Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:11:56 (3415870): wrapper (7.7.26015): starting
12:11:56 (3415870): wrapper: running run_atlas (--nthreads 9)
[2025-04-04 12:11:56] Arguments: --nthreads 9
[2025-04-04 12:11:56] Threads: 9
[2025-04-04 12:11:56] Checking for CVMFS
[2025-04-04 12:11:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 12:11:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 12:11:57] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 12:11:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 12:11:57] 2.12.6.0 1757211 55326 318996 144495 3 98 36014842 40960001 13120 130560 0 29785508 99.800 13752162 30864 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 12:11:57] CVMFS is ok
[2025-04-04 12:11:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 12:11:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 12:11:57] Further information can be found at the LHC@home message board.
[2025-04-04 12:11:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 12:11:57] Checking for apptainer binary...
[2025-04-04 12:11:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 12:11:57] Running /usr/bin/apptainer --version
[2025-04-04 12:11:57] apptainer version 1.4.0-1.el9
[2025-04-04 12:11:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 12:11:58] c6-8-12-2.aglt2.org
[2025-04-04 12:11:58] apptainer works
[2025-04-04 12:11:58] Set ATHENA_PROC_NUMBER=9
[2025-04-04 12:11:58] Set ATHENA_CORE_NUMBER=9
[2025-04-04 12:11:58] Starting ATLAS job with PandaID=6585399755
[2025-04-04 12:11:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 22:48:59]  *** The last 200 lines of the pilot log: ***
[2025-04-04 22:48:59] 2025-04-05 02:48:25,655 | INFO     | monitor loop #2385: job 0:6585399755 is in state 'finished'
[2025-04-04 22:48:59] 2025-04-05 02:48:25,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 22:48:59] 2025-04-05 02:48:28,221 | INFO     | monitor loop #2386: job 0:6585399755 is in state 'finished'
[2025-04-04 22:48:59] 2025-04-05 02:48:28,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 22:48:59] 2025-04-05 02:48:30,768 | INFO     | monitor loop #2387: job 0:6585399755 is in state 'finished'
[2025-04-04 22:48:59] 2025-04-05 02:48:30,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 22:48:59] 2025-04-05 02:48:33,292 | INFO     | monitor loop #2388: job 0:6585399755 is in state 'finished'
[2025-04-04 22:48:59] 2025-04-05 02:48:33,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 22:48:59] 2025-04-05 02:48:35,860 | INFO     | monitor loop #2389: job 0:6585399755 is in state 'finished'
[2025-04-04 22:48:59] 2025-04-05 02:48:35,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 22:48:59] 2025-04-05 02:48:38,366 | INFO     | monitor loop #2390: job 0:6585399755 is in state 'finished'
[2025-04-04 22:48:59] 2025-04-05 02:48:38,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 22:48:59] 2025-04-05 02:48:40,649 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-04 22:48:59] 2025-04-05 02:48:40,650 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6585399755/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 22:48:59] 2025-04-05 02:48:40,650 | INFO     | extracted standard info from prmon json
[2025-04-04 22:48:59] 2025-04-05 02:48:40,650 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 22:48:59] 2025-04-05 02:48:40,650 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 22:48:59] 2025-04-05 02:48:40,651 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 22:48:59] 2025-04-05 02:48:40,651 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 22:48:59] 2025-04-05 02:48:40,661 | INFO     | fitting pss+swap vs Time
[2025-04-04 22:48:59] 2025-04-05 02:48:40,662 | INFO     | sum of square deviations: 75703405276.52155
[2025-04-04 22:48:59] 2025-04-05 02:48:40,670 | INFO     | sum of deviations: 843914383756.5477
[2025-04-04 22:48:59] 2025-04-05 02:48:40,670 | INFO     | mean x: 1743802214.6112
[2025-04-04 22:48:59] 2025-04-05 02:48:40,670 | INFO     | mean y: 2349149.1216
[2025-04-04 22:48:59] 2025-04-05 02:48:40,670 | INFO     | -- intersect: -19436931897.23997
[2025-04-04 22:48:59] 2025-04-05 02:48:40,670 | INFO     | intersect: -19436931897.23997
[2025-04-04 22:48:59] 2025-04-05 02:48:40,671 | INFO     | chi2: 12.261145160867773
[2025-04-04 22:48:59] 2025-04-05 02:48:40,672 | INFO     | sum of square deviations: 73901125199.63899
[2025-04-04 22:48:59] 2025-04-05 02:48:40,680 | INFO     | sum of deviations: 993342786071.7747
[2025-04-04 22:48:59] 2025-04-05 02:48:40,680 | INFO     | mean x: 1743802062.116129
[2025-04-04 22:48:59] 2025-04-05 02:48:40,680 | INFO     | mean y: 2361773.0725806453
[2025-04-04 22:48:59] 2025-04-05 02:48:40,680 | INFO     | -- intersect: -23436972798.095802
[2025-04-04 22:48:59] 2025-04-05 02:48:40,680 | INFO     | intersect: -23436972798.095802
[2025-04-04 22:48:59] 2025-04-05 02:48:40,681 | INFO     | chi2: 9.394895661155955
[2025-04-04 22:48:59] 2025-04-05 02:48:40,681 | INFO     | current chi2=9.394895661155955 (change=23.376686778488168 %)
[2025-04-04 22:48:59] 2025-04-05 02:48:40,681 | INFO     | right removable region: 619
[2025-04-04 22:48:59] 2025-04-05 02:48:40,682 | INFO     | sum of square deviations: 73900892179.63902
[2025-04-04 22:48:59] 2025-04-05 02:48:40,690 | INFO     | sum of deviations: 675354895327.5933
[2025-04-04 22:48:59] 2025-04-05 02:48:40,690 | INFO     | mean x: 1743802367.116129
[2025-04-04 22:48:59] 2025-04-05 02:48:40,690 | INFO     | mean y: 2363402.3806451615
[2025-04-04 22:48:59] 2025-04-05 02:48:40,690 | INFO     | -- intersect: -15933648063.529575
[2025-04-04 22:48:59] 2025-04-05 02:48:40,690 | INFO     | intersect: -15933648063.529575
[2025-04-04 22:48:59] 2025-04-05 02:48:40,691 | INFO     | chi2: 9.315266596595256
[2025-04-04 22:48:59] 2025-04-05 02:48:40,691 | INFO     | current chi2=9.315266596595256 (change=24.026129090082684 %)
[2025-04-04 22:48:59] 2025-04-05 02:48:40,691 | INFO     | left removable region: 10
[2025-04-04 22:48:59] 2025-04-05 02:48:40,692 | INFO     | sum of square deviations: 70036824422.3874
[2025-04-04 22:48:59] 2025-04-05 02:48:40,699 | INFO     | sum of deviations: 692369546326.8676
[2025-04-04 22:48:59] 2025-04-05 02:48:40,700 | INFO     | mean x: 1743802336.6272578
[2025-04-04 22:48:59] 2025-04-05 02:48:40,700 | INFO     | mean y: 2387795.369458128
[2025-04-04 22:48:59] 2025-04-05 02:48:40,700 | INFO     | -- intersect: -17236481080.421726
[2025-04-04 22:48:59] 2025-04-05 02:48:40,700 | INFO     | intersect: -17236481080.421726
[2025-04-04 22:48:59] 2025-04-05 02:48:40,701 | INFO     | chi2: 4.746279848500549
[2025-04-04 22:48:59] 2025-04-05 02:48:40,701 | INFO     | -- intersect: -17236481080.421726
[2025-04-04 22:48:59] 2025-04-05 02:48:40,701 | INFO     | current memory leak: 9.89 B/s (using 609 data points, chi2=4.75)
[2025-04-04 22:48:59] 2025-04-05 02:48:40,702 | INFO     | ..............................
[2025-04-04 22:48:59] 2025-04-05 02:48:40,702 | INFO     | . Timing measurements:
[2025-04-04 22:48:59] 2025-04-05 02:48:40,702 | INFO     | . get job = 0 s
[2025-04-04 22:48:59] 2025-04-05 02:48:40,702 | INFO     | . initial setup = 4 s
[2025-04-04 22:48:59] 2025-04-05 02:48:40,703 | INFO     | . payload setup = 14 s
[2025-04-04 22:48:59] 2025-04-05 02:48:40,703 | INFO     | . stage-in = 0 s
[2025-04-04 22:48:59] 2025-04-05 02:48:40,703 | INFO     | . payload execution = 38107 s
[2025-04-04 22:48:59] 2025-04-05 02:48:40,703 | INFO     | . stage-out = 11 s
[2025-04-04 22:48:59] 2025-04-05 02:48:40,703 | INFO     | . log creation = 1 s
[2025-04-04 22:48:59] 2025-04-05 02:48:40,703 | INFO     | ..............................
[2025-04-04 22:48:59] 2025-04-05 02:48:41,315 | INFO     | 
[2025-04-04 22:48:59] 2025-04-05 02:48:41,319 | INFO     | job summary report
[2025-04-04 22:48:59] 2025-04-05 02:48:41,319 | INFO     | --------------------------------------------------
[2025-04-04 22:48:59] 2025-04-05 02:48:41,320 | INFO     | PanDA job id: 6585399755
[2025-04-04 22:48:59] 2025-04-05 02:48:41,320 | INFO     | task id: 43634898
[2025-04-04 22:48:59] 2025-04-05 02:48:41,320 | INFO     | errors: (none)
[2025-04-04 22:48:59] 2025-04-05 02:48:41,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 22:48:59] 2025-04-05 02:48:41,320 | INFO     | pilot state: finished 
[2025-04-04 22:48:59] 2025-04-05 02:48:41,320 | INFO     | transexitcode: 0
[2025-04-04 22:48:59] 2025-04-05 02:48:41,320 | INFO     | exeerrorcode: 0
[2025-04-04 22:48:59] 2025-04-05 02:48:41,320 | INFO     | exeerrordiag: 
[2025-04-04 22:48:59] 2025-04-05 02:48:41,320 | INFO     | exitcode: 0
[2025-04-04 22:48:59] 2025-04-05 02:48:41,321 | INFO     | exitmsg: OK
[2025-04-04 22:48:59] 2025-04-05 02:48:41,321 | INFO     | cpuconsumptiontime: 76491 s
[2025-04-04 22:48:59] 2025-04-05 02:48:41,321 | INFO     | nevents: 400
[2025-04-04 22:48:59] 2025-04-05 02:48:41,321 | INFO     | neventsw: 0
[2025-04-04 22:48:59] 2025-04-05 02:48:41,321 | INFO     | pid: 3427718
[2025-04-04 22:48:59] 2025-04-05 02:48:41,321 | INFO     | pgrp: 3427718
[2025-04-04 22:48:59] 2025-04-05 02:48:41,321 | INFO     | corecount: 9
[2025-04-04 22:48:59] 2025-04-05 02:48:41,321 | INFO     | event service: False
[2025-04-04 22:48:59] 2025-04-05 02:48:41,321 | INFO     | sizes: {0: 2417172, 1: 2417427, 8: 2417633, 12: 2417661, 38127: 2459088, 38129: 2459087, 38141: 2468212, 38143: 2468268, 38163: 2468438}
[2025-04-04 22:48:59] 2025-04-05 02:48:41,321 | INFO     | --------------------------------------------------
[2025-04-04 22:48:59] 2025-04-05 02:48:41,322 | INFO     | 
[2025-04-04 22:48:59] 2025-04-05 02:48:41,322 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-04 22:48:59] 2025-04-05 02:48:41,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 22:48:59] 2025-04-05 02:48:41,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,401 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 22:48:59] 2025-04-05 02:48:41,401 | INFO     | job 6585399755 has completed (purged errors)
[2025-04-04 22:48:59] 2025-04-05 02:48:41,401 | INFO     | overall cleanup function is called
[2025-04-04 22:48:59] 2025-04-05 02:48:42,463 | INFO     | --- collectZombieJob: --- 10, [3427718]
[2025-04-04 22:48:59] 2025-04-05 02:48:42,463 | INFO     | zombie collector waiting for pid 3427718
[2025-04-04 22:48:59] 2025-04-05 02:48:42,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 22:48:59] 2025-04-05 02:48:42,463 | INFO     | collected zombie processes
[2025-04-04 22:48:59] 2025-04-05 02:48:42,464 | INFO     | will attempt to kill all subprocesses of pid=3427718
[2025-04-04 22:48:59] 2025-04-05 02:48:44,967 | INFO     | process IDs to be killed: [3427718] (in reverse order)
[2025-04-04 22:48:59] 2025-04-05 02:48:45,166 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 22:48:59] 2025-04-05 02:48:45,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 22:48:59] 2025-04-05 02:48:45,192 | INFO     | did not find any defunct processes belonging to 3427718
[2025-04-04 22:48:59] 2025-04-05 02:48:45,223 | INFO     | did not find any defunct processes belonging to 3427718
[2025-04-04 22:48:59] 2025-04-05 02:48:45,223 | INFO     | ready for new job
[2025-04-04 22:48:59] 2025-04-05 02:48:45,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 22:48:59] 2025-04-05 02:48:45,226 | INFO     | **************************************
[2025-04-04 22:48:59] 2025-04-05 02:48:45,227 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 22:48:59] 2025-04-05 02:48:45,227 | INFO     | **************************************
[2025-04-04 22:48:59] 2025-04-05 02:48:45,227 | INFO     | 
[2025-04-04 22:48:59] 2025-04-05 02:48:45,242 | INFO     | architecture information:
[2025-04-04 22:48:59] 2025-04-05 02:48:45,243 | INFO     | executing command: cat /etc/os-release
[2025-04-04 22:48:59] 2025-04-05 02:48:45,261 | INFO     | cat /etc/os-release:
[2025-04-04 22:48:59] NAME="CentOS Linux"
[2025-04-04 22:48:59] VERSION="7 (Core)"
[2025-04-04 22:48:59] ID="centos"
[2025-04-04 22:48:59] ID_LIKE="rhel fedora"
[2025-04-04 22:48:59] VERSION_ID="7"
[2025-04-04 22:48:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 22:48:59] ANSI_COLOR="0;31"
[2025-04-04 22:48:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 22:48:59] HOME_URL="https://www.centos.org/"
[2025-04-04 22:48:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 22:48:59] 
[2025-04-04 22:48:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 22:48:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 22:48:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 22:48:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 22:48:59] 
[2025-04-04 22:48:59] 2025-04-05 02:48:45,261 | INFO     | **************************************
[2025-04-04 22:48:59] 2025-04-05 02:48:45,780 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-04 22:48:59] 2025-04-05 02:48:45,822 | INFO     | sufficient remaining disk space (54955868160 B)
[2025-04-04 22:48:59] 2025-04-05 02:48:45,822 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 22:48:59] 2025-04-05 02:48:45,823 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 22:48:59] 2025-04-05 02:48:45,823 | INFO     | update_server=False
[2025-04-04 22:48:59] 2025-04-05 02:48:45,823 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 22:48:59] 2025-04-05 02:48:45,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 22:48:59] 2025-04-05 02:48:45,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 22:48:59] 2025-04-05 02:48:46,094 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-04 22:48:59] 2025-04-05 02:48:46,094 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-04 22:48:59] 2025-04-05 02:48:46,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 22:48:59] 2025-04-05 02:48:46,095 | INFO     | will abort loop
[2025-04-04 22:48:59] 2025-04-05 02:48:46,095 | INFO     | all data control threads have been joined
[2025-04-04 22:48:59] 2025-04-05 02:48:46,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 22:48:59] 2025-04-05 02:48:46,401 | INFO     | all job control threads have been joined
[2025-04-04 22:48:59] 2025-04-05 02:48:46,401 | INFO     | all payload control threads have been joined
[2025-04-04 22:48:59] 2025-04-05 02:48:46,924 | INFO     | [job] retrieve thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,186 | INFO     | [job] queue monitor thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,203 | INFO     | [job] job monitor thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,204 | INFO     | [data] control thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,205 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,407 | INFO     | [job] control thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,408 | INFO     | [payload] control thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,482 | INFO     | [data] copytool_in thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,514 | INFO     | [payload] validate_post thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,684 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,691 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,816 | INFO     | PID=3419573 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-04 22:48:59] 2025-04-05 02:48:47,816 | INFO     | .. there are 9 such processes running
[2025-04-04 22:48:59] 2025-04-05 02:48:47,817 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 22:48:59] 2025-04-05 02:48:47,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 22:48:59] 2025-04-05 02:48:47,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 22:48:59] 2025-04-05 02:48:47,912 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,918 | INFO     | [data] copytool_out thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:47,951 | INFO     | [job] validate thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:48,023 | INFO     | [payload] failed_post thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:49,947 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 22:48:59] 2025-04-05 02:48:51,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140292603160384)>', '<ExcThread(monitor, started 140292246185728)>']
[2025-04-04 22:48:59] 2025-04-05 02:48:51,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 22:48:59] 2025-04-05 02:48:51,852 | INFO     | [monitor] control thread has ended
[2025-04-04 22:48:59] 2025-04-05 02:48:56,190 | INFO     | all workflow threads have been joined
[2025-04-04 22:48:59] 2025-04-05 02:48:56,190 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 22:48:59] 2025-04-05 02:48:56,191 | INFO     | traces error code: 0
[2025-04-04 22:48:59] 2025-04-05 02:48:56,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 22:48:59] 2025-04-05 02:48:58,618 [wrapper] ==== pilot stdout END ====
[2025-04-04 22:48:59] 2025-04-05 02:48:58,633 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 22:48:59] 2025-04-05 02:48:58,655 [wrapper] pilotpid: 3419573
[2025-04-04 22:48:59] 2025-04-05 02:48:58,658 [wrapper] Pilot exit status: 0
[2025-04-04 22:48:59] 2025-04-05 02:48:58,732 [wrapper] pandaids: 6585399755
[2025-04-04 22:48:59] 2025-04-05 02:48:59,394 [wrapper] cleanup supervisor_pilot  756799 3419574
[2025-04-04 22:48:59] 2025-04-05 02:48:59,429 [wrapper] Test setup, not cleaning
[2025-04-04 22:48:59] 2025-04-05 02:48:59,487 [wrapper] apfmon messages muted
[2025-04-04 22:48:59] 2025-04-05 02:48:59,492 [wrapper] ==== wrapper stdout END ====
[2025-04-04 22:48:59] 2025-04-05 02:48:59,495 [wrapper] ==== wrapper stderr END ====
[2025-04-04 22:48:59]  *** Error codes and diagnostics ***
[2025-04-04 22:48:59]     "exeErrorCode": 0,
[2025-04-04 22:48:59]     "exeErrorDiag": "",
[2025-04-04 22:48:59]     "pilotErrorCode": 0,
[2025-04-04 22:48:59]     "pilotErrorDiag": "",
[2025-04-04 22:48:59]  *** Listing of results directory ***
[2025-04-04 22:48:59] total 681424
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 09:40 pilot3.tar.gz
[2025-04-04 22:48:59] -rwx------. 1 boincer umatlas     37140 Apr  3 09:55 runpilot2-wrapper.sh
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 09:55 queuedata.json
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas       100 Apr  4 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 22:48:59] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 12:11 run_atlas
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas       105 Apr  4 12:11 job.xml
[2025-04-04 22:48:59] -rw-r--r--. 2 boincer umatlas 362828146 Apr  4 12:11 EVNT.43634896._000579.pool.root.1
[2025-04-04 22:48:59] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 12:11 shared
[2025-04-04 22:48:59] -rw-r--r--. 2 boincer umatlas    508891 Apr  4 12:11 input.tar.gz
[2025-04-04 22:48:59] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 12:11 start_atlas.sh
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas         0 Apr  4 12:11 boinc_lockfile
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas      2599 Apr  4 12:11 pandaJob.out
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas       467 Apr  4 12:11 setup.sh.local
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas    979669 Apr  4 12:12 agis_schedconf.cvmfs.json
[2025-04-04 22:48:59] drwx------. 4 boincer umatlas      4096 Apr  4 12:12 pilot3
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas      6841 Apr  4 22:39 init_data.xml
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas 323587861 Apr  4 22:43 HITS.43634898._015034.pool.root.1
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas       532 Apr  4 22:43 boinc_task_state.xml
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas      1050 Apr  4 22:47 memory_monitor_summary.json
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas   1603525 Apr  4 22:48 agis_ddmendpoints.agis.ALL.json
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas    617688 Apr  4 22:48 log.43634898._015034.job.log.tgz.1
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas        95 Apr  4 22:48 pilot_heartbeat.json
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas      7741 Apr  4 22:48 heartbeat.json
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 22:48 boinc_mmap_file
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas        28 Apr  4 22:48 wrapper_checkpoint.txt
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas      4933 Apr  4 22:48 pilotlog.txt
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas   3146633 Apr  4 22:48 log.43634898._015034.job.log.1
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas       357 Apr  4 22:48 output.list
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas       620 Apr  4 22:48 runtime_log
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas   3778560 Apr  4 22:48 result.tar.gz
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas     11424 Apr  4 22:48 runtime_log.err
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas       662 Apr  4 22:48 KX4NDm6DaK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmIOHLDmWxaxnm.diag
[2025-04-04 22:48:59] -rw-r--r--. 1 boincer umatlas     21491 Apr  4 22:48 stderr.txt
[2025-04-04 22:48:59] HITS file was successfully produced:
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas 323587861 Apr  4 22:43 shared/HITS.pool.root.1
[2025-04-04 22:48:59]  *** Contents of shared directory: ***
[2025-04-04 22:48:59] total 674548
[2025-04-04 22:48:59] -rw-r--r--. 2 boincer umatlas 362828146 Apr  4 12:11 ATLAS.root_0
[2025-04-04 22:48:59] -rw-r--r--. 2 boincer umatlas    508891 Apr  4 12:11 input.tar.gz
[2025-04-04 22:48:59] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 12:11 start_atlas.sh
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas 323587861 Apr  4 22:43 HITS.pool.root.1
[2025-04-04 22:48:59] -rw-------. 1 boincer umatlas   3778560 Apr  4 22:48 result.tar.gz
22:49:00 (3415870): run_atlas exited; CPU time 77502.524629
22:49:00 (3415870): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN