Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:58:12 (4013713): wrapper (7.7.26015): starting
09:58:12 (4013713): wrapper: running run_atlas (--nthreads 12)
[2025-04-06 09:58:12] Arguments: --nthreads 12
[2025-04-06 09:58:12] Threads: 12
[2025-04-06 09:58:12] Checking for CVMFS
[2025-04-06 09:58:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-06 09:58:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-06 09:58:13] Running cvmfs_config stat atlas.cern.ch
[2025-04-06 09:58:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-06 09:58:13] 2.12.7.0 3477254 1639 64768 144558 1 56 2765738 4096000 0 130560 0 1457929 99.991 425667 2172 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-06 09:58:13] CVMFS is ok
[2025-04-06 09:58:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-06 09:58:13] Checking for apptainer binary...
[2025-04-06 09:58:13] apptainer is not installed, using version from CVMFS
[2025-04-06 09:58:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-06 09:58:13] ryzen7
[2025-04-06 09:58:13] apptainer works
[2025-04-06 09:58:13] Set ATHENA_PROC_NUMBER=12
[2025-04-06 09:58:13] Set ATHENA_CORE_NUMBER=12
[2025-04-06 09:58:13] Starting ATLAS job with PandaID=6586398380
[2025-04-06 09:58:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-06 11:18:17]  *** The last 200 lines of the pilot log: ***
[2025-04-06 11:18:17]  mtime=0
[2025-04-06 11:18:17]  protocol_id=None
[2025-04-06 11:18:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-06 11:18:17]  replicas=None
[2025-04-06 11:18:17]  scope=mc23_13p6TeV
[2025-04-06 11:18:17]  status=None
[2025-04-06 11:18:17]  status_code=0
[2025-04-06 11:18:17]  storage_token=
[2025-04-06 11:18:17]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586398380/log.43634898._018735.job.log.tgz.1
[2025-04-06 11:18:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/cc/log.43634898._018735.job.log.tgz.1
[2025-04-06 11:18:17]  workdir=None
[2025-04-06 11:18:17] ]
[2025-04-06 11:18:17] 2025-04-06 11:17:52,219 | INFO     | transferring file log.43634898._018735.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586398380/log.43634898._018735.job.log.tgz.1 t
[2025-04-06 11:18:17] 2025-04-06 11:17:52,219 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586398380/log.43634898._018735.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-06 11:18:17] 2025-04-06 11:17:52,237 | INFO     | adding to output.list: log.43634898._018735.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/cc/log.43634898._018735.job.log.tg
[2025-04-06 11:18:17] 2025-04-06 11:17:52,238 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-06 11:18:17] 2025-04-06 11:17:52,238 | INFO     | summary of transferred files:
[2025-04-06 11:18:17] 2025-04-06 11:17:52,238 | INFO     |  -- lfn=log.43634898._018735.job.log.tgz.1, status_code=0, status=transferred
[2025-04-06 11:18:17] 2025-04-06 11:17:52,238 | INFO     | stage-out finished correctly
[2025-04-06 11:18:17] 2025-04-06 11:17:52,710 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-06 11:18:17] 2025-04-06 11:17:54,033 | INFO     | monitor loop #358: job 0:6586398380 is in state 'finished'
[2025-04-06 11:18:17] 2025-04-06 11:17:54,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 11:18:17] 2025-04-06 11:17:55,262 | INFO     | job 6586398380 has state=finished
[2025-04-06 11:18:17] 2025-04-06 11:17:55,262 | INFO     | preparing for final server update for job 6586398380 in state='finished'
[2025-04-06 11:18:17] 2025-04-06 11:17:55,262 | INFO     | this job has now completed (state=finished)
[2025-04-06 11:18:17] 2025-04-06 11:17:55,262 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-06 11:18:17] 2025-04-06 11:17:55,262 | INFO     | log transfer has been attempted: DONE
[2025-04-06 11:18:17] 2025-04-06 11:17:55,263 | INFO     | job 6586398380 has finished - writing final server update
[2025-04-06 11:18:17] 2025-04-06 11:17:55,263 | INFO     | total number of processed events: 400 (read)
[2025-04-06 11:18:17] 2025-04-06 11:17:55,283 | INFO     | executing command: lscpu
[2025-04-06 11:18:17] 2025-04-06 11:17:55,298 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-06 11:18:17] 2025-04-06 11:17:56,534 | INFO     | monitor loop #359: job 0:6586398380 is in state 'finished'
[2025-04-06 11:18:17] 2025-04-06 11:17:56,534 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 11:18:17] 2025-04-06 11:17:59,037 | INFO     | monitor loop #360: job 0:6586398380 is in state 'finished'
[2025-04-06 11:18:17] 2025-04-06 11:17:59,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 11:18:17] 2025-04-06 11:18:00,861 | INFO     | PID=4017430 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-06 11:18:17] 2025-04-06 11:18:01,540 | INFO     | monitor loop #361: job 0:6586398380 is in state 'finished'
[2025-04-06 11:18:17] 2025-04-06 11:18:01,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 11:18:17] 2025-04-06 11:18:04,042 | INFO     | monitor loop #362: job 0:6586398380 is in state 'finished'
[2025-04-06 11:18:17] 2025-04-06 11:18:04,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 11:18:17] 2025-04-06 11:18:05,488 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-06 11:18:17] 2025-04-06 11:18:05,488 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586398380/memory_monitor_summary.json (trf name=prmon)
[2025-04-06 11:18:17] 2025-04-06 11:18:05,489 | INFO     | extracted standard info from prmon json
[2025-04-06 11:18:17] 2025-04-06 11:18:05,489 | INFO     | extracted standard memory fields from prmon json
[2025-04-06 11:18:17] 2025-04-06 11:18:05,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-06 11:18:17] 2025-04-06 11:18:05,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-06 11:18:17] 2025-04-06 11:18:05,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-06 11:18:17] 2025-04-06 11:18:05,490 | INFO     | fitting pss+swap vs Time
[2025-04-06 11:18:17] 2025-04-06 11:18:05,490 | INFO     | sum of square deviations: 110960220.0
[2025-04-06 11:18:17] 2025-04-06 11:18:05,490 | INFO     | sum of deviations: 19135224566.0
[2025-04-06 11:18:17] 2025-04-06 11:18:05,490 | INFO     | mean x: 1743935974.0
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | mean y: 2686798.352112676
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | -- intersect: -300741187819.19946
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | intersect: -300741187819.19946
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | chi2: 1.3503006586358066
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | -- intersect: -300741187819.19946
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | current memory leak: 172.45 B/s (using 71 data points, chi2=1.35)
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | ..............................
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | . Timing measurements:
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | . get job = 0 s
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | . initial setup = 1 s
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | . payload setup = 6 s
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | . stage-in = 0 s
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | . payload execution = 4741 s
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | . stage-out = 0 s
[2025-04-06 11:18:17] 2025-04-06 11:18:05,491 | INFO     | . log creation = 0 s
[2025-04-06 11:18:17] 2025-04-06 11:18:05,492 | INFO     | ..............................
[2025-04-06 11:18:17] 2025-04-06 11:18:05,555 | INFO     | 
[2025-04-06 11:18:17] 2025-04-06 11:18:05,555 | INFO     | job summary report
[2025-04-06 11:18:17] 2025-04-06 11:18:05,555 | INFO     | --------------------------------------------------
[2025-04-06 11:18:17] 2025-04-06 11:18:05,555 | INFO     | PanDA job id: 6586398380
[2025-04-06 11:18:17] 2025-04-06 11:18:05,555 | INFO     | task id: 43634898
[2025-04-06 11:18:17] 2025-04-06 11:18:05,555 | INFO     | errors: (none)
[2025-04-06 11:18:17] 2025-04-06 11:18:05,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | pilot state: finished 
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | transexitcode: 0
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | exeerrorcode: 0
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | exeerrordiag: 
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | exitcode: 0
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | exitmsg: OK
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | cpuconsumptiontime: 42902 s
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | nevents: 400
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | neventsw: 0
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | pid: 4023958
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | pgrp: 4023958
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | corecount: 12
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | event service: False
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | sizes: {0: 2417422, 5: 2417628, 11: 2417684, 4751: 2443904, 4752: 2443903, 4753: 2453130, 4766: 2453244}
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | --------------------------------------------------
[2025-04-06 11:18:17] 2025-04-06 11:18:05,556 | INFO     | 
[2025-04-06 11:18:17] 2025-04-06 11:18:05,557 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 11:18:17] 2025-04-06 11:18:05,567 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,567 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,567 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-06 11:18:17] 2025-04-06 11:18:05,568 | INFO     | job 6586398380 has completed (purged errors)
[2025-04-06 11:18:17] 2025-04-06 11:18:05,569 | INFO     | overall cleanup function is called
[2025-04-06 11:18:17] 2025-04-06 11:18:06,574 | INFO     | --- collectZombieJob: --- 10, [4023958]
[2025-04-06 11:18:17] 2025-04-06 11:18:06,574 | INFO     | zombie collector waiting for pid 4023958
[2025-04-06 11:18:17] 2025-04-06 11:18:06,574 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-06 11:18:17] 2025-04-06 11:18:06,574 | INFO     | collected zombie processes
[2025-04-06 11:18:17] 2025-04-06 11:18:06,574 | INFO     | will attempt to kill all subprocesses of pid=4023958
[2025-04-06 11:18:17] 2025-04-06 11:18:06,657 | INFO     | process IDs to be killed: [4023958] (in reverse order)
[2025-04-06 11:18:17] 2025-04-06 11:18:06,689 | WARNING  | found no corresponding commands to process id(s)
[2025-04-06 11:18:17] 2025-04-06 11:18:06,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-06 11:18:17] 2025-04-06 11:18:06,691 | INFO     | did not find any defunct processes belonging to 4023958
[2025-04-06 11:18:17] 2025-04-06 11:18:06,693 | INFO     | did not find any defunct processes belonging to 4023958
[2025-04-06 11:18:17] 2025-04-06 11:18:06,693 | INFO     | ready for new job
[2025-04-06 11:18:17] 2025-04-06 11:18:06,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-06 11:18:17] 2025-04-06 11:18:06,694 | INFO     | **************************************
[2025-04-06 11:18:17] 2025-04-06 11:18:06,694 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-06 11:18:17] 2025-04-06 11:18:06,694 | INFO     | **************************************
[2025-04-06 11:18:17] 2025-04-06 11:18:06,694 | INFO     | 
[2025-04-06 11:18:17] 2025-04-06 11:18:06,714 | INFO     | architecture information:
[2025-04-06 11:18:17] 2025-04-06 11:18:06,715 | INFO     | executing command: cat /etc/os-release
[2025-04-06 11:18:17] 2025-04-06 11:18:06,720 | INFO     | cat /etc/os-release:
[2025-04-06 11:18:17] NAME="CentOS Linux"
[2025-04-06 11:18:17] VERSION="7 (Core)"
[2025-04-06 11:18:17] ID="centos"
[2025-04-06 11:18:17] ID_LIKE="rhel fedora"
[2025-04-06 11:18:17] VERSION_ID="7"
[2025-04-06 11:18:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-06 11:18:17] ANSI_COLOR="0;31"
[2025-04-06 11:18:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-06 11:18:17] HOME_URL="https://www.centos.org/"
[2025-04-06 11:18:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-06 11:18:17] 
[2025-04-06 11:18:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-06 11:18:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-06 11:18:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-06 11:18:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-06 11:18:17] 
[2025-04-06 11:18:17] 2025-04-06 11:18:06,721 | INFO     | **************************************
[2025-04-06 11:18:17] 2025-04-06 11:18:07,222 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 11:18:17] 2025-04-06 11:18:07,229 | INFO     | sufficient remaining disk space (177198858240 B)
[2025-04-06 11:18:17] 2025-04-06 11:18:07,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-06 11:18:17] 2025-04-06 11:18:07,229 | INFO     | current server update state: UPDATING_FINAL
[2025-04-06 11:18:17] 2025-04-06 11:18:07,230 | INFO     | update_server=False
[2025-04-06 11:18:17] 2025-04-06 11:18:07,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-06 11:18:17] 2025-04-06 11:18:07,230 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-06 11:18:17] 2025-04-06 11:18:07,230 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-06 11:18:17] 2025-04-06 11:18:07,230 | INFO     | found 0 job(s) in 20 queues
[2025-04-06 11:18:17] 2025-04-06 11:18:07,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-06 11:18:17] 2025-04-06 11:18:07,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-06 11:18:17] 2025-04-06 11:18:07,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-06 11:18:17] 2025-04-06 11:18:07,546 | INFO     | aborting loop
[2025-04-06 11:18:17] 2025-04-06 11:18:07,750 | INFO     | all data control threads have been joined
[2025-04-06 11:18:17] 2025-04-06 11:18:07,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-06 11:18:17] 2025-04-06 11:18:07,822 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-06 11:18:17] 2025-04-06 11:18:08,234 | INFO     | [job] queue monitor thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:08,234 | INFO     | [job] retrieve thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:08,262 | INFO     | [data] copytool_in thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:08,466 | INFO     | all payload control threads have been joined
[2025-04-06 11:18:17] 2025-04-06 11:18:08,550 | INFO     | [job] job monitor thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:08,646 | INFO     | all job control threads have been joined
[2025-04-06 11:18:17] 2025-04-06 11:18:08,718 | INFO     | [job] create_data_payload thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:08,754 | INFO     | [data] control thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:09,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:09,122 | INFO     | [payload] validate_pre thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:09,286 | INFO     | [job] validate thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:09,470 | INFO     | [payload] failed_post thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:09,470 | INFO     | [payload] control thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:09,522 | INFO     | [payload] execute_payloads thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:09,650 | INFO     | [job] control thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:09,710 | INFO     | [payload] validate_post thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:09,826 | INFO     | [data] copytool_out thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:11,790 | INFO     | [data] queue_monitor thread has finished
[2025-04-06 11:18:17] 2025-04-06 11:18:11,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139879689115456)>', '<ExcThread(monitor, started 139878964655872)>']
[2025-04-06 11:18:17] 2025-04-06 11:18:12,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-06 11:18:17] 2025-04-06 11:18:12,250 | INFO     | [monitor] control thread has ended
[2025-04-06 11:18:17] 2025-04-06 11:18:16,990 | INFO     | all workflow threads have been joined
[2025-04-06 11:18:17] 2025-04-06 11:18:16,990 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-06 11:18:17] 2025-04-06 11:18:16,990 | INFO     | traces error code: 0
[2025-04-06 11:18:17] 2025-04-06 11:18:16,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-06 11:18:17] 2025-04-06 11:18:17,054 [wrapper] ==== pilot stdout END ====
[2025-04-06 11:18:17] 2025-04-06 11:18:17,056 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-06 11:18:17] 2025-04-06 11:18:17,066 [wrapper] pilotpid: 4017430
[2025-04-06 11:18:17] 2025-04-06 11:18:17,071 [wrapper] Pilot exit status: 0
[2025-04-06 11:18:17] 2025-04-06 11:18:17,091 [wrapper] pandaids: 6586398380
[2025-04-06 11:18:17] 2025-04-06 11:18:17,108 [wrapper] cleanup supervisor_pilot 4035711 4017431
[2025-04-06 11:18:17] 2025-04-06 11:18:17,110 [wrapper] Test setup, not cleaning
[2025-04-06 11:18:17] 2025-04-06 11:18:17,111 [wrapper] apfmon messages muted
[2025-04-06 11:18:17] 2025-04-06 11:18:17,113 [wrapper] ==== wrapper stdout END ====
[2025-04-06 11:18:17] 2025-04-06 11:18:17,115 [wrapper] ==== wrapper stderr END ====
[2025-04-06 11:18:17]  *** Error codes and diagnostics ***
[2025-04-06 11:18:17]     "exeErrorCode": 0,
[2025-04-06 11:18:17]     "exeErrorDiag": "",
[2025-04-06 11:18:17]     "pilotErrorCode": 0,
[2025-04-06 11:18:17]     "pilotErrorDiag": "",
[2025-04-06 11:18:17]  *** Listing of results directory ***
[2025-04-06 11:18:17] total 669284
[2025-04-06 11:18:17] -rw-r--r-- 1 boinc boinc    495897 Apr  3 23:12 pilot3.tar.gz
[2025-04-06 11:18:17] -rwx------ 1 boinc boinc     37140 Apr  3 23:26 runpilot2-wrapper.sh
[2025-04-06 11:18:17] -rw-r--r-- 1 boinc boinc      5111 Apr  3 23:26 queuedata.json
[2025-04-06 11:18:17] -rw-rw-r-- 1 boinc boinc       100 Apr  6 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-06 11:18:17] -rwxr-xr-x 1 boinc boinc      7986 Apr  6 09:58 run_atlas
[2025-04-06 11:18:17] -rw-rw-r-- 1 boinc boinc       105 Apr  6 09:58 job.xml
[2025-04-06 11:18:17] -rw-r--r-- 2 boinc boinc     17569 Apr  6 09:58 start_atlas.sh
[2025-04-06 11:18:17] drwxrwx--x 2 boinc boinc      4096 Apr  6 09:58 shared
[2025-04-06 11:18:17] -rw-r--r-- 2 boinc boinc    508888 Apr  6 09:58 input.tar.gz
[2025-04-06 11:18:17] -rw-rw-r-- 1 boinc boinc      9677 Apr  6 09:58 init_data.xml
[2025-04-06 11:18:17] -rw-r--r-- 2 boinc boinc 357868967 Apr  6 09:58 EVNT.43634896._000694.pool.root.1
[2025-04-06 11:18:17] -rw-rw-r-- 1 boinc boinc         0 Apr  6 09:58 boinc_lockfile
[2025-04-06 11:18:17] -rw-rw-r-- 1 boinc boinc      2599 Apr  6 09:58 pandaJob.out
[2025-04-06 11:18:17] -rw------- 1 boinc boinc       424 Apr  6 09:58 setup.sh.local
[2025-04-06 11:18:17] -rw------- 1 boinc boinc    980067 Apr  6 09:58 agis_schedconf.cvmfs.json
[2025-04-06 11:18:17] -rw------- 1 boinc boinc   1603525 Apr  6 09:58 agis_ddmendpoints.agis.ALL.json
[2025-04-06 11:18:17] drwx------ 4 boinc boinc      4096 Apr  6 09:58 pilot3
[2025-04-06 11:18:17] -rw------- 1 boinc boinc        95 Apr  6 11:17 pilot_heartbeat.json
[2025-04-06 11:18:17] -rw-rw-r-- 1 boinc boinc       530 Apr  6 11:17 boinc_task_state.xml
[2025-04-06 11:18:17] -rw------- 1 boinc boinc 321944440 Apr  6 11:17 HITS.43634898._018735.pool.root.1
[2025-04-06 11:18:17] -rw------- 1 boinc boinc      1014 Apr  6 11:17 memory_monitor_summary.json
[2025-04-06 11:18:17] -rw------- 1 boinc boinc    369555 Apr  6 11:17 log.43634898._018735.job.log.tgz.1
[2025-04-06 11:18:17] -rw-rw-r-- 1 boinc boinc      8192 Apr  6 11:18 boinc_mmap_file
[2025-04-06 11:18:17] -rw-rw-r-- 1 boinc boinc        27 Apr  6 11:18 wrapper_checkpoint.txt
[2025-04-06 11:18:17] -rw------- 1 boinc boinc      7646 Apr  6 11:18 heartbeat.json
[2025-04-06 11:18:17] -rw------- 1 boinc boinc      4500 Apr  6 11:18 pilotlog.txt
[2025-04-06 11:18:17] -rw------- 1 boinc boinc    475598 Apr  6 11:18 log.43634898._018735.job.log.1
[2025-04-06 11:18:17] -rw------- 1 boinc boinc       357 Apr  6 11:18 output.list
[2025-04-06 11:18:17] -rw-rw-r-- 1 boinc boinc       620 Apr  6 11:18 runtime_log
[2025-04-06 11:18:17] -rw------- 1 boinc boinc    860160 Apr  6 11:18 result.tar.gz
[2025-04-06 11:18:17] -rw------- 1 boinc boinc       649 Apr  6 11:18 zVLODmT8iK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmsDILDmH1UoUn.diag
[2025-04-06 11:18:17] -rw-rw-r-- 1 boinc boinc     11399 Apr  6 11:18 runtime_log.err
[2025-04-06 11:18:17] -rw-rw-r-- 1 boinc boinc     21602 Apr  6 11:18 stderr.txt
[2025-04-06 11:18:17] HITS file was successfully produced:
[2025-04-06 11:18:17] -rw------- 1 boinc boinc 321944440 Apr  6 11:17 shared/HITS.pool.root.1
[2025-04-06 11:18:17]  *** Contents of shared directory: ***
[2025-04-06 11:18:17] total 665252
[2025-04-06 11:18:17] -rw-r--r-- 2 boinc boinc     17569 Apr  6 09:58 start_atlas.sh
[2025-04-06 11:18:17] -rw-r--r-- 2 boinc boinc    508888 Apr  6 09:58 input.tar.gz
[2025-04-06 11:18:17] -rw-r--r-- 2 boinc boinc 357868967 Apr  6 09:58 ATLAS.root_0
[2025-04-06 11:18:17] -rw------- 1 boinc boinc 321944440 Apr  6 11:17 HITS.pool.root.1
[2025-04-06 11:18:17] -rw------- 1 boinc boinc    860160 Apr  6 11:18 result.tar.gz
11:18:18 (4013713): run_atlas exited; CPU time 42931.323027
11:18:18 (4013713): called boinc_finish(0)

</stderr_txt>
]]>

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