Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:03:17 (21711): wrapper (7.7.26015): starting
09:03:17 (21711): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 09:03:17] Arguments: --nthreads 8
[2025-04-04 09:03:17] Threads: 8
[2025-04-04 09:03:17] Checking for CVMFS
[2025-04-04 09:03:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 09:03:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 09:03:18] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 09:03:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 09:03:19] 2.11.2.0 20405 21038 252904 144489 0 587 15896769 18432000 14978 130560 0 73740679 98.387 259196721 58713 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-04 09:03:19] CVMFS is ok
[2025-04-04 09:03:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 09:03:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 09:03:19] Further information can be found at the LHC@home message board.
[2025-04-04 09:03:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 09:03:19] Checking for apptainer binary...
[2025-04-04 09:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 09:03:19] Running /usr/bin/apptainer --version
[2025-04-04 09:03:19] apptainer version 1.3.2-1.el7
[2025-04-04 09:03:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 09:03:47] c-211-37.aglt2.org
[2025-04-04 09:03:47] apptainer works
[2025-04-04 09:03:47] Set ATHENA_PROC_NUMBER=8
[2025-04-04 09:03:47] Set ATHENA_CORE_NUMBER=8
[2025-04-04 09:03:47] Starting ATLAS job with PandaID=6581363202
[2025-04-04 09:03:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 17:05:31]  *** The last 200 lines of the pilot log: ***
[2025-04-04 17:05:31] 2025-04-04 21:05:09,693 | INFO     | intersect: -18731136941.35075
[2025-04-04 17:05:31] 2025-04-04 21:05:09,694 | INFO     | chi2: 8.771216620961182
[2025-04-04 17:05:31] 2025-04-04 21:05:09,694 | INFO     | current chi2=8.771216620961182 (change=37.749818678681365 %)
[2025-04-04 17:05:31] 2025-04-04 21:05:09,694 | INFO     | model: linear, x: [1743772941.0, 1743773002.0, 1743773063.0, 1743773124.0, 1743773185.0, 1743773246.0, 1743773307.0, 1743773368.0, 1743773429.0, 1743773490.0, 1743
[2025-04-04 17:05:31] 2025-04-04 21:05:09,695 | INFO     | sum of square deviations: 29208413262.536175
[2025-04-04 17:05:31] 2025-04-04 21:05:09,699 | INFO     | sum of deviations: 187284842386.1164
[2025-04-04 17:05:31] 2025-04-04 21:05:09,699 | INFO     | mean x: 1743786788.2945056
[2025-04-04 17:05:31] 2025-04-04 21:05:09,700 | INFO     | mean y: 2530589.0065934067
[2025-04-04 17:05:31] 2025-04-04 21:05:09,700 | INFO     | -- intersect: -11178659942.13461
[2025-04-04 17:05:31] 2025-04-04 21:05:09,700 | INFO     | intersect: -11178659942.13461
[2025-04-04 17:05:31] 2025-04-04 21:05:09,700 | INFO     | chi2: 5.452476265620281
[2025-04-04 17:05:31] 2025-04-04 21:05:09,700 | INFO     | current chi2=5.452476265620281 (change=37.83671637307278 %)
[2025-04-04 17:05:31] 2025-04-04 21:05:09,701 | INFO     | model: linear, x: [1743773246.0, 1743773307.0, 1743773368.0, 1743773429.0, 1743773490.0, 1743773551.0, 1743773612.0, 1743773673.0, 1743773734.0, 1743773795.0, 1743
[2025-04-04 17:05:31] 2025-04-04 21:05:09,701 | INFO     | sum of square deviations: 28255991744.597786
[2025-04-04 17:05:31] 2025-04-04 21:05:09,706 | INFO     | sum of deviations: 84392050421.91785
[2025-04-04 17:05:31] 2025-04-04 21:05:09,706 | INFO     | mean x: 1743786940.797778
[2025-04-04 17:05:31] 2025-04-04 21:05:09,706 | INFO     | mean y: 2547060.3177777776
[2025-04-04 17:05:31] 2025-04-04 21:05:09,706 | INFO     | -- intersect: -5205613982.588229
[2025-04-04 17:05:31] 2025-04-04 21:05:09,706 | INFO     | intersect: -5205613982.588229
[2025-04-04 17:05:31] 2025-04-04 21:05:09,707 | INFO     | chi2: 3.6337066974767342
[2025-04-04 17:05:31] 2025-04-04 21:05:09,707 | INFO     | current chi2=3.6337066974767342 (change=33.356762680683424 %)
[2025-04-04 17:05:31] 2025-04-04 21:05:09,707 | INFO     | model: linear, x: [1743773551.0, 1743773612.0, 1743773673.0, 1743773734.0, 1743773795.0, 1743773856.0, 1743773917.0, 1743773978.0, 1743774039.0, 1743774100.0, 1743
[2025-04-04 17:05:31] 2025-04-04 21:05:09,708 | INFO     | sum of square deviations: 27324500851.64948
[2025-04-04 17:05:31] 2025-04-04 21:05:09,712 | INFO     | sum of deviations: -4526946127.982063
[2025-04-04 17:05:31] 2025-04-04 21:05:09,712 | INFO     | mean x: 1743787093.3011236
[2025-04-04 17:05:31] 2025-04-04 21:05:09,712 | INFO     | mean y: 2561618.1640449436
[2025-04-04 17:05:31] 2025-04-04 21:05:09,713 | INFO     | -- intersect: 291460956.99928975
[2025-04-04 17:05:31] 2025-04-04 21:05:09,713 | INFO     | intersect: 291460956.99928975
[2025-04-04 17:05:31] 2025-04-04 21:05:09,713 | INFO     | chi2: 2.2767396154937107
[2025-04-04 17:05:31] 2025-04-04 21:05:09,714 | INFO     | current chi2=2.2767396154937107 (change=37.34388036671504 %)
[2025-04-04 17:05:31] 2025-04-04 21:05:09,714 | INFO     | model: linear, x: [1743773856.0, 1743773917.0, 1743773978.0, 1743774039.0, 1743774100.0, 1743774161.0, 1743774222.0, 1743774283.0, 1743774344.0, 1743774405.0, 1743
[2025-04-04 17:05:31] 2025-04-04 21:05:09,714 | INFO     | sum of square deviations: 26413708021.190884
[2025-04-04 17:05:31] 2025-04-04 21:05:09,718 | INFO     | sum of deviations: -77225255181.10916
[2025-04-04 17:05:31] 2025-04-04 21:05:09,719 | INFO     | mean x: 1743787245.8045454
[2025-04-04 17:05:31] 2025-04-04 21:05:09,719 | INFO     | mean y: 2573772.7545454544
[2025-04-04 17:05:31] 2025-04-04 21:05:09,719 | INFO     | -- intersect: 5100851338.735911
[2025-04-04 17:05:31] 2025-04-04 21:05:09,719 | INFO     | intersect: 5100851338.735911
[2025-04-04 17:05:31] 2025-04-04 21:05:09,719 | INFO     | chi2: 1.2979072918091772
[2025-04-04 17:05:31] 2025-04-04 21:05:09,720 | INFO     | current chi2=1.2979072918091772 (change=42.992721566549186 %)
[2025-04-04 17:05:31] 2025-04-04 21:05:09,720 | INFO     | model: linear, x: [1743774161.0, 1743774222.0, 1743774283.0, 1743774344.0, 1743774405.0, 1743774466.0, 1743774527.0, 1743774589.0, 1743774649.0, 1743774711.0, 1743
[2025-04-04 17:05:31] 2025-04-04 21:05:09,720 | INFO     | sum of square deviations: 25523380690.72178
[2025-04-04 17:05:31] 2025-04-04 21:05:09,724 | INFO     | sum of deviations: -108908269989.58176
[2025-04-04 17:05:31] 2025-04-04 21:05:09,724 | INFO     | mean x: 1743787398.3080459
[2025-04-04 17:05:31] 2025-04-04 21:05:09,724 | INFO     | mean y: 2579193.28045977
[2025-04-04 17:05:31] 2025-04-04 21:05:09,724 | INFO     | -- intersect: 7443320334.927101
[2025-04-04 17:05:31] 2025-04-04 21:05:09,724 | INFO     | intersect: 7443320334.927101
[2025-04-04 17:05:31] 2025-04-04 21:05:09,725 | INFO     | chi2: 1.0950690954178826
[2025-04-04 17:05:31] 2025-04-04 21:05:09,725 | INFO     | current chi2=1.0950690954178826 (change=15.62809591034462 %)
[2025-04-04 17:05:31] 2025-04-04 21:05:09,725 | INFO     | left removable region: 60
[2025-04-04 17:05:31] 2025-04-04 21:05:09,725 | INFO     | model: linear, x: [1743775991.0, 1743776052.0, 1743776114.0, 1743776174.0, 1743776236.0, 1743776296.0, 1743776358.0, 1743776421.0, 1743776479.0, 1743776541.0, 1743
[2025-04-04 17:05:31] 2025-04-04 21:05:09,726 | INFO     | sum of square deviations: 19696444011.839546
[2025-04-04 17:05:31] 2025-04-04 21:05:09,729 | INFO     | sum of deviations: -44966769188.23055
[2025-04-04 17:05:31] 2025-04-04 21:05:09,729 | INFO     | mean x: 1743788130.3132832
[2025-04-04 17:05:31] 2025-04-04 21:05:09,729 | INFO     | mean y: 2577906.1378446114
[2025-04-04 17:05:31] 2025-04-04 21:05:09,729 | INFO     | -- intersect: 3983627395.1643763
[2025-04-04 17:05:31] 2025-04-04 21:05:09,729 | INFO     | intersect: 3983627395.1643763
[2025-04-04 17:05:31] 2025-04-04 21:05:09,730 | INFO     | chi2: 0.1988502356020444
[2025-04-04 17:05:31] 2025-04-04 21:05:09,730 | INFO     | -- intersect: 3983627395.1643763
[2025-04-04 17:05:31] 2025-04-04 21:05:09,730 | INFO     | current memory leak: -2.28 B/s (using 399 data points, chi2=0.20)
[2025-04-04 17:05:31] 2025-04-04 21:05:09,731 | INFO     | ..............................
[2025-04-04 17:05:31] 2025-04-04 21:05:09,731 | INFO     | . Timing measurements:
[2025-04-04 17:05:31] 2025-04-04 21:05:09,731 | INFO     | . get job = 0 s
[2025-04-04 17:05:31] 2025-04-04 21:05:09,731 | INFO     | . initial setup = 5 s
[2025-04-04 17:05:31] 2025-04-04 21:05:09,731 | INFO     | . payload setup = 110 s
[2025-04-04 17:05:31] 2025-04-04 21:05:09,731 | INFO     | . stage-in = 0 s
[2025-04-04 17:05:31] 2025-04-04 21:05:09,731 | INFO     | . payload execution = 28484 s
[2025-04-04 17:05:31] 2025-04-04 21:05:09,731 | INFO     | . stage-out = 3 s
[2025-04-04 17:05:31] 2025-04-04 21:05:09,732 | INFO     | . log creation = 1 s
[2025-04-04 17:05:31] 2025-04-04 21:05:09,732 | INFO     | ..............................
[2025-04-04 17:05:31] 2025-04-04 21:05:09,823 | INFO     | 
[2025-04-04 17:05:31] 2025-04-04 21:05:09,823 | INFO     | job summary report
[2025-04-04 17:05:31] 2025-04-04 21:05:09,823 | INFO     | --------------------------------------------------
[2025-04-04 17:05:31] 2025-04-04 21:05:09,823 | INFO     | PanDA job id: 6581363202
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | task id: 43634882
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | errors: (none)
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | pilot state: finished 
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | transexitcode: 0
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | exeerrorcode: 0
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | exeerrordiag: 
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | exitcode: 0
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | exitmsg: OK
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | cpuconsumptiontime: 59461 s
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | nevents: 400
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | neventsw: 0
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | pid: 23551
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | pgrp: 23551
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | corecount: 8
[2025-04-04 17:05:31] 2025-04-04 21:05:09,824 | INFO     | event service: False
[2025-04-04 17:05:31] 2025-04-04 21:05:09,825 | INFO     | sizes: {0: 2416541, 1: 2417226, 2: 2417425, 13: 2417425, 23: 2417481, 34: 2417509, 45: 2417665, 56: 2417693, 60: 2417927, 67: 2417955, 28596: 2454779, 28600: 24637
[2025-04-04 17:05:31] 2025-04-04 21:05:09,825 | INFO     | --------------------------------------------------
[2025-04-04 17:05:31] 2025-04-04 21:05:09,825 | INFO     | 
[2025-04-04 17:05:31] 2025-04-04 21:05:09,825 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-04 17:05:31] 2025-04-04 21:05:09,975 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,977 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 17:05:31] 2025-04-04 21:05:09,977 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,977 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 17:05:31] 2025-04-04 21:05:09,977 | INFO     | job 6581363202 has completed (purged errors)
[2025-04-04 17:05:31] 2025-04-04 21:05:09,977 | INFO     | overall cleanup function is called
[2025-04-04 17:05:31] 2025-04-04 21:05:10,994 | INFO     | --- collectZombieJob: --- 10, [23551]
[2025-04-04 17:05:31] 2025-04-04 21:05:10,994 | INFO     | zombie collector waiting for pid 23551
[2025-04-04 17:05:31] 2025-04-04 21:05:10,994 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 17:05:31] 2025-04-04 21:05:10,995 | INFO     | collected zombie processes
[2025-04-04 17:05:31] 2025-04-04 21:05:10,995 | INFO     | will attempt to kill all subprocesses of pid=23551
[2025-04-04 17:05:31] 2025-04-04 21:05:11,348 | INFO     | process IDs to be killed: [23551] (in reverse order)
[2025-04-04 17:05:31] 2025-04-04 21:05:11,474 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 17:05:31] 2025-04-04 21:05:11,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 17:05:31] 2025-04-04 21:05:11,486 | INFO     | did not find any defunct processes belonging to 23551
[2025-04-04 17:05:31] 2025-04-04 21:05:11,495 | INFO     | did not find any defunct processes belonging to 23551
[2025-04-04 17:05:31] 2025-04-04 21:05:11,495 | INFO     | ready for new job
[2025-04-04 17:05:31] 2025-04-04 21:05:11,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 17:05:31] 2025-04-04 21:05:11,498 | INFO     | ***************************************
[2025-04-04 17:05:31] 2025-04-04 21:05:11,498 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-04 17:05:31] 2025-04-04 21:05:11,498 | INFO     | ***************************************
[2025-04-04 17:05:31] 2025-04-04 21:05:11,498 | INFO     | 
[2025-04-04 17:05:31] 2025-04-04 21:05:11,501 | INFO     | architecture information:
[2025-04-04 17:05:31] 2025-04-04 21:05:11,502 | INFO     | executing command: cat /etc/os-release
[2025-04-04 17:05:31] 2025-04-04 21:05:11,519 | INFO     | cat /etc/os-release:
[2025-04-04 17:05:31] NAME="CentOS Linux"
[2025-04-04 17:05:31] VERSION="7 (Core)"
[2025-04-04 17:05:31] ID="centos"
[2025-04-04 17:05:31] ID_LIKE="rhel fedora"
[2025-04-04 17:05:31] VERSION_ID="7"
[2025-04-04 17:05:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 17:05:31] ANSI_COLOR="0;31"
[2025-04-04 17:05:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 17:05:31] HOME_URL="https://www.centos.org/"
[2025-04-04 17:05:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 17:05:31] 
[2025-04-04 17:05:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 17:05:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 17:05:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 17:05:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 17:05:31] 
[2025-04-04 17:05:31] 2025-04-04 21:05:11,520 | INFO     | ***************************************
[2025-04-04 17:05:31] 2025-04-04 21:05:12,023 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-04 17:05:31] 2025-04-04 21:05:12,073 | INFO     | sufficient remaining disk space (74905026560 B)
[2025-04-04 17:05:31] 2025-04-04 21:05:12,074 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 17:05:31] 2025-04-04 21:05:12,074 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 17:05:31] 2025-04-04 21:05:12,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 17:05:31] 2025-04-04 21:05:12,535 | INFO     | aborting loop
[2025-04-04 17:05:31] 2025-04-04 21:05:12,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 17:05:31] 2025-04-04 21:05:12,892 | INFO     | all data control threads have been joined
[2025-04-04 17:05:31] 2025-04-04 21:05:13,028 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 17:05:31] 2025-04-04 21:05:13,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 17:05:31] 2025-04-04 21:05:13,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 17:05:31] 2025-04-04 21:05:13,080 | INFO     | [job] retrieve thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:13,169 | INFO     | all payload control threads have been joined
[2025-04-04 17:05:31] 2025-04-04 21:05:13,195 | INFO     | all job control threads have been joined
[2025-04-04 17:05:31] 2025-04-04 21:05:13,301 | INFO     | [data] copytool_in thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:13,302 | INFO     | [job] validate thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:13,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 17:05:31] 2025-04-04 21:05:13,398 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:13,399 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:13,541 | INFO     | [job] job monitor thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:13,898 | INFO     | [data] control thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:14,030 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:14,175 | INFO     | [payload] control thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:14,201 | INFO     | [job] control thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:14,377 | INFO     | [payload] failed_post thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:14,589 | INFO     | [data] copytool_out thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:14,679 | INFO     | [payload] validate_post thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:14,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 17:05:31] 2025-04-04 21:05:15,842 | INFO     | [job] queue monitor thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:17,397 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:22,841 | INFO     | job.realtimelogging is not enabled
[2025-04-04 17:05:31] 2025-04-04 21:05:23,847 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 17:05:31] 2025-04-04 21:05:24,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139715839240000)>', '<ExcThread(monitor, started 139715411961600)>']
[2025-04-04 17:05:31] 2025-04-04 21:05:25,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 17:05:31] 2025-04-04 21:05:25,101 | INFO     | [monitor] control thread has ended
[2025-04-04 17:05:31] 2025-04-04 21:05:29,913 | INFO     | all workflow threads have been joined
[2025-04-04 17:05:31] 2025-04-04 21:05:29,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 17:05:31] 2025-04-04 21:05:29,914 | INFO     | traces error code: 0
[2025-04-04 17:05:31] 2025-04-04 21:05:29,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 17:05:31] 2025-04-04 21:05:30,054 [wrapper] ==== pilot stdout END ====
[2025-04-04 17:05:31] 2025-04-04 21:05:30,084 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 17:05:31] 2025-04-04 21:05:30,121 [wrapper] pilotpid: 49908
[2025-04-04 17:05:31] 2025-04-04 21:05:30,140 [wrapper] Pilot exit status: 0
[2025-04-04 17:05:31] 2025-04-04 21:05:30,235 [wrapper] pandaids: 6581363202
[2025-04-04 17:05:31] 2025-04-04 21:05:30,603 [wrapper] cleanup supervisor_pilot 26675 49909
[2025-04-04 17:05:31] 2025-04-04 21:05:30,621 [wrapper] Test setup, not cleaning
[2025-04-04 17:05:31] 2025-04-04 21:05:30,645 [wrapper] apfmon messages muted
[2025-04-04 17:05:31] 2025-04-04 21:05:30,654 [wrapper] ==== wrapper stdout END ====
[2025-04-04 17:05:31] 2025-04-04 21:05:30,695 [wrapper] ==== wrapper stderr END ====
[2025-04-04 17:05:31]  *** Error codes and diagnostics ***
[2025-04-04 17:05:31]     "exeErrorCode": 0,
[2025-04-04 17:05:31]     "exeErrorDiag": "",
[2025-04-04 17:05:31]     "pilotErrorCode": 0,
[2025-04-04 17:05:31]     "pilotErrorDiag": "",
[2025-04-04 17:05:31]  *** Listing of results directory ***
[2025-04-04 17:05:31] total 630932
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas    494584 Mar 31 18:02 pilot3.tar.gz
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas      5112 Mar 31 18:09 queuedata.json
[2025-04-04 17:05:31] -rwx------ 1 boincer umatlas     37140 Mar 31 18:11 runpilot2-wrapper.sh
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas       100 Apr  4 09:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 17:05:31] -rwxr-xr-x 1 boincer umatlas      7986 Apr  4 09:03 run_atlas
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas       105 Apr  4 09:03 job.xml
[2025-04-04 17:05:31] -rw-r--r-- 2 boincer umatlas 343054888 Apr  4 09:03 EVNT.43634880._000952.pool.root.1
[2025-04-04 17:05:31] -rw-r--r-- 2 boincer umatlas     17571 Apr  4 09:03 start_atlas.sh
[2025-04-04 17:05:31] drwxrwx--x 2 boincer umatlas      4096 Apr  4 09:03 shared
[2025-04-04 17:05:31] -rw-r--r-- 2 boincer umatlas    507267 Apr  4 09:03 input.tar.gz
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas         0 Apr  4 09:03 boinc_lockfile
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas      2619 Apr  4 09:03 pandaJob.out
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas       467 Apr  4 09:04 setup.sh.local
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas    979639 Apr  4 09:05 agis_schedconf.cvmfs.json
[2025-04-04 17:05:31] drwx------ 4 boincer umatlas      4096 Apr  4 09:05 pilot3
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas      6336 Apr  4 17:01 init_data.xml
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas 291526232 Apr  4 17:03 HITS.43634882._011884.pool.root.1
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas       531 Apr  4 17:03 boinc_task_state.xml
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas        95 Apr  4 17:04 pilot_heartbeat.json
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas      1081 Apr  4 17:04 memory_monitor_summary.json
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas   1603525 Apr  4 17:04 agis_ddmendpoints.agis.ALL.json
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas    590073 Apr  4 17:04 log.43634882._011884.job.log.tgz.1
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas      7759 Apr  4 17:05 heartbeat.json
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas      8192 Apr  4 17:05 boinc_mmap_file
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas        28 Apr  4 17:05 wrapper_checkpoint.txt
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas      4291 Apr  4 17:05 pilotlog.txt
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas   3241567 Apr  4 17:05 log.43634882._011884.job.log.1
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas       357 Apr  4 17:05 output.list
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas       620 Apr  4 17:05 runtime_log
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas   3850240 Apr  4 17:05 result.tar.gz
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas     11420 Apr  4 17:05 runtime_log.err
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas       664 Apr  4 17:05 4FuKDmJXcJ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCoCLDmbP6yrm.diag
[2025-04-04 17:05:31] -rw-r--r-- 1 boincer umatlas     21647 Apr  4 17:05 stderr.txt
[2025-04-04 17:05:31] HITS file was successfully produced:
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas 291526232 Apr  4 17:03 shared/HITS.pool.root.1
[2025-04-04 17:05:31]  *** Contents of shared directory: ***
[2025-04-04 17:05:31] total 623992
[2025-04-04 17:05:31] -rw-r--r-- 2 boincer umatlas 343054888 Apr  4 09:03 ATLAS.root_0
[2025-04-04 17:05:31] -rw-r--r-- 2 boincer umatlas     17571 Apr  4 09:03 start_atlas.sh
[2025-04-04 17:05:31] -rw-r--r-- 2 boincer umatlas    507267 Apr  4 09:03 input.tar.gz
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas 291526232 Apr  4 17:03 HITS.pool.root.1
[2025-04-04 17:05:31] -rw------- 1 boincer umatlas   3850240 Apr  4 17:05 result.tar.gz
17:05:33 (21711): run_atlas exited; CPU time 57671.103299
17:05:33 (21711): called boinc_finish(0)

</stderr_txt>
]]>

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