Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:33:47 (2918207): wrapper (7.7.26015): starting
08:33:47 (2918207): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 08:33:47] Arguments: --nthreads 8
[2025-04-04 08:33:47] Threads: 8
[2025-04-04 08:33:47] Checking for CVMFS
[2025-04-04 08:33:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 08:33:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 08:33:48] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 08:33:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 08:33:50] 2.12.6.0 1669502 56908 948164 144489 3 478 22798238 32935937 31814 130560 0 26334594 99.741 15092144 13016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 08:33:50] CVMFS is ok
[2025-04-04 08:33:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 08:33:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 08:33:50] Further information can be found at the LHC@home message board.
[2025-04-04 08:33:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 08:33:50] Checking for apptainer binary...
[2025-04-04 08:33:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 08:33:50] Running /usr/bin/apptainer --version
[2025-04-04 08:33:51] apptainer version 1.4.0-1.el9
[2025-04-04 08:33:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 08:33:51] lc-12-33.aglt2.org
[2025-04-04 08:33:51] apptainer works
[2025-04-04 08:33:51] Set ATHENA_PROC_NUMBER=8
[2025-04-04 08:33:51] Set ATHENA_CORE_NUMBER=8
[2025-04-04 08:33:52] Starting ATLAS job with PandaID=6586398919
[2025-04-04 08:33:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 16:20:46]  *** The last 200 lines of the pilot log: ***
[2025-04-04 16:20:46] 2025-04-04 20:20:30,293 | INFO     | mean y: 2105957.9977777777
[2025-04-04 16:20:46] 2025-04-04 20:20:30,293 | INFO     | -- intersect: -24298402594.13881
[2025-04-04 16:20:46] 2025-04-04 20:20:30,293 | INFO     | intersect: -24298402594.13881
[2025-04-04 16:20:46] 2025-04-04 20:20:30,294 | INFO     | chi2: 4.848856894726023
[2025-04-04 16:20:46] 2025-04-04 20:20:30,294 | INFO     | current chi2=4.848856894726023 (change=40.54156002744056 %)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,294 | INFO     | sum of square deviations: 27324335561.99114
[2025-04-04 16:20:46] 2025-04-04 20:20:30,299 | INFO     | sum of deviations: 313887523754.4924
[2025-04-04 16:20:46] 2025-04-04 20:20:30,300 | INFO     | mean x: 1743784447.1955056
[2025-04-04 16:20:46] 2025-04-04 20:20:30,300 | INFO     | mean y: 2119029.5460674157
[2025-04-04 16:20:46] 2025-04-04 20:20:30,300 | INFO     | -- intersect: -20029554964.86845
[2025-04-04 16:20:46] 2025-04-04 20:20:30,300 | INFO     | intersect: -20029554964.86845
[2025-04-04 16:20:46] 2025-04-04 20:20:30,301 | INFO     | chi2: 3.419774142132413
[2025-04-04 16:20:46] 2025-04-04 20:20:30,301 | INFO     | current chi2=3.419774142132413 (change=29.47257020820694 %)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,302 | INFO     | sum of square deviations: 26413584333.19111
[2025-04-04 16:20:46] 2025-04-04 20:20:30,307 | INFO     | sum of deviations: 239524806841.97263
[2025-04-04 16:20:46] 2025-04-04 20:20:30,307 | INFO     | mean x: 1743784599.6954546
[2025-04-04 16:20:46] 2025-04-04 20:20:30,307 | INFO     | mean y: 2131482.1863636365
[2025-04-04 16:20:46] 2025-04-04 20:20:30,307 | INFO     | -- intersect: -15810931377.715134
[2025-04-04 16:20:46] 2025-04-04 20:20:30,307 | INFO     | intersect: -15810931377.715134
[2025-04-04 16:20:46] 2025-04-04 20:20:30,308 | INFO     | chi2: 2.194437536759942
[2025-04-04 16:20:46] 2025-04-04 20:20:30,308 | INFO     | current chi2=2.194437536759942 (change=35.83092199791907 %)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,309 | INFO     | sum of square deviations: 25523324955.77928
[2025-04-04 16:20:46] 2025-04-04 20:20:30,314 | INFO     | sum of deviations: 180589014767.39996
[2025-04-04 16:20:46] 2025-04-04 20:20:30,314 | INFO     | mean x: 1743784752.1931036
[2025-04-04 16:20:46] 2025-04-04 20:20:30,314 | INFO     | mean y: 2141569.4
[2025-04-04 16:20:46] 2025-04-04 20:20:30,314 | INFO     | -- intersect: -12335920611.39209
[2025-04-04 16:20:46] 2025-04-04 20:20:30,315 | INFO     | intersect: -12335920611.39209
[2025-04-04 16:20:46] 2025-04-04 20:20:30,316 | INFO     | chi2: 1.4302420478035094
[2025-04-04 16:20:46] 2025-04-04 20:20:30,316 | INFO     | current chi2=1.4302420478035094 (change=34.8242078507624 %)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,316 | INFO     | sum of square deviations: 24653298759.863045
[2025-04-04 16:20:46] 2025-04-04 20:20:30,315 | INFO     | sufficient remaining disk space (75309776896 B)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,322 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,323 | INFO     | size of work directory /tmp/boinchome/slots/5/PanDA_Pilot-6586398919: 3670586 B (within 2537553920 B limit)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,323 | INFO     | pfn file=/tmp/boinchome/slots/5/PanDA_Pilot-6586398919/HITS.43634898._018827.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,323 | INFO     | total size of present files: 0 B (workdir size: 3670586 B)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,323 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/5/PanDA_Pilot-6586398919/HITS.43634898._018827.pool.root.1 since it does not exist
[2025-04-04 16:20:46] 2025-04-04 20:20:30,321 | INFO     | sum of deviations: 142590710536.98123
[2025-04-04 16:20:46] 2025-04-04 20:20:30,326 | INFO     | mean x: 1743784904.6906977
[2025-04-04 16:20:46] 2025-04-04 20:20:30,326 | INFO     | mean y: 2148218.1953488374
[2025-04-04 16:20:46] 2025-04-04 20:20:30,326 | INFO     | -- intersect: -10083622899.31209
[2025-04-04 16:20:46] 2025-04-04 20:20:30,326 | INFO     | intersect: -10083622899.31209
[2025-04-04 16:20:46] 2025-04-04 20:20:30,327 | INFO     | chi2: 1.1105576732931794
[2025-04-04 16:20:46] 2025-04-04 20:20:30,327 | INFO     | current chi2=1.1105576732931794 (change=22.35176731108447 %)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,327 | INFO     | left removable region: 50
[2025-04-04 16:20:46] 2025-04-04 20:20:30,327 | INFO     | sum of square deviations: 19696699853.0827
[2025-04-04 16:20:46] 2025-04-04 20:20:30,333 | INFO     | sum of deviations: 122021730336.51134
[2025-04-04 16:20:46] 2025-04-04 20:20:30,333 | INFO     | mean x: 1743785484.1654136
[2025-04-04 16:20:46] 2025-04-04 20:20:30,333 | INFO     | mean y: 2160973.022556391
[2025-04-04 16:20:46] 2025-04-04 20:20:30,333 | INFO     | -- intersect: -10800649837.959728
[2025-04-04 16:20:46] 2025-04-04 20:20:30,333 | INFO     | intersect: -10800649837.959728
[2025-04-04 16:20:46] 2025-04-04 20:20:30,334 | INFO     | chi2: 0.19973973442364476
[2025-04-04 16:20:46] 2025-04-04 20:20:30,334 | INFO     | -- intersect: -10800649837.959728
[2025-04-04 16:20:46] 2025-04-04 20:20:30,334 | INFO     | current memory leak: 6.20 B/s (using 399 data points, chi2=0.20)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,336 | INFO     | ..............................
[2025-04-04 16:20:46] 2025-04-04 20:20:30,336 | INFO     | . Timing measurements:
[2025-04-04 16:20:46] 2025-04-04 20:20:30,336 | INFO     | . get job = 0 s
[2025-04-04 16:20:46] 2025-04-04 20:20:30,336 | INFO     | . initial setup = 10 s
[2025-04-04 16:20:46] 2025-04-04 20:20:30,336 | INFO     | . payload setup = 51 s
[2025-04-04 16:20:46] 2025-04-04 20:20:30,336 | INFO     | . stage-in = 0 s
[2025-04-04 16:20:46] 2025-04-04 20:20:30,336 | INFO     | . payload execution = 27756 s
[2025-04-04 16:20:46] 2025-04-04 20:20:30,336 | INFO     | . stage-out = 2 s
[2025-04-04 16:20:46] 2025-04-04 20:20:30,337 | INFO     | . log creation = 0 s
[2025-04-04 16:20:46] 2025-04-04 20:20:30,337 | INFO     | ..............................
[2025-04-04 16:20:46] 2025-04-04 20:20:30,694 | INFO     | 
[2025-04-04 16:20:46] 2025-04-04 20:20:30,695 | INFO     | job summary report
[2025-04-04 16:20:46] 2025-04-04 20:20:30,696 | INFO     | --------------------------------------------------
[2025-04-04 16:20:46] 2025-04-04 20:20:30,697 | INFO     | PanDA job id: 6586398919
[2025-04-04 16:20:46] 2025-04-04 20:20:30,698 | INFO     | task id: 43634898
[2025-04-04 16:20:46] 2025-04-04 20:20:30,701 | INFO     | errors: (none)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 16:20:46] 2025-04-04 20:20:30,702 | INFO     | pilot state: finished 
[2025-04-04 16:20:46] 2025-04-04 20:20:30,702 | INFO     | transexitcode: 0
[2025-04-04 16:20:46] 2025-04-04 20:20:30,702 | INFO     | exeerrorcode: 0
[2025-04-04 16:20:46] 2025-04-04 20:20:30,702 | INFO     | exeerrordiag: 
[2025-04-04 16:20:46] 2025-04-04 20:20:30,702 | INFO     | exitcode: 0
[2025-04-04 16:20:46] 2025-04-04 20:20:30,702 | INFO     | exitmsg: OK
[2025-04-04 16:20:46] 2025-04-04 20:20:30,703 | INFO     | cpuconsumptiontime: 77585 s
[2025-04-04 16:20:46] 2025-04-04 20:20:30,703 | INFO     | nevents: 400
[2025-04-04 16:20:46] 2025-04-04 20:20:30,703 | INFO     | neventsw: 0
[2025-04-04 16:20:46] 2025-04-04 20:20:30,703 | INFO     | pid: 3021548
[2025-04-04 16:20:46] 2025-04-04 20:20:30,703 | INFO     | pgrp: 3021548
[2025-04-04 16:20:46] 2025-04-04 20:20:30,703 | INFO     | corecount: 8
[2025-04-04 16:20:46] 2025-04-04 20:20:30,703 | INFO     | event service: False
[2025-04-04 16:20:46] 2025-04-04 20:20:30,703 | INFO     | sizes: {0: 2416571, 1: 2417172, 2: 2417256, 3: 2417312, 4: 2417511, 16: 2417511, 27: 2417667, 39: 2417695, 47: 2417929, 50: 2417985, 27811: 2454032, 27814: 2462973
[2025-04-04 16:20:46] 2025-04-04 20:20:30,703 | INFO     | --------------------------------------------------
[2025-04-04 16:20:46] 2025-04-04 20:20:30,703 | INFO     | 
[2025-04-04 16:20:46] 2025-04-04 20:20:30,703 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-04-04 16:20:46] 2025-04-04 20:20:30,727 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,727 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,727 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,727 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,728 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 16:20:46] 2025-04-04 20:20:30,729 | INFO     | job 6586398919 has completed (purged errors)
[2025-04-04 16:20:46] 2025-04-04 20:20:30,729 | INFO     | overall cleanup function is called
[2025-04-04 16:20:46] 2025-04-04 20:20:31,033 | INFO     | number of running child processes to parent process 3021548: 1
[2025-04-04 16:20:46] 2025-04-04 20:20:31,033 | INFO     | maximum number of monitored processes: 6
[2025-04-04 16:20:46] 2025-04-04 20:20:31,033 | INFO     | aborting job monitoring since job object (job id=6586398919) has expired
[2025-04-04 16:20:46] 2025-04-04 20:20:31,738 | INFO     | --- collectZombieJob: --- 10, [3021548]
[2025-04-04 16:20:46] 2025-04-04 20:20:31,739 | INFO     | zombie collector waiting for pid 3021548
[2025-04-04 16:20:46] 2025-04-04 20:20:31,739 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 16:20:46] 2025-04-04 20:20:31,739 | INFO     | collected zombie processes
[2025-04-04 16:20:46] 2025-04-04 20:20:31,739 | INFO     | will attempt to kill all subprocesses of pid=3021548
[2025-04-04 16:20:46] 2025-04-04 20:20:32,301 | INFO     | process IDs to be killed: [3021548] (in reverse order)
[2025-04-04 16:20:46] 2025-04-04 20:20:32,492 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 16:20:46] 2025-04-04 20:20:32,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 16:20:46] 2025-04-04 20:20:32,518 | INFO     | did not find any defunct processes belonging to 3021548
[2025-04-04 16:20:46] 2025-04-04 20:20:32,543 | INFO     | did not find any defunct processes belonging to 3021548
[2025-04-04 16:20:46] 2025-04-04 20:20:32,544 | INFO     | ready for new job
[2025-04-04 16:20:46] 2025-04-04 20:20:32,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 16:20:46] 2025-04-04 20:20:32,547 | INFO     | **************************************
[2025-04-04 16:20:46] 2025-04-04 20:20:32,548 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 16:20:46] 2025-04-04 20:20:32,548 | INFO     | **************************************
[2025-04-04 16:20:46] 2025-04-04 20:20:32,548 | INFO     | 
[2025-04-04 16:20:46] 2025-04-04 20:20:32,565 | INFO     | architecture information:
[2025-04-04 16:20:46] 2025-04-04 20:20:32,566 | INFO     | executing command: cat /etc/os-release
[2025-04-04 16:20:46] 2025-04-04 20:20:32,584 | INFO     | cat /etc/os-release:
[2025-04-04 16:20:46] NAME="CentOS Linux"
[2025-04-04 16:20:46] VERSION="7 (Core)"
[2025-04-04 16:20:46] ID="centos"
[2025-04-04 16:20:46] ID_LIKE="rhel fedora"
[2025-04-04 16:20:46] VERSION_ID="7"
[2025-04-04 16:20:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 16:20:46] ANSI_COLOR="0;31"
[2025-04-04 16:20:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 16:20:46] HOME_URL="https://www.centos.org/"
[2025-04-04 16:20:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 16:20:46] 
[2025-04-04 16:20:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 16:20:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 16:20:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 16:20:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 16:20:46] 
[2025-04-04 16:20:46] 2025-04-04 20:20:32,585 | INFO     | **************************************
[2025-04-04 16:20:46] 2025-04-04 20:20:33,089 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-04-04 16:20:46] 2025-04-04 20:20:33,108 | INFO     | sufficient remaining disk space (75316068352 B)
[2025-04-04 16:20:46] 2025-04-04 20:20:33,109 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 16:20:46] 2025-04-04 20:20:33,109 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 16:20:46] 2025-04-04 20:20:33,109 | INFO     | update_server=False
[2025-04-04 16:20:46] 2025-04-04 20:20:33,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 16:20:46] 2025-04-04 20:20:33,110 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 16:20:46] 2025-04-04 20:20:33,514 | INFO     | all payload control threads have been joined
[2025-04-04 16:20:46] 2025-04-04 20:20:33,536 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-04 16:20:46] 2025-04-04 20:20:33,536 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-04 16:20:46] 2025-04-04 20:20:33,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 16:20:46] 2025-04-04 20:20:33,536 | INFO     | will abort loop
[2025-04-04 16:20:46] 2025-04-04 20:20:33,932 | INFO     | all data control threads have been joined
[2025-04-04 16:20:46] 2025-04-04 20:20:33,963 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 16:20:46] 2025-04-04 20:20:33,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 16:20:46] 2025-04-04 20:20:33,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 16:20:46] 2025-04-04 20:20:34,115 | INFO     | [job] retrieve thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:34,336 | INFO     | [payload] validate_post thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:34,394 | INFO     | [data] copytool_in thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:34,521 | INFO     | [payload] control thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:34,542 | INFO     | [job] job monitor thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:34,603 | INFO     | all job control threads have been joined
[2025-04-04 16:20:46] 2025-04-04 20:20:34,765 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:34,780 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:34,939 | INFO     | [data] control thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:35,118 | INFO     | [data] copytool_out thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:35,185 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:35,393 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:35,398 | INFO     | [payload] failed_post thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:35,477 | INFO     | [job] validate thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:35,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 16:20:46] 2025-04-04 20:20:35,611 | INFO     | [job] control thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:36,122 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 16:20:46] 2025-04-04 20:20:36,492 | INFO     | [job] queue monitor thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:40,132 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 16:20:46] 2025-04-04 20:20:41,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005422856000)>', '<ExcThread(monitor, started 140004625987328)>']
[2025-04-04 16:20:46] 2025-04-04 20:20:42,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 16:20:46] 2025-04-04 20:20:42,014 | INFO     | [monitor] control thread has ended
[2025-04-04 16:20:46] 2025-04-04 20:20:46,435 | INFO     | all workflow threads have been joined
[2025-04-04 16:20:46] 2025-04-04 20:20:46,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 16:20:46] 2025-04-04 20:20:46,438 | INFO     | traces error code: 0
[2025-04-04 16:20:46] 2025-04-04 20:20:46,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 16:20:46] 2025-04-04 20:20:46,657 [wrapper] ==== pilot stdout END ====
[2025-04-04 16:20:46] 2025-04-04 20:20:46,664 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 16:20:46] 2025-04-04 20:20:46,669 [wrapper] pilotpid: 2945682
[2025-04-04 16:20:46] 2025-04-04 20:20:46,671 [wrapper] Pilot exit status: 0
[2025-04-04 16:20:46] 2025-04-04 20:20:46,686 [wrapper] pandaids: 6586398919
[2025-04-04 16:20:46] 2025-04-04 20:20:46,792 [wrapper] cleanup supervisor_pilot 2648649 2945683
[2025-04-04 16:20:46] 2025-04-04 20:20:46,799 [wrapper] Test setup, not cleaning
[2025-04-04 16:20:46] 2025-04-04 20:20:46,804 [wrapper] apfmon messages muted
[2025-04-04 16:20:46] 2025-04-04 20:20:46,807 [wrapper] ==== wrapper stdout END ====
[2025-04-04 16:20:46] 2025-04-04 20:20:46,809 [wrapper] ==== wrapper stderr END ====
[2025-04-04 16:20:46]  *** Error codes and diagnostics ***
[2025-04-04 16:20:46]     "exeErrorCode": 0,
[2025-04-04 16:20:46]     "exeErrorDiag": "",
[2025-04-04 16:20:46]     "pilotErrorCode": 0,
[2025-04-04 16:20:46]     "pilotErrorDiag": "",
[2025-04-04 16:20:46]  *** Listing of results directory ***
[2025-04-04 16:20:46] total 672748
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 19:30 pilot3.tar.gz
[2025-04-04 16:20:46] -rwx------. 1 boincer umatlas     37140 Apr  3 19:41 runpilot2-wrapper.sh
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 19:41 queuedata.json
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas       100 Apr  4 08:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 16:20:46] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 08:33 run_atlas
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas       105 Apr  4 08:33 job.xml
[2025-04-04 16:20:46] -rw-r--r--. 2 boincer umatlas 358588249 Apr  4 08:33 EVNT.43634896._000698.pool.root.1
[2025-04-04 16:20:46] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 08:33 start_atlas.sh
[2025-04-04 16:20:46] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 08:33 shared
[2025-04-04 16:20:46] -rw-r--r--. 2 boincer umatlas    508882 Apr  4 08:33 input.tar.gz
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas         0 Apr  4 08:33 boinc_lockfile
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas      2599 Apr  4 08:33 pandaJob.out
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas       467 Apr  4 08:33 setup.sh.local
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas    979639 Apr  4 08:35 agis_schedconf.cvmfs.json
[2025-04-04 16:20:46] drwx------. 4 boincer umatlas      4096 Apr  4 08:35 pilot3
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas      6880 Apr  4 16:09 init_data.xml
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas 321469609 Apr  4 16:19 HITS.43634898._018827.pool.root.1
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas       532 Apr  4 16:19 boinc_task_state.xml
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas        95 Apr  4 16:20 pilot_heartbeat.json
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas      1045 Apr  4 16:20 memory_monitor_summary.json
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas   1603525 Apr  4 16:20 agis_ddmendpoints.agis.ALL.json
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas    497943 Apr  4 16:20 log.43634898._018827.job.log.tgz.1
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas      7727 Apr  4 16:20 heartbeat.json
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas        28 Apr  4 16:20 wrapper_checkpoint.txt
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas      4539 Apr  4 16:20 pilotlog.txt
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 16:20 boinc_mmap_file
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas   2002924 Apr  4 16:20 log.43634898._018827.job.log.1
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas       357 Apr  4 16:20 output.list
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas       620 Apr  4 16:20 runtime_log
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas   2519040 Apr  4 16:20 result.tar.gz
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas     11419 Apr  4 16:20 runtime_log.err
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas       658 Apr  4 16:20 9cVKDmcMjK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm4EILDmfN5ycm.diag
[2025-04-04 16:20:46] -rw-r--r--. 1 boincer umatlas     21363 Apr  4 16:20 stderr.txt
[2025-04-04 16:20:46] HITS file was successfully produced:
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas 321469609 Apr  4 16:19 shared/HITS.pool.root.1
[2025-04-04 16:20:46]  *** Contents of shared directory: ***
[2025-04-04 16:20:46] total 667108
[2025-04-04 16:20:46] -rw-r--r--. 2 boincer umatlas 358588249 Apr  4 08:33 ATLAS.root_0
[2025-04-04 16:20:46] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 08:33 start_atlas.sh
[2025-04-04 16:20:46] -rw-r--r--. 2 boincer umatlas    508882 Apr  4 08:33 input.tar.gz
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas 321469609 Apr  4 16:19 HITS.pool.root.1
[2025-04-04 16:20:46] -rw-------. 1 boincer umatlas   2519040 Apr  4 16:20 result.tar.gz
16:20:48 (2918207): run_atlas exited; CPU time 79342.650603
16:20:48 (2918207): called boinc_finish(0)

</stderr_txt>
]]>

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