Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:39:15 (3252032): wrapper (7.7.26015): starting
14:39:15 (3252032): wrapper: running run_atlas (--nthreads 9)
[2025-04-04 14:39:15] Arguments: --nthreads 9
[2025-04-04 14:39:15] Threads: 9
[2025-04-04 14:39:15] Checking for CVMFS
[2025-04-04 14:39:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 14:39:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 14:39:16] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 14:39:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 14:39:18] 2.12.6.0 1724982 191605 432084 144500 0 149 25448336 32935936 15133 130560 0 21881963 99.848 8350167 18221 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 14:39:18] CVMFS is ok
[2025-04-04 14:39:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 14:39:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 14:39:18] Further information can be found at the LHC@home message board.
[2025-04-04 14:39:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 14:39:18] Checking for apptainer binary...
[2025-04-04 14:39:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 14:39:18] Running /usr/bin/apptainer --version
[2025-04-04 14:39:19] apptainer version 1.4.0-1.el9
[2025-04-04 14:39:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 14:39:21] c6-2-29-1.aglt2.org
[2025-04-04 14:39:21] apptainer works
[2025-04-04 14:39:21] Set ATHENA_PROC_NUMBER=9
[2025-04-04 14:39:21] Set ATHENA_CORE_NUMBER=9
[2025-04-04 14:39:21] Starting ATLAS job with PandaID=6587352824
[2025-04-04 14:39:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 22:20:19]  *** The last 200 lines of the pilot log: ***
[2025-04-04 22:20:19] 2025-04-05 02:20:06,049 | INFO     | mean y: 2469451.3589164787
[2025-04-04 22:20:19] 2025-04-05 02:20:06,049 | INFO     | -- intersect: -29703234709.479446
[2025-04-04 22:20:19] 2025-04-05 02:20:06,049 | INFO     | intersect: -29703234709.479446
[2025-04-04 22:20:19] 2025-04-05 02:20:06,050 | INFO     | chi2: 8.859058888145572
[2025-04-04 22:20:19] 2025-04-05 02:20:06,050 | INFO     | current chi2=8.859058888145572 (change=10.435305011480587 %)
[2025-04-04 22:20:19] 2025-04-05 02:20:06,050 | INFO     | right removable region: 442
[2025-04-04 22:20:19] 2025-04-05 02:20:06,051 | INFO     | sum of square deviations: 26956121025.14667
[2025-04-04 22:20:19] 2025-04-05 02:20:06,055 | INFO     | sum of deviations: 280237125320.7003
[2025-04-04 22:20:19] 2025-04-05 02:20:06,055 | INFO     | mean x: 1743806100.7404063
[2025-04-04 22:20:19] 2025-04-05 02:20:06,056 | INFO     | mean y: 2485712.223476298
[2025-04-04 22:20:19] 2025-04-05 02:20:06,056 | INFO     | -- intersect: -18126206035.833107
[2025-04-04 22:20:19] 2025-04-05 02:20:06,056 | INFO     | intersect: -18126206035.833107
[2025-04-04 22:20:19] 2025-04-05 02:20:06,056 | INFO     | chi2: 6.236901072494394
[2025-04-04 22:20:19] 2025-04-05 02:20:06,056 | INFO     | current chi2=6.236901072494394 (change=36.945204983453884 %)
[2025-04-04 22:20:19] 2025-04-05 02:20:06,057 | INFO     | sum of square deviations: 26053591343.82877
[2025-04-04 22:20:19] 2025-04-05 02:20:06,066 | INFO     | sum of deviations: 178584509438.86285
[2025-04-04 22:20:19] 2025-04-05 02:20:06,067 | INFO     | mean x: 1743806253.239726
[2025-04-04 22:20:19] 2025-04-05 02:20:06,067 | INFO     | mean y: 2502880.5251141554
[2025-04-04 22:20:19] 2025-04-05 02:20:06,067 | INFO     | -- intersect: -11950428298.193254
[2025-04-04 22:20:19] 2025-04-05 02:20:06,067 | INFO     | intersect: -11950428298.193254
[2025-04-04 22:20:19] 2025-04-05 02:20:06,067 | INFO     | chi2: 4.375964253368727
[2025-04-04 22:20:19] 2025-04-05 02:20:06,067 | INFO     | current chi2=4.375964253368727 (change=29.83752343503826 %)
[2025-04-04 22:20:19] 2025-04-05 02:20:06,072 | INFO     | sum of square deviations: 25171380458.5452
[2025-04-04 22:20:19] 2025-04-05 02:20:06,085 | INFO     | sum of deviations: 96483785245.17787
[2025-04-04 22:20:19] 2025-04-05 02:20:06,085 | INFO     | mean x: 1743806405.743649
[2025-04-04 22:20:19] 2025-04-05 02:20:06,085 | INFO     | mean y: 2517067.064665127
[2025-04-04 22:20:19] 2025-04-05 02:20:06,085 | INFO     | -- intersect: -6681623401.036615
[2025-04-04 22:20:19] 2025-04-05 02:20:06,085 | INFO     | intersect: -6681623401.036615
[2025-04-04 22:20:19] 2025-04-05 02:20:06,086 | INFO     | chi2: 3.172259856481352
[2025-04-04 22:20:19] 2025-04-05 02:20:06,086 | INFO     | current chi2=3.172259856481352 (change=27.50718075360723 %)
[2025-04-04 22:20:19] 2025-04-05 02:20:06,086 | INFO     | sum of square deviations: 24309336387.240356
[2025-04-04 22:20:19] 2025-04-05 02:20:06,094 | INFO     | sum of deviations: 22778235759.848137
[2025-04-04 22:20:19] 2025-04-05 02:20:06,095 | INFO     | mean x: 1743806558.245327
[2025-04-04 22:20:19] 2025-04-05 02:20:06,095 | INFO     | mean y: 2530106.0490654204
[2025-04-04 22:20:19] 2025-04-05 02:20:06,095 | INFO     | -- intersect: -1631444440.6247115
[2025-04-04 22:20:19] 2025-04-05 02:20:06,095 | INFO     | intersect: -1631444440.6247115
[2025-04-04 22:20:19] 2025-04-05 02:20:06,096 | INFO     | chi2: 2.191927395444836
[2025-04-04 22:20:19] 2025-04-05 02:20:06,096 | INFO     | current chi2=2.191927395444836 (change=30.903283633387257 %)
[2025-04-04 22:20:19] 2025-04-05 02:20:06,096 | INFO     | sum of square deviations: 23467251392.912643
[2025-04-04 22:20:19] 2025-04-05 02:20:06,104 | INFO     | sum of deviations: -28430632894.14187
[2025-04-04 22:20:19] 2025-04-05 02:20:06,104 | INFO     | mean x: 1743806710.7423167
[2025-04-04 22:20:19] 2025-04-05 02:20:06,105 | INFO     | mean y: 2539359.879432624
[2025-04-04 22:20:19] 2025-04-05 02:20:06,105 | INFO     | -- intersect: 2115165487.301785
[2025-04-04 22:20:19] 2025-04-05 02:20:06,105 | INFO     | intersect: 2115165487.301785
[2025-04-04 22:20:19] 2025-04-05 02:20:06,105 | INFO     | chi2: 1.6549335142404327
[2025-04-04 22:20:19] 2025-04-05 02:20:06,105 | INFO     | current chi2=1.6549335142404327 (change=24.498707499179023 %)
[2025-04-04 22:20:19] 2025-04-05 02:20:06,106 | INFO     | left removable region: 50
[2025-04-04 22:20:19] 2025-04-05 02:20:06,106 | INFO     | sum of square deviations: 18676361510.48972
[2025-04-04 22:20:19] 2025-04-05 02:20:06,114 | INFO     | sum of deviations: -58733977328.44898
[2025-04-04 22:20:19] 2025-04-05 02:20:06,119 | INFO     | mean x: 1743807290.2551022
[2025-04-04 22:20:19] 2025-04-05 02:20:06,119 | INFO     | mean y: 2562319.224489796
[2025-04-04 22:20:19] 2025-04-05 02:20:06,119 | INFO     | -- intersect: 5486539366.547216
[2025-04-04 22:20:19] 2025-04-05 02:20:06,119 | INFO     | intersect: 5486539366.547216
[2025-04-04 22:20:19] 2025-04-05 02:20:06,120 | INFO     | chi2: 0.3012034228267211
[2025-04-04 22:20:19] 2025-04-05 02:20:06,120 | INFO     | -- intersect: 5486539366.547216
[2025-04-04 22:20:19] 2025-04-05 02:20:06,120 | INFO     | current memory leak: -3.14 B/s (using 392 data points, chi2=0.30)
[2025-04-04 22:20:19] 2025-04-05 02:20:06,121 | INFO     | ..............................
[2025-04-04 22:20:19] 2025-04-05 02:20:06,121 | INFO     | . Timing measurements:
[2025-04-04 22:20:19] 2025-04-05 02:20:06,121 | INFO     | . get job = 1 s
[2025-04-04 22:20:19] 2025-04-05 02:20:06,121 | INFO     | . initial setup = 19 s
[2025-04-04 22:20:19] 2025-04-05 02:20:06,121 | INFO     | . payload setup = 73 s
[2025-04-04 22:20:19] 2025-04-05 02:20:06,122 | INFO     | . stage-in = 0 s
[2025-04-04 22:20:19] 2025-04-05 02:20:06,122 | INFO     | . payload execution = 27310 s
[2025-04-04 22:20:19] 2025-04-05 02:20:06,122 | INFO     | . stage-out = 3 s
[2025-04-04 22:20:19] 2025-04-05 02:20:06,122 | INFO     | . log creation = 0 s
[2025-04-04 22:20:19] 2025-04-05 02:20:06,122 | INFO     | ..............................
[2025-04-04 22:20:19] 2025-04-05 02:20:06,240 | INFO     | 
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | job summary report
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | --------------------------------------------------
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | PanDA job id: 6587352824
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | task id: 43634898
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | errors: (none)
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | pilot state: finished 
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | transexitcode: 0
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | exeerrorcode: 0
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | exeerrordiag: 
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | exitcode: 0
[2025-04-04 22:20:19] 2025-04-05 02:20:06,241 | INFO     | exitmsg: OK
[2025-04-04 22:20:19] 2025-04-05 02:20:06,242 | INFO     | cpuconsumptiontime: 74753 s
[2025-04-04 22:20:19] 2025-04-05 02:20:06,242 | INFO     | nevents: 400
[2025-04-04 22:20:19] 2025-04-05 02:20:06,242 | INFO     | neventsw: 0
[2025-04-04 22:20:19] 2025-04-05 02:20:06,242 | INFO     | pid: 3273033
[2025-04-04 22:20:19] 2025-04-05 02:20:06,242 | INFO     | pgrp: 3273033
[2025-04-04 22:20:19] 2025-04-05 02:20:06,242 | INFO     | corecount: 9
[2025-04-04 22:20:19] 2025-04-05 02:20:06,242 | INFO     | event service: False
[2025-04-04 22:20:19] 2025-04-05 02:20:06,242 | INFO     | sizes: {0: 2416521, 1: 2417122, 3: 2417206, 4: 2417262, 5: 2417489, 6: 2417489, 17: 2417645, 29: 2417673, 40: 2417701, 51: 2417729, 56: 2417963, 62: 2418271, 27387
[2025-04-04 22:20:19] 2025-04-05 02:20:06,242 | INFO     | --------------------------------------------------
[2025-04-04 22:20:19] 2025-04-05 02:20:06,242 | INFO     | 
[2025-04-04 22:20:19] 2025-04-05 02:20:06,242 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-04 22:20:19] 2025-04-05 02:20:06,263 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,264 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,264 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,264 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | job 6587352824 has completed (purged errors)
[2025-04-04 22:20:19] 2025-04-05 02:20:06,265 | INFO     | overall cleanup function is called
[2025-04-04 22:20:19] 2025-04-05 02:20:07,276 | INFO     | --- collectZombieJob: --- 10, [3273033]
[2025-04-04 22:20:19] 2025-04-05 02:20:07,276 | INFO     | zombie collector waiting for pid 3273033
[2025-04-04 22:20:19] 2025-04-05 02:20:07,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 22:20:19] 2025-04-05 02:20:07,277 | INFO     | collected zombie processes
[2025-04-04 22:20:19] 2025-04-05 02:20:07,277 | INFO     | will attempt to kill all subprocesses of pid=3273033
[2025-04-04 22:20:19] 2025-04-05 02:20:07,644 | INFO     | process IDs to be killed: [3273033] (in reverse order)
[2025-04-04 22:20:19] 2025-04-05 02:20:07,738 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 22:20:19] 2025-04-05 02:20:07,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 22:20:19] 2025-04-05 02:20:07,750 | INFO     | did not find any defunct processes belonging to 3273033
[2025-04-04 22:20:19] 2025-04-05 02:20:07,761 | INFO     | did not find any defunct processes belonging to 3273033
[2025-04-04 22:20:19] 2025-04-05 02:20:07,761 | INFO     | ready for new job
[2025-04-04 22:20:19] 2025-04-05 02:20:07,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 22:20:19] 2025-04-05 02:20:07,763 | INFO     | **************************************
[2025-04-04 22:20:19] 2025-04-05 02:20:07,764 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 22:20:19] 2025-04-05 02:20:07,764 | INFO     | **************************************
[2025-04-04 22:20:19] 2025-04-05 02:20:07,764 | INFO     | 
[2025-04-04 22:20:19] 2025-04-05 02:20:07,779 | INFO     | architecture information:
[2025-04-04 22:20:19] 2025-04-05 02:20:07,783 | INFO     | executing command: cat /etc/os-release
[2025-04-04 22:20:19] 2025-04-05 02:20:07,838 | INFO     | cat /etc/os-release:
[2025-04-04 22:20:19] NAME="CentOS Linux"
[2025-04-04 22:20:19] VERSION="7 (Core)"
[2025-04-04 22:20:19] ID="centos"
[2025-04-04 22:20:19] ID_LIKE="rhel fedora"
[2025-04-04 22:20:19] VERSION_ID="7"
[2025-04-04 22:20:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 22:20:19] ANSI_COLOR="0;31"
[2025-04-04 22:20:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 22:20:19] HOME_URL="https://www.centos.org/"
[2025-04-04 22:20:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 22:20:19] 
[2025-04-04 22:20:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 22:20:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 22:20:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 22:20:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 22:20:19] 
[2025-04-04 22:20:19] 2025-04-05 02:20:07,838 | INFO     | **************************************
[2025-04-04 22:20:19] 2025-04-05 02:20:08,342 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-04 22:20:19] 2025-04-05 02:20:08,395 | INFO     | sufficient remaining disk space (76088868864 B)
[2025-04-04 22:20:19] 2025-04-05 02:20:08,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 22:20:19] 2025-04-05 02:20:08,396 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 22:20:19] 2025-04-05 02:20:08,396 | INFO     | update_server=False
[2025-04-04 22:20:19] 2025-04-05 02:20:08,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 22:20:19] 2025-04-05 02:20:08,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 22:20:19] 2025-04-05 02:20:08,522 | INFO     | all data control threads have been joined
[2025-04-04 22:20:19] 2025-04-05 02:20:08,653 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-04 22:20:19] 2025-04-05 02:20:08,655 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-04 22:20:19] 2025-04-05 02:20:08,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 22:20:19] 2025-04-05 02:20:08,655 | INFO     | will abort loop
[2025-04-04 22:20:19] 2025-04-05 02:20:08,847 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 22:20:19] 2025-04-05 02:20:08,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 22:20:19] 2025-04-05 02:20:08,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 22:20:19] 2025-04-05 02:20:08,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 22:20:19] 2025-04-05 02:20:09,272 | INFO     | all job control threads have been joined
[2025-04-04 22:20:19] 2025-04-05 02:20:09,404 | INFO     | [job] retrieve thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:09,528 | INFO     | [data] control thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:09,662 | INFO     | [job] job monitor thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:09,675 | INFO     | all payload control threads have been joined
[2025-04-04 22:20:19] 2025-04-05 02:20:09,958 | INFO     | [payload] failed_post thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:10,278 | INFO     | [job] control thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:10,304 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:10,334 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:10,401 | INFO     | [payload] validate_post thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:10,455 | INFO     | [data] copytool_out thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:10,592 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:10,681 | INFO     | [payload] control thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:10,715 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:10,798 | INFO     | [data] copytool_in thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:10,818 | INFO     | [job] validate thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:11,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 22:20:19] 2025-04-05 02:20:12,259 | INFO     | [job] queue monitor thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:12,873 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 22:20:19] 2025-04-05 02:20:13,523 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719882041152)>', '<ExcThread(monitor, started 139718498969344)>']
[2025-04-04 22:20:19] 2025-04-05 02:20:13,882 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 22:20:19] 2025-04-05 02:20:13,883 | INFO     | [monitor] control thread has ended
[2025-04-04 22:20:19] 2025-04-05 02:20:18,549 | INFO     | all workflow threads have been joined
[2025-04-04 22:20:19] 2025-04-05 02:20:18,549 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 22:20:19] 2025-04-05 02:20:18,549 | INFO     | traces error code: 0
[2025-04-04 22:20:19] 2025-04-05 02:20:18,550 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 22:20:19] 2025-04-05 02:20:18,821 [wrapper] ==== pilot stdout END ====
[2025-04-04 22:20:19] 2025-04-05 02:20:18,849 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 22:20:19] 2025-04-05 02:20:18,884 [wrapper] pilotpid: 3256993
[2025-04-04 22:20:19] 2025-04-05 02:20:18,913 [wrapper] Pilot exit status: 0
[2025-04-04 22:20:19] 2025-04-05 02:20:19,023 [wrapper] pandaids: 6587352824
[2025-04-04 22:20:19] 2025-04-05 02:20:19,335 [wrapper] cleanup supervisor_pilot  498620 3256994
[2025-04-04 22:20:19] 2025-04-05 02:20:19,369 [wrapper] Test setup, not cleaning
[2025-04-04 22:20:19] 2025-04-05 02:20:19,405 [wrapper] apfmon messages muted
[2025-04-04 22:20:19] 2025-04-05 02:20:19,429 [wrapper] ==== wrapper stdout END ====
[2025-04-04 22:20:19] 2025-04-05 02:20:19,477 [wrapper] ==== wrapper stderr END ====
[2025-04-04 22:20:19]  *** Error codes and diagnostics ***
[2025-04-04 22:20:19]     "exeErrorCode": 0,
[2025-04-04 22:20:19]     "exeErrorDiag": "",
[2025-04-04 22:20:19]     "pilotErrorCode": 0,
[2025-04-04 22:20:19]     "pilotErrorDiag": "",
[2025-04-04 22:20:19]  *** Listing of results directory ***
[2025-04-04 22:20:19] total 672988
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas    495897 Apr  4 01:45 pilot3.tar.gz
[2025-04-04 22:20:19] -rwx------. 1 boincer umatlas     37140 Apr  4 01:59 runpilot2-wrapper.sh
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas      5111 Apr  4 01:59 queuedata.json
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas       100 Apr  4 14:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 22:20:19] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 14:39 run_atlas
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas       105 Apr  4 14:39 job.xml
[2025-04-04 22:20:19] -rw-r--r--. 2 boincer umatlas 358131306 Apr  4 14:39 EVNT.43634896._000426.pool.root.1
[2025-04-04 22:20:19] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 14:39 shared
[2025-04-04 22:20:19] -rw-r--r--. 2 boincer umatlas    508899 Apr  4 14:39 input.tar.gz
[2025-04-04 22:20:19] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 14:39 start_atlas.sh
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas         0 Apr  4 14:39 boinc_lockfile
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas      2599 Apr  4 14:39 pandaJob.out
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas       467 Apr  4 14:39 setup.sh.local
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas    979987 Apr  4 14:41 agis_schedconf.cvmfs.json
[2025-04-04 22:20:19] drwx------. 4 boincer umatlas      4096 Apr  4 14:41 pilot3
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas      6840 Apr  4 22:11 init_data.xml
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas 321734417 Apr  4 22:18 HITS.43634898._021158.pool.root.1
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas       532 Apr  4 22:19 boinc_task_state.xml
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas        95 Apr  4 22:19 pilot_heartbeat.json
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas      1048 Apr  4 22:19 memory_monitor_summary.json
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas   1603525 Apr  4 22:19 agis_ddmendpoints.agis.ALL.json
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas    530265 Apr  4 22:19 log.43634898._021158.job.log.tgz.1
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas        28 Apr  4 22:20 wrapper_checkpoint.txt
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 22:20 boinc_mmap_file
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas      7731 Apr  4 22:20 heartbeat.json
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas      4539 Apr  4 22:20 pilotlog.txt
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas   2188147 Apr  4 22:20 log.43634898._021158.job.log.1
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas       357 Apr  4 22:20 output.list
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas       620 Apr  4 22:20 runtime_log
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas   2734080 Apr  4 22:20 result.tar.gz
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas     11424 Apr  4 22:20 runtime_log.err
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas       661 Apr  4 22:20 AgWMDmzGpK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQZtKDmoZwKqn.diag
[2025-04-04 22:20:19] -rw-r--r--. 1 boincer umatlas     20910 Apr  4 22:20 stderr.txt
[2025-04-04 22:20:19] HITS file was successfully produced:
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas 321734417 Apr  4 22:18 shared/HITS.pool.root.1
[2025-04-04 22:20:19]  *** Contents of shared directory: ***
[2025-04-04 22:20:19] total 667132
[2025-04-04 22:20:19] -rw-r--r--. 2 boincer umatlas 358131306 Apr  4 14:39 ATLAS.root_0
[2025-04-04 22:20:19] -rw-r--r--. 2 boincer umatlas    508899 Apr  4 14:39 input.tar.gz
[2025-04-04 22:20:19] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 14:39 start_atlas.sh
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas 321734417 Apr  4 22:18 HITS.pool.root.1
[2025-04-04 22:20:19] -rw-------. 1 boincer umatlas   2734080 Apr  4 22:20 result.tar.gz
22:20:21 (3252032): run_atlas exited; CPU time 75525.984324
22:20:21 (3252032): called boinc_finish(0)

</stderr_txt>
]]>

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