01,545 | INFO     | intersect: -10832236993.102602
[2025-04-04 20:40:21] 2025-04-05 00:40:01,546 | INFO     | chi2: 4.677105972751387
[2025-04-04 20:40:21] 2025-04-05 00:40:01,546 | INFO     | current chi2=4.677105972751387 (change=29.39155034968699 %)
[2025-04-04 20:40:21] 2025-04-05 00:40:01,547 | INFO     | sum of square deviations: 73540757565.30841
[2025-04-04 20:40:21] 2025-04-05 00:40:01,588 | INFO     | sum of deviations: 337075994529.4611
[2025-04-04 20:40:21] 2025-04-05 00:40:01,589 | INFO     | mean x: 1743794726.8885298
[2025-04-04 20:40:21] 2025-04-05 00:40:01,589 | INFO     | mean y: 2568504.5718901455
[2025-04-04 20:40:21] 2025-04-05 00:40:01,589 | INFO     | -- intersect: -7990160443.035004
[2025-04-04 20:40:21] 2025-04-05 00:40:01,589 | INFO     | intersect: -7990160443.035004
[2025-04-04 20:40:21] 2025-04-05 00:40:01,590 | INFO     | chi2: 3.278307117038689
[2025-04-04 20:40:21] 2025-04-05 00:40:01,590 | INFO     | current chi2=3.278307117038689 (change=29.9073586072678 %)
[2025-04-04 20:40:21] 2025-04-05 00:40:01,591 | INFO     | sum of square deviations: 71772770618.82892
[2025-04-04 20:40:21] 2025-04-05 00:40:01,655 | INFO     | sum of deviations: 221793061874.83414
[2025-04-04 20:40:21] 2025-04-05 00:40:01,655 | INFO     | mean x: 1743794879.3957655
[2025-04-04 20:40:21] 2025-04-05 00:40:01,655 | INFO     | mean y: 2578442.013029316
[2025-04-04 20:40:21] 2025-04-05 00:40:01,656 | INFO     | -- intersect: -5386117051.39155
[2025-04-04 20:40:21] 2025-04-05 00:40:01,656 | INFO     | intersect: -5386117051.39155
[2025-04-04 20:40:21] 2025-04-05 00:40:01,682 | INFO     | chi2: 2.1594183897103187
[2025-04-04 20:40:21] 2025-04-05 00:40:01,682 | INFO     | current chi2=2.1594183897103187 (change=34.130076511534035 %)
[2025-04-04 20:40:21] 2025-04-05 00:40:01,683 | INFO     | sum of square deviations: 70033455077.68776
[2025-04-04 20:40:21] 2025-04-05 00:40:01,776 | INFO     | sum of deviations: 159408501614.17126
[2025-04-04 20:40:21] 2025-04-05 00:40:01,783 | INFO     | mean x: 1743795031.8981938
[2025-04-04 20:40:21] 2025-04-05 00:40:01,783 | INFO     | mean y: 2583910.5188834155
[2025-04-04 20:40:21] 2025-04-05 00:40:01,783 | INFO     | -- intersect: -3966601286.024254
[2025-04-04 20:40:21] 2025-04-05 00:40:01,783 | INFO     | intersect: -3966601286.024254
[2025-04-04 20:40:21] 2025-04-05 00:40:01,784 | INFO     | chi2: 1.8617924888571034
[2025-04-04 20:40:21] 2025-04-05 00:40:01,784 | INFO     | current chi2=1.8617924888571034 (change=13.782688073390966 %)
[2025-04-04 20:40:21] 2025-04-05 00:40:01,784 | INFO     | left removable region: 50
[2025-04-04 20:40:21] 2025-04-05 00:40:01,785 | INFO     | sum of square deviations: 59873227924.67823
[2025-04-04 20:40:21] 2025-04-05 00:40:01,884 | INFO     | sum of deviations: 82214890294.25948
[2025-04-04 20:40:21] 2025-04-05 00:40:01,884 | INFO     | mean x: 1743795611.4186852
[2025-04-04 20:40:21] 2025-04-05 00:40:01,884 | INFO     | mean y: 2605482.920415225
[2025-04-04 20:40:21] 2025-04-05 00:40:01,885 | INFO     | -- intersect: -2391886510.5421
[2025-04-04 20:40:21] 2025-04-05 00:40:01,885 | INFO     | intersect: -2391886510.5421
[2025-04-04 20:40:21] 2025-04-05 00:40:01,885 | INFO     | chi2: 0.020051507918947168
[2025-04-04 20:40:21] 2025-04-05 00:40:01,886 | INFO     | -- intersect: -2391886510.5421
[2025-04-04 20:40:21] 2025-04-05 00:40:01,886 | INFO     | current memory leak: 1.37 B/s (using 578 data points, chi2=0.02)
[2025-04-04 20:40:21] 2025-04-05 00:40:01,887 | INFO     | ..............................
[2025-04-04 20:40:21] 2025-04-05 00:40:01,887 | INFO     | . Timing measurements:
[2025-04-04 20:40:21] 2025-04-05 00:40:01,925 | INFO     | . get job = 1 s
[2025-04-04 20:40:21] 2025-04-05 00:40:01,925 | INFO     | . initial setup = 9 s
[2025-04-04 20:40:21] 2025-04-05 00:40:01,925 | INFO     | . payload setup = 43 s
[2025-04-04 20:40:21] 2025-04-05 00:40:01,925 | INFO     | . stage-in = 0 s
[2025-04-04 20:40:21] 2025-04-05 00:40:01,925 | INFO     | . payload execution = 38651 s
[2025-04-04 20:40:21] 2025-04-05 00:40:01,925 | INFO     | . stage-out = 4 s
[2025-04-04 20:40:21] 2025-04-05 00:40:01,925 | INFO     | . log creation = 0 s
[2025-04-04 20:40:21] 2025-04-05 00:40:01,925 | INFO     | ..............................
[2025-04-04 20:40:21] 2025-04-05 00:40:02,734 | INFO     | 
[2025-04-04 20:40:21] 2025-04-05 00:40:02,734 | INFO     | job summary report
[2025-04-04 20:40:21] 2025-04-05 00:40:02,734 | INFO     | --------------------------------------------------
[2025-04-04 20:40:21] 2025-04-05 00:40:02,734 | INFO     | PanDA job id: 6586398212
[2025-04-04 20:40:21] 2025-04-05 00:40:02,734 | INFO     | task id: 43634898
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | errors: (none)
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | pilot state: finished 
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | transexitcode: 0
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | exeerrorcode: 0
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | exeerrordiag: 
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | exitcode: 0
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | exitmsg: OK
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | cpuconsumptiontime: 75783 s
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | nevents: 400
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | neventsw: 0
[2025-04-04 20:40:21] 2025-04-05 00:40:02,735 | INFO     | pid: 1578277
[2025-04-04 20:40:21] 2025-04-05 00:40:02,736 | INFO     | pgrp: 1578277
[2025-04-04 20:40:21] 2025-04-05 00:40:02,736 | INFO     | corecount: 9
[2025-04-04 20:40:21] 2025-04-05 00:40:02,736 | INFO     | event service: False
[2025-04-04 20:40:21] 2025-04-05 00:40:02,736 | INFO     | sizes: {0: 2416565, 1: 2417166, 2: 2417449, 3: 2417449, 4: 2417477, 16: 2417505, 27: 2417661, 38: 2417689, 43: 2417923, 50: 2417951, 38699: 2459484, 38705: 2468425
[2025-04-04 20:40:21] 2025-04-05 00:40:02,736 | INFO     | --------------------------------------------------
[2025-04-04 20:40:21] 2025-04-05 00:40:02,736 | INFO     | 
[2025-04-04 20:40:21] 2025-04-05 00:40:02,736 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-04 20:40:21] 2025-04-05 00:40:02,942 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,943 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,943 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,943 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,943 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,943 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,943 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,943 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,943 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,943 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,943 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,944 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,944 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,944 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 20:40:21] 2025-04-05 00:40:02,944 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,944 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 20:40:21] 2025-04-05 00:40:02,944 | INFO     | job 6586398212 has completed (purged errors)
[2025-04-04 20:40:21] 2025-04-05 00:40:02,945 | INFO     | overall cleanup function is called
[2025-04-04 20:40:21] 2025-04-05 00:40:03,992 | INFO     | --- collectZombieJob: --- 10, [1578277]
[2025-04-04 20:40:21] 2025-04-05 00:40:03,992 | INFO     | zombie collector waiting for pid 1578277
[2025-04-04 20:40:21] 2025-04-05 00:40:03,992 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 20:40:21] 2025-04-05 00:40:03,992 | INFO     | collected zombie processes
[2025-04-04 20:40:21] 2025-04-05 00:40:03,992 | INFO     | will attempt to kill all subprocesses of pid=1578277
[2025-04-04 20:40:21] 2025-04-05 00:40:04,570 | INFO     | process IDs to be killed: [1578277] (in reverse order)
[2025-04-04 20:40:21] 2025-04-05 00:40:04,657 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 20:40:21] 2025-04-05 00:40:04,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 20:40:21] 2025-04-05 00:40:04,667 | INFO     | did not find any defunct processes belonging to 1578277
[2025-04-04 20:40:21] 2025-04-05 00:40:04,677 | INFO     | did not find any defunct processes belonging to 1578277
[2025-04-04 20:40:21] 2025-04-05 00:40:04,677 | INFO     | ready for new job
[2025-04-04 20:40:21] 2025-04-05 00:40:04,677 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 20:40:21] 2025-04-05 00:40:04,680 | INFO     | **************************************
[2025-04-04 20:40:21] 2025-04-05 00:40:04,680 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 20:40:21] 2025-04-05 00:40:04,680 | INFO     | **************************************
[2025-04-04 20:40:21] 2025-04-05 00:40:04,680 | INFO     | 
[2025-04-04 20:40:21] 2025-04-05 00:40:04,695 | INFO     | architecture information:
[2025-04-04 20:40:21] 2025-04-05 00:40:04,695 | INFO     | executing command: cat /etc/os-release
[2025-04-04 20:40:21] 2025-04-05 00:40:04,710 | INFO     | cat /etc/os-release:
[2025-04-04 20:40:21] NAME="CentOS Linux"
[2025-04-04 20:40:21] VERSION="7 (Core)"
[2025-04-04 20:40:21] ID="centos"
[2025-04-04 20:40:21] ID_LIKE="rhel fedora"
[2025-04-04 20:40:21] VERSION_ID="7"
[2025-04-04 20:40:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 20:40:21] ANSI_COLOR="0;31"
[2025-04-04 20:40:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 20:40:21] HOME_URL="https://www.centos.org/"
[2025-04-04 20:40:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 20:40:21] 
[2025-04-04 20:40:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 20:40:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 20:40:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 20:40:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 20:40:21] 
[2025-04-04 20:40:21] 2025-04-05 00:40:04,711 | INFO     | **************************************
[2025-04-04 20:40:21] 2025-04-05 00:40:05,213 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-04 20:40:21] 2025-04-05 00:40:05,236 | INFO     | sufficient remaining disk space (55144611840 B)
[2025-04-04 20:40:21] 2025-04-05 00:40:05,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 20:40:21] 2025-04-05 00:40:05,237 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 20:40:21] 2025-04-05 00:40:05,237 | INFO     | update_server=False
[2025-04-04 20:40:21] 2025-04-05 00:40:05,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 20:40:21] 2025-04-05 00:40:05,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 20:40:21] 2025-04-05 00:40:05,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 20:40:21] 2025-04-05 00:40:05,238 | INFO     | aborting loop
[2025-04-04 20:40:21] 2025-04-05 00:40:05,696 | INFO     | all payload control threads have been joined
[2025-04-04 20:40:21] 2025-04-05 00:40:06,243 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 20:40:21] 2025-04-05 00:40:06,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 20:40:21] 2025-04-05 00:40:06,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 20:40:21] 2025-04-05 00:40:06,255 | INFO     | [job] retrieve thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:06,260 | INFO     | [job] job monitor thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:06,297 | INFO     | all data control threads have been joined
[2025-04-04 20:40:21] 2025-04-05 00:40:06,308 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:06,353 | INFO     | [payload] validate_post thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:06,549 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:06,593 | INFO     | all job control threads have been joined
[2025-04-04 20:40:21] 2025-04-05 00:40:06,597 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:06,701 | INFO     | [payload] control thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:06,926 | INFO     | [data] copytool_in thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:07,244 | INFO     | [job] validate thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:07,271 | INFO     | [data] copytool_out thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:07,303 | INFO     | [data] control thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:07,532 | INFO     | [payload] failed_post thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:07,599 | INFO     | [job] control thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:07,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 20:40:21] 2025-04-05 00:40:07,698 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:08,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 20:40:21] 2025-04-05 00:40:08,701 | INFO     | [job] queue monitor thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:12,034 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 20:40:21] 2025-04-05 00:40:13,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912227780416)>', '<ExcThread(monitor, started 139911344666368)>']
[2025-04-04 20:40:21] 2025-04-05 00:40:14,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 20:40:21] 2025-04-05 00:40:14,289 | INFO     | [monitor] control thread has ended
[2025-04-04 20:40:21] 2025-04-05 00:40:18,625 | INFO     | all workflow threads have been joined
[2025-04-04 20:40:21] 2025-04-05 00:40:18,625 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 20:40:21] 2025-04-05 00:40:18,626 | INFO     | traces error code: 0
[2025-04-04 20:40:21] 2025-04-05 00:40:18,626 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 20:40:21] 2025-04-05 00:40:19,796 [wrapper] ==== pilot stdout END ====
[2025-04-04 20:40:21] 2025-04-05 00:40:19,800 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 20:40:21] 2025-04-05 00:40:19,803 [wrapper] pilotpid: 1567830
[2025-04-04 20:40:21] 2025-04-05 00:40:19,807 [wrapper] Pilot exit status: 0
[2025-04-04 20:40:21] 2025-04-05 00:40:19,938 [wrapper] pandaids: 6586398212
[2025-04-04 20:40:21] 2025-04-05 00:40:20,382 [wrapper] cleanup supervisor_pilot 3879608 1567831
[2025-04-04 20:40:21] 2025-04-05 00:40:20,452 [wrapper] Test setup, not cleaning
[2025-04-04 20:40:21] 2025-04-05 00:40:20,494 [wrapper] apfmon messages muted
[2025-04-04 20:40:21] 2025-04-05 00:40:20,546 [wrapper] ==== wrapper stdout END ====
[2025-04-04 20:40:21] 2025-04-05 00:40:20,598 [wrapper] ==== wrapper stderr END ====
[2025-04-04 20:40:21]  *** Error codes and diagnostics ***
[2025-04-04 20:40:21]     "exeErrorCode": 0,
[2025-04-04 20:40:21]     "exeErrorDiag": "",
[2025-04-04 20:40:21]     "pilotErrorCode": 0,
[2025-04-04 20:40:21]     "pilotErrorDiag": "",
[2025-04-04 20:40:21]  *** Listing of results directory ***
[2025-04-04 20:40:21] total 676128
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 18:28 pilot3.tar.gz
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 19:05 queuedata.json
[2025-04-04 20:40:21] -rwx------. 1 boincer umatlas     37140 Apr  3 19:05 runpilot2-wrapper.sh
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas       100 Apr  4 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 20:40:21] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 09:51 run_atlas
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas       105 Apr  4 09:51 job.xml
[2025-04-04 20:40:21] -rw-r--r--. 2 boincer umatlas 362251574 Apr  4 09:51 EVNT.43634896._000688.pool.root.1
[2025-04-04 20:40:21] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 09:51 start_atlas.sh
[2025-04-04 20:40:21] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 09:51 shared
[2025-04-04 20:40:21] -rw-r--r--. 2 boincer umatlas    508889 Apr  4 09:51 input.tar.gz
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas         0 Apr  4 09:51 boinc_lockfile
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas      2596 Apr  4 09:51 pandaJob.out
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas       467 Apr  4 09:52 setup.sh.local
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas    979639 Apr  4 09:53 agis_schedconf.cvmfs.json
[2025-04-04 20:40:21] drwx------. 4 boincer umatlas      4096 Apr  4 09:53 pilot3
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas      6840 Apr  4 20:27 init_data.xml
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas 318986887 Apr  4 20:37 HITS.43634898._018567.pool.root.1
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas       532 Apr  4 20:37 boinc_task_state.xml
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas        95 Apr  4 20:39 pilot_heartbeat.json
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas      1056 Apr  4 20:39 memory_monitor_summary.json
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas   1603525 Apr  4 20:39 agis_ddmendpoints.agis.ALL.json
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas    602185 Apr  4 20:39 log.43634898._018567.job.log.tgz.1
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas      7737 Apr  4 20:40 heartbeat.json
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas        28 Apr  4 20:40 wrapper_checkpoint.txt
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 20:40 boinc_mmap_file
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas      4353 Apr  4 20:40 pilotlog.txt
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas   3036736 Apr  4 20:40 log.43634898._018567.job.log.1
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas       357 Apr  4 20:40 output.list
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas       620 Apr  4 20:40 runtime_log
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas   3655680 Apr  4 20:40 result.tar.gz
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas     11424 Apr  4 20:40 runtime_log.err
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas       665 Apr  4 20:40 4r2NDmwniK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmfBILDm9c94Jo.diag
[2025-04-04 20:40:21] -rw-r--r--. 1 boincer umatlas     20858 Apr  4 20:40 stderr.txt
[2025-04-04 20:40:21] HITS file was successfully produced:
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas 318986887 Apr  4 20:37 shared/HITS.pool.root.1
[2025-04-04 20:40:21]  *** Contents of shared directory: ***
[2025-04-04 20:40:21] total 669372
[2025-04-04 20:40:21] -rw-r--r--. 2 boincer umatlas 362251574 Apr  4 09:51 ATLAS.root_0
[2025-04-04 20:40:21] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 09:51 start_atlas.sh
[2025-04-04 20:40:21] -rw-r--r--. 2 boincer umatlas    508889 Apr  4 09:51 input.tar.gz
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas 318986887 Apr  4 20:37 HITS.pool.root.1
[2025-04-04 20:40:21] -rw-------. 1 boincer umatlas   3655680 Apr  4 20:40 result.tar.gz
20:40:22 (1557464): run_atlas exited; CPU time 76849.025945
20:40:22 (1557464): called boinc_finish(0)

</stderr_txt>
]]>

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