Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:38:21 (528407): wrapper (7.7.26015): starting
03:38:21 (528407): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 03:38:21] Arguments: --nthreads 8
[2025-04-04 03:38:21] Threads: 8
[2025-04-04 03:38:21] Checking for CVMFS
[2025-04-04 03:38:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 03:38:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 03:38:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 03:38:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 03:38:22] 2.12.6.0 1669502 56612 944452 144481 2 324 31721623 32935936 21284 130560 0 22911255 99.747 12278584 12048 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 03:38:22] CVMFS is ok
[2025-04-04 03:38:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 03:38:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 03:38:22] Further information can be found at the LHC@home message board.
[2025-04-04 03:38:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 03:38:22] Checking for apptainer binary...
[2025-04-04 03:38:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 03:38:22] Running /usr/bin/apptainer --version
[2025-04-04 03:38:22] apptainer version 1.4.0-1.el9
[2025-04-04 03:38:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 03:38:22] lc-12-33.aglt2.org
[2025-04-04 03:38:22] apptainer works
[2025-04-04 03:38:22] Set ATHENA_PROC_NUMBER=8
[2025-04-04 03:38:22] Set ATHENA_CORE_NUMBER=8
[2025-04-04 03:38:22] Starting ATLAS job with PandaID=6586320652
[2025-04-04 03:38:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 10:11:58]  *** The last 200 lines of the pilot log: ***
[2025-04-04 10:11:58] 2025-04-04 14:11:35,704 | INFO     | mean x: 1743764091.1844156
[2025-04-04 10:11:58] 2025-04-04 14:11:35,704 | INFO     | mean y: 2138453.916883117
[2025-04-04 10:11:58] 2025-04-04 14:11:35,704 | INFO     | -- intersect: -20047720720.04778
[2025-04-04 10:11:58] 2025-04-04 14:11:35,704 | INFO     | intersect: -20047720720.04778
[2025-04-04 10:11:58] 2025-04-04 14:11:35,705 | INFO     | chi2: 7.340058059706288
[2025-04-04 10:11:58] 2025-04-04 14:11:35,705 | INFO     | sum of square deviations: 17014525109.734278
[2025-04-04 10:11:58] 2025-04-04 14:11:35,729 | INFO     | sum of deviations: 248745807432.7318
[2025-04-04 10:11:58] 2025-04-04 14:11:35,729 | INFO     | mean x: 1743763938.6868422
[2025-04-04 10:11:58] 2025-04-04 14:11:35,729 | INFO     | mean y: 2148530.4263157896
[2025-04-04 10:11:58] 2025-04-04 14:11:35,729 | INFO     | -- intersect: -25491008998.40661
[2025-04-04 10:11:58] 2025-04-04 14:11:35,730 | INFO     | intersect: -25491008998.40661
[2025-04-04 10:11:58] 2025-04-04 14:11:35,730 | INFO     | chi2: 5.830667736490455
[2025-04-04 10:11:58] 2025-04-04 14:11:35,730 | INFO     | current chi2=5.830667736490455 (change=20.563738201223856 %)
[2025-04-04 10:11:58] 2025-04-04 14:11:35,730 | INFO     | right removable region: 379
[2025-04-04 10:11:58] 2025-04-04 14:11:35,731 | INFO     | sum of square deviations: 17014481799.73428
[2025-04-04 10:11:58] 2025-04-04 14:11:35,773 | INFO     | sum of deviations: 112796874750.16592
[2025-04-04 10:11:58] 2025-04-04 14:11:35,774 | INFO     | mean x: 1743764243.6868422
[2025-04-04 10:11:58] 2025-04-04 14:11:35,774 | INFO     | mean y: 2158742.4131578947
[2025-04-04 10:11:58] 2025-04-04 14:11:35,774 | INFO     | -- intersect: -11558061504.32009
[2025-04-04 10:11:58] 2025-04-04 14:11:35,774 | INFO     | intersect: -11558061504.32009
[2025-04-04 10:11:58] 2025-04-04 14:11:35,775 | INFO     | chi2: 4.482483979133055
[2025-04-04 10:11:58] 2025-04-04 14:11:35,775 | INFO     | current chi2=4.482483979133055 (change=38.93121903571944 %)
[2025-04-04 10:11:58] 2025-04-04 14:11:35,775 | INFO     | sum of square deviations: 16351619809.557241
[2025-04-04 10:11:58] 2025-04-04 14:11:35,801 | INFO     | sum of deviations: 48098114730.75475
[2025-04-04 10:11:58] 2025-04-04 14:11:35,801 | INFO     | mean x: 1743764396.1893334
[2025-04-04 10:11:58] 2025-04-04 14:11:35,801 | INFO     | mean y: 2173623.5386666665
[2025-04-04 10:11:58] 2025-04-04 14:11:35,801 | INFO     | -- intersect: -5127090692.055206
[2025-04-04 10:11:58] 2025-04-04 14:11:35,801 | INFO     | intersect: -5127090692.055206
[2025-04-04 10:11:58] 2025-04-04 14:11:35,813 | INFO     | chi2: 3.1359235064234414
[2025-04-04 10:11:58] 2025-04-04 14:11:35,813 | INFO     | current chi2=3.1359235064234414 (change=30.040497165815815 %)
[2025-04-04 10:11:58] 2025-04-04 14:11:35,814 | INFO     | sum of square deviations: 15706223125.256691
[2025-04-04 10:11:58] 2025-04-04 14:11:35,839 | INFO     | sum of deviations: -9352187728.256725
[2025-04-04 10:11:58] 2025-04-04 14:11:35,839 | INFO     | mean x: 1743764548.6891892
[2025-04-04 10:11:58] 2025-04-04 14:11:35,840 | INFO     | mean y: 2187188.910810811
[2025-04-04 10:11:58] 2025-04-04 14:11:35,840 | INFO     | -- intersect: 1040502593.1403452
[2025-04-04 10:11:58] 2025-04-04 14:11:35,840 | INFO     | intersect: 1040502593.1403452
[2025-04-04 10:11:58] 2025-04-04 14:11:35,840 | INFO     | chi2: 2.0519803063475135
[2025-04-04 10:11:58] 2025-04-04 14:11:35,840 | INFO     | current chi2=2.0519803063475135 (change=34.56535842968243 %)
[2025-04-04 10:11:58] 2025-04-04 14:11:35,841 | INFO     | sum of square deviations: 15078080716.701412
[2025-04-04 10:11:58] 2025-04-04 14:11:35,868 | INFO     | sum of deviations: -38593478584.81369
[2025-04-04 10:11:58] 2025-04-04 14:11:35,869 | INFO     | mean x: 1743764701.1835616
[2025-04-04 10:11:58] 2025-04-04 14:11:35,869 | INFO     | mean y: 2194271.5643835617
[2025-04-04 10:11:58] 2025-04-04 14:11:35,869 | INFO     | -- intersect: 4465490822.135204
[2025-04-04 10:11:58] 2025-04-04 14:11:35,869 | INFO     | intersect: 4465490822.135204
[2025-04-04 10:11:58] 2025-04-04 14:11:35,869 | INFO     | chi2: 1.7385830691921855
[2025-04-04 10:11:58] 2025-04-04 14:11:35,869 | INFO     | current chi2=1.7385830691921855 (change=15.2729164205854 %)
[2025-04-04 10:11:58] 2025-04-04 14:11:35,870 | INFO     | left removable region: 40
[2025-04-04 10:11:58] 2025-04-04 14:11:35,870 | INFO     | sum of square deviations: 12079998664.023645
[2025-04-04 10:11:58] 2025-04-04 14:11:35,893 | INFO     | sum of deviations: 8263135489.327438
[2025-04-04 10:11:58] 2025-04-04 14:11:35,893 | INFO     | mean x: 1743765128.179941
[2025-04-04 10:11:58] 2025-04-04 14:11:35,893 | INFO     | mean y: 2205392.371681416
[2025-04-04 10:11:58] 2025-04-04 14:11:35,893 | INFO     | -- intersect: -1190590063.6930375
[2025-04-04 10:11:58] 2025-04-04 14:11:35,893 | INFO     | intersect: -1190590063.6930375
[2025-04-04 10:11:58] 2025-04-04 14:11:35,894 | INFO     | chi2: 0.12662944977561877
[2025-04-04 10:11:58] 2025-04-04 14:11:35,894 | INFO     | -- intersect: -1190590063.6930375
[2025-04-04 10:11:58] 2025-04-04 14:11:35,894 | INFO     | current memory leak: 0.68 B/s (using 339 data points, chi2=0.13)
[2025-04-04 10:11:58] 2025-04-04 14:11:35,924 | INFO     | ..............................
[2025-04-04 10:11:58] 2025-04-04 14:11:35,924 | INFO     | . Timing measurements:
[2025-04-04 10:11:58] 2025-04-04 14:11:35,924 | INFO     | . get job = 0 s
[2025-04-04 10:11:58] 2025-04-04 14:11:35,924 | INFO     | . initial setup = 3 s
[2025-04-04 10:11:58] 2025-04-04 14:11:35,924 | INFO     | . payload setup = 15 s
[2025-04-04 10:11:58] 2025-04-04 14:11:35,924 | INFO     | . stage-in = 0 s
[2025-04-04 10:11:58] 2025-04-04 14:11:35,924 | INFO     | . payload execution = 23469 s
[2025-04-04 10:11:58] 2025-04-04 14:11:35,925 | INFO     | . stage-out = 8 s
[2025-04-04 10:11:58] 2025-04-04 14:11:35,925 | INFO     | . log creation = 2 s
[2025-04-04 10:11:58] 2025-04-04 14:11:35,925 | INFO     | ..............................
[2025-04-04 10:11:58] 2025-04-04 14:11:36,585 | INFO     | 
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | job summary report
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | --------------------------------------------------
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | PanDA job id: 6586320652
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | task id: 43634898
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | errors: (none)
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | pilot state: finished 
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | transexitcode: 0
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | exeerrorcode: 0
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | exeerrordiag: 
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | exitcode: 0
[2025-04-04 10:11:58] 2025-04-04 14:11:36,586 | INFO     | exitmsg: OK
[2025-04-04 10:11:58] 2025-04-04 14:11:36,587 | INFO     | cpuconsumptiontime: 80728 s
[2025-04-04 10:11:58] 2025-04-04 14:11:36,587 | INFO     | nevents: 400
[2025-04-04 10:11:58] 2025-04-04 14:11:36,587 | INFO     | neventsw: 0
[2025-04-04 10:11:58] 2025-04-04 14:11:36,587 | INFO     | pid: 576015
[2025-04-04 10:11:58] 2025-04-04 14:11:36,587 | INFO     | pgrp: 576015
[2025-04-04 10:11:58] 2025-04-04 14:11:36,587 | INFO     | corecount: 8
[2025-04-04 10:11:58] 2025-04-04 14:11:36,587 | INFO     | event service: False
[2025-04-04 10:11:58] 2025-04-04 14:11:36,587 | INFO     | sizes: {0: 2417349, 1: 2417349, 10: 2417583, 12: 2417611, 23489: 2451938, 23490: 2451937, 23500: 2461062, 23503: 2461118, 23546: 2461288}
[2025-04-04 10:11:58] 2025-04-04 14:11:36,587 | INFO     | --------------------------------------------------
[2025-04-04 10:11:58] 2025-04-04 14:11:36,587 | INFO     | 
[2025-04-04 10:11:58] 2025-04-04 14:11:36,587 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-04-04 10:11:58] 2025-04-04 14:11:36,803 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,803 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,803 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,803 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 10:11:58] 2025-04-04 14:11:36,804 | INFO     | job 6586320652 has completed (purged errors)
[2025-04-04 10:11:58] 2025-04-04 14:11:36,805 | INFO     | overall cleanup function is called
[2025-04-04 10:11:58] 2025-04-04 14:11:37,834 | INFO     | --- collectZombieJob: --- 10, [576015]
[2025-04-04 10:11:58] 2025-04-04 14:11:37,835 | INFO     | zombie collector waiting for pid 576015
[2025-04-04 10:11:58] 2025-04-04 14:11:37,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 10:11:58] 2025-04-04 14:11:37,835 | INFO     | collected zombie processes
[2025-04-04 10:11:58] 2025-04-04 14:11:37,835 | INFO     | will attempt to kill all subprocesses of pid=576015
[2025-04-04 10:11:58] 2025-04-04 14:11:40,568 | INFO     | process IDs to be killed: [576015] (in reverse order)
[2025-04-04 10:11:58] 2025-04-04 14:11:41,146 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 10:11:58] 2025-04-04 14:11:41,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 10:11:58] 2025-04-04 14:11:41,343 | INFO     | did not find any defunct processes belonging to 576015
[2025-04-04 10:11:58] 2025-04-04 14:11:41,474 | INFO     | did not find any defunct processes belonging to 576015
[2025-04-04 10:11:58] 2025-04-04 14:11:41,475 | INFO     | ready for new job
[2025-04-04 10:11:58] 2025-04-04 14:11:41,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 10:11:58] 2025-04-04 14:11:41,480 | INFO     | **************************************
[2025-04-04 10:11:58] 2025-04-04 14:11:41,480 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 10:11:58] 2025-04-04 14:11:41,480 | INFO     | **************************************
[2025-04-04 10:11:58] 2025-04-04 14:11:41,480 | INFO     | 
[2025-04-04 10:11:58] 2025-04-04 14:11:41,489 | INFO     | architecture information:
[2025-04-04 10:11:58] 2025-04-04 14:11:41,501 | INFO     | executing command: cat /etc/os-release
[2025-04-04 10:11:58] 2025-04-04 14:11:41,644 | INFO     | cat /etc/os-release:
[2025-04-04 10:11:58] NAME="CentOS Linux"
[2025-04-04 10:11:58] VERSION="7 (Core)"
[2025-04-04 10:11:58] ID="centos"
[2025-04-04 10:11:58] ID_LIKE="rhel fedora"
[2025-04-04 10:11:58] VERSION_ID="7"
[2025-04-04 10:11:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 10:11:58] ANSI_COLOR="0;31"
[2025-04-04 10:11:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 10:11:58] HOME_URL="https://www.centos.org/"
[2025-04-04 10:11:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 10:11:58] 
[2025-04-04 10:11:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 10:11:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 10:11:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 10:11:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 10:11:58] 
[2025-04-04 10:11:58] 2025-04-04 14:11:41,644 | INFO     | **************************************
[2025-04-04 10:11:58] 2025-04-04 14:11:42,151 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-04-04 10:11:58] 2025-04-04 14:11:42,362 | INFO     | sufficient remaining disk space (72822554624 B)
[2025-04-04 10:11:58] 2025-04-04 14:11:42,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 10:11:58] 2025-04-04 14:11:42,363 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 10:11:58] 2025-04-04 14:11:42,363 | INFO     | update_server=False
[2025-04-04 10:11:58] 2025-04-04 14:11:42,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 10:11:58] 2025-04-04 14:11:42,363 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 10:11:58] 2025-04-04 14:11:42,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 10:11:58] 2025-04-04 14:11:42,540 | INFO     | all data control threads have been joined
[2025-04-04 10:11:58] 2025-04-04 14:11:42,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 10:11:58] 2025-04-04 14:11:42,787 | INFO     | aborting loop
[2025-04-04 10:11:58] 2025-04-04 14:11:43,358 | INFO     | all payload control threads have been joined
[2025-04-04 10:11:58] 2025-04-04 14:11:43,369 | INFO     | [job] retrieve thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:43,373 | INFO     | [job] queue monitor thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:43,556 | INFO     | [data] control thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:43,642 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:43,708 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:43,740 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:43,769 | INFO     | all job control threads have been joined
[2025-04-04 10:11:58] 2025-04-04 14:11:43,798 | INFO     | [job] job monitor thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:44,385 | INFO     | [payload] control thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:44,404 | INFO     | [data] copytool_out thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:44,685 | INFO     | [data] copytool_in thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:44,685 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:44,690 | INFO     | [job] validate thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:44,765 | INFO     | [payload] failed_post thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:44,790 | INFO     | [job] control thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:44,805 | INFO     | [payload] validate_post thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:45,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 10:11:58] 2025-04-04 14:11:46,581 | INFO     | PID=545150 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-04 10:11:58] 2025-04-04 14:11:46,581 | INFO     | .. there are 58 such processes running
[2025-04-04 10:11:58] 2025-04-04 14:11:46,585 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 10:11:58] 2025-04-04 14:11:46,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 10:11:58] 2025-04-04 14:11:46,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 10:11:58] 2025-04-04 14:11:49,252 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 10:11:58] 2025-04-04 14:11:49,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139985579460416)>', '<ExcThread(monitor, started 139985231525632)>']
[2025-04-04 10:11:58] 2025-04-04 14:11:49,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 10:11:58] 2025-04-04 14:11:49,611 | INFO     | [monitor] control thread has ended
[2025-04-04 10:11:58] 2025-04-04 14:11:54,485 | INFO     | all workflow threads have been joined
[2025-04-04 10:11:58] 2025-04-04 14:11:54,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 10:11:58] 2025-04-04 14:11:54,486 | INFO     | traces error code: 0
[2025-04-04 10:11:58] 2025-04-04 14:11:54,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 10:11:58] 2025-04-04 14:11:56,136 [wrapper] ==== pilot stdout END ====
[2025-04-04 10:11:58] 2025-04-04 14:11:56,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 10:11:58] 2025-04-04 14:11:56,255 [wrapper] pilotpid: 545150
[2025-04-04 10:11:58] 2025-04-04 14:11:56,298 [wrapper] Pilot exit status: 0
[2025-04-04 10:11:58] 2025-04-04 14:11:56,322 [wrapper] pandaids: 6586320652
[2025-04-04 10:11:58] 2025-04-04 14:11:57,278 [wrapper] cleanup supervisor_pilot  603030 545151
[2025-04-04 10:11:58] 2025-04-04 14:11:57,294 [wrapper] Test setup, not cleaning
[2025-04-04 10:11:58] 2025-04-04 14:11:57,342 [wrapper] apfmon messages muted
[2025-04-04 10:11:58] 2025-04-04 14:11:57,382 [wrapper] ==== wrapper stdout END ====
[2025-04-04 10:11:58] 2025-04-04 14:11:57,442 [wrapper] ==== wrapper stderr END ====
[2025-04-04 10:11:58]  *** Error codes and diagnostics ***
[2025-04-04 10:11:58]     "exeErrorCode": 0,
[2025-04-04 10:11:58]     "exeErrorDiag": "",
[2025-04-04 10:11:58]     "pilotErrorCode": 0,
[2025-04-04 10:11:58]     "pilotErrorDiag": "",
[2025-04-04 10:11:58]  *** Listing of results directory ***
[2025-04-04 10:11:58] total 678564
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 14:20 pilot3.tar.gz
[2025-04-04 10:11:58] -rwx------. 1 boincer umatlas     37140 Apr  3 14:23 runpilot2-wrapper.sh
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 14:23 queuedata.json
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas       100 Apr  4 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 10:11:58] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 03:38 run_atlas
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas       105 Apr  4 03:38 job.xml
[2025-04-04 10:11:58] -rw-r--r--. 2 boincer umatlas 361348082 Apr  4 03:38 EVNT.43634896._000447.pool.root.1
[2025-04-04 10:11:58] -rw-r--r--. 2 boincer umatlas    508887 Apr  4 03:38 input.tar.gz
[2025-04-04 10:11:58] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 03:38 start_atlas.sh
[2025-04-04 10:11:58] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 03:38 shared
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas         0 Apr  4 03:38 boinc_lockfile
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas      2599 Apr  4 03:38 pandaJob.out
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas       467 Apr  4 03:38 setup.sh.local
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas    979978 Apr  4 03:38 agis_schedconf.cvmfs.json
[2025-04-04 10:11:58] drwx------. 4 boincer umatlas      4096 Apr  4 03:38 pilot3
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas 325401440 Apr  4 10:08 HITS.43634898._016519.pool.root.1
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas       531 Apr  4 10:08 boinc_task_state.xml
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas      6880 Apr  4 10:09 init_data.xml
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas      1046 Apr  4 10:10 memory_monitor_summary.json
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas   1603525 Apr  4 10:10 agis_ddmendpoints.agis.ALL.json
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas    464749 Apr  4 10:10 log.43634898._016519.job.log.tgz.1
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas        95 Apr  4 10:11 pilot_heartbeat.json
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas      7726 Apr  4 10:11 heartbeat.json
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 10:11 boinc_mmap_file
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas        28 Apr  4 10:11 wrapper_checkpoint.txt
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas      4747 Apr  4 10:11 pilotlog.txt
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas   1668165 Apr  4 10:11 log.43634898._016519.job.log.1
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas       357 Apr  4 10:11 output.list
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas       620 Apr  4 10:11 runtime_log
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas   2150400 Apr  4 10:11 result.tar.gz
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas     11419 Apr  4 10:11 runtime_log.err
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas       657 Apr  4 10:11 dI6LDmRPeK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm1DtKDmY39ZGn.diag
[2025-04-04 10:11:58] -rw-r--r--. 1 boincer umatlas     20933 Apr  4 10:11 stderr.txt
[2025-04-04 10:11:58] HITS file was successfully produced:
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas 325401440 Apr  4 10:08 shared/HITS.pool.root.1
[2025-04-04 10:11:58]  *** Contents of shared directory: ***
[2025-04-04 10:11:58] total 673280
[2025-04-04 10:11:58] -rw-r--r--. 2 boincer umatlas 361348082 Apr  4 03:38 ATLAS.root_0
[2025-04-04 10:11:58] -rw-r--r--. 2 boincer umatlas    508887 Apr  4 03:38 input.tar.gz
[2025-04-04 10:11:58] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 03:38 start_atlas.sh
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas 325401440 Apr  4 10:08 HITS.pool.root.1
[2025-04-04 10:11:58] -rw-------. 1 boincer umatlas   2150400 Apr  4 10:11 result.tar.gz
10:11:59 (528407): run_atlas exited; CPU time 82217.027646
10:11:59 (528407): called boinc_finish(0)

</stderr_txt>
]]>

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