Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-04 08:38:16 (22060): Detected: vboxwrapper 26206
2025-04-04 08:38:16 (22060): Detected: BOINC client v8.0.2
2025-04-04 08:38:16 (22060): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-04 08:38:17 (22060): Successfully copied 'init_data.xml' to the shared directory.
2025-04-04 08:38:17 (22060): Create VM. (boinc_44411606792ca509, slot#2)
2025-04-04 08:38:18 (22060): Setting Memory Size for VM. (4400MB)
2025-04-04 08:38:18 (22060): Setting CPU Count for VM. (4)
2025-04-04 08:38:18 (22060): Setting Chipset Options for VM.
2025-04-04 08:38:18 (22060): Setting Graphics Controller Options for VM.
2025-04-04 08:38:19 (22060): Setting Boot Options for VM.
2025-04-04 08:38:19 (22060): Setting Network Configuration for NAT.
2025-04-04 08:38:19 (22060): Enabling VM Network Access.
2025-04-04 08:38:19 (22060): Disabling USB Support for VM.
2025-04-04 08:38:20 (22060): Disabling COM Port Support for VM.
2025-04-04 08:38:20 (22060): Disabling LPT Port Support for VM.
2025-04-04 08:38:20 (22060): Disabling Audio Support for VM.
2025-04-04 08:38:20 (22060): Disabling Clipboard Support for VM.
2025-04-04 08:38:21 (22060): Disabling Drag and Drop Support for VM.
2025-04-04 08:38:21 (22060): Adding storage controller(s) to VM.
2025-04-04 08:38:21 (22060): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-04 08:38:22 (22060): Adding VirtualBox Guest Additions to VM.
2025-04-04 08:38:22 (22060): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-04 08:38:22 (22060): forwarding host port 50450 to guest port 80
2025-04-04 08:38:22 (22060): Enabling remote desktop for VM.
2025-04-04 08:38:23 (22060): Required extension pack not installed, remote desktop not enabled.
2025-04-04 08:38:23 (22060): Enabling shared directory for VM.
2025-04-04 08:38:23 (22060): Starting VM using VBoxManage interface. (boinc_44411606792ca509, slot#2)
2025-04-04 08:38:28 (22060): Successfully started VM. (PID = '17056')
2025-04-04 08:38:28 (22060): Reporting VM Process ID to BOINC.
2025-04-04 08:38:28 (22060): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-04 08:38:28 (22060): Guest Log: CPUID EDX: 0x178bfbff
2025-04-04 08:38:28 (22060): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-04 08:38:28 (22060): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-04 08:38:28 (22060): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-04 08:38:28 (22060): Detected: Web Application Enabled (http://localhost:50450)
2025-04-04 08:38:28 (22060): Preference change detected
2025-04-04 08:38:28 (22060): Setting CPU throttle for VM. (100%)
2025-04-04 08:38:28 (22060): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-04 08:38:30 (22060): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-04 08:38:30 (22060): Guest Log: BIOS: Booting from Hard Disk...
2025-04-04 08:38:33 (22060): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-04 08:38:33 (22060): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-04 08:38:33 (22060): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-04 08:39:20 (22060): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-04 08:39:20 (22060): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-04 08:39:24 (22060): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-04 08:39:24 (22060): Guest Log: 00:00:00.000096 main     Log opened 2025-04-04T08:39:22.051156000Z
2025-04-04 08:39:24 (22060): Guest Log: 00:00:00.000179 main     OS Product: Linux
2025-04-04 08:39:24 (22060): Guest Log: 00:00:00.000205 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-04 08:39:24 (22060): Guest Log: 00:00:00.000225 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-04 08:39:24 (22060): Guest Log: 00:00:00.000244 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-04 08:39:24 (22060): Guest Log: 00:00:00.000245 main     Process ID: 1308
2025-04-04 08:39:24 (22060): Guest Log: 00:00:00.000245 main     Package type: LINUX_64BITS_GENERIC
2025-04-04 08:39:24 (22060): Guest Log: 00:00:00.000890 main     5.2.32 r132073 started. Verbose level = 0
2025-04-04 08:39:24 (22060): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-04 08:39:24 (22060): Guest Log: [INFO] Mounting shared directory
2025-04-04 08:39:24 (22060): Guest Log: [INFO] Checking for init_data.xml
2025-04-04 08:39:34 (22060): Guest Log: 00:00:10.003197 timesync vgsvcTimeSyncWorker: Radical guest time change: 17 967 045 955 000ns (GuestNow=1 743 773 929 098 933 000 ns GuestLast=1 743 755 962 052 978 000 ns fSetTimeLastLoop=true )
2025-04-04 08:39:35 (22060): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-04 08:39:35 (22060): Guest Log: [INFO] Detected branch: prod
2025-04-04 08:39:35 (22060): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-04 08:39:35 (22060): Guest Log: Copying input files
2025-04-04 08:39:36 (22060): Guest Log: Copied input files into RunAtlas.
2025-04-04 08:39:36 (22060): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-04 08:39:36 (22060): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-04 08:39:36 (22060): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-04 08:39:36 (22060): Guest Log: Further information can be found at the LHC@home message board.
2025-04-04 08:39:49 (22060): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-04 08:39:50 (22060): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-04 08:39:50 (22060): Guest Log: 2.6.3.0 1591 0 30152 144490 4 1 3117321 4096000 0 65024 0 0 n/a 1 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-04 08:39:53 (22060): Guest Log: copied the webapp to /var/www
2025-04-04 08:39:53 (22060): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-04 08:39:53 (22060): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-04 08:39:54 (22060): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-04 08:39:54 (22060): Guest Log:  *** Starting ATLAS job. (PandaID=6586538656 taskID=43634898) ***
2025-04-04 10:18:31 (22060): Status Report: Elapsed Time: '6000.000000'
2025-04-04 10:18:31 (22060): Status Report: CPU Time: '19208.640625'
2025-04-04 11:58:36 (22060): Status Report: Elapsed Time: '12000.000000'
2025-04-04 11:58:36 (22060): Status Report: CPU Time: '42813.078125'
2025-04-04 12:46:47 (22060): Guest Log:  *** Job finished ***
2025-04-04 12:46:47 (22060): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:45:52,833 | INFO     | [payload] control thread has finished
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:45:53,109 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:45:57,111 | INFO     | [data] queue_monitor thread has finished
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:45:58,940 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691357529920)>', '<ExcThread(monitor, started 140690042386176)>']
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:45:59,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:45:59,102 | INFO     | [monitor] control thread has ended
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:03,948 | INFO     | all workflow threads have been joined
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:03,948 | INFO     | end of generic workflow (traces error code: 0)
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:03,948 | INFO     | traces error code: 0
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:03,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:04,011 [wrapper] ==== pilot stdout END ====
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:04,014 [wrapper] ==== wrapper stdout RESUME ====
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:04,016 [wrapper] pilotpid: 5938
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:04,019 [wrapper] Pilot exit status: 0
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:04,475 [wrapper] pandaids: 6586538656
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:04,495 [wrapper] cleanup supervisor_pilot 16604 5939
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:04,498 [wrapper] Test setup, not cleaning
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:04,501 [wrapper] apfmon messages muted
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:04,504 [wrapper] ==== wrapper stdout END ====
2025-04-04 12:46:47 (22060): Guest Log: 2025-04-04 17:46:04,507 [wrapper] ==== wrapper stderr END ====
2025-04-04 12:46:47 (22060): Guest Log:  *** Error codes and diagnostics ***
2025-04-04 12:46:47 (22060): Guest Log:     "exeErrorCode": 0,
2025-04-04 12:46:47 (22060): Guest Log:     "exeErrorDiag": "",
2025-04-04 12:46:47 (22060): Guest Log:     "pilotErrorCode": 0,
2025-04-04 12:46:47 (22060): Guest Log:     "pilotErrorDiag": "",
2025-04-04 12:46:47 (22060): Guest Log:  *** Listing of results directory ***
2025-04-04 12:46:47 (22060): Guest Log: total 326492
2025-04-04 12:46:47 (22060): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr  4 01:20 pilot3.tar.gz
2025-04-04 12:46:47 (22060): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr  4 01:31 queuedata.json
2025-04-04 12:46:47 (22060): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  4 01:31 runpilot2-wrapper.sh
2025-04-04 12:46:47 (22060): Guest Log: -rwxr-xr-x. 1 atlas atlas      9184 Apr  4 13:38 init_data.xml
2025-04-04 12:46:47 (22060): Guest Log: -rwxr-xr-x. 1 atlas atlas    508891 Apr  4 13:38 input.tar.gz
2025-04-04 12:46:47 (22060): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr  4 13:38 start_atlas.sh
2025-04-04 12:46:47 (22060): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  4 13:38 EVNT.43634896._000284.pool.root.1 -> /data/./ATLAS.root_0
2025-04-04 12:46:47 (22060): Guest Log: -rw-r--r--. 1 atlas atlas      2598 Apr  4 13:39 pandaJob.out
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas       424 Apr  4 13:39 setup.sh.local
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas    979639 Apr  4 13:40 agis_schedconf.cvmfs.json
2025-04-04 12:46:47 (22060): Guest Log: drwx------. 4 atlas atlas      4096 Apr  4 13:40 pilot3
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas 327456116 Apr  4 17:44 HITS.43634898._019574.pool.root.1
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas      1026 Apr  4 17:45 memory_monitor_summary.json
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas   1603525 Apr  4 17:45 agis_ddmendpoints.agis.ALL.json
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas    325097 Apr  4 17:45 log.43634898._019574.job.log.tgz.1
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas        95 Apr  4 17:45 pilot_heartbeat.json
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas      7672 Apr  4 17:45 heartbeat.json
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas      4413 Apr  4 17:46 pilotlog.txt
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas   1228205 Apr  4 17:46 log.43634898._019574.job.log.1
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas       357 Apr  4 17:46 output.list
2025-04-04 12:46:47 (22060): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  4 17:46 runtime_log
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas   1566720 Apr  4 17:46 result.tar.gz
2025-04-04 12:46:47 (22060): Guest Log: -rw-r--r--. 1 atlas atlas     10953 Apr  4 17:46 runtime_log.err
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas       665 Apr  4 17:46 1cFNDmT5kK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmFQILDmpjZ0tn.diag
2025-04-04 12:46:47 (22060): Guest Log: Looking for outputfile HITS.43634898._019574.pool.root.1
2025-04-04 12:46:47 (22060): Guest Log: HITS file was successfully produced
2025-04-04 12:46:47 (22060): Guest Log: -rw-------. 1 atlas atlas 327456116 Apr  4 17:44 /home/atlas/RunAtlas/HITS.43634898._019574.pool.root.1
2025-04-04 12:46:48 (22060): Guest Log: Successfully finished the ATLAS job!
2025-04-04 12:46:48 (22060): Guest Log: Copying the results back to the shared directory!
2025-04-04 12:46:48 (22060): Guest Log:  *** Contents of shared directory: ***
2025-04-04 12:46:48 (22060): Guest Log: total 674348
2025-04-04 12:46:48 (22060): Guest Log: -rwxrwxrwx. 1 root root 360958708 Apr  4 13:38 ATLAS.root_0
2025-04-04 12:46:48 (22060): Guest Log: -rwxrwxrwx. 1 root root 327456116 Apr  4  2025 HITS.pool.root.1
2025-04-04 12:46:48 (22060): Guest Log: -rwxrwxrwx. 1 root root      9184 Apr  4 13:38 init_data.xml
2025-04-04 12:46:48 (22060): Guest Log: -rwxrwxrwx. 1 root root    508891 Apr  4 13:38 input.tar.gz
2025-04-04 12:46:48 (22060): Guest Log: -rwxrwxrwx. 1 root root   1566720 Apr  4  2025 result.tar.gz
2025-04-04 12:46:48 (22060): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr  4 13:38 start_atlas.sh
2025-04-04 12:46:48 (22060): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-04 12:46:48 (22060): VM Completion File Detected.
2025-04-04 12:46:48 (22060): Powering off VM.
2025-04-04 12:46:48 (22060): Successfully stopped VM.
2025-04-04 12:46:48 (22060): Deregistering VM. (boinc_44411606792ca509, slot#2)
2025-04-04 12:46:48 (22060): Removing network bandwidth throttle group from VM.
2025-04-04 12:46:48 (22060): Removing VM from VirtualBox.
12:46:54 (22060): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN