Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-05 15:33:01 (11860): Detected: vboxwrapper 26206
2025-04-05 15:33:01 (11860): Detected: BOINC client v7.16.5
2025-04-05 15:33:02 (11860): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-04-05 15:33:02 (11860): Successfully copied 'init_data.xml' to the shared directory.
2025-04-05 15:33:03 (11860): Create VM. (boinc_be8237a10c333a0a, slot#2)
2025-04-05 15:33:03 (11860): Setting Memory Size for VM. (4400MB)
2025-04-05 15:33:03 (11860): Setting CPU Count for VM. (4)
2025-04-05 15:33:04 (11860): Setting Chipset Options for VM.
2025-04-05 15:33:04 (11860): Setting Graphics Controller Options for VM.
2025-04-05 15:33:04 (11860): Setting Boot Options for VM.
2025-04-05 15:33:04 (11860): Setting Network Configuration for NAT.
2025-04-05 15:33:05 (11860): Enabling VM Network Access.
2025-04-05 15:33:05 (11860): Disabling USB Support for VM.
2025-04-05 15:33:05 (11860): Disabling COM Port Support for VM.
2025-04-05 15:33:05 (11860): Disabling LPT Port Support for VM.
2025-04-05 15:33:06 (11860): Disabling Audio Support for VM.
2025-04-05 15:33:06 (11860): Disabling Clipboard Support for VM.
2025-04-05 15:33:06 (11860): Disabling Drag and Drop Support for VM.
2025-04-05 15:33:06 (11860): Adding storage controller(s) to VM.
2025-04-05 15:33:07 (11860): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-05 15:33:07 (11860): Adding VirtualBox Guest Additions to VM.
2025-04-05 15:33:08 (11860): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-05 15:33:08 (11860): forwarding host port 65298 to guest port 80
2025-04-05 15:33:08 (11860): Enabling remote desktop for VM.
2025-04-05 15:33:09 (11860): Enabling shared directory for VM.
2025-04-05 15:33:09 (11860): Starting VM using VBoxManage interface. (boinc_be8237a10c333a0a, slot#2)
2025-04-05 15:33:13 (11860): Successfully started VM. (PID = '5892')
2025-04-05 15:33:13 (11860): Reporting VM Process ID to BOINC.
2025-04-05 15:33:13 (11860): Guest Log: BIOS: VirtualBox 5.2.44
2025-04-05 15:33:13 (11860): Guest Log: CPUID EDX: 0x178bfbff
2025-04-05 15:33:13 (11860): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-05 15:33:13 (11860): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-05 15:33:13 (11860): Detected: Web Application Enabled (http://localhost:65298)
2025-04-05 15:33:13 (11860): Detected: Remote Desktop Enabled (localhost:65299)
2025-04-05 15:33:13 (11860): Preference change detected
2025-04-05 15:33:13 (11860): Setting CPU throttle for VM. (100%)
2025-04-05 15:33:14 (11860): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-05 15:33:15 (11860): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-05 15:33:15 (11860): Guest Log: BIOS: Booting from Hard Disk...
2025-04-05 15:33:18 (11860): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-05 15:33:18 (11860): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-05 15:33:18 (11860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-05 15:33:23 (11860): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-05 15:33:23 (11860): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-05 15:33:29 (11860): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-05 15:33:29 (11860): Guest Log: 00:00:00.000231 main     Log opened 2025-04-05T15:33:27.557783000Z
2025-04-05 15:33:29 (11860): Guest Log: 00:00:00.000369 main     OS Product: Linux
2025-04-05 15:33:29 (11860): Guest Log: 00:00:00.000417 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-05 15:33:29 (11860): Guest Log: 00:00:00.000449 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-05 15:33:29 (11860): Guest Log: 00:00:00.000476 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-05 15:33:29 (11860): Guest Log: 00:00:00.000477 main     Process ID: 1301
2025-04-05 15:33:29 (11860): Guest Log: 00:00:00.000477 main     Package type: LINUX_64BITS_GENERIC
2025-04-05 15:33:29 (11860): Guest Log: 00:00:00.002114 main     5.2.32 r132073 started. Verbose level = 0
2025-04-05 15:33:29 (11860): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-05 15:33:29 (11860): Guest Log: [INFO] Mounting shared directory
2025-04-05 15:33:29 (11860): Guest Log: [INFO] Checking for init_data.xml
2025-04-05 15:33:32 (11860): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-05 15:33:32 (11860): Guest Log: [INFO] Detected branch: prod
2025-04-05 15:33:32 (11860): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-05 15:33:32 (11860): Guest Log: Copying input files
2025-04-05 15:33:35 (11860): Guest Log: Copied input files into RunAtlas.
2025-04-05 15:33:35 (11860): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-05 15:33:35 (11860): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-05 15:33:35 (11860): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-05 15:33:35 (11860): Guest Log: Further information can be found at the LHC@home message board.
2025-04-05 15:33:39 (11860): Guest Log: 00:00:10.004661 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 079 669 000ns (GuestNow=1 743 856 419 482 226 000 ns GuestLast=1 743 867 207 561 895 000 ns fSetTimeLastLoop=true )
2025-04-05 15:33:46 (11860): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-05 15:33:46 (11860): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-05 15:33:46 (11860): Guest Log: 2.6.3.0 1577 0 30188 144527 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-05 15:33:47 (11860): Guest Log: copied the webapp to /var/www
2025-04-05 15:33:47 (11860): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-05 15:33:47 (11860): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-05 15:33:48 (11860): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-05 15:33:48 (11860): Guest Log:  *** Starting ATLAS job. (PandaID=6586399512 taskID=43634898) ***
2025-04-05 17:13:16 (11860): Status Report: Elapsed Time: '6000.000000'
2025-04-05 17:13:16 (11860): Status Report: CPU Time: '16301.781250'
2025-04-05 18:53:20 (11860): Status Report: Elapsed Time: '12000.000000'
2025-04-05 18:53:20 (11860): Status Report: CPU Time: '39826.359375'
2025-04-05 20:33:24 (11860): Status Report: Elapsed Time: '18000.000000'
2025-04-05 20:33:24 (11860): Status Report: CPU Time: '63489.734375'
2025-04-05 22:13:28 (11860): Status Report: Elapsed Time: '24000.000000'
2025-04-05 22:13:28 (11860): Status Report: CPU Time: '85858.046875'
2025-04-05 22:21:01 (11860): Guest Log:  *** Job finished ***
2025-04-05 22:21:01 (11860): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:46,531 | INFO     | [data] queue_monitor thread has finished
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:51,334 | INFO     | job.realtimelogging is not enabled
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:52,337 | INFO     | [payload] run_realtimelog thread has finished
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:54,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926960142144)>', '<ExcThread(monitor, started 139926368659200)>']
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:55,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:55,192 | INFO     | [monitor] control thread has ended
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,416 | INFO     | all workflow threads have been joined
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,416 | INFO     | end of generic workflow (traces error code: 0)
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,416 | INFO     | traces error code: 0
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,416 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,526 [wrapper] ==== pilot stdout END ====
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,532 [wrapper] ==== wrapper stdout RESUME ====
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,538 [wrapper] pilotpid: 5931
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,544 [wrapper] Pilot exit status: 0
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,674 [wrapper] pandaids: 6586399512
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,708 [wrapper] cleanup supervisor_pilot 26650 5932
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,717 [wrapper] Test setup, not cleaning
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,723 [wrapper] apfmon messages muted
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,728 [wrapper] ==== wrapper stdout END ====
2025-04-05 22:21:01 (11860): Guest Log: 2025-04-05 19:20:59,733 [wrapper] ==== wrapper stderr END ====
2025-04-05 22:21:01 (11860): Guest Log:  *** Error codes and diagnostics ***
2025-04-05 22:21:01 (11860): Guest Log:     "exeErrorCode": 0,
2025-04-05 22:21:01 (11860): Guest Log:     "exeErrorDiag": "",
2025-04-05 22:21:01 (11860): Guest Log:     "pilotErrorCode": 0,
2025-04-05 22:21:01 (11860): Guest Log:     "pilotErrorDiag": "",
2025-04-05 22:21:01 (11860): Guest Log:  *** Listing of results directory ***
2025-04-05 22:21:01 (11860): Guest Log: total 327844
2025-04-05 22:21:01 (11860): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr  4 00:26 pilot3.tar.gz
2025-04-05 22:21:01 (11860): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr  4 00:35 queuedata.json
2025-04-05 22:21:01 (11860): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  4 00:36 runpilot2-wrapper.sh
2025-04-05 22:21:01 (11860): Guest Log: -rwxr-xr-x. 1 atlas atlas      8857 Apr  5 12:33 init_data.xml
2025-04-05 22:21:01 (11860): Guest Log: -rwxr-xr-x. 1 atlas atlas    508894 Apr  5 12:33 input.tar.gz
2025-04-05 22:21:01 (11860): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr  5 12:33 start_atlas.sh
2025-04-05 22:21:01 (11860): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  5 12:33 EVNT.43634896._000714.pool.root.1 -> /data/./ATLAS.root_0
2025-04-05 22:21:01 (11860): Guest Log: -rw-r--r--. 1 atlas atlas      2599 Apr  5 12:33 pandaJob.out
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas       424 Apr  5 12:34 setup.sh.local
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas    979987 Apr  5 12:38 agis_schedconf.cvmfs.json
2025-04-05 22:21:01 (11860): Guest Log: drwx------. 4 atlas atlas      4096 Apr  5 12:39 pilot3
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas        95 Apr  5 19:19 pilot_heartbeat.json
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas 327042929 Apr  5 19:19 HITS.43634898._019233.pool.root.1
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas      1044 Apr  5 19:20 memory_monitor_summary.json
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas   1603525 Apr  5 19:20 agis_ddmendpoints.agis.ALL.json
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas    419444 Apr  5 19:20 log.43634898._019233.job.log.tgz.1
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas      7728 Apr  5 19:20 heartbeat.json
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas      4608 Apr  5 19:20 pilotlog.txt
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas   2025937 Apr  5 19:20 log.43634898._019233.job.log.1
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas       357 Apr  5 19:20 output.list
2025-04-05 22:21:01 (11860): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  5 19:20 runtime_log
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas   2467840 Apr  5 19:20 result.tar.gz
2025-04-05 22:21:01 (11860): Guest Log: -rw-r--r--. 1 atlas atlas     10981 Apr  5 19:20 runtime_log.err
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas       671 Apr  5 19:20 H7dKDm5DkK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmbKILDmPYbuTo.diag
2025-04-05 22:21:01 (11860): Guest Log: Looking for outputfile HITS.43634898._019233.pool.root.1
2025-04-05 22:21:01 (11860): Guest Log: HITS file was successfully produced
2025-04-05 22:21:01 (11860): Guest Log: -rw-------. 1 atlas atlas 327042929 Apr  5 19:19 /home/atlas/RunAtlas/HITS.43634898._019233.pool.root.1
2025-04-05 22:21:03 (11860): Guest Log: Successfully finished the ATLAS job!
2025-04-05 22:21:03 (11860): Guest Log: Copying the results back to the shared directory!
2025-04-05 22:21:03 (11860): Guest Log:  *** Contents of shared directory: ***
2025-04-05 22:21:03 (11860): Guest Log: total 670344
2025-04-05 22:21:03 (11860): Guest Log: -rwxrwxrwx. 1 root root 356370689 Apr  5 12:33 ATLAS.root_0
2025-04-05 22:21:03 (11860): Guest Log: -rwxrwxrwx. 1 root root 327042929 Apr  5 19:21 HITS.pool.root.1
2025-04-05 22:21:03 (11860): Guest Log: -rwxrwxrwx. 1 root root      8857 Apr  5 12:33 init_data.xml
2025-04-05 22:21:03 (11860): Guest Log: -rwxrwxrwx. 1 root root    508894 Apr  4 10:35 input.tar.gz
2025-04-05 22:21:03 (11860): Guest Log: -rwxrwxrwx. 1 root root   2467840 Apr  5 19:21 result.tar.gz
2025-04-05 22:21:03 (11860): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr  4 10:35 start_atlas.sh
2025-04-05 22:21:03 (11860): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-05 22:21:03 (11860): VM Completion File Detected.
2025-04-05 22:21:03 (11860): Powering off VM.
2025-04-05 22:21:03 (11860): Successfully stopped VM.
2025-04-05 22:21:03 (11860): Deregistering VM. (boinc_be8237a10c333a0a, slot#2)
2025-04-05 22:21:03 (11860): Removing network bandwidth throttle group from VM.
2025-04-05 22:21:04 (11860): Removing VM from VirtualBox.
22:21:09 (11860): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN