Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:12:53 (3235116): wrapper (7.7.26015): starting
22:12:53 (3235116): wrapper: running run_atlas (--nthreads 6)
[2025-04-04 22:12:53] Arguments: --nthreads 6
[2025-04-04 22:12:53] Threads: 6
[2025-04-04 22:12:53] Checking for CVMFS
[2025-04-04 22:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 22:12:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 22:12:53] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 22:12:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 22:12:53] 2.11.5.0 2777923 5562 73964 144489 3 56 45363451 52428800 1858 130560 0 15425315 99.997 1406140 69 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-04-04 22:12:53] CVMFS is ok
[2025-04-04 22:12:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 22:12:53] Checking for apptainer binary...
[2025-04-04 22:12:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 22:12:53] Running /usr/bin/apptainer --version
[2025-04-04 22:12:53] apptainer version 1.3.5-1.el9
[2025-04-04 22:12:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 22:12:54] testio008
[2025-04-04 22:12:54] apptainer works
[2025-04-04 22:12:54] Set ATHENA_PROC_NUMBER=6
[2025-04-04 22:12:54] Set ATHENA_CORE_NUMBER=6
[2025-04-04 22:12:54] Starting ATLAS job with PandaID=6584895814
[2025-04-04 22:12:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 23:24:48]  *** The last 200 lines of the pilot log: ***
[2025-04-04 23:24:48] 2025-04-04 14:23:47,574 | INFO     | monitor loop #323: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:23:47,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:23:50,076 | INFO     | monitor loop #324: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:23:50,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:23:50,860 | INFO     | PID=3238844 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-04 23:24:48] 2025-04-04 14:23:50,860 | INFO     | .. there are 3 such processes running
[2025-04-04 23:24:48] 2025-04-04 14:23:52,578 | INFO     | monitor loop #325: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:23:52,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:23:55,081 | INFO     | monitor loop #326: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:23:55,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:23:57,584 | INFO     | monitor loop #327: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:23:57,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:00,086 | INFO     | monitor loop #328: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:00,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:02,589 | INFO     | monitor loop #329: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:02,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:05,092 | INFO     | monitor loop #330: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:05,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:07,595 | INFO     | monitor loop #331: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:07,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:10,098 | INFO     | monitor loop #332: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:10,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:12,601 | INFO     | monitor loop #333: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:12,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:12,964 | INFO     | PID=3238844 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-04 23:24:48] 2025-04-04 14:24:12,964 | INFO     | .. there are 3 such processes running
[2025-04-04 23:24:48] 2025-04-04 14:24:15,103 | INFO     | monitor loop #334: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:15,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:17,605 | INFO     | monitor loop #335: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:17,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:20,107 | INFO     | monitor loop #336: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:20,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:22,609 | INFO     | monitor loop #337: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:22,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:25,112 | INFO     | monitor loop #338: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:25,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:27,613 | INFO     | monitor loop #339: job 0:6584895814 is in state 'finished'
[2025-04-04 23:24:48] 2025-04-04 14:24:27,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 23:24:48] 2025-04-04 14:24:28,374 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-04 23:24:48] 2025-04-04 14:24:28,374 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6584895814/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 23:24:48] 2025-04-04 14:24:28,374 | INFO     | extracted standard info from prmon json
[2025-04-04 23:24:48] 2025-04-04 14:24:28,374 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 23:24:48] 2025-04-04 14:24:28,374 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 23:24:48] 2025-04-04 14:24:28,374 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 23:24:48] 2025-04-04 14:24:28,374 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 23:24:48] 2025-04-04 14:24:28,375 | INFO     | fitting pss+swap vs Time
[2025-04-04 23:24:48] 2025-04-04 14:24:28,375 | INFO     | sum of square deviations: 73882315.5
[2025-04-04 23:24:48] 2025-04-04 14:24:28,375 | INFO     | sum of deviations: 20578302328.499992
[2025-04-04 23:24:48] 2025-04-04 14:24:28,375 | INFO     | mean x: 1743774563.5
[2025-04-04 23:24:48] 2025-04-04 14:24:28,375 | INFO     | mean y: 2289938.629032258
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | -- intersect: -485687958365.1225
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | intersect: -485687958365.1225
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | chi2: 2.4029448260891075
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | -- intersect: -485687958365.1225
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | current memory leak: 278.53 B/s (using 62 data points, chi2=2.40)
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | ..............................
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | . Timing measurements:
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | . get job = 0 s
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | . initial setup = 5 s
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | . payload setup = 2 s
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | . stage-in = 0 s
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | . payload execution = 4184 s
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | . stage-out = 0 s
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | . log creation = 0 s
[2025-04-04 23:24:48] 2025-04-04 14:24:28,376 | INFO     | ..............................
[2025-04-04 23:24:48] 2025-04-04 14:24:28,419 | INFO     | 
[2025-04-04 23:24:48] 2025-04-04 14:24:28,419 | INFO     | job summary report
[2025-04-04 23:24:48] 2025-04-04 14:24:28,419 | INFO     | --------------------------------------------------
[2025-04-04 23:24:48] 2025-04-04 14:24:28,419 | INFO     | PanDA job id: 6584895814
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | task id: 44004367
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | errors: (none)
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | pilot state: finished 
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | transexitcode: 0
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | exeerrorcode: 0
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | exeerrordiag: 
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | exitcode: 0
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | exitmsg: OK
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | cpuconsumptiontime: 19657 s
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | nevents: 400
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | neventsw: 0
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | pid: 3245492
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | pgrp: 3245492
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | corecount: 6
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | event service: False
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | sizes: {0: 2417321, 2: 2417527, 11: 2417555, 4190: 2443380, 4191: 2452377, 4274: 2452491}
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | --------------------------------------------------
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | 
[2025-04-04 23:24:48] 2025-04-04 14:24:28,420 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,429 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 23:24:48] 2025-04-04 14:24:28,430 | INFO     | job 6584895814 has completed (purged errors)
[2025-04-04 23:24:48] 2025-04-04 14:24:28,430 | INFO     | overall cleanup function is called
[2025-04-04 23:24:48] 2025-04-04 14:24:29,436 | INFO     | --- collectZombieJob: --- 10, [3245492]
[2025-04-04 23:24:48] 2025-04-04 14:24:29,436 | INFO     | zombie collector waiting for pid 3245492
[2025-04-04 23:24:48] 2025-04-04 14:24:29,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 23:24:48] 2025-04-04 14:24:29,436 | INFO     | collected zombie processes
[2025-04-04 23:24:48] 2025-04-04 14:24:29,436 | INFO     | will attempt to kill all subprocesses of pid=3245492
[2025-04-04 23:24:48] 2025-04-04 14:24:29,476 | INFO     | process IDs to be killed: [3245492] (in reverse order)
[2025-04-04 23:24:48] 2025-04-04 14:24:29,496 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 23:24:48] 2025-04-04 14:24:29,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 23:24:48] 2025-04-04 14:24:29,498 | INFO     | did not find any defunct processes belonging to 3245492
[2025-04-04 23:24:48] 2025-04-04 14:24:29,500 | INFO     | did not find any defunct processes belonging to 3245492
[2025-04-04 23:24:48] 2025-04-04 14:24:29,500 | INFO     | ready for new job
[2025-04-04 23:24:48] 2025-04-04 14:24:29,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 23:24:48] 2025-04-04 14:24:29,501 | INFO     | ***************************************
[2025-04-04 23:24:48] 2025-04-04 14:24:29,501 | INFO     | ***  PanDA Pilot version 3.10.1.14  ***
[2025-04-04 23:24:48] 2025-04-04 14:24:29,501 | INFO     | ***************************************
[2025-04-04 23:24:48] 2025-04-04 14:24:29,501 | INFO     | 
[2025-04-04 23:24:48] 2025-04-04 14:24:29,502 | INFO     | architecture information:
[2025-04-04 23:24:48] 2025-04-04 14:24:29,502 | INFO     | executing command: cat /etc/os-release
[2025-04-04 23:24:48] 2025-04-04 14:24:29,508 | INFO     | cat /etc/os-release:
[2025-04-04 23:24:48] NAME="CentOS Linux"
[2025-04-04 23:24:48] VERSION="7 (Core)"
[2025-04-04 23:24:48] ID="centos"
[2025-04-04 23:24:48] ID_LIKE="rhel fedora"
[2025-04-04 23:24:48] VERSION_ID="7"
[2025-04-04 23:24:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 23:24:48] ANSI_COLOR="0;31"
[2025-04-04 23:24:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 23:24:48] HOME_URL="https://www.centos.org/"
[2025-04-04 23:24:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 23:24:48] 
[2025-04-04 23:24:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 23:24:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 23:24:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 23:24:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 23:24:48] 
[2025-04-04 23:24:48] 2025-04-04 14:24:29,508 | INFO     | ***************************************
[2025-04-04 23:24:48] 2025-04-04 14:24:30,011 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-04-04 23:24:48] 2025-04-04 14:24:30,018 | INFO     | sufficient remaining disk space (268737445888 B)
[2025-04-04 23:24:48] 2025-04-04 14:24:30,018 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 23:24:48] 2025-04-04 14:24:30,018 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 23:24:48] 2025-04-04 14:24:30,018 | INFO     | update_server=False
[2025-04-04 23:24:48] 2025-04-04 14:24:30,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 23:24:48] 2025-04-04 14:24:30,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 23:24:48] 2025-04-04 14:24:30,115 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-04 23:24:48] 2025-04-04 14:24:30,115 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-04 23:24:48] 2025-04-04 14:24:30,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 23:24:48] 2025-04-04 14:24:30,115 | INFO     | will abort loop
[2025-04-04 23:24:48] 2025-04-04 14:24:30,508 | INFO     | all data control threads have been joined
[2025-04-04 23:24:48] 2025-04-04 14:24:30,574 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 23:24:48] 2025-04-04 14:24:30,595 | INFO     | all payload control threads have been joined
[2025-04-04 23:24:48] 2025-04-04 14:24:31,011 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 23:24:48] 2025-04-04 14:24:31,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 23:24:48] 2025-04-04 14:24:31,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 23:24:48] 2025-04-04 14:24:31,023 | INFO     | [job] queue monitor thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:31,023 | INFO     | [job] retrieve thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:31,121 | INFO     | [job] job monitor thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:31,513 | INFO     | [data] control thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:31,600 | INFO     | [payload] control thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:31,680 | INFO     | all job control threads have been joined
[2025-04-04 23:24:48] 2025-04-04 14:24:31,836 | INFO     | [payload] validate_post thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:32,097 | INFO     | [job] validate thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:32,171 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:32,255 | INFO     | [data] copytool_in thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:32,255 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:32,339 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:32,372 | INFO     | [payload] failed_post thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:32,422 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 23:24:48] 2025-04-04 14:24:32,579 | INFO     | [data] copytool_out thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:32,685 | INFO     | [job] control thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:36,427 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:40,815 | INFO     | job.realtimelogging is not enabled
[2025-04-04 23:24:48] 2025-04-04 14:24:41,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 23:24:48] 2025-04-04 14:24:43,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140675914458944)>', '<ExcThread(monitor, started 140675077109504)>']
[2025-04-04 23:24:48] 2025-04-04 14:24:44,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 23:24:48] 2025-04-04 14:24:44,072 | INFO     | [monitor] control thread has ended
[2025-04-04 23:24:48] 2025-04-04 14:24:48,389 | INFO     | all workflow threads have been joined
[2025-04-04 23:24:48] 2025-04-04 14:24:48,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 23:24:48] 2025-04-04 14:24:48,389 | INFO     | traces error code: 0
[2025-04-04 23:24:48] 2025-04-04 14:24:48,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 23:24:48] 2025-04-04 14:24:48,444 [wrapper] ==== pilot stdout END ====
[2025-04-04 23:24:48] 2025-04-04 14:24:48,445 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 23:24:48] 2025-04-04 14:24:48,446 [wrapper] pilotpid: 3238844
[2025-04-04 23:24:48] 2025-04-04 14:24:48,447 [wrapper] Pilot exit status: 0
[2025-04-04 23:24:48] 2025-04-04 14:24:48,451 [wrapper] pandaids: 6584895814
[2025-04-04 23:24:48] 2025-04-04 14:24:48,463 [wrapper] cleanup supervisor_pilot 3301647 3238845
[2025-04-04 23:24:48] 2025-04-04 14:24:48,464 [wrapper] Test setup, not cleaning
[2025-04-04 23:24:48] 2025-04-04 14:24:48,465 [wrapper] apfmon messages muted
[2025-04-04 23:24:48] 2025-04-04 14:24:48,466 [wrapper] ==== wrapper stdout END ====
[2025-04-04 23:24:48] 2025-04-04 14:24:48,467 [wrapper] ==== wrapper stderr END ====
[2025-04-04 23:24:48]  *** Error codes and diagnostics ***
[2025-04-04 23:24:48]     "exeErrorCode": 0,
[2025-04-04 23:24:48]     "exeErrorDiag": "",
[2025-04-04 23:24:48]     "pilotErrorCode": 0,
[2025-04-04 23:24:48]     "pilotErrorDiag": "",
[2025-04-04 23:24:48]  *** Listing of results directory ***
[2025-04-04 23:24:48] total 411024
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc    516735 Mar 31 19:50 pilot3.tar.gz
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc      5112 Apr  3 06:24 queuedata.json
[2025-04-04 23:24:48] -rwx------. 1 boinc boinc     37140 Apr  3 06:25 runpilot2-wrapper.sh
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc       100 Apr  4 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 23:24:48] -rwxr-xr-x. 1 boinc boinc      7986 Apr  4 22:12 run_atlas
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc       105 Apr  4 22:12 job.xml
[2025-04-04 23:24:48] -rw-r--r--. 2 boinc boinc 220729948 Apr  4 22:12 EVNT.44004365._000169.pool.root.1
[2025-04-04 23:24:48] -rw-r--r--. 2 boinc boinc     17571 Apr  4 22:12 start_atlas.sh
[2025-04-04 23:24:48] drwxrwx--x. 2 boinc boinc        68 Apr  4 22:12 shared
[2025-04-04 23:24:48] -rw-r--r--. 2 boinc boinc    530806 Apr  4 22:12 input.tar.gz
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc      9509 Apr  4 22:12 init_data.xml
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc         0 Apr  4 22:12 boinc_lockfile
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc      2547 Apr  4 22:12 pandaJob.out
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc       424 Apr  4 22:12 setup.sh.local
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc    979639 Apr  4 22:12 agis_schedconf.cvmfs.json
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc   1603525 Apr  4 22:13 agis_ddmendpoints.agis.ALL.json
[2025-04-04 23:24:48] drwx------. 6 boinc boinc      4096 Apr  4 22:13 pilot3
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc 194873284 Apr  4 23:22 HITS.44004367._004220.pool.root.1
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc       529 Apr  4 23:22 boinc_task_state.xml
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc      1018 Apr  4 23:23 memory_monitor_summary.json
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc    274228 Apr  4 23:23 log.44004367._004220.job.log.tgz.1
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc        95 Apr  4 23:24 pilot_heartbeat.json
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc      7661 Apr  4 23:24 heartbeat.json
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc      8192 Apr  4 23:24 boinc_mmap_file
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc        27 Apr  4 23:24 wrapper_checkpoint.txt
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc      4616 Apr  4 23:24 pilotlog.txt
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc    431188 Apr  4 23:24 log.44004367._004220.job.log.1
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc       357 Apr  4 23:24 output.list
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc       620 Apr  4 23:24 runtime_log
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc    727040 Apr  4 23:24 result.tar.gz
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc     10972 Apr  4 23:24 runtime_log.err
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc       642 Apr  4 23:24 4FvLDmUlKK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmAQsKDmZ016bn.diag
[2025-04-04 23:24:48] -rw-r--r--. 1 boinc boinc     22039 Apr  4 23:24 stderr.txt
[2025-04-04 23:24:48] HITS file was successfully produced:
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc 194873284 Apr  4 23:22 shared/HITS.pool.root.1
[2025-04-04 23:24:48]  *** Contents of shared directory: ***
[2025-04-04 23:24:48] total 407120
[2025-04-04 23:24:48] -rw-r--r--. 2 boinc boinc 220729948 Apr  4 22:12 ATLAS.root_0
[2025-04-04 23:24:48] -rw-r--r--. 2 boinc boinc     17571 Apr  4 22:12 start_atlas.sh
[2025-04-04 23:24:48] -rw-r--r--. 2 boinc boinc    530806 Apr  4 22:12 input.tar.gz
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc 194873284 Apr  4 23:22 HITS.pool.root.1
[2025-04-04 23:24:48] -rw-------. 1 boinc boinc    727040 Apr  4 23:24 result.tar.gz
23:24:49 (3235116): run_atlas exited; CPU time 19684.685097
23:24:49 (3235116): called boinc_finish(0)

</stderr_txt>
]]>

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