Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:01:20 (845990): wrapper (7.7.26015): starting
07:01:20 (845990): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 07:01:20] Arguments: --nthreads 8
[2025-04-04 07:01:20] Threads: 8
[2025-04-04 07:01:20] Checking for CVMFS
[2025-04-04 07:01:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 07:01:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 07:01:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 07:01:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 07:01:23] 2.12.6.0 2303914 11934 346860 144486 1 496 32411553 32935937 26722 130560 0 19230183 99.675 16405781 22659 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 07:01:23] CVMFS is ok
[2025-04-04 07:01:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 07:01:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 07:01:23] Further information can be found at the LHC@home message board.
[2025-04-04 07:01:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 07:01:23] Checking for apptainer binary...
[2025-04-04 07:01:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 07:01:23] Running /usr/bin/apptainer --version
[2025-04-04 07:01:23] apptainer version 1.4.0-1.el9
[2025-04-04 07:01:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 07:01:24] c6-2-11-1.aglt2.org
[2025-04-04 07:01:24] apptainer works
[2025-04-04 07:01:24] Set ATHENA_PROC_NUMBER=8
[2025-04-04 07:01:24] Set ATHENA_CORE_NUMBER=8
[2025-04-04 07:01:24] Starting ATLAS job with PandaID=6587583326
[2025-04-04 07:01:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 11:32:25]  *** The last 200 lines of the pilot log: ***
[2025-04-04 11:32:25] 2025-04-04 15:32:09,838 | INFO     | sum of deviations: 107000718031.20628
[2025-04-04 11:32:25] 2025-04-04 15:32:09,839 | INFO     | mean x: 1743772822.6381323
[2025-04-04 11:32:25] 2025-04-04 15:32:09,839 | INFO     | mean y: 2311945.346303502
[2025-04-04 11:32:25] 2025-04-04 15:32:09,839 | INFO     | -- intersect: -35447341715.063995
[2025-04-04 11:32:25] 2025-04-04 15:32:09,839 | INFO     | intersect: -35447341715.063995
[2025-04-04 11:32:25] 2025-04-04 15:32:09,839 | INFO     | chi2: 3.8958253557595017
[2025-04-04 11:32:25] 2025-04-04 15:32:09,839 | INFO     | current chi2=3.8958253557595017 (change=43.63350843350811 %)
[2025-04-04 11:32:25] 2025-04-04 15:32:09,840 | INFO     | sum of square deviations: 4962073367.567482
[2025-04-04 11:32:25] 2025-04-04 15:32:09,842 | INFO     | sum of deviations: 60777350805.05948
[2025-04-04 11:32:25] 2025-04-04 15:32:09,842 | INFO     | mean x: 1743772975.1468253
[2025-04-04 11:32:25] 2025-04-04 15:32:09,842 | INFO     | mean y: 2335324.511904762
[2025-04-04 11:32:25] 2025-04-04 15:32:09,842 | INFO     | -- intersect: -21356055409.407356
[2025-04-04 11:32:25] 2025-04-04 15:32:09,846 | INFO     | intersect: -21356055409.407356
[2025-04-04 11:32:25] 2025-04-04 15:32:09,847 | INFO     | chi2: 2.5124078057732273
[2025-04-04 11:32:25] 2025-04-04 15:32:09,847 | INFO     | current chi2=2.5124078057732273 (change=35.51025581629476 %)
[2025-04-04 11:32:25] 2025-04-04 15:32:09,847 | INFO     | sum of square deviations: 4672474035.433185
[2025-04-04 11:32:25] 2025-04-04 15:32:09,849 | INFO     | sum of deviations: 7326922309.35222
[2025-04-04 11:32:25] 2025-04-04 15:32:09,849 | INFO     | mean x: 1743773127.659919
[2025-04-04 11:32:25] 2025-04-04 15:32:09,849 | INFO     | mean y: 2363497.6113360324
[2025-04-04 11:32:25] 2025-04-04 15:32:09,849 | INFO     | -- intersect: -2732053030.8939633
[2025-04-04 11:32:25] 2025-04-04 15:32:09,849 | INFO     | intersect: -2732053030.8939633
[2025-04-04 11:32:25] 2025-04-04 15:32:09,850 | INFO     | chi2: 0.6315879679025915
[2025-04-04 11:32:25] 2025-04-04 15:32:09,850 | INFO     | current chi2=0.6315879679025915 (change=74.86124798485045 %)
[2025-04-04 11:32:25] 2025-04-04 15:32:09,854 | INFO     | sum of square deviations: 4394393547.388418
[2025-04-04 11:32:25] 2025-04-04 15:32:09,856 | INFO     | sum of deviations: -18635960799.867767
[2025-04-04 11:32:25] 2025-04-04 15:32:09,856 | INFO     | mean x: 1743773280.1652892
[2025-04-04 11:32:25] 2025-04-04 15:32:09,857 | INFO     | mean y: 2377712.896694215
[2025-04-04 11:32:25] 2025-04-04 15:32:09,857 | INFO     | -- intersect: 7397457407.643202
[2025-04-04 11:32:25] 2025-04-04 15:32:09,857 | INFO     | intersect: 7397457407.643202
[2025-04-04 11:32:25] 2025-04-04 15:32:09,857 | INFO     | chi2: 0.166179294714294
[2025-04-04 11:32:25] 2025-04-04 15:32:09,857 | INFO     | current chi2=0.166179294714294 (change=73.68865412902808 %)
[2025-04-04 11:32:25] 2025-04-04 15:32:09,858 | INFO     | sum of square deviations: 4127583358.666689
[2025-04-04 11:32:25] 2025-04-04 15:32:09,863 | INFO     | sum of deviations: -25637998493.99998
[2025-04-04 11:32:25] 2025-04-04 15:32:09,864 | INFO     | mean x: 1743773432.6666667
[2025-04-04 11:32:25] 2025-04-04 15:32:09,864 | INFO     | mean y: 2381673.8860759493
[2025-04-04 11:32:25] 2025-04-04 15:32:09,864 | INFO     | -- intersect: 10833625226.294086
[2025-04-04 11:32:25] 2025-04-04 15:32:09,864 | INFO     | intersect: 10833625226.294086
[2025-04-04 11:32:25] 2025-04-04 15:32:09,864 | INFO     | chi2: 0.0920454927219427
[2025-04-04 11:32:25] 2025-04-04 15:32:09,864 | INFO     | current chi2=0.0920454927219427 (change=44.61073331657041 %)
[2025-04-04 11:32:25] 2025-04-04 15:32:09,865 | INFO     | sum of square deviations: 3871797484.4439716
[2025-04-04 11:32:25] 2025-04-04 15:32:09,868 | INFO     | sum of deviations: -23847227262.41379
[2025-04-04 11:32:25] 2025-04-04 15:32:09,869 | INFO     | mean x: 1743773585.1681035
[2025-04-04 11:32:25] 2025-04-04 15:32:09,869 | INFO     | mean y: 2380601.2413793104
[2025-04-04 11:32:25] 2025-04-04 15:32:09,869 | INFO     | -- intersect: 10742654375.056728
[2025-04-04 11:32:25] 2025-04-04 15:32:09,869 | INFO     | intersect: 10742654375.056728
[2025-04-04 11:32:25] 2025-04-04 15:32:09,869 | INFO     | chi2: 0.09155633368203502
[2025-04-04 11:32:25] 2025-04-04 15:32:09,869 | INFO     | current chi2=0.09155633368203502 (change=0.5314318229414841 %)
[2025-04-04 11:32:25] 2025-04-04 15:32:09,869 | INFO     | left removable region: 60
[2025-04-04 11:32:25] 2025-04-04 15:32:09,870 | INFO     | sum of square deviations: 2334595865.4081635
[2025-04-04 11:32:25] 2025-04-04 15:32:09,871 | INFO     | sum of deviations: -1180920822.8061223
[2025-04-04 11:32:25] 2025-04-04 15:32:09,871 | INFO     | mean x: 1743774317.1530612
[2025-04-04 11:32:25] 2025-04-04 15:32:09,871 | INFO     | mean y: 2364440.2602040814
[2025-04-04 11:32:25] 2025-04-04 15:32:09,871 | INFO     | -- intersect: 884426912.7903485
[2025-04-04 11:32:25] 2025-04-04 15:32:09,871 | INFO     | intersect: 884426912.7903485
[2025-04-04 11:32:25] 2025-04-04 15:32:09,872 | INFO     | chi2: 0.04256726976333457
[2025-04-04 11:32:25] 2025-04-04 15:32:09,872 | INFO     | -- intersect: 884426912.7903485
[2025-04-04 11:32:25] 2025-04-04 15:32:09,876 | INFO     | current memory leak: -0.51 B/s (using 196 data points, chi2=0.04)
[2025-04-04 11:32:25] 2025-04-04 15:32:09,877 | INFO     | ..............................
[2025-04-04 11:32:25] 2025-04-04 15:32:09,877 | INFO     | . Timing measurements:
[2025-04-04 11:32:25] 2025-04-04 15:32:09,877 | INFO     | . get job = 0 s
[2025-04-04 11:32:25] 2025-04-04 15:32:09,877 | INFO     | . initial setup = 6 s
[2025-04-04 11:32:25] 2025-04-04 15:32:09,877 | INFO     | . payload setup = 42 s
[2025-04-04 11:32:25] 2025-04-04 15:32:09,877 | INFO     | . stage-in = 0 s
[2025-04-04 11:32:25] 2025-04-04 15:32:09,877 | INFO     | . payload execution = 16006 s
[2025-04-04 11:32:25] 2025-04-04 15:32:09,877 | INFO     | . stage-out = 6 s
[2025-04-04 11:32:25] 2025-04-04 15:32:09,877 | INFO     | . log creation = 0 s
[2025-04-04 11:32:25] 2025-04-04 15:32:09,878 | INFO     | ..............................
[2025-04-04 11:32:25] 2025-04-04 15:32:10,086 | INFO     | 
[2025-04-04 11:32:25] 2025-04-04 15:32:10,086 | INFO     | job summary report
[2025-04-04 11:32:25] 2025-04-04 15:32:10,086 | INFO     | --------------------------------------------------
[2025-04-04 11:32:25] 2025-04-04 15:32:10,086 | INFO     | PanDA job id: 6587583326
[2025-04-04 11:32:25] 2025-04-04 15:32:10,086 | INFO     | task id: 44004367
[2025-04-04 11:32:25] 2025-04-04 15:32:10,086 | INFO     | errors: (none)
[2025-04-04 11:32:25] 2025-04-04 15:32:10,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | pilot state: finished 
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | transexitcode: 0
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | exeerrorcode: 0
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | exeerrordiag: 
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | exitcode: 0
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | exitmsg: OK
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | cpuconsumptiontime: 44025 s
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | nevents: 400
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | neventsw: 0
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | pid: 870144
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | pgrp: 870144
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | corecount: 8
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | event service: False
[2025-04-04 11:32:25] 2025-04-04 15:32:10,087 | INFO     | sizes: {0: 2416449, 1: 2417134, 2: 2417333, 13: 2417333, 24: 2417389, 35: 2417751, 46: 2417779, 16053: 2448566, 16060: 2457507, 16063: 2457563, 16096: 2457733}
[2025-04-04 11:32:25] 2025-04-04 15:32:10,088 | INFO     | --------------------------------------------------
[2025-04-04 11:32:25] 2025-04-04 15:32:10,088 | INFO     | 
[2025-04-04 11:32:25] 2025-04-04 15:32:10,088 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-04 11:32:25] 2025-04-04 15:32:10,134 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,135 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,135 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 11:32:25] 2025-04-04 15:32:10,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 11:32:25] 2025-04-04 15:32:10,137 | INFO     | job 6587583326 has completed (purged errors)
[2025-04-04 11:32:25] 2025-04-04 15:32:10,137 | INFO     | overall cleanup function is called
[2025-04-04 11:32:25] 2025-04-04 15:32:11,150 | INFO     | --- collectZombieJob: --- 10, [870144]
[2025-04-04 11:32:25] 2025-04-04 15:32:11,150 | INFO     | zombie collector waiting for pid 870144
[2025-04-04 11:32:25] 2025-04-04 15:32:11,154 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 11:32:25] 2025-04-04 15:32:11,154 | INFO     | collected zombie processes
[2025-04-04 11:32:25] 2025-04-04 15:32:11,154 | INFO     | will attempt to kill all subprocesses of pid=870144
[2025-04-04 11:32:25] 2025-04-04 15:32:11,981 | INFO     | process IDs to be killed: [870144] (in reverse order)
[2025-04-04 11:32:25] 2025-04-04 15:32:12,188 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 11:32:25] 2025-04-04 15:32:12,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 11:32:25] 2025-04-04 15:32:12,319 | INFO     | did not find any defunct processes belonging to 870144
[2025-04-04 11:32:25] 2025-04-04 15:32:12,418 | INFO     | did not find any defunct processes belonging to 870144
[2025-04-04 11:32:25] 2025-04-04 15:32:12,419 | INFO     | ready for new job
[2025-04-04 11:32:25] 2025-04-04 15:32:12,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 11:32:25] 2025-04-04 15:32:12,421 | INFO     | **************************************
[2025-04-04 11:32:25] 2025-04-04 15:32:12,421 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 11:32:25] 2025-04-04 15:32:12,421 | INFO     | **************************************
[2025-04-04 11:32:25] 2025-04-04 15:32:12,421 | INFO     | 
[2025-04-04 11:32:25] 2025-04-04 15:32:12,426 | INFO     | architecture information:
[2025-04-04 11:32:25] 2025-04-04 15:32:12,426 | INFO     | executing command: cat /etc/os-release
[2025-04-04 11:32:25] 2025-04-04 15:32:12,446 | INFO     | cat /etc/os-release:
[2025-04-04 11:32:25] NAME="CentOS Linux"
[2025-04-04 11:32:25] VERSION="7 (Core)"
[2025-04-04 11:32:25] ID="centos"
[2025-04-04 11:32:25] ID_LIKE="rhel fedora"
[2025-04-04 11:32:25] VERSION_ID="7"
[2025-04-04 11:32:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 11:32:25] ANSI_COLOR="0;31"
[2025-04-04 11:32:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 11:32:25] HOME_URL="https://www.centos.org/"
[2025-04-04 11:32:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 11:32:25] 
[2025-04-04 11:32:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 11:32:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 11:32:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 11:32:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 11:32:25] 
[2025-04-04 11:32:25] 2025-04-04 15:32:12,447 | INFO     | **************************************
[2025-04-04 11:32:25] 2025-04-04 15:32:12,973 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-04 11:32:25] 2025-04-04 15:32:13,103 | INFO     | sufficient remaining disk space (93182754816 B)
[2025-04-04 11:32:25] 2025-04-04 15:32:13,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 11:32:25] 2025-04-04 15:32:13,103 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 11:32:25] 2025-04-04 15:32:13,103 | INFO     | update_server=False
[2025-04-04 11:32:25] 2025-04-04 15:32:13,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 11:32:25] 2025-04-04 15:32:13,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 11:32:25] 2025-04-04 15:32:13,105 | INFO     | aborting loop
[2025-04-04 11:32:25] 2025-04-04 15:32:13,502 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 11:32:25] 2025-04-04 15:32:13,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 11:32:25] 2025-04-04 15:32:13,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 11:32:25] 2025-04-04 15:32:13,623 | INFO     | all data control threads have been joined
[2025-04-04 11:32:25] 2025-04-04 15:32:14,111 | INFO     | [job] job monitor thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:14,116 | INFO     | [job] retrieve thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:14,237 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:14,244 | INFO     | all payload control threads have been joined
[2025-04-04 11:32:25] 2025-04-04 15:32:14,281 | INFO     | [payload] validate_post thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:14,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 11:32:25] 2025-04-04 15:32:14,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 11:32:25] 2025-04-04 15:32:14,482 | INFO     | all job control threads have been joined
[2025-04-04 11:32:25] 2025-04-04 15:32:14,629 | INFO     | [data] control thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:14,645 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:14,646 | INFO     | [job] validate thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:14,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:14,651 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:14,652 | INFO     | [data] copytool_in thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:15,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 11:32:25] 2025-04-04 15:32:15,250 | INFO     | [payload] control thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:15,452 | INFO     | [payload] failed_post thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:15,488 | INFO     | [job] control thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:16,105 | INFO     | [job] queue monitor thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:16,300 | INFO     | [data] copytool_out thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:18,456 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 11:32:25] 2025-04-04 15:32:18,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140506807551808)>', '<ExcThread(monitor, started 140506449286912)>']
[2025-04-04 11:32:25] 2025-04-04 15:32:18,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 11:32:25] 2025-04-04 15:32:18,536 | INFO     | [monitor] control thread has ended
[2025-04-04 11:32:25] 2025-04-04 15:32:22,412 [wrapper] supervise_pilot (15 min periods counter: 19)
[2025-04-04 11:32:25] 2025-04-04 15:32:23,550 | INFO     | all workflow threads have been joined
[2025-04-04 11:32:25] 2025-04-04 15:32:23,550 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 11:32:25] 2025-04-04 15:32:23,551 | INFO     | traces error code: 0
[2025-04-04 11:32:25] 2025-04-04 15:32:23,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 11:32:25] 2025-04-04 15:32:23,991 [wrapper] ==== pilot stdout END ====
[2025-04-04 11:32:25] 2025-04-04 15:32:24,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 11:32:25] 2025-04-04 15:32:24,020 [wrapper] pilotpid: 858246
[2025-04-04 11:32:25] 2025-04-04 15:32:24,055 [wrapper] Pilot exit status: 0
[2025-04-04 11:32:25] 2025-04-04 15:32:24,179 [wrapper] pandaids: 6587583326
[2025-04-04 11:32:25] 2025-04-04 15:32:24,553 [wrapper] cleanup supervisor_pilot 2582966 858247
[2025-04-04 11:32:25] 2025-04-04 15:32:24,557 [wrapper] Test setup, not cleaning
[2025-04-04 11:32:25] 2025-04-04 15:32:24,560 [wrapper] apfmon messages muted
[2025-04-04 11:32:25] 2025-04-04 15:32:24,562 [wrapper] ==== wrapper stdout END ====
[2025-04-04 11:32:25] 2025-04-04 15:32:24,564 [wrapper] ==== wrapper stderr END ====
[2025-04-04 11:32:25]  *** Error codes and diagnostics ***
[2025-04-04 11:32:25]     "exeErrorCode": 0,
[2025-04-04 11:32:25]     "exeErrorDiag": "",
[2025-04-04 11:32:25]     "pilotErrorCode": 0,
[2025-04-04 11:32:25]     "pilotErrorDiag": "",
[2025-04-04 11:32:25]  *** Listing of results directory ***
[2025-04-04 11:32:25] total 411136
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas    495897 Apr  4 01:45 pilot3.tar.gz
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas      5111 Apr  4 02:10 queuedata.json
[2025-04-04 11:32:25] -rwx------. 1 boincer umatlas     37140 Apr  4 02:11 runpilot2-wrapper.sh
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas       100 Apr  4 07:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 11:32:25] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 07:01 run_atlas
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas       105 Apr  4 07:01 job.xml
[2025-04-04 11:32:25] -rw-r--r--. 2 boincer umatlas 220680246 Apr  4 07:01 EVNT.44004365._000417.pool.root.1
[2025-04-04 11:32:25] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 07:01 start_atlas.sh
[2025-04-04 11:32:25] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 07:01 shared
[2025-04-04 11:32:25] -rw-r--r--. 2 boincer umatlas    508885 Apr  4 07:01 input.tar.gz
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas         0 Apr  4 07:01 boinc_lockfile
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas      2551 Apr  4 07:01 pandaJob.out
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas       467 Apr  4 07:01 setup.sh.local
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas    979666 Apr  4 07:02 agis_schedconf.cvmfs.json
[2025-04-04 11:32:25] drwx------. 4 boincer umatlas      4096 Apr  4 07:02 pilot3
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas      6857 Apr  4 11:29 init_data.xml
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas 193079062 Apr  4 11:30 HITS.44004367._011320.pool.root.1
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas       531 Apr  4 11:30 boinc_task_state.xml
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas      1065 Apr  4 11:31 memory_monitor_summary.json
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas   1603525 Apr  4 11:31 agis_ddmendpoints.agis.ALL.json
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas    413543 Apr  4 11:31 log.44004367._011320.job.log.tgz.1
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas        95 Apr  4 11:31 pilot_heartbeat.json
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas      7743 Apr  4 11:32 heartbeat.json
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas        28 Apr  4 11:32 wrapper_checkpoint.txt
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 11:32 boinc_mmap_file
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas      4353 Apr  4 11:32 pilotlog.txt
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas   1287443 Apr  4 11:32 log.44004367._011320.job.log.1
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas       357 Apr  4 11:32 output.list
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas       620 Apr  4 11:32 runtime_log
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas   1720320 Apr  4 11:32 result.tar.gz
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas     11424 Apr  4 11:32 runtime_log.err
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas       659 Apr  4 11:32 hQZNDmvRpK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmBmILDmwOTp3n.diag
[2025-04-04 11:32:25] -rw-r--r--. 1 boincer umatlas     20871 Apr  4 11:32 stderr.txt
[2025-04-04 11:32:25] HITS file was successfully produced:
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas 193079062 Apr  4 11:30 shared/HITS.pool.root.1
[2025-04-04 11:32:25]  *** Contents of shared directory: ***
[2025-04-04 11:32:25] total 406276
[2025-04-04 11:32:25] -rw-r--r--. 2 boincer umatlas 220680246 Apr  4 07:01 ATLAS.root_0
[2025-04-04 11:32:25] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 07:01 start_atlas.sh
[2025-04-04 11:32:25] -rw-r--r--. 2 boincer umatlas    508885 Apr  4 07:01 input.tar.gz
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas 193079062 Apr  4 11:30 HITS.pool.root.1
[2025-04-04 11:32:25] -rw-------. 1 boincer umatlas   1720320 Apr  4 11:32 result.tar.gz
11:32:27 (845990): run_atlas exited; CPU time 44764.073539
11:32:27 (845990): called boinc_finish(0)

</stderr_txt>
]]>

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