Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:09:51 (1572298): wrapper (7.7.26015): starting
21:09:51 (1572298): wrapper: running run_atlas (--nthreads 12)
[2025-04-04 21:09:51] Arguments: --nthreads 12
[2025-04-04 21:09:51] Threads: 12
[2025-04-04 21:09:51] Checking for CVMFS
[2025-04-04 21:09:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 21:09:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 21:09:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 21:09:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 21:09:51] 2.12.7.0 20930 14854 239036 144500 3 245 43366067 46080001 7808 130560 0 154023300 99.897 54361107 18937 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-04 21:09:51] CVMFS is ok
[2025-04-04 21:09:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 21:09:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 21:09:51] Further information can be found at the LHC@home message board.
[2025-04-04 21:09:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 21:09:51] Checking for apptainer binary...
[2025-04-04 21:09:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 21:09:51] Running /usr/bin/apptainer --version
[2025-04-04 21:09:52] apptainer version 1.3.6-1.el9
[2025-04-04 21:09:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 21:09:52] mff2103.farm.particle.cz
[2025-04-04 21:09:52] apptainer works
[2025-04-04 21:09:52] Set ATHENA_PROC_NUMBER=12
[2025-04-04 21:09:52] Set ATHENA_CORE_NUMBER=12
[2025-04-04 21:09:52] Starting ATLAS job with PandaID=6587176919
[2025-04-04 21:09:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 22:50:34]  *** The last 200 lines of the pilot log: ***
[2025-04-04 22:50:34]  mtime=0
[2025-04-04 22:50:34]  protocol_id=None
[2025-04-04 22:50:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-04 22:50:34]  replicas=None
[2025-04-04 22:50:34]  scope=mc23_13p6TeV
[2025-04-04 22:50:34]  status=None
[2025-04-04 22:50:34]  status_code=0
[2025-04-04 22:50:34]  storage_token=
[2025-04-04 22:50:34]  surl=/scratch/.boinc/slots/2/PanDA_Pilot-6587176919/log.43634898._020445.job.log.tgz.1
[2025-04-04 22:50:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/5f/log.43634898._020445.job.log.tgz.1
[2025-04-04 22:50:34]  workdir=None
[2025-04-04 22:50:34] ]
[2025-04-04 22:50:34] 2025-04-04 20:50:11,828 | INFO     | transferring file log.43634898._020445.job.log.tgz.1 from /scratch/.boinc/slots/2/PanDA_Pilot-6587176919/log.43634898._020445.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-04 22:50:34] 2025-04-04 20:50:11,828 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/2/PanDA_Pilot-6587176919/log.43634898._020445.job.log.tgz.1 /scratch/.boinc/slots/2/log.43634898._020445.j
[2025-04-04 22:50:34] 2025-04-04 20:50:11,856 | INFO     | adding to output.list: log.43634898._020445.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/5f/log.43634898._020445.job.log.tg
[2025-04-04 22:50:34] 2025-04-04 20:50:11,857 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-04 22:50:34] 2025-04-04 20:50:11,857 | INFO     | summary of transferred files:
[2025-04-04 22:50:34] 2025-04-04 20:50:11,857 | INFO     |  -- lfn=log.43634898._020445.job.log.tgz.1, status_code=0, status=transferred
[2025-04-04 22:50:34] 2025-04-04 20:50:11,857 | INFO     | stage-out finished correctly
[2025-04-04 22:50:34] 2025-04-04 20:50:13,009 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-04 22:50:34] 2025-04-04 20:50:13,207 | INFO     | monitor loop #424: job 0:6587176919 is in state 'finished'
[2025-04-04 22:50:34] 2025-04-04 20:50:13,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 22:50:34] 2025-04-04 20:50:15,130 | INFO     | job 6587176919 has state=finished
[2025-04-04 22:50:34] 2025-04-04 20:50:15,130 | INFO     | preparing for final server update for job 6587176919 in state='finished'
[2025-04-04 22:50:34] 2025-04-04 20:50:15,131 | INFO     | this job has now completed (state=finished)
[2025-04-04 22:50:34] 2025-04-04 20:50:15,131 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-04 22:50:34] 2025-04-04 20:50:15,131 | INFO     | log transfer has been attempted: DONE
[2025-04-04 22:50:34] 2025-04-04 20:50:15,131 | INFO     | job 6587176919 has finished - writing final server update
[2025-04-04 22:50:34] 2025-04-04 20:50:15,131 | INFO     | total number of processed events: 400 (read)
[2025-04-04 22:50:34] 2025-04-04 20:50:15,138 | INFO     | executing command: lscpu
[2025-04-04 22:50:34] 2025-04-04 20:50:15,231 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-04 22:50:34] 2025-04-04 20:50:15,711 | INFO     | monitor loop #425: job 0:6587176919 is in state 'finished'
[2025-04-04 22:50:34] 2025-04-04 20:50:15,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 22:50:34] 2025-04-04 20:50:18,216 | INFO     | monitor loop #426: job 0:6587176919 is in state 'finished'
[2025-04-04 22:50:34] 2025-04-04 20:50:18,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 22:50:34] 2025-04-04 20:50:19,897 | INFO     | PID=1579348 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-04 22:50:34] 2025-04-04 20:50:19,897 | INFO     | .. there are 10 such processes running
[2025-04-04 22:50:34] 2025-04-04 20:50:20,719 | INFO     | monitor loop #427: job 0:6587176919 is in state 'finished'
[2025-04-04 22:50:34] 2025-04-04 20:50:20,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 22:50:34] 2025-04-04 20:50:20,764 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-04 22:50:34] 2025-04-04 20:50:20,765 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6587176919/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 22:50:34] 2025-04-04 20:50:20,765 | INFO     | extracted standard info from prmon json
[2025-04-04 22:50:34] 2025-04-04 20:50:20,765 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 22:50:34] 2025-04-04 20:50:20,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 22:50:34] 2025-04-04 20:50:20,766 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 22:50:34] 2025-04-04 20:50:20,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 22:50:34] 2025-04-04 20:50:20,768 | INFO     | fitting pss+swap vs Time
[2025-04-04 22:50:34] 2025-04-04 20:50:20,769 | INFO     | sum of square deviations: 233641590.0
[2025-04-04 22:50:34] 2025-04-04 20:50:20,769 | INFO     | sum of deviations: 30660865052.000008
[2025-04-04 22:50:34] 2025-04-04 20:50:20,769 | INFO     | mean x: 1743796885.0
[2025-04-04 22:50:34] 2025-04-04 20:50:20,769 | INFO     | mean y: 2664203.10989011
[2025-04-04 22:50:34] 2025-04-04 20:50:20,769 | INFO     | -- intersect: -228836392101.39044
[2025-04-04 22:50:34] 2025-04-04 20:50:20,769 | INFO     | intersect: -228836392101.39044
[2025-04-04 22:50:34] 2025-04-04 20:50:20,770 | INFO     | chi2: 2.172832030353286
[2025-04-04 22:50:34] 2025-04-04 20:50:20,770 | INFO     | -- intersect: -228836392101.39044
[2025-04-04 22:50:34] 2025-04-04 20:50:20,770 | INFO     | current memory leak: 131.23 B/s (using 91 data points, chi2=2.17)
[2025-04-04 22:50:34] 2025-04-04 20:50:20,770 | INFO     | ..............................
[2025-04-04 22:50:34] 2025-04-04 20:50:20,770 | INFO     | . Timing measurements:
[2025-04-04 22:50:34] 2025-04-04 20:50:20,770 | INFO     | . get job = 0 s
[2025-04-04 22:50:34] 2025-04-04 20:50:20,771 | INFO     | . initial setup = 1 s
[2025-04-04 22:50:34] 2025-04-04 20:50:20,771 | INFO     | . payload setup = 7 s
[2025-04-04 22:50:34] 2025-04-04 20:50:20,771 | INFO     | . stage-in = 0 s
[2025-04-04 22:50:34] 2025-04-04 20:50:20,771 | INFO     | . payload execution = 5977 s
[2025-04-04 22:50:34] 2025-04-04 20:50:20,771 | INFO     | . stage-out = 0 s
[2025-04-04 22:50:34] 2025-04-04 20:50:20,771 | INFO     | . log creation = 0 s
[2025-04-04 22:50:34] 2025-04-04 20:50:20,771 | INFO     | ..............................
[2025-04-04 22:50:34] 2025-04-04 20:50:20,873 | INFO     | 
[2025-04-04 22:50:34] 2025-04-04 20:50:20,873 | INFO     | job summary report
[2025-04-04 22:50:34] 2025-04-04 20:50:20,873 | INFO     | --------------------------------------------------
[2025-04-04 22:50:34] 2025-04-04 20:50:20,873 | INFO     | PanDA job id: 6587176919
[2025-04-04 22:50:34] 2025-04-04 20:50:20,873 | INFO     | task id: 43634898
[2025-04-04 22:50:34] 2025-04-04 20:50:20,873 | INFO     | errors: (none)
[2025-04-04 22:50:34] 2025-04-04 20:50:20,873 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | pilot state: finished 
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | transexitcode: 0
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | exeerrorcode: 0
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | exeerrordiag: 
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | exitcode: 0
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | exitmsg: OK
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | cpuconsumptiontime: 58601 s
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | nevents: 400
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | neventsw: 0
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | pid: 1600849
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | pgrp: 1600849
[2025-04-04 22:50:34] 2025-04-04 20:50:20,874 | INFO     | corecount: 12
[2025-04-04 22:50:34] 2025-04-04 20:50:20,875 | INFO     | event service: False
[2025-04-04 22:50:34] 2025-04-04 20:50:20,875 | INFO     | sizes: {0: 2417286, 1: 2417428, 6: 2417634, 12: 2417662, 5988: 2444369, 5990: 2453312, 5991: 2453496, 5999: 2453666}
[2025-04-04 22:50:34] 2025-04-04 20:50:20,875 | INFO     | --------------------------------------------------
[2025-04-04 22:50:34] 2025-04-04 20:50:20,875 | INFO     | 
[2025-04-04 22:50:34] 2025-04-04 20:50:20,875 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-04-04 22:50:34] 2025-04-04 20:50:20,902 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,903 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,903 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,903 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,904 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 22:50:34] 2025-04-04 20:50:20,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,904 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 22:50:34] 2025-04-04 20:50:20,905 | INFO     | job 6587176919 has completed (purged errors)
[2025-04-04 22:50:34] 2025-04-04 20:50:20,905 | INFO     | overall cleanup function is called
[2025-04-04 22:50:34] 2025-04-04 20:50:21,914 | INFO     | --- collectZombieJob: --- 10, [1600849]
[2025-04-04 22:50:34] 2025-04-04 20:50:21,915 | INFO     | zombie collector waiting for pid 1600849
[2025-04-04 22:50:34] 2025-04-04 20:50:21,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 22:50:34] 2025-04-04 20:50:21,915 | INFO     | collected zombie processes
[2025-04-04 22:50:34] 2025-04-04 20:50:21,915 | INFO     | will attempt to kill all subprocesses of pid=1600849
[2025-04-04 22:50:34] 2025-04-04 20:50:22,307 | INFO     | process IDs to be killed: [1600849] (in reverse order)
[2025-04-04 22:50:34] 2025-04-04 20:50:22,444 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 22:50:34] 2025-04-04 20:50:22,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 22:50:34] 2025-04-04 20:50:22,459 | INFO     | did not find any defunct processes belonging to 1600849
[2025-04-04 22:50:34] 2025-04-04 20:50:22,470 | INFO     | did not find any defunct processes belonging to 1600849
[2025-04-04 22:50:34] 2025-04-04 20:50:22,471 | INFO     | ready for new job
[2025-04-04 22:50:34] 2025-04-04 20:50:22,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 22:50:34] 2025-04-04 20:50:22,472 | INFO     | **************************************
[2025-04-04 22:50:34] 2025-04-04 20:50:22,473 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 22:50:34] 2025-04-04 20:50:22,473 | INFO     | **************************************
[2025-04-04 22:50:34] 2025-04-04 20:50:22,473 | INFO     | 
[2025-04-04 22:50:34] 2025-04-04 20:50:22,479 | INFO     | architecture information:
[2025-04-04 22:50:34] 2025-04-04 20:50:22,479 | INFO     | executing command: cat /etc/os-release
[2025-04-04 22:50:34] 2025-04-04 20:50:22,502 | INFO     | cat /etc/os-release:
[2025-04-04 22:50:34] NAME="CentOS Linux"
[2025-04-04 22:50:34] VERSION="7 (Core)"
[2025-04-04 22:50:34] ID="centos"
[2025-04-04 22:50:34] ID_LIKE="rhel fedora"
[2025-04-04 22:50:34] VERSION_ID="7"
[2025-04-04 22:50:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 22:50:34] ANSI_COLOR="0;31"
[2025-04-04 22:50:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 22:50:34] HOME_URL="https://www.centos.org/"
[2025-04-04 22:50:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 22:50:34] 
[2025-04-04 22:50:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 22:50:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 22:50:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 22:50:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 22:50:34] 
[2025-04-04 22:50:34] 2025-04-04 20:50:22,502 | INFO     | **************************************
[2025-04-04 22:50:34] 2025-04-04 20:50:23,005 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-04-04 22:50:34] 2025-04-04 20:50:23,030 | INFO     | sufficient remaining disk space (1682078433280 B)
[2025-04-04 22:50:34] 2025-04-04 20:50:23,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 22:50:34] 2025-04-04 20:50:23,031 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 22:50:34] 2025-04-04 20:50:23,031 | INFO     | update_server=False
[2025-04-04 22:50:34] 2025-04-04 20:50:23,031 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 22:50:34] 2025-04-04 20:50:23,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 22:50:34] 2025-04-04 20:50:23,223 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-04 22:50:34] 2025-04-04 20:50:23,223 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-04 22:50:34] 2025-04-04 20:50:23,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 22:50:34] 2025-04-04 20:50:23,223 | INFO     | will abort loop
[2025-04-04 22:50:34] 2025-04-04 20:50:23,561 | INFO     | all data control threads have been joined
[2025-04-04 22:50:34] 2025-04-04 20:50:23,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 22:50:34] 2025-04-04 20:50:23,737 | INFO     | all job control threads have been joined
[2025-04-04 22:50:34] 2025-04-04 20:50:23,906 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 22:50:34] 2025-04-04 20:50:23,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 22:50:34] 2025-04-04 20:50:23,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 22:50:34] 2025-04-04 20:50:24,036 | INFO     | [job] retrieve thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:24,062 | INFO     | all payload control threads have been joined
[2025-04-04 22:50:34] 2025-04-04 20:50:24,229 | INFO     | [job] job monitor thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:24,566 | INFO     | [data] control thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:24,742 | INFO     | [job] control thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:24,765 | INFO     | [job] validate thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:24,865 | INFO     | [data] copytool_in thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:24,956 | INFO     | [payload] validate_post thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:25,037 | INFO     | [data] copytool_out thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:25,068 | INFO     | [payload] control thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:25,135 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:25,435 | INFO     | [payload] failed_post thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:25,454 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:25,482 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:25,499 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:25,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 22:50:34] 2025-04-04 20:50:26,891 | INFO     | [job] queue monitor thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:27,620 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 22:50:34] 2025-04-04 20:50:29,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140696118056768)>', '<ExcThread(monitor, started 140695268484864)>']
[2025-04-04 22:50:34] 2025-04-04 20:50:29,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 22:50:34] 2025-04-04 20:50:29,940 | INFO     | [monitor] control thread has ended
[2025-04-04 22:50:34] 2025-04-04 20:50:34,545 | INFO     | all workflow threads have been joined
[2025-04-04 22:50:34] 2025-04-04 20:50:34,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 22:50:34] 2025-04-04 20:50:34,546 | INFO     | traces error code: 0
[2025-04-04 22:50:34] 2025-04-04 20:50:34,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 22:50:34] 2025-04-04 20:50:34,680 [wrapper] ==== pilot stdout END ====
[2025-04-04 22:50:34] 2025-04-04 20:50:34,685 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 22:50:34] 2025-04-04 20:50:34,689 [wrapper] pilotpid: 1579348
[2025-04-04 22:50:34] 2025-04-04 20:50:34,692 [wrapper] Pilot exit status: 0
[2025-04-04 22:50:34] 2025-04-04 20:50:34,707 [wrapper] pandaids: 6587176919
[2025-04-04 22:50:34] 2025-04-04 20:50:34,795 [wrapper] cleanup supervisor_pilot 2398103 1579349
[2025-04-04 22:50:34] 2025-04-04 20:50:34,798 [wrapper] Test setup, not cleaning
[2025-04-04 22:50:34] 2025-04-04 20:50:34,801 [wrapper] apfmon messages muted
[2025-04-04 22:50:34] 2025-04-04 20:50:34,803 [wrapper] ==== wrapper stdout END ====
[2025-04-04 22:50:34] 2025-04-04 20:50:34,806 [wrapper] ==== wrapper stderr END ====
[2025-04-04 22:50:34]  *** Error codes and diagnostics ***
[2025-04-04 22:50:34]     "exeErrorCode": 0,
[2025-04-04 22:50:34]     "exeErrorDiag": "",
[2025-04-04 22:50:34]     "pilotErrorCode": 0,
[2025-04-04 22:50:34]     "pilotErrorDiag": "",
[2025-04-04 22:50:34]  *** Listing of results directory ***
[2025-04-04 22:50:34] total 671052
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc    495897 Apr  4 06:10 pilot3.tar.gz
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc      5111 Apr  4 06:10 queuedata.json
[2025-04-04 22:50:34] -rwx------ 1 boinc boinc     37140 Apr  4 06:11 runpilot2-wrapper.sh
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc       100 Apr  4 21:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 22:50:34] -rwxr-xr-x 1 boinc boinc      7986 Apr  4 21:09 run_atlas
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc       105 Apr  4 21:09 job.xml
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc      6654 Apr  4 21:09 init_data.xml
[2025-04-04 22:50:34] -rw-r--r-- 2 boinc boinc 362744872 Apr  4 21:09 EVNT.43634896._000779.pool.root.1
[2025-04-04 22:50:34] -rw-r--r-- 2 boinc boinc     17569 Apr  4 21:09 start_atlas.sh
[2025-04-04 22:50:34] drwxrwx--x 2 boinc boinc      4096 Apr  4 21:09 shared
[2025-04-04 22:50:34] -rw-r--r-- 2 boinc boinc    508893 Apr  4 21:09 input.tar.gz
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc         0 Apr  4 21:09 boinc_lockfile
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc      2599 Apr  4 21:09 pandaJob.out
[2025-04-04 22:50:34] -rw------- 1 boinc boinc       424 Apr  4 21:09 setup.sh.local
[2025-04-04 22:50:34] -rw------- 1 boinc boinc    979987 Apr  4 21:10 agis_schedconf.cvmfs.json
[2025-04-04 22:50:34] -rw------- 1 boinc boinc   1603525 Apr  4 21:10 agis_ddmendpoints.agis.ALL.json
[2025-04-04 22:50:34] drwx------ 4 boinc boinc      4096 Apr  4 21:10 pilot3
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc       531 Apr  4 22:49 boinc_task_state.xml
[2025-04-04 22:50:34] -rw------- 1 boinc boinc 318667851 Apr  4 22:49 HITS.43634898._020445.pool.root.1
[2025-04-04 22:50:34] -rw------- 1 boinc boinc        95 Apr  4 22:49 pilot_heartbeat.json
[2025-04-04 22:50:34] -rw------- 1 boinc boinc      1022 Apr  4 22:50 memory_monitor_summary.json
[2025-04-04 22:50:34] -rw------- 1 boinc boinc    382576 Apr  4 22:50 log.43634898._020445.job.log.tgz.1
[2025-04-04 22:50:34] -rw------- 1 boinc boinc      7687 Apr  4 22:50 heartbeat.json
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc        27 Apr  4 22:50 wrapper_checkpoint.txt
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc      8192 Apr  4 22:50 boinc_mmap_file
[2025-04-04 22:50:34] -rw------- 1 boinc boinc      4542 Apr  4 22:50 pilotlog.txt
[2025-04-04 22:50:34] -rw------- 1 boinc boinc    567946 Apr  4 22:50 log.43634898._020445.job.log.1
[2025-04-04 22:50:34] -rw------- 1 boinc boinc       357 Apr  4 22:50 output.list
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc       620 Apr  4 22:50 runtime_log
[2025-04-04 22:50:34] -rw------- 1 boinc boinc    972800 Apr  4 22:50 result.tar.gz
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc     11078 Apr  4 22:50 runtime_log.err
[2025-04-04 22:50:34] -rw------- 1 boinc boinc       664 Apr  4 22:50 Q1vLDmXanK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCcILDmicTKOn.diag
[2025-04-04 22:50:34] -rw-r--r-- 1 boinc boinc     21755 Apr  4 22:50 stderr.txt
[2025-04-04 22:50:34] HITS file was successfully produced:
[2025-04-04 22:50:34] -rw------- 1 boinc boinc 318667851 Apr  4 22:49 shared/HITS.pool.root.1
[2025-04-04 22:50:34]  *** Contents of shared directory: ***
[2025-04-04 22:50:34] total 666924
[2025-04-04 22:50:34] -rw-r--r-- 2 boinc boinc 362744872 Apr  4 21:09 ATLAS.root_0
[2025-04-04 22:50:34] -rw-r--r-- 2 boinc boinc     17569 Apr  4 21:09 start_atlas.sh
[2025-04-04 22:50:34] -rw-r--r-- 2 boinc boinc    508893 Apr  4 21:09 input.tar.gz
[2025-04-04 22:50:34] -rw------- 1 boinc boinc 318667851 Apr  4 22:49 HITS.pool.root.1
[2025-04-04 22:50:34] -rw------- 1 boinc boinc    972800 Apr  4 22:50 result.tar.gz
22:50:36 (1572298): run_atlas exited; CPU time 58805.869136
22:50:36 (1572298): called boinc_finish(0)

</stderr_txt>
]]>

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