Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:08:35 (77256): wrapper (7.7.26015): starting
05:08:35 (77256): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 05:08:35] Arguments: --nthreads 8
[2025-04-04 05:08:35] Threads: 8
[2025-04-04 05:08:35] Checking for CVMFS
[2025-04-04 05:08:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 05:08:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 05:08:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 05:08:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 05:08:37] 2.11.2.0 46184 2763 170496 144482 3 459 17338767 18432000 22369 130560 0 26436409 98.566 73336602 54596 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-04 05:08:37] CVMFS is ok
[2025-04-04 05:08:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 05:08:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 05:08:37] Further information can be found at the LHC@home message board.
[2025-04-04 05:08:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 05:08:37] Checking for apptainer binary...
[2025-04-04 05:08:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 05:08:37] Running /usr/bin/apptainer --version
[2025-04-04 05:08:37] apptainer version 1.3.2-1.el7
[2025-04-04 05:08:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 05:08:47] c-212-9.aglt2.org
[2025-04-04 05:08:47] apptainer works
[2025-04-04 05:08:47] Set ATHENA_PROC_NUMBER=8
[2025-04-04 05:08:47] Set ATHENA_CORE_NUMBER=8
[2025-04-04 05:08:48] Starting ATLAS job with PandaID=6586399006
[2025-04-04 05:08:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 13:48:12]  *** The last 200 lines of the pilot log: ***
[2025-04-04 13:48:12] 2025-04-04 17:47:51,803 | INFO     | mean y: 2486175.6865079366
[2025-04-04 13:48:12] 2025-04-04 17:47:51,803 | INFO     | -- intersect: -18141059965.74029
[2025-04-04 13:48:12] 2025-04-04 17:47:51,803 | INFO     | intersect: -18141059965.74029
[2025-04-04 13:48:12] 2025-04-04 17:47:51,803 | INFO     | chi2: 10.043433821004916
[2025-04-04 13:48:12] 2025-04-04 17:47:51,804 | INFO     | sum of square deviations: 38527887732.12014
[2025-04-04 13:48:12] 2025-04-04 17:47:51,809 | INFO     | sum of deviations: 476612827067.93616
[2025-04-04 13:48:12] 2025-04-04 17:47:51,809 | INFO     | mean x: 1743773290.0881763
[2025-04-04 13:48:12] 2025-04-04 17:47:51,809 | INFO     | mean y: 2494408.8196392786
[2025-04-04 13:48:12] 2025-04-04 17:47:51,809 | INFO     | -- intersect: -21569015644.70458
[2025-04-04 13:48:12] 2025-04-04 17:47:51,809 | INFO     | intersect: -21569015644.70458
[2025-04-04 13:48:12] 2025-04-04 17:47:51,810 | INFO     | chi2: 8.548630453975568
[2025-04-04 13:48:12] 2025-04-04 17:47:51,810 | INFO     | current chi2=8.548630453975568 (change=14.883389423078638 %)
[2025-04-04 13:48:12] 2025-04-04 17:47:51,810 | INFO     | right removable region: 498
[2025-04-04 13:48:12] 2025-04-04 17:47:51,812 | INFO     | sum of square deviations: 38527860892.12014
[2025-04-04 13:48:12] 2025-04-04 17:47:51,816 | INFO     | sum of deviations: 241673804853.73923
[2025-04-04 13:48:12] 2025-04-04 17:47:51,816 | INFO     | mean x: 1743773595.0881763
[2025-04-04 13:48:12] 2025-04-04 17:47:51,816 | INFO     | mean y: 2508506.1422845693
[2025-04-04 13:48:12] 2025-04-04 17:47:51,816 | INFO     | -- intersect: -10935664280.25901
[2025-04-04 13:48:12] 2025-04-04 17:47:51,816 | INFO     | intersect: -10935664280.25901
[2025-04-04 13:48:12] 2025-04-04 17:47:51,817 | INFO     | chi2: 5.704574184231921
[2025-04-04 13:48:12] 2025-04-04 17:47:51,817 | INFO     | current chi2=5.704574184231921 (change=43.20095809959607 %)
[2025-04-04 13:48:12] 2025-04-04 17:47:51,817 | INFO     | sum of square deviations: 37381249229.58112
[2025-04-04 13:48:12] 2025-04-04 17:47:51,822 | INFO     | sum of deviations: 122865897032.31378
[2025-04-04 13:48:12] 2025-04-04 17:47:51,822 | INFO     | mean x: 1743773747.589069
[2025-04-04 13:48:12] 2025-04-04 17:47:51,822 | INFO     | mean y: 2524303.0951417005
[2025-04-04 13:48:12] 2025-04-04 17:47:51,822 | INFO     | -- intersect: -5728967558.053964
[2025-04-04 13:48:12] 2025-04-04 17:47:51,822 | INFO     | intersect: -5728967558.053964
[2025-04-04 13:48:12] 2025-04-04 17:47:51,823 | INFO     | chi2: 3.7206607728475802
[2025-04-04 13:48:12] 2025-04-04 17:47:51,823 | INFO     | current chi2=3.7206607728475802 (change=34.777589830772975 %)
[2025-04-04 13:48:12] 2025-04-04 17:47:51,824 | INFO     | sum of square deviations: 36257614742.04087
[2025-04-04 13:48:12] 2025-04-04 17:47:51,828 | INFO     | sum of deviations: 16219937474.183956
[2025-04-04 13:48:12] 2025-04-04 17:47:51,828 | INFO     | mean x: 1743773900.0899796
[2025-04-04 13:48:12] 2025-04-04 17:47:51,829 | INFO     | mean y: 2538777.4049079753
[2025-04-04 13:48:12] 2025-04-04 17:47:51,829 | INFO     | -- intersect: -777542974.5195521
[2025-04-04 13:48:12] 2025-04-04 17:47:51,829 | INFO     | intersect: -777542974.5195521
[2025-04-04 13:48:12] 2025-04-04 17:47:51,829 | INFO     | chi2: 2.1450075145289644
[2025-04-04 13:48:12] 2025-04-04 17:47:51,829 | INFO     | current chi2=2.1450075145289644 (change=42.348748099190495 %)
[2025-04-04 13:48:12] 2025-04-04 17:47:51,830 | INFO     | sum of square deviations: 35156724866.99993
[2025-04-04 13:48:12] 2025-04-04 17:47:51,834 | INFO     | sum of deviations: -36859584586.36363
[2025-04-04 13:48:12] 2025-04-04 17:47:51,835 | INFO     | mean x: 1743774052.590909
[2025-04-04 13:48:12] 2025-04-04 17:47:51,835 | INFO     | mean y: 2546110.371900826
[2025-04-04 13:48:12] 2025-04-04 17:47:51,835 | INFO     | -- intersect: 1830782029.2220275
[2025-04-04 13:48:12] 2025-04-04 17:47:51,835 | INFO     | intersect: 1830782029.2220275
[2025-04-04 13:48:12] 2025-04-04 17:47:51,835 | INFO     | chi2: 1.6513695720929162
[2025-04-04 13:48:12] 2025-04-04 17:47:51,836 | INFO     | current chi2=1.6513695720929162 (change=23.013343267678447 %)
[2025-04-04 13:48:12] 2025-04-04 17:47:51,836 | INFO     | left removable region: 40
[2025-04-04 13:48:12] 2025-04-04 17:47:51,836 | INFO     | sum of square deviations: 29789888955.006485
[2025-04-04 13:48:12] 2025-04-04 17:47:51,840 | INFO     | sum of deviations: 21518836817.399586
[2025-04-04 13:48:12] 2025-04-04 17:47:51,841 | INFO     | mean x: 1743774479.5873363
[2025-04-04 13:48:12] 2025-04-04 17:47:51,841 | INFO     | mean y: 2556194.827510917
[2025-04-04 13:48:12] 2025-04-04 17:47:51,841 | INFO     | -- intersect: -1257065770.5064518
[2025-04-04 13:48:12] 2025-04-04 17:47:51,841 | INFO     | intersect: -1257065770.5064518
[2025-04-04 13:48:12] 2025-04-04 17:47:51,841 | INFO     | chi2: 0.01273171543370926
[2025-04-04 13:48:12] 2025-04-04 17:47:51,841 | INFO     | -- intersect: -1257065770.5064518
[2025-04-04 13:48:12] 2025-04-04 17:47:51,842 | INFO     | current memory leak: 0.72 B/s (using 458 data points, chi2=0.01)
[2025-04-04 13:48:12] 2025-04-04 17:47:51,843 | INFO     | ..............................
[2025-04-04 13:48:12] 2025-04-04 17:47:51,843 | INFO     | . Timing measurements:
[2025-04-04 13:48:12] 2025-04-04 17:47:51,843 | INFO     | . get job = 0 s
[2025-04-04 13:48:12] 2025-04-04 17:47:51,843 | INFO     | . initial setup = 5 s
[2025-04-04 13:48:12] 2025-04-04 17:47:51,843 | INFO     | . payload setup = 72 s
[2025-04-04 13:48:12] 2025-04-04 17:47:51,843 | INFO     | . stage-in = 0 s
[2025-04-04 13:48:12] 2025-04-04 17:47:51,843 | INFO     | . payload execution = 30771 s
[2025-04-04 13:48:12] 2025-04-04 17:47:51,843 | INFO     | . stage-out = 6 s
[2025-04-04 13:48:12] 2025-04-04 17:47:51,843 | INFO     | . log creation = 1 s
[2025-04-04 13:48:12] 2025-04-04 17:47:51,843 | INFO     | ..............................
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | 
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | job summary report
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | --------------------------------------------------
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | PanDA job id: 6586399006
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | task id: 43634898
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | errors: (none)
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | pilot state: finished 
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | transexitcode: 0
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | exeerrorcode: 0
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | exeerrordiag: 
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | exitcode: 0
[2025-04-04 13:48:12] 2025-04-04 17:47:51,983 | INFO     | exitmsg: OK
[2025-04-04 13:48:12] 2025-04-04 17:47:51,984 | INFO     | cpuconsumptiontime: 71097 s
[2025-04-04 13:48:12] 2025-04-04 17:47:51,984 | INFO     | nevents: 400
[2025-04-04 13:48:12] 2025-04-04 17:47:51,984 | INFO     | neventsw: 0
[2025-04-04 13:48:12] 2025-04-04 17:47:51,984 | INFO     | pid: 57893
[2025-04-04 13:48:12] 2025-04-04 17:47:51,984 | INFO     | pgrp: 57893
[2025-04-04 13:48:12] 2025-04-04 17:47:51,984 | INFO     | corecount: 8
[2025-04-04 13:48:12] 2025-04-04 17:47:51,984 | INFO     | event service: False
[2025-04-04 13:48:12] 2025-04-04 17:47:51,984 | INFO     | sizes: {0: 2417172, 1: 2417427, 2: 2417427, 12: 2417455, 23: 2417483, 34: 2417511, 45: 2417667, 46: 2417901, 55: 2417929, 30848: 2455577, 30856: 2464518, 30858: 24
[2025-04-04 13:48:12] 2025-04-04 17:47:51,984 | INFO     | --------------------------------------------------
[2025-04-04 13:48:12] 2025-04-04 17:47:51,984 | INFO     | 
[2025-04-04 13:48:12] 2025-04-04 17:47:51,984 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-04-04 13:48:12] 2025-04-04 17:47:52,203 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,203 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,205 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 13:48:12] 2025-04-04 17:47:52,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,205 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 13:48:12] 2025-04-04 17:47:52,205 | INFO     | job 6586399006 has completed (purged errors)
[2025-04-04 13:48:12] 2025-04-04 17:47:52,205 | INFO     | overall cleanup function is called
[2025-04-04 13:48:12] 2025-04-04 17:47:53,218 | INFO     | --- collectZombieJob: --- 10, [57893]
[2025-04-04 13:48:12] 2025-04-04 17:47:53,219 | INFO     | zombie collector waiting for pid 57893
[2025-04-04 13:48:12] 2025-04-04 17:47:53,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 13:48:12] 2025-04-04 17:47:53,219 | INFO     | collected zombie processes
[2025-04-04 13:48:12] 2025-04-04 17:47:53,219 | INFO     | will attempt to kill all subprocesses of pid=57893
[2025-04-04 13:48:12] 2025-04-04 17:47:54,399 | INFO     | process IDs to be killed: [57893] (in reverse order)
[2025-04-04 13:48:12] 2025-04-04 17:47:55,390 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 13:48:12] 2025-04-04 17:47:55,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 13:48:12] 2025-04-04 17:47:55,462 | INFO     | did not find any defunct processes belonging to 57893
[2025-04-04 13:48:12] 2025-04-04 17:47:55,584 | INFO     | did not find any defunct processes belonging to 57893
[2025-04-04 13:48:12] 2025-04-04 17:47:55,585 | INFO     | ready for new job
[2025-04-04 13:48:12] 2025-04-04 17:47:55,585 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 13:48:12] 2025-04-04 17:47:55,592 | INFO     | **************************************
[2025-04-04 13:48:12] 2025-04-04 17:47:55,592 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 13:48:12] 2025-04-04 17:47:55,592 | INFO     | **************************************
[2025-04-04 13:48:12] 2025-04-04 17:47:55,592 | INFO     | 
[2025-04-04 13:48:12] 2025-04-04 17:47:55,603 | INFO     | architecture information:
[2025-04-04 13:48:12] 2025-04-04 17:47:55,606 | INFO     | executing command: cat /etc/os-release
[2025-04-04 13:48:12] 2025-04-04 17:47:55,764 | INFO     | cat /etc/os-release:
[2025-04-04 13:48:12] NAME="CentOS Linux"
[2025-04-04 13:48:12] VERSION="7 (Core)"
[2025-04-04 13:48:12] ID="centos"
[2025-04-04 13:48:12] ID_LIKE="rhel fedora"
[2025-04-04 13:48:12] VERSION_ID="7"
[2025-04-04 13:48:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 13:48:12] ANSI_COLOR="0;31"
[2025-04-04 13:48:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 13:48:12] HOME_URL="https://www.centos.org/"
[2025-04-04 13:48:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 13:48:12] 
[2025-04-04 13:48:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 13:48:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 13:48:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 13:48:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 13:48:12] 
[2025-04-04 13:48:12] 2025-04-04 17:47:55,764 | INFO     | **************************************
[2025-04-04 13:48:12] 2025-04-04 17:47:56,145 | INFO     | PID=95846 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-04 13:48:12] 2025-04-04 17:47:56,145 | INFO     | .. there are 26 such processes running
[2025-04-04 13:48:12] 2025-04-04 17:47:56,268 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-04-04 13:48:12] 2025-04-04 17:47:56,385 | INFO     | sufficient remaining disk space (104226357248 B)
[2025-04-04 13:48:12] 2025-04-04 17:47:56,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 13:48:12] 2025-04-04 17:47:56,386 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 13:48:12] 2025-04-04 17:47:56,386 | INFO     | update_server=False
[2025-04-04 13:48:12] 2025-04-04 17:47:56,386 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 13:48:12] 2025-04-04 17:47:56,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 13:48:12] 2025-04-04 17:47:56,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 13:48:12] 2025-04-04 17:47:56,387 | INFO     | aborting loop
[2025-04-04 13:48:12] 2025-04-04 17:47:56,387 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 13:48:12] 2025-04-04 17:47:56,387 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 13:48:12] 2025-04-04 17:47:56,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 13:48:12] 2025-04-04 17:47:56,387 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 13:48:12] 2025-04-04 17:47:56,470 | INFO     | all payload control threads have been joined
[2025-04-04 13:48:12] 2025-04-04 17:47:56,481 | INFO     | all job control threads have been joined
[2025-04-04 13:48:12] 2025-04-04 17:47:56,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 13:48:12] 2025-04-04 17:47:57,338 | INFO     | all data control threads have been joined
[2025-04-04 13:48:12] 2025-04-04 17:47:57,392 | INFO     | [job] retrieve thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:57,396 | INFO     | [job] job monitor thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:57,447 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:57,476 | INFO     | [payload] control thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:57,498 | INFO     | [job] control thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:57,753 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:57,756 | INFO     | [job] validate thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:57,998 | INFO     | [job] queue monitor thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:58,069 | INFO     | [payload] failed_post thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:58,253 | INFO     | [payload] validate_post thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:58,294 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:58,350 | INFO     | [data] control thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:58,394 | INFO     | [data] copytool_out thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:58,497 | INFO     | [data] copytool_in thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:58,596 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:47:58,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 13:48:12] 2025-04-04 17:48:02,802 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 13:48:12] 2025-04-04 17:48:03,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728032327488)>', '<ExcThread(monitor, started 139727718029056)>']
[2025-04-04 13:48:12] 2025-04-04 17:48:04,441 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 13:48:12] 2025-04-04 17:48:04,441 | INFO     | [monitor] control thread has ended
[2025-04-04 13:48:12] 2025-04-04 17:48:08,642 | INFO     | all workflow threads have been joined
[2025-04-04 13:48:12] 2025-04-04 17:48:08,643 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 13:48:12] 2025-04-04 17:48:08,643 | INFO     | traces error code: 0
[2025-04-04 13:48:12] 2025-04-04 17:48:08,643 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 13:48:12] 2025-04-04 17:48:09,291 [wrapper] ==== pilot stdout END ====
[2025-04-04 13:48:12] 2025-04-04 17:48:09,324 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 13:48:12] 2025-04-04 17:48:09,349 [wrapper] pilotpid: 95846
[2025-04-04 13:48:12] 2025-04-04 17:48:09,375 [wrapper] Pilot exit status: 0
[2025-04-04 13:48:12] 2025-04-04 17:48:09,577 [wrapper] pandaids: 6586399006
[2025-04-04 13:48:12] 2025-04-04 17:48:09,885 [wrapper] cleanup supervisor_pilot 16399 95847
[2025-04-04 13:48:12] 2025-04-04 17:48:09,927 [wrapper] Test setup, not cleaning
[2025-04-04 13:48:12] 2025-04-04 17:48:10,013 [wrapper] apfmon messages muted
[2025-04-04 13:48:12] 2025-04-04 17:48:10,057 [wrapper] ==== wrapper stdout END ====
[2025-04-04 13:48:12] 2025-04-04 17:48:10,097 [wrapper] ==== wrapper stderr END ====
[2025-04-04 13:48:12]  *** Error codes and diagnostics ***
[2025-04-04 13:48:12]     "exeErrorCode": 0,
[2025-04-04 13:48:12]     "exeErrorDiag": "",
[2025-04-04 13:48:12]     "pilotErrorCode": 0,
[2025-04-04 13:48:12]     "pilotErrorDiag": "",
[2025-04-04 13:48:12]  *** Listing of results directory ***
[2025-04-04 13:48:12] total 676204
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas    495897 Apr  3 19:51 pilot3.tar.gz
[2025-04-04 13:48:12] -rwx------ 1 boincer umatlas     37140 Apr  3 19:53 runpilot2-wrapper.sh
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas      5111 Apr  3 19:53 queuedata.json
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas       100 Apr  4 05:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 13:48:12] -rwxr-xr-x 1 boincer umatlas      7986 Apr  4 05:08 run_atlas
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas       105 Apr  4 05:08 job.xml
[2025-04-04 13:48:12] -rw-r--r-- 2 boincer umatlas 359060244 Apr  4 05:08 EVNT.43634896._000701.pool.root.1
[2025-04-04 13:48:12] -rw-r--r-- 2 boincer umatlas     17569 Apr  4 05:08 start_atlas.sh
[2025-04-04 13:48:12] drwxrwx--x 2 boincer umatlas      4096 Apr  4 05:08 shared
[2025-04-04 13:48:12] -rw-r--r-- 2 boincer umatlas    508886 Apr  4 05:08 input.tar.gz
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas         0 Apr  4 05:08 boinc_lockfile
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas      2599 Apr  4 05:08 pandaJob.out
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas       424 Apr  4 05:09 setup.sh.local
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas    979986 Apr  4 05:10 agis_schedconf.cvmfs.json
[2025-04-04 13:48:12] drwx------ 4 boincer umatlas      4096 Apr  4 05:10 pilot3
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas      6303 Apr  4 13:37 init_data.xml
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas 323386056 Apr  4 13:44 HITS.43634898._018914.pool.root.1
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas       532 Apr  4 13:45 boinc_task_state.xml
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas      1090 Apr  4 13:46 memory_monitor_summary.json
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas   1603525 Apr  4 13:46 agis_ddmendpoints.agis.ALL.json
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas    562568 Apr  4 13:46 log.43634898._018914.job.log.tgz.1
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas        95 Apr  4 13:47 pilot_heartbeat.json
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas      7760 Apr  4 13:47 heartbeat.json
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas      8192 Apr  4 13:47 boinc_mmap_file
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas        28 Apr  4 13:47 wrapper_checkpoint.txt
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas      4870 Apr  4 13:48 pilotlog.txt
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas   2508317 Apr  4 13:48 log.43634898._018914.job.log.1
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas       357 Apr  4 13:48 output.list
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas       620 Apr  4 13:48 runtime_log
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas   3092480 Apr  4 13:48 result.tar.gz
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas       663 Apr  4 13:48 SiWNDm7XjK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmBGILDmH3KKOo.diag
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas     11009 Apr  4 13:48 runtime_log.err
[2025-04-04 13:48:12] -rw-r--r-- 1 boincer umatlas     21006 Apr  4 13:48 stderr.txt
[2025-04-04 13:48:12] HITS file was successfully produced:
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas 323386056 Apr  4 13:44 shared/HITS.pool.root.1
[2025-04-04 13:48:12]  *** Contents of shared directory: ***
[2025-04-04 13:48:12] total 670004
[2025-04-04 13:48:12] -rw-r--r-- 2 boincer umatlas 359060244 Apr  4 05:08 ATLAS.root_0
[2025-04-04 13:48:12] -rw-r--r-- 2 boincer umatlas     17569 Apr  4 05:08 start_atlas.sh
[2025-04-04 13:48:12] -rw-r--r-- 2 boincer umatlas    508886 Apr  4 05:08 input.tar.gz
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas 323386056 Apr  4 13:44 HITS.pool.root.1
[2025-04-04 13:48:12] -rw------- 1 boincer umatlas   3092480 Apr  4 13:48 result.tar.gz
13:48:14 (77256): run_atlas exited; CPU time 70358.204619
13:48:14 (77256): called boinc_finish(0)

</stderr_txt>
]]>

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