Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:48:57 (3967171): wrapper (7.7.26015): starting
07:48:57 (3967171): wrapper: running run_atlas (--nthreads 12)
[2025-04-06 07:48:57] Arguments: --nthreads 12
[2025-04-06 07:48:57] Threads: 12
[2025-04-06 07:48:57] Checking for CVMFS
[2025-04-06 07:48:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-06 07:48:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-06 07:48:57] Running cvmfs_config stat atlas.cern.ch
[2025-04-06 07:48:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-06 07:48:57] 2.12.7.0 3477254 1510 64340 144555 2 56 2615090 4096000 0 130560 0 1334428 99.992 358952 1917 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-06 07:48:57] CVMFS is ok
[2025-04-06 07:48:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-06 07:48:57] Checking for apptainer binary...
[2025-04-06 07:48:57] apptainer is not installed, using version from CVMFS
[2025-04-06 07:48:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-06 07:48:58] ryzen7
[2025-04-06 07:48:58] apptainer works
[2025-04-06 07:48:58] Set ATHENA_PROC_NUMBER=12
[2025-04-06 07:48:58] Set ATHENA_CORE_NUMBER=12
[2025-04-06 07:48:58] Starting ATLAS job with PandaID=6585410078
[2025-04-06 07:48:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-06 08:37:28]  *** The last 200 lines of the pilot log: ***
[2025-04-06 08:37:28]  mtime=0
[2025-04-06 08:37:28]  protocol_id=None
[2025-04-06 08:37:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-06 08:37:28]  replicas=None
[2025-04-06 08:37:28]  scope=mc23_13p6TeV
[2025-04-06 08:37:28]  status=None
[2025-04-06 08:37:28]  status_code=0
[2025-04-06 08:37:28]  storage_token=
[2025-04-06 08:37:28]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6585410078/log.44004367._010246.job.log.tgz.1
[2025-04-06 08:37:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/dc/log.44004367._010246.job.log.tgz.1
[2025-04-06 08:37:28]  workdir=None
[2025-04-06 08:37:28] ]
[2025-04-06 08:37:28] 2025-04-06 08:37:05,762 | INFO     | transferring file log.44004367._010246.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6585410078/log.44004367._010246.job.log.tgz.1 t
[2025-04-06 08:37:28] 2025-04-06 08:37:05,762 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6585410078/log.44004367._010246.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-06 08:37:28] 2025-04-06 08:37:05,773 | INFO     | adding to output.list: log.44004367._010246.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/dc/log.44004367._010246.job.log.tg
[2025-04-06 08:37:28] 2025-04-06 08:37:05,773 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-06 08:37:28] 2025-04-06 08:37:05,773 | INFO     | summary of transferred files:
[2025-04-06 08:37:28] 2025-04-06 08:37:05,773 | INFO     |  -- lfn=log.44004367._010246.job.log.tgz.1, status_code=0, status=transferred
[2025-04-06 08:37:28] 2025-04-06 08:37:05,773 | INFO     | stage-out finished correctly
[2025-04-06 08:37:28] 2025-04-06 08:37:05,912 | WARNING  | process 3977413 can no longer be monitored (due to stat problems) - aborting
[2025-04-06 08:37:28] 2025-04-06 08:37:05,912 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6585410078/memory_monitor_summary.json (trf name=prmon)
[2025-04-06 08:37:28] 2025-04-06 08:37:05,980 | INFO     | number of running child processes to parent process 3977413: 1
[2025-04-06 08:37:28] 2025-04-06 08:37:05,980 | INFO     | maximum number of monitored processes: 6
[2025-04-06 08:37:28] 2025-04-06 08:37:08,482 | INFO     | monitor loop #218: job 0:6585410078 is in state 'finished'
[2025-04-06 08:37:28] 2025-04-06 08:37:08,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 08:37:28] 2025-04-06 08:37:08,809 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-06 08:37:28] 2025-04-06 08:37:08,861 | INFO     | job 6585410078 has state=finished
[2025-04-06 08:37:28] 2025-04-06 08:37:08,861 | INFO     | preparing for final server update for job 6585410078 in state='finished'
[2025-04-06 08:37:28] 2025-04-06 08:37:08,862 | INFO     | this job has now completed (state=finished)
[2025-04-06 08:37:28] 2025-04-06 08:37:08,862 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-06 08:37:28] 2025-04-06 08:37:08,862 | INFO     | log transfer has been attempted: DONE
[2025-04-06 08:37:28] 2025-04-06 08:37:08,862 | INFO     | job 6585410078 has finished - writing final server update
[2025-04-06 08:37:28] 2025-04-06 08:37:08,862 | INFO     | total number of processed events: 400 (read)
[2025-04-06 08:37:28] 2025-04-06 08:37:08,883 | INFO     | executing command: lscpu
[2025-04-06 08:37:28] 2025-04-06 08:37:08,896 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-06 08:37:28] 2025-04-06 08:37:10,985 | INFO     | monitor loop #219: job 0:6585410078 is in state 'finished'
[2025-04-06 08:37:28] 2025-04-06 08:37:10,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 08:37:28] 2025-04-06 08:37:13,486 | INFO     | monitor loop #220: job 0:6585410078 is in state 'finished'
[2025-04-06 08:37:28] 2025-04-06 08:37:13,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 08:37:28] 2025-04-06 08:37:14,685 | INFO     | PID=3970884 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-06 08:37:28] 2025-04-06 08:37:15,674 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-06 08:37:28] 2025-04-06 08:37:15,674 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6585410078/memory_monitor_summary.json (trf name=prmon)
[2025-04-06 08:37:28] 2025-04-06 08:37:15,675 | INFO     | extracted standard info from prmon json
[2025-04-06 08:37:28] 2025-04-06 08:37:15,675 | INFO     | extracted standard memory fields from prmon json
[2025-04-06 08:37:28] 2025-04-06 08:37:15,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-06 08:37:28] 2025-04-06 08:37:15,675 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-06 08:37:28] 2025-04-06 08:37:15,675 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-06 08:37:28] 2025-04-06 08:37:15,676 | INFO     | fitting pss+swap vs Time
[2025-04-06 08:37:28] 2025-04-06 08:37:15,676 | INFO     | sum of square deviations: 19832930.0
[2025-04-06 08:37:28] 2025-04-06 08:37:15,676 | INFO     | sum of deviations: 5331879246.499999
[2025-04-06 08:37:28] 2025-04-06 08:37:15,676 | INFO     | mean x: 1743927269.5
[2025-04-06 08:37:28] 2025-04-06 08:37:15,676 | INFO     | mean y: 2678557.525
[2025-04-06 08:37:28] 2025-04-06 08:37:15,676 | INFO     | -- intersect: -468834231352.0274
[2025-04-06 08:37:28] 2025-04-06 08:37:15,676 | INFO     | intersect: -468834231352.0274
[2025-04-06 08:37:28] 2025-04-06 08:37:15,676 | INFO     | chi2: 1.4666498383046092
[2025-04-06 08:37:28] 2025-04-06 08:37:15,676 | INFO     | -- intersect: -468834231352.0274
[2025-04-06 08:37:28] 2025-04-06 08:37:15,676 | INFO     | current memory leak: 268.84 B/s (using 40 data points, chi2=1.47)
[2025-04-06 08:37:28] 2025-04-06 08:37:15,677 | INFO     | ..............................
[2025-04-06 08:37:28] 2025-04-06 08:37:15,677 | INFO     | . Timing measurements:
[2025-04-06 08:37:28] 2025-04-06 08:37:15,677 | INFO     | . get job = 0 s
[2025-04-06 08:37:28] 2025-04-06 08:37:15,677 | INFO     | . initial setup = 1 s
[2025-04-06 08:37:28] 2025-04-06 08:37:15,677 | INFO     | . payload setup = 5 s
[2025-04-06 08:37:28] 2025-04-06 08:37:15,677 | INFO     | . stage-in = 0 s
[2025-04-06 08:37:28] 2025-04-06 08:37:15,677 | INFO     | . payload execution = 2853 s
[2025-04-06 08:37:28] 2025-04-06 08:37:15,677 | INFO     | . stage-out = 0 s
[2025-04-06 08:37:28] 2025-04-06 08:37:15,677 | INFO     | . log creation = 0 s
[2025-04-06 08:37:28] 2025-04-06 08:37:15,677 | INFO     | ..............................
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | 
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | job summary report
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | --------------------------------------------------
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | PanDA job id: 6585410078
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | task id: 44004367
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | errors: (none)
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | pilot state: finished 
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | transexitcode: 0
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | exeerrorcode: 0
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | exeerrordiag: 
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | exitcode: 0
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | exitmsg: OK
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | cpuconsumptiontime: 23365 s
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | nevents: 400
[2025-04-06 08:37:28] 2025-04-06 08:37:15,733 | INFO     | neventsw: 0
[2025-04-06 08:37:28] 2025-04-06 08:37:15,734 | INFO     | pid: 3977413
[2025-04-06 08:37:28] 2025-04-06 08:37:15,734 | INFO     | pgrp: 3977413
[2025-04-06 08:37:28] 2025-04-06 08:37:15,734 | INFO     | corecount: 12
[2025-04-06 08:37:28] 2025-04-06 08:37:15,734 | INFO     | event service: False
[2025-04-06 08:37:28] 2025-04-06 08:37:15,734 | INFO     | sizes: {0: 2417299, 5: 2417505, 11: 2417561, 2862: 2442760, 2863: 2451747, 2866: 2451803, 2873: 2452101}
[2025-04-06 08:37:28] 2025-04-06 08:37:15,734 | INFO     | --------------------------------------------------
[2025-04-06 08:37:28] 2025-04-06 08:37:15,734 | INFO     | 
[2025-04-06 08:37:28] 2025-04-06 08:37:15,734 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 08:37:28] 2025-04-06 08:37:15,744 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,744 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,744 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-06 08:37:28] 2025-04-06 08:37:15,745 | INFO     | job 6585410078 has completed (purged errors)
[2025-04-06 08:37:28] 2025-04-06 08:37:15,746 | INFO     | overall cleanup function is called
[2025-04-06 08:37:28] 2025-04-06 08:37:16,750 | INFO     | --- collectZombieJob: --- 10, [3977413]
[2025-04-06 08:37:28] 2025-04-06 08:37:16,750 | INFO     | zombie collector waiting for pid 3977413
[2025-04-06 08:37:28] 2025-04-06 08:37:16,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-06 08:37:28] 2025-04-06 08:37:16,750 | INFO     | collected zombie processes
[2025-04-06 08:37:28] 2025-04-06 08:37:16,750 | INFO     | will attempt to kill all subprocesses of pid=3977413
[2025-04-06 08:37:28] 2025-04-06 08:37:16,835 | INFO     | process IDs to be killed: [3977413] (in reverse order)
[2025-04-06 08:37:28] 2025-04-06 08:37:16,863 | WARNING  | found no corresponding commands to process id(s)
[2025-04-06 08:37:28] 2025-04-06 08:37:16,863 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-06 08:37:28] 2025-04-06 08:37:16,865 | INFO     | did not find any defunct processes belonging to 3977413
[2025-04-06 08:37:28] 2025-04-06 08:37:16,867 | INFO     | did not find any defunct processes belonging to 3977413
[2025-04-06 08:37:28] 2025-04-06 08:37:16,867 | INFO     | ready for new job
[2025-04-06 08:37:28] 2025-04-06 08:37:16,867 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-06 08:37:28] 2025-04-06 08:37:16,868 | INFO     | **************************************
[2025-04-06 08:37:28] 2025-04-06 08:37:16,868 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-06 08:37:28] 2025-04-06 08:37:16,868 | INFO     | **************************************
[2025-04-06 08:37:28] 2025-04-06 08:37:16,868 | INFO     | 
[2025-04-06 08:37:28] 2025-04-06 08:37:16,886 | INFO     | architecture information:
[2025-04-06 08:37:28] 2025-04-06 08:37:16,887 | INFO     | executing command: cat /etc/os-release
[2025-04-06 08:37:28] 2025-04-06 08:37:16,893 | INFO     | cat /etc/os-release:
[2025-04-06 08:37:28] NAME="CentOS Linux"
[2025-04-06 08:37:28] VERSION="7 (Core)"
[2025-04-06 08:37:28] ID="centos"
[2025-04-06 08:37:28] ID_LIKE="rhel fedora"
[2025-04-06 08:37:28] VERSION_ID="7"
[2025-04-06 08:37:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-06 08:37:28] ANSI_COLOR="0;31"
[2025-04-06 08:37:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-06 08:37:28] HOME_URL="https://www.centos.org/"
[2025-04-06 08:37:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-06 08:37:28] 
[2025-04-06 08:37:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-06 08:37:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-06 08:37:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-06 08:37:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-06 08:37:28] 
[2025-04-06 08:37:28] 2025-04-06 08:37:16,894 | INFO     | **************************************
[2025-04-06 08:37:28] 2025-04-06 08:37:17,394 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 08:37:28] 2025-04-06 08:37:17,401 | INFO     | sufficient remaining disk space (177120215040 B)
[2025-04-06 08:37:28] 2025-04-06 08:37:17,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-06 08:37:28] 2025-04-06 08:37:17,401 | INFO     | current server update state: UPDATING_FINAL
[2025-04-06 08:37:28] 2025-04-06 08:37:17,402 | INFO     | update_server=False
[2025-04-06 08:37:28] 2025-04-06 08:37:17,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-06 08:37:28] 2025-04-06 08:37:17,402 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-06 08:37:28] 2025-04-06 08:37:17,402 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-06 08:37:28] 2025-04-06 08:37:17,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-06 08:37:28] 2025-04-06 08:37:17,402 | INFO     | found 0 job(s) in 20 queues
[2025-04-06 08:37:28] 2025-04-06 08:37:17,402 | INFO     | aborting loop
[2025-04-06 08:37:28] 2025-04-06 08:37:17,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-06 08:37:28] 2025-04-06 08:37:17,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-06 08:37:28] 2025-04-06 08:37:17,577 | INFO     | all job control threads have been joined
[2025-04-06 08:37:28] 2025-04-06 08:37:18,394 | INFO     | all payload control threads have been joined
[2025-04-06 08:37:28] 2025-04-06 08:37:18,406 | INFO     | [job] job monitor thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:18,406 | INFO     | [job] queue monitor thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:18,406 | INFO     | [job] retrieve thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:18,413 | INFO     | all data control threads have been joined
[2025-04-06 08:37:28] 2025-04-06 08:37:18,422 | INFO     | [job] validate thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:18,542 | INFO     | [payload] validate_post thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:18,582 | INFO     | [job] control thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:18,806 | INFO     | [job] create_data_payload thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:18,818 | INFO     | [payload] validate_pre thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:18,846 | INFO     | [data] copytool_in thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:18,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-06 08:37:28] 2025-04-06 08:37:19,198 | INFO     | [payload] execute_payloads thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:19,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-06 08:37:28] 2025-04-06 08:37:19,398 | INFO     | [payload] control thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:19,418 | INFO     | [data] control thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:19,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:19,838 | INFO     | [payload] failed_post thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:20,854 | INFO     | [data] copytool_out thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:23,374 | INFO     | [data] queue_monitor thread has finished
[2025-04-06 08:37:28] 2025-04-06 08:37:23,638 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711701899072)>', '<ExcThread(monitor, started 140711030675200)>']
[2025-04-06 08:37:28] 2025-04-06 08:37:24,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-06 08:37:28] 2025-04-06 08:37:24,430 | INFO     | [monitor] control thread has ended
[2025-04-06 08:37:28] 2025-04-06 08:37:28,662 | INFO     | all workflow threads have been joined
[2025-04-06 08:37:28] 2025-04-06 08:37:28,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-06 08:37:28] 2025-04-06 08:37:28,662 | INFO     | traces error code: 0
[2025-04-06 08:37:28] 2025-04-06 08:37:28,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-06 08:37:28] 2025-04-06 08:37:28,712 [wrapper] ==== pilot stdout END ====
[2025-04-06 08:37:28] 2025-04-06 08:37:28,715 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-06 08:37:28] 2025-04-06 08:37:28,719 [wrapper] pilotpid: 3970884
[2025-04-06 08:37:28] 2025-04-06 08:37:28,721 [wrapper] Pilot exit status: 0
[2025-04-06 08:37:28] 2025-04-06 08:37:28,731 [wrapper] pandaids: 6585410078
[2025-04-06 08:37:28] 2025-04-06 08:37:28,751 [wrapper] cleanup supervisor_pilot 3986609 3970885
[2025-04-06 08:37:28] 2025-04-06 08:37:28,752 [wrapper] Test setup, not cleaning
[2025-04-06 08:37:28] 2025-04-06 08:37:28,755 [wrapper] apfmon messages muted
[2025-04-06 08:37:28] 2025-04-06 08:37:28,757 [wrapper] ==== wrapper stdout END ====
[2025-04-06 08:37:28] 2025-04-06 08:37:28,759 [wrapper] ==== wrapper stderr END ====
[2025-04-06 08:37:28]  *** Error codes and diagnostics ***
[2025-04-06 08:37:28]     "exeErrorCode": 0,
[2025-04-06 08:37:28]     "exeErrorDiag": "",
[2025-04-06 08:37:28]     "pilotErrorCode": 0,
[2025-04-06 08:37:28]     "pilotErrorDiag": "",
[2025-04-06 08:37:28]  *** Listing of results directory ***
[2025-04-06 08:37:28] total 408172
[2025-04-06 08:37:28] -rw-r--r-- 1 boinc boinc    495897 Apr  3 14:28 pilot3.tar.gz
[2025-04-06 08:37:28] -rwx------ 1 boinc boinc     37140 Apr  3 14:33 runpilot2-wrapper.sh
[2025-04-06 08:37:28] -rw-r--r-- 1 boinc boinc      5111 Apr  3 14:33 queuedata.json
[2025-04-06 08:37:28] -rw-rw-r-- 1 boinc boinc       100 Apr  6 07:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-06 08:37:28] -rwxr-xr-x 1 boinc boinc      7986 Apr  6 07:48 run_atlas
[2025-04-06 08:37:28] -rw-rw-r-- 1 boinc boinc       105 Apr  6 07:48 job.xml
[2025-04-06 08:37:28] -rw-r--r-- 2 boinc boinc     17569 Apr  6 07:48 start_atlas.sh
[2025-04-06 08:37:28] drwxrwx--x 2 boinc boinc      4096 Apr  6 07:48 shared
[2025-04-06 08:37:28] -rw-r--r-- 2 boinc boinc    508875 Apr  6 07:48 input.tar.gz
[2025-04-06 08:37:28] -rw-rw-r-- 1 boinc boinc      9677 Apr  6 07:48 init_data.xml
[2025-04-06 08:37:28] -rw-r--r-- 2 boinc boinc 220997606 Apr  6 07:48 EVNT.44004365._000381.pool.root.1
[2025-04-06 08:37:28] -rw-rw-r-- 1 boinc boinc         0 Apr  6 07:48 boinc_lockfile
[2025-04-06 08:37:28] -rw-rw-r-- 1 boinc boinc      2550 Apr  6 07:48 pandaJob.out
[2025-04-06 08:37:28] -rw------- 1 boinc boinc       424 Apr  6 07:48 setup.sh.local
[2025-04-06 08:37:28] -rw------- 1 boinc boinc    980067 Apr  6 07:49 agis_schedconf.cvmfs.json
[2025-04-06 08:37:28] -rw------- 1 boinc boinc   1603525 Apr  6 07:49 agis_ddmendpoints.agis.ALL.json
[2025-04-06 08:37:28] drwx------ 4 boinc boinc      4096 Apr  6 07:49 pilot3
[2025-04-06 08:37:28] -rw------- 1 boinc boinc        95 Apr  6 08:36 pilot_heartbeat.json
[2025-04-06 08:37:28] -rw------- 1 boinc boinc 191813443 Apr  6 08:36 HITS.44004367._010246.pool.root.1
[2025-04-06 08:37:28] -rw-rw-r-- 1 boinc boinc       529 Apr  6 08:36 boinc_task_state.xml
[2025-04-06 08:37:28] -rw------- 1 boinc boinc      1026 Apr  6 08:37 memory_monitor_summary.json
[2025-04-06 08:37:28] -rw------- 1 boinc boinc    348047 Apr  6 08:37 log.44004367._010246.job.log.tgz.1
[2025-04-06 08:37:28] -rw------- 1 boinc boinc      7649 Apr  6 08:37 heartbeat.json
[2025-04-06 08:37:28] -rw-rw-r-- 1 boinc boinc      8192 Apr  6 08:37 boinc_mmap_file
[2025-04-06 08:37:28] -rw-rw-r-- 1 boinc boinc        27 Apr  6 08:37 wrapper_checkpoint.txt
[2025-04-06 08:37:28] -rw------- 1 boinc boinc      4500 Apr  6 08:37 pilotlog.txt
[2025-04-06 08:37:28] -rw------- 1 boinc boinc    308041 Apr  6 08:37 log.44004367._010246.job.log.1
[2025-04-06 08:37:28] -rw------- 1 boinc boinc       357 Apr  6 08:37 output.list
[2025-04-06 08:37:28] -rw-rw-r-- 1 boinc boinc       620 Apr  6 08:37 runtime_log
[2025-04-06 08:37:28] -rw------- 1 boinc boinc    675840 Apr  6 08:37 result.tar.gz
[2025-04-06 08:37:28] -rw-rw-r-- 1 boinc boinc     11399 Apr  6 08:37 runtime_log.err
[2025-04-06 08:37:28] -rw------- 1 boinc boinc       647 Apr  6 08:37 d9ZMDmHoaK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmnSHLDmR5I8on.diag
[2025-04-06 08:37:28] -rw-rw-r-- 1 boinc boinc     21625 Apr  6 08:37 stderr.txt
[2025-04-06 08:37:28] HITS file was successfully produced:
[2025-04-06 08:37:28] -rw------- 1 boinc boinc 191813443 Apr  6 08:36 shared/HITS.pool.root.1
[2025-04-06 08:37:28]  *** Contents of shared directory: ***
[2025-04-06 08:37:28] total 404328
[2025-04-06 08:37:28] -rw-r--r-- 2 boinc boinc     17569 Apr  6 07:48 start_atlas.sh
[2025-04-06 08:37:28] -rw-r--r-- 2 boinc boinc    508875 Apr  6 07:48 input.tar.gz
[2025-04-06 08:37:28] -rw-r--r-- 2 boinc boinc 220997606 Apr  6 07:48 ATLAS.root_0
[2025-04-06 08:37:28] -rw------- 1 boinc boinc 191813443 Apr  6 08:36 HITS.pool.root.1
[2025-04-06 08:37:28] -rw------- 1 boinc boinc    675840 Apr  6 08:37 result.tar.gz
08:37:30 (3967171): run_atlas exited; CPU time 23383.025395
08:37:30 (3967171): called boinc_finish(0)

</stderr_txt>
]]>

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