Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:37:10 (164255): wrapper (7.7.26015): starting
19:37:10 (164255): wrapper: running run_atlas (--nthreads 12)
[2025-04-04 19:37:10] Arguments: --nthreads 12
[2025-04-04 19:37:10] Threads: 12
[2025-04-04 19:37:10] Checking for CVMFS
[2025-04-04 19:37:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 19:37:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 19:37:11] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 19:37:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 19:37:11] 2.12.7.0 20930 14761 239392 144497 3 245 43109187 46080001 7916 130560 0 153519511 99.896 54294409 19238 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-04 19:37:11] CVMFS is ok
[2025-04-04 19:37:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 19:37:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 19:37:11] Further information can be found at the LHC@home message board.
[2025-04-04 19:37:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 19:37:11] Checking for apptainer binary...
[2025-04-04 19:37:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 19:37:11] Running /usr/bin/apptainer --version
[2025-04-04 19:37:11] apptainer version 1.3.6-1.el9
[2025-04-04 19:37:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 19:37:12] mff2103.farm.particle.cz
[2025-04-04 19:37:12] apptainer works
[2025-04-04 19:37:12] Set ATHENA_PROC_NUMBER=12
[2025-04-04 19:37:12] Set ATHENA_CORE_NUMBER=12
[2025-04-04 19:37:12] Starting ATLAS job with PandaID=6586399102
[2025-04-04 19:37:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 21:27:11]  *** The last 200 lines of the pilot log: ***
[2025-04-04 21:27:11] 2025-04-04 19:26:50,238 | INFO     | -- intersect: -262576531256.793
[2025-04-04 21:27:11] 2025-04-04 19:26:50,238 | INFO     | intersect: -262576531256.793
[2025-04-04 21:27:11] 2025-04-04 19:26:50,238 | INFO     | chi2: 5.839974776267156
[2025-04-04 21:27:11] 2025-04-04 19:26:50,238 | INFO     | sum of square deviations: 329031285.5
[2025-04-04 21:27:11] 2025-04-04 19:26:50,239 | INFO     | sum of deviations: 61930881410.999985
[2025-04-04 21:27:11] 2025-04-04 19:26:50,239 | INFO     | mean x: 1743791372.5
[2025-04-04 21:27:11] 2025-04-04 19:26:50,239 | INFO     | mean y: 2570964.8039215687
[2025-04-04 21:27:11] 2025-04-04 19:26:50,239 | INFO     | -- intersect: -328217089155.69977
[2025-04-04 21:27:11] 2025-04-04 19:26:50,239 | INFO     | intersect: -328217089155.69977
[2025-04-04 21:27:11] 2025-04-04 19:26:50,239 | INFO     | chi2: 4.957726453061829
[2025-04-04 21:27:11] 2025-04-04 19:26:50,239 | INFO     | current chi2=4.957726453061829 (change=15.107057085086417 %)
[2025-04-04 21:27:11] 2025-04-04 19:26:50,240 | INFO     | right removable region: 101
[2025-04-04 21:27:11] 2025-04-04 19:26:50,240 | INFO     | sum of square deviations: 329031285.5
[2025-04-04 21:27:11] 2025-04-04 19:26:50,240 | INFO     | sum of deviations: 27206925278.499996
[2025-04-04 21:27:11] 2025-04-04 19:26:50,240 | INFO     | mean x: 1743791677.5
[2025-04-04 21:27:11] 2025-04-04 19:26:50,241 | INFO     | mean y: 2647332.245098039
[2025-04-04 21:27:11] 2025-04-04 19:26:50,241 | INFO     | -- intersect: -144187926518.2548
[2025-04-04 21:27:11] 2025-04-04 19:26:50,241 | INFO     | intersect: -144187926518.2548
[2025-04-04 21:27:11] 2025-04-04 19:26:50,241 | INFO     | chi2: 2.9720317246028993
[2025-04-04 21:27:11] 2025-04-04 19:26:50,241 | INFO     | current chi2=2.9720317246028993 (change=49.10882600587896 %)
[2025-04-04 21:27:11] 2025-04-04 19:26:50,241 | INFO     | sum of square deviations: 282974608.0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,242 | INFO     | sum of deviations: 3039488175.0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,242 | INFO     | mean x: 1743791830.0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,242 | INFO     | mean y: 2727408.7216494847
[2025-04-04 21:27:11] 2025-04-04 19:26:50,242 | INFO     | -- intersect: -18727697502.571487
[2025-04-04 21:27:11] 2025-04-04 19:26:50,242 | INFO     | intersect: -18727697502.571487
[2025-04-04 21:27:11] 2025-04-04 19:26:50,242 | INFO     | chi2: 1.2331687455386746
[2025-04-04 21:27:11] 2025-04-04 19:26:50,242 | INFO     | current chi2=1.2331687455386746 (change=58.5075510691784 %)
[2025-04-04 21:27:11] 2025-04-04 19:26:50,243 | INFO     | sum of square deviations: 241429643.0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,243 | INFO     | sum of deviations: -5843991357.0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,243 | INFO     | mean x: 1743791982.5
[2025-04-04 21:27:11] 2025-04-04 19:26:50,243 | INFO     | mean y: 2759469.7608695654
[2025-04-04 21:27:11] 2025-04-04 19:26:50,243 | INFO     | -- intersect: 42212593968.5672
[2025-04-04 21:27:11] 2025-04-04 19:26:50,243 | INFO     | intersect: 42212593968.5672
[2025-04-04 21:27:11] 2025-04-04 19:26:50,244 | INFO     | chi2: 0.9115505074328722
[2025-04-04 21:27:11] 2025-04-04 19:26:50,244 | INFO     | current chi2=0.9115505074328722 (change=26.08063489034606 %)
[2025-04-04 21:27:11] 2025-04-04 19:26:50,244 | INFO     | sum of square deviations: 204163828.0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,244 | INFO     | sum of deviations: -5499113156.0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,244 | INFO     | mean x: 1743792135.0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,245 | INFO     | mean y: 2758019.3448275863
[2025-04-04 21:27:11] 2025-04-04 19:26:50,245 | INFO     | -- intersect: 46971461363.346725
[2025-04-04 21:27:11] 2025-04-04 19:26:50,245 | INFO     | intersect: 46971461363.346725
[2025-04-04 21:27:11] 2025-04-04 19:26:50,245 | INFO     | chi2: 0.9130665519070968
[2025-04-04 21:27:11] 2025-04-04 19:26:50,245 | INFO     | current chi2=0.9130665519070968 (change=-0.1663149174799008 %)
[2025-04-04 21:27:11] 2025-04-04 19:26:50,245 | INFO     | left removable region: 40
[2025-04-04 21:27:11] 2025-04-04 19:26:50,245 | INFO     | sum of square deviations: 70364110.0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,245 | INFO     | sum of deviations: 1163968389.0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,246 | INFO     | mean x: 1743792562.0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,246 | INFO     | mean y: 2786735.4426229508
[2025-04-04 21:27:11] 2025-04-04 19:26:50,246 | INFO     | -- intersect: -28843160710.511326
[2025-04-04 21:27:11] 2025-04-04 19:26:50,246 | INFO     | intersect: -28843160710.511326
[2025-04-04 21:27:11] 2025-04-04 19:26:50,246 | INFO     | chi2: 0.0003500859636960879
[2025-04-04 21:27:11] 2025-04-04 19:26:50,246 | INFO     | -- intersect: -28843160710.511326
[2025-04-04 21:27:11] 2025-04-04 19:26:50,246 | INFO     | current memory leak: 16.54 B/s (using 61 data points, chi2=0.00)
[2025-04-04 21:27:11] 2025-04-04 19:26:50,247 | INFO     | ..............................
[2025-04-04 21:27:11] 2025-04-04 19:26:50,247 | INFO     | . Timing measurements:
[2025-04-04 21:27:11] 2025-04-04 19:26:50,247 | INFO     | . get job = 0 s
[2025-04-04 21:27:11] 2025-04-04 19:26:50,247 | INFO     | . initial setup = 1 s
[2025-04-04 21:27:11] 2025-04-04 19:26:50,247 | INFO     | . payload setup = 8 s
[2025-04-04 21:27:11] 2025-04-04 19:26:50,248 | INFO     | . stage-in = 0 s
[2025-04-04 21:27:11] 2025-04-04 19:26:50,248 | INFO     | . payload execution = 6516 s
[2025-04-04 21:27:11] 2025-04-04 19:26:50,248 | INFO     | . stage-out = 0 s
[2025-04-04 21:27:11] 2025-04-04 19:26:50,248 | INFO     | . log creation = 0 s
[2025-04-04 21:27:11] 2025-04-04 19:26:50,248 | INFO     | ..............................
[2025-04-04 21:27:11] 2025-04-04 19:26:50,347 | INFO     | 
[2025-04-04 21:27:11] 2025-04-04 19:26:50,348 | INFO     | job summary report
[2025-04-04 21:27:11] 2025-04-04 19:26:50,348 | INFO     | --------------------------------------------------
[2025-04-04 21:27:11] 2025-04-04 19:26:50,348 | INFO     | PanDA job id: 6586399102
[2025-04-04 21:27:11] 2025-04-04 19:26:50,348 | INFO     | task id: 43634898
[2025-04-04 21:27:11] 2025-04-04 19:26:50,348 | INFO     | errors: (none)
[2025-04-04 21:27:11] 2025-04-04 19:26:50,348 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 21:27:11] 2025-04-04 19:26:50,348 | INFO     | pilot state: finished 
[2025-04-04 21:27:11] 2025-04-04 19:26:50,348 | INFO     | transexitcode: 0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,348 | INFO     | exeerrorcode: 0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | exeerrordiag: 
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | exitcode: 0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | exitmsg: OK
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | cpuconsumptiontime: 63832 s
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | nevents: 400
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | neventsw: 0
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | pid: 201482
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | pgrp: 201482
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | corecount: 12
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | event service: False
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | sizes: {0: 2417350, 1: 2417350, 7: 2417584, 11: 2417612, 6528: 2444674, 6530: 2453617, 6533: 2453801, 6541: 2453971}
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | --------------------------------------------------
[2025-04-04 21:27:11] 2025-04-04 19:26:50,349 | INFO     | 
[2025-04-04 21:27:11] 2025-04-04 19:26:50,350 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2025-04-04 21:27:11] 2025-04-04 19:26:50,379 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,379 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,380 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,380 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,380 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,380 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,382 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 21:27:11] 2025-04-04 19:26:50,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,382 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 21:27:11] 2025-04-04 19:26:50,382 | INFO     | job 6586399102 has completed (purged errors)
[2025-04-04 21:27:11] 2025-04-04 19:26:50,382 | INFO     | overall cleanup function is called
[2025-04-04 21:27:11] 2025-04-04 19:26:51,392 | INFO     | --- collectZombieJob: --- 10, [201482]
[2025-04-04 21:27:11] 2025-04-04 19:26:51,393 | INFO     | zombie collector waiting for pid 201482
[2025-04-04 21:27:11] 2025-04-04 19:26:51,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 21:27:11] 2025-04-04 19:26:51,393 | INFO     | collected zombie processes
[2025-04-04 21:27:11] 2025-04-04 19:26:51,393 | INFO     | will attempt to kill all subprocesses of pid=201482
[2025-04-04 21:27:11] 2025-04-04 19:26:51,896 | INFO     | process IDs to be killed: [201482] (in reverse order)
[2025-04-04 21:27:11] 2025-04-04 19:26:52,068 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 21:27:11] 2025-04-04 19:26:52,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 21:27:11] 2025-04-04 19:26:52,089 | INFO     | did not find any defunct processes belonging to 201482
[2025-04-04 21:27:11] 2025-04-04 19:26:52,105 | INFO     | did not find any defunct processes belonging to 201482
[2025-04-04 21:27:11] 2025-04-04 19:26:52,106 | INFO     | ready for new job
[2025-04-04 21:27:11] 2025-04-04 19:26:52,106 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 21:27:11] 2025-04-04 19:26:52,107 | INFO     | **************************************
[2025-04-04 21:27:11] 2025-04-04 19:26:52,108 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 21:27:11] 2025-04-04 19:26:52,108 | INFO     | **************************************
[2025-04-04 21:27:11] 2025-04-04 19:26:52,108 | INFO     | 
[2025-04-04 21:27:11] 2025-04-04 19:26:52,114 | INFO     | architecture information:
[2025-04-04 21:27:11] 2025-04-04 19:26:52,114 | INFO     | executing command: cat /etc/os-release
[2025-04-04 21:27:11] 2025-04-04 19:26:52,136 | INFO     | cat /etc/os-release:
[2025-04-04 21:27:11] NAME="CentOS Linux"
[2025-04-04 21:27:11] VERSION="7 (Core)"
[2025-04-04 21:27:11] ID="centos"
[2025-04-04 21:27:11] ID_LIKE="rhel fedora"
[2025-04-04 21:27:11] VERSION_ID="7"
[2025-04-04 21:27:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 21:27:11] ANSI_COLOR="0;31"
[2025-04-04 21:27:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 21:27:11] HOME_URL="https://www.centos.org/"
[2025-04-04 21:27:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 21:27:11] 
[2025-04-04 21:27:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 21:27:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 21:27:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 21:27:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 21:27:11] 
[2025-04-04 21:27:11] 2025-04-04 19:26:52,137 | INFO     | **************************************
[2025-04-04 21:27:11] 2025-04-04 19:26:52,640 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2025-04-04 21:27:11] 2025-04-04 19:26:52,664 | INFO     | sufficient remaining disk space (1677782417408 B)
[2025-04-04 21:27:11] 2025-04-04 19:26:52,665 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 21:27:11] 2025-04-04 19:26:52,665 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 21:27:11] 2025-04-04 19:26:52,665 | INFO     | update_server=False
[2025-04-04 21:27:11] 2025-04-04 19:26:52,665 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 21:27:11] 2025-04-04 19:26:52,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 21:27:11] 2025-04-04 19:26:52,666 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 21:27:11] 2025-04-04 19:26:52,666 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 21:27:11] 2025-04-04 19:26:52,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 21:27:11] 2025-04-04 19:26:52,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 21:27:11] 2025-04-04 19:26:52,673 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-04 21:27:11] 2025-04-04 19:26:52,674 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-04 21:27:11] 2025-04-04 19:26:52,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 21:27:11] 2025-04-04 19:26:52,674 | INFO     | will abort loop
[2025-04-04 21:27:11] 2025-04-04 19:26:52,757 | INFO     | all data control threads have been joined
[2025-04-04 21:27:11] 2025-04-04 19:26:52,970 | INFO     | all job control threads have been joined
[2025-04-04 21:27:11] 2025-04-04 19:26:53,671 | INFO     | [job] retrieve thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:53,679 | INFO     | [job] job monitor thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:53,762 | INFO     | [data] control thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:53,951 | INFO     | all payload control threads have been joined
[2025-04-04 21:27:11] 2025-04-04 19:26:53,975 | INFO     | [job] control thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:54,015 | INFO     | [job] validate thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:54,127 | INFO     | [data] copytool_in thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:54,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 21:27:11] 2025-04-04 19:26:54,430 | INFO     | [payload] validate_post thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:54,458 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:54,518 | INFO     | [payload] failed_post thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:54,807 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:54,812 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:54,956 | INFO     | [payload] control thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:55,359 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 21:27:11] 2025-04-04 19:26:56,166 | INFO     | [data] copytool_out thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:56,364 | INFO     | [job] queue monitor thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:26:56,672 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:27:03,219 | INFO     | job.realtimelogging is not enabled
[2025-04-04 21:27:11] 2025-04-04 19:27:04,225 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 21:27:11] 2025-04-04 19:27:06,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711324542784)>', '<ExcThread(monitor, started 140710837741312)>']
[2025-04-04 21:27:11] 2025-04-04 19:27:06,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 21:27:11] 2025-04-04 19:27:06,736 | INFO     | [monitor] control thread has ended
[2025-04-04 21:27:11] 2025-04-04 19:27:11,095 | INFO     | all workflow threads have been joined
[2025-04-04 21:27:11] 2025-04-04 19:27:11,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 21:27:11] 2025-04-04 19:27:11,095 | INFO     | traces error code: 0
[2025-04-04 21:27:11] 2025-04-04 19:27:11,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 21:27:11] 2025-04-04 19:27:11,253 [wrapper] ==== pilot stdout END ====
[2025-04-04 21:27:11] 2025-04-04 19:27:11,256 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 21:27:11] 2025-04-04 19:27:11,261 [wrapper] pilotpid: 186272
[2025-04-04 21:27:11] 2025-04-04 19:27:11,264 [wrapper] Pilot exit status: 0
[2025-04-04 21:27:11] 2025-04-04 19:27:11,277 [wrapper] pandaids: 6586399102
[2025-04-04 21:27:11] 2025-04-04 19:27:11,390 [wrapper] cleanup supervisor_pilot 1728606 186274
[2025-04-04 21:27:11] 2025-04-04 19:27:11,394 [wrapper] Test setup, not cleaning
[2025-04-04 21:27:11] 2025-04-04 19:27:11,397 [wrapper] apfmon messages muted
[2025-04-04 21:27:11] 2025-04-04 19:27:11,400 [wrapper] ==== wrapper stdout END ====
[2025-04-04 21:27:11] 2025-04-04 19:27:11,403 [wrapper] ==== wrapper stderr END ====
[2025-04-04 21:27:11]  *** Error codes and diagnostics ***
[2025-04-04 21:27:11]     "exeErrorCode": 0,
[2025-04-04 21:27:11]     "exeErrorDiag": "",
[2025-04-04 21:27:11]     "pilotErrorCode": 0,
[2025-04-04 21:27:11]     "pilotErrorDiag": "",
[2025-04-04 21:27:11]  *** Listing of results directory ***
[2025-04-04 21:27:11] total 670932
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc    495897 Apr  4 01:51 pilot3.tar.gz
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc      5111 Apr  4 02:06 queuedata.json
[2025-04-04 21:27:11] -rwx------ 1 boinc boinc     37140 Apr  4 02:08 runpilot2-wrapper.sh
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc       100 Apr  4 19:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 21:27:11] -rwxr-xr-x 1 boinc boinc      7986 Apr  4 19:37 run_atlas
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc       105 Apr  4 19:37 job.xml
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc      6654 Apr  4 19:37 init_data.xml
[2025-04-04 21:27:11] -rw-r--r-- 2 boinc boinc 359668864 Apr  4 19:37 EVNT.43634896._000705.pool.root.1
[2025-04-04 21:27:11] -rw-r--r-- 2 boinc boinc     17569 Apr  4 19:37 start_atlas.sh
[2025-04-04 21:27:11] drwxrwx--x 2 boinc boinc      4096 Apr  4 19:37 shared
[2025-04-04 21:27:11] -rw-r--r-- 2 boinc boinc    508894 Apr  4 19:37 input.tar.gz
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc         0 Apr  4 19:37 boinc_lockfile
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc      2599 Apr  4 19:37 pandaJob.out
[2025-04-04 21:27:11] -rw------- 1 boinc boinc       424 Apr  4 19:37 setup.sh.local
[2025-04-04 21:27:11] -rw------- 1 boinc boinc    979987 Apr  4 19:37 agis_schedconf.cvmfs.json
[2025-04-04 21:27:11] -rw------- 1 boinc boinc   1603525 Apr  4 19:37 agis_ddmendpoints.agis.ALL.json
[2025-04-04 21:27:11] drwx------ 4 boinc boinc      4096 Apr  4 19:37 pilot3
[2025-04-04 21:27:11] -rw------- 1 boinc boinc 321518693 Apr  4 21:25 HITS.43634898._019009.pool.root.1
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc       530 Apr  4 21:25 boinc_task_state.xml
[2025-04-04 21:27:11] -rw------- 1 boinc boinc        95 Apr  4 21:26 pilot_heartbeat.json
[2025-04-04 21:27:11] -rw------- 1 boinc boinc      1024 Apr  4 21:26 memory_monitor_summary.json
[2025-04-04 21:27:11] -rw------- 1 boinc boinc    389389 Apr  4 21:26 log.43634898._019009.job.log.tgz.1
[2025-04-04 21:27:11] -rw------- 1 boinc boinc      7703 Apr  4 21:26 heartbeat.json
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc      8192 Apr  4 21:27 boinc_mmap_file
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc        27 Apr  4 21:27 wrapper_checkpoint.txt
[2025-04-04 21:27:11] -rw------- 1 boinc boinc      4737 Apr  4 21:27 pilotlog.txt
[2025-04-04 21:27:11] -rw------- 1 boinc boinc    614157 Apr  4 21:27 log.43634898._019009.job.log.1
[2025-04-04 21:27:11] -rw------- 1 boinc boinc       357 Apr  4 21:27 output.list
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc       620 Apr  4 21:27 runtime_log
[2025-04-04 21:27:11] -rw------- 1 boinc boinc   1024000 Apr  4 21:27 result.tar.gz
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc     11078 Apr  4 21:27 runtime_log.err
[2025-04-04 21:27:11] -rw------- 1 boinc boinc       664 Apr  4 21:27 Qa4KDmbmjK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmzHILDmeNQUwn.diag
[2025-04-04 21:27:11] -rw-r--r-- 1 boinc boinc     20818 Apr  4 21:27 stderr.txt
[2025-04-04 21:27:11] HITS file was successfully produced:
[2025-04-04 21:27:11] -rw------- 1 boinc boinc 321518693 Apr  4 21:25 shared/HITS.pool.root.1
[2025-04-04 21:27:11]  *** Contents of shared directory: ***
[2025-04-04 21:27:11] total 666752
[2025-04-04 21:27:11] -rw-r--r-- 2 boinc boinc 359668864 Apr  4 19:37 ATLAS.root_0
[2025-04-04 21:27:11] -rw-r--r-- 2 boinc boinc     17569 Apr  4 19:37 start_atlas.sh
[2025-04-04 21:27:11] -rw-r--r-- 2 boinc boinc    508894 Apr  4 19:37 input.tar.gz
[2025-04-04 21:27:11] -rw------- 1 boinc boinc 321518693 Apr  4 21:25 HITS.pool.root.1
[2025-04-04 21:27:11] -rw------- 1 boinc boinc   1024000 Apr  4 21:27 result.tar.gz
21:27:13 (164255): run_atlas exited; CPU time 64084.845149
21:27:13 (164255): called boinc_finish(0)

</stderr_txt>
]]>

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