Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:28:19 (37606): wrapper (7.7.26015): starting
03:28:19 (37606): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 03:28:19] Arguments: --nthreads 8
[2025-04-04 03:28:19] Threads: 8
[2025-04-04 03:28:19] Checking for CVMFS
[2025-04-04 03:28:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 03:28:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 03:28:20] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 03:28:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 03:28:21] 2.11.2.0 82244 3482 160128 144481 1 254 9808720 18432000 19690 130560 0 26736240 98.514 69821162 56509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-04 03:28:21] CVMFS is ok
[2025-04-04 03:28:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 03:28:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 03:28:21] Further information can be found at the LHC@home message board.
[2025-04-04 03:28:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 03:28:21] Checking for apptainer binary...
[2025-04-04 03:28:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 03:28:21] Running /usr/bin/apptainer --version
[2025-04-04 03:28:21] apptainer version 1.3.2-1.el7
[2025-04-04 03:28:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 03:28:29] c-212-8.aglt2.org
[2025-04-04 03:28:29] apptainer works
[2025-04-04 03:28:29] Set ATHENA_PROC_NUMBER=8
[2025-04-04 03:28:29] Set ATHENA_CORE_NUMBER=8
[2025-04-04 03:28:29] Starting ATLAS job with PandaID=6587169062
[2025-04-04 03:28:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 07:37:15]  *** The last 200 lines of the pilot log: ***
[2025-04-04 07:37:15] 2025-04-04 11:36:54,142 | INFO     | -- intersect: -61125393336.530655
[2025-04-04 07:37:15] 2025-04-04 11:36:54,142 | INFO     | intersect: -61125393336.530655
[2025-04-04 07:37:15] 2025-04-04 11:36:54,143 | INFO     | chi2: 7.303455189630764
[2025-04-04 07:37:15] 2025-04-04 11:36:54,143 | INFO     | sum of square deviations: 3972970797.4060035
[2025-04-04 07:37:15] 2025-04-04 11:36:54,144 | INFO     | sum of deviations: 161309431316.7735
[2025-04-04 07:37:15] 2025-04-04 11:36:54,145 | INFO     | mean x: 1743759079.568376
[2025-04-04 07:37:15] 2025-04-04 11:36:54,145 | INFO     | mean y: 2383390.482905983
[2025-04-04 07:37:15] 2025-04-04 11:36:54,145 | INFO     | -- intersect: -70797227233.96191
[2025-04-04 07:37:15] 2025-04-04 11:36:54,145 | INFO     | intersect: -70797227233.96191
[2025-04-04 07:37:15] 2025-04-04 11:36:54,145 | INFO     | chi2: 6.486809290901759
[2025-04-04 07:37:15] 2025-04-04 11:36:54,145 | INFO     | current chi2=6.486809290901759 (change=11.181637697845476 %)
[2025-04-04 07:37:15] 2025-04-04 11:36:54,145 | INFO     | right removable region: 233
[2025-04-04 07:37:15] 2025-04-04 11:36:54,146 | INFO     | sum of square deviations: 3972961037.4060035
[2025-04-04 07:37:15] 2025-04-04 11:36:54,147 | INFO     | sum of deviations: 79824399358.94019
[2025-04-04 07:37:15] 2025-04-04 11:36:54,147 | INFO     | mean x: 1743759384.568376
[2025-04-04 07:37:15] 2025-04-04 11:36:54,147 | INFO     | mean y: 2416092.316239316
[2025-04-04 07:37:15] 2025-04-04 11:36:54,147 | INFO     | -- intersect: -35033050953.33284
[2025-04-04 07:37:15] 2025-04-04 11:36:54,147 | INFO     | intersect: -35033050953.33284
[2025-04-04 07:37:15] 2025-04-04 11:36:54,148 | INFO     | chi2: 3.7606723702190656
[2025-04-04 07:37:15] 2025-04-04 11:36:54,148 | INFO     | current chi2=3.7606723702190656 (change=48.50831185274663 %)
[2025-04-04 07:37:15] 2025-04-04 11:36:54,148 | INFO     | sum of square deviations: 3723677064.8820963
[2025-04-04 07:37:15] 2025-04-04 11:36:54,150 | INFO     | sum of deviations: 30964100355.38427
[2025-04-04 07:37:15] 2025-04-04 11:36:54,150 | INFO     | mean x: 1743759537.069869
[2025-04-04 07:37:15] 2025-04-04 11:36:54,150 | INFO     | mean y: 2445979.475982533
[2025-04-04 07:37:15] 2025-04-04 11:36:54,150 | INFO     | -- intersect: -14497722633.614923
[2025-04-04 07:37:15] 2025-04-04 11:36:54,150 | INFO     | intersect: -14497722633.614923
[2025-04-04 07:37:15] 2025-04-04 11:36:54,150 | INFO     | chi2: 2.1156703338346188
[2025-04-04 07:37:15] 2025-04-04 11:36:54,151 | INFO     | current chi2=2.1156703338346188 (change=43.7422320915614 %)
[2025-04-04 07:37:15] 2025-04-04 11:36:54,151 | INFO     | sum of square deviations: 3485044454.8571205
[2025-04-04 07:37:15] 2025-04-04 11:36:54,152 | INFO     | sum of deviations: -8757175292.714285
[2025-04-04 07:37:15] 2025-04-04 11:36:54,153 | INFO     | mean x: 1743759689.5714285
[2025-04-04 07:37:15] 2025-04-04 11:36:54,153 | INFO     | mean y: 2471293.5133928573
[2025-04-04 07:37:15] 2025-04-04 11:36:54,153 | INFO     | -- intersect: 4384168418.972901
[2025-04-04 07:37:15] 2025-04-04 11:36:54,153 | INFO     | intersect: 4384168418.972901
[2025-04-04 07:37:15] 2025-04-04 11:36:54,153 | INFO     | chi2: 0.9572874824088938
[2025-04-04 07:37:15] 2025-04-04 11:36:54,153 | INFO     | current chi2=0.9572874824088938 (change=54.75252135932608 %)
[2025-04-04 07:37:15] 2025-04-04 11:36:54,153 | INFO     | sum of square deviations: 3256830644.8310604
[2025-04-04 07:37:15] 2025-04-04 11:36:54,155 | INFO     | sum of deviations: -17455223563.328773
[2025-04-04 07:37:15] 2025-04-04 11:36:54,155 | INFO     | mean x: 1743759842.0730593
[2025-04-04 07:37:15] 2025-04-04 11:36:54,155 | INFO     | mean y: 2477068.520547945
[2025-04-04 07:37:15] 2025-04-04 11:36:54,155 | INFO     | -- intersect: 9348286293.341019
[2025-04-04 07:37:15] 2025-04-04 11:36:54,155 | INFO     | intersect: 9348286293.341019
[2025-04-04 07:37:15] 2025-04-04 11:36:54,155 | INFO     | chi2: 0.8839252610987576
[2025-04-04 07:37:15] 2025-04-04 11:36:54,155 | INFO     | current chi2=0.8839252610987576 (change=7.6635517186048885 %)
[2025-04-04 07:37:15] 2025-04-04 11:36:54,155 | INFO     | left removable region: 40
[2025-04-04 07:37:15] 2025-04-04 11:36:54,156 | INFO     | sum of square deviations: 2229097763.8341875
[2025-04-04 07:37:15] 2025-04-04 11:36:54,157 | INFO     | sum of deviations: 3415218962.088083
[2025-04-04 07:37:15] 2025-04-04 11:36:54,157 | INFO     | mean x: 1743760269.0777202
[2025-04-04 07:37:15] 2025-04-04 11:36:54,157 | INFO     | mean y: 2482887.92746114
[2025-04-04 07:37:15] 2025-04-04 11:36:54,157 | INFO     | -- intersect: -2669146518.782148
[2025-04-04 07:37:15] 2025-04-04 11:36:54,157 | INFO     | intersect: -2669146518.782148
[2025-04-04 07:37:15] 2025-04-04 11:36:54,157 | INFO     | chi2: 0.001134729329005866
[2025-04-04 07:37:15] 2025-04-04 11:36:54,157 | INFO     | -- intersect: -2669146518.782148
[2025-04-04 07:37:15] 2025-04-04 11:36:54,157 | INFO     | current memory leak: 1.53 B/s (using 193 data points, chi2=0.00)
[2025-04-04 07:37:15] 2025-04-04 11:36:54,158 | INFO     | ..............................
[2025-04-04 07:37:15] 2025-04-04 11:36:54,158 | INFO     | . Timing measurements:
[2025-04-04 07:37:15] 2025-04-04 11:36:54,158 | INFO     | . get job = 0 s
[2025-04-04 07:37:15] 2025-04-04 11:36:54,158 | INFO     | . initial setup = 4 s
[2025-04-04 07:37:15] 2025-04-04 11:36:54,158 | INFO     | . payload setup = 51 s
[2025-04-04 07:37:15] 2025-04-04 11:36:54,158 | INFO     | . stage-in = 0 s
[2025-04-04 07:37:15] 2025-04-04 11:36:54,158 | INFO     | . payload execution = 14648 s
[2025-04-04 07:37:15] 2025-04-04 11:36:54,158 | INFO     | . stage-out = 4 s
[2025-04-04 07:37:15] 2025-04-04 11:36:54,158 | INFO     | . log creation = 1 s
[2025-04-04 07:37:15] 2025-04-04 11:36:54,158 | INFO     | ..............................
[2025-04-04 07:37:15] 2025-04-04 11:36:54,319 | INFO     | 
[2025-04-04 07:37:15] 2025-04-04 11:36:54,319 | INFO     | job summary report
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | --------------------------------------------------
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | PanDA job id: 6587169062
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | task id: 44004367
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | errors: (none)
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | pilot state: finished 
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | transexitcode: 0
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | exeerrorcode: 0
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | exeerrordiag: 
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | exitcode: 0
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | exitmsg: OK
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | cpuconsumptiontime: 36230 s
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | nevents: 400
[2025-04-04 07:37:15] 2025-04-04 11:36:54,320 | INFO     | neventsw: 0
[2025-04-04 07:37:15] 2025-04-04 11:36:54,321 | INFO     | pid: 76869
[2025-04-04 07:37:15] 2025-04-04 11:36:54,321 | INFO     | pgrp: 76869
[2025-04-04 07:37:15] 2025-04-04 11:36:54,321 | INFO     | corecount: 8
[2025-04-04 07:37:15] 2025-04-04 11:36:54,321 | INFO     | event service: False
[2025-04-04 07:37:15] 2025-04-04 11:36:54,321 | INFO     | sizes: {0: 2417272, 11: 2417272, 22: 2417300, 28: 2417534, 33: 2417562, 14703: 2448333, 14704: 2448460, 14708: 2457457, 14710: 2457513, 14764: 2457683}
[2025-04-04 07:37:15] 2025-04-04 11:36:54,321 | INFO     | --------------------------------------------------
[2025-04-04 07:37:15] 2025-04-04 11:36:54,321 | INFO     | 
[2025-04-04 07:37:15] 2025-04-04 11:36:54,321 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,339 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,339 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,339 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,339 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 07:37:15] 2025-04-04 11:36:54,339 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,339 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 07:37:15] 2025-04-04 11:36:54,339 | INFO     | job 6587169062 has completed (purged errors)
[2025-04-04 07:37:15] 2025-04-04 11:36:54,339 | INFO     | overall cleanup function is called
[2025-04-04 07:37:15] 2025-04-04 11:36:55,347 | INFO     | --- collectZombieJob: --- 10, [76869]
[2025-04-04 07:37:15] 2025-04-04 11:36:55,348 | INFO     | zombie collector waiting for pid 76869
[2025-04-04 07:37:15] 2025-04-04 11:36:55,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 07:37:15] 2025-04-04 11:36:55,348 | INFO     | collected zombie processes
[2025-04-04 07:37:15] 2025-04-04 11:36:55,348 | INFO     | will attempt to kill all subprocesses of pid=76869
[2025-04-04 07:37:15] 2025-04-04 11:36:56,337 | INFO     | process IDs to be killed: [76869] (in reverse order)
[2025-04-04 07:37:15] 2025-04-04 11:36:56,836 | INFO     | PID=60937 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-04 07:37:15] 2025-04-04 11:36:56,836 | INFO     | .. there are 21 such processes running
[2025-04-04 07:37:15] 2025-04-04 11:36:56,842 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 07:37:15] 2025-04-04 11:36:56,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 07:37:15] 2025-04-04 11:36:56,853 | INFO     | did not find any defunct processes belonging to 76869
[2025-04-04 07:37:15] 2025-04-04 11:36:56,880 | INFO     | did not find any defunct processes belonging to 76869
[2025-04-04 07:37:15] 2025-04-04 11:36:56,880 | INFO     | ready for new job
[2025-04-04 07:37:15] 2025-04-04 11:36:56,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 07:37:15] 2025-04-04 11:36:56,894 | INFO     | **************************************
[2025-04-04 07:37:15] 2025-04-04 11:36:56,894 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 07:37:15] 2025-04-04 11:36:56,895 | INFO     | **************************************
[2025-04-04 07:37:15] 2025-04-04 11:36:56,895 | INFO     | 
[2025-04-04 07:37:15] 2025-04-04 11:36:56,907 | INFO     | architecture information:
[2025-04-04 07:37:15] 2025-04-04 11:36:56,919 | INFO     | executing command: cat /etc/os-release
[2025-04-04 07:37:15] 2025-04-04 11:36:57,041 | INFO     | cat /etc/os-release:
[2025-04-04 07:37:15] NAME="CentOS Linux"
[2025-04-04 07:37:15] VERSION="7 (Core)"
[2025-04-04 07:37:15] ID="centos"
[2025-04-04 07:37:15] ID_LIKE="rhel fedora"
[2025-04-04 07:37:15] VERSION_ID="7"
[2025-04-04 07:37:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 07:37:15] ANSI_COLOR="0;31"
[2025-04-04 07:37:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 07:37:15] HOME_URL="https://www.centos.org/"
[2025-04-04 07:37:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 07:37:15] 
[2025-04-04 07:37:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 07:37:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 07:37:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 07:37:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 07:37:15] 
[2025-04-04 07:37:15] 2025-04-04 11:36:57,041 | INFO     | **************************************
[2025-04-04 07:37:15] 2025-04-04 11:36:57,545 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-04 07:37:15] 2025-04-04 11:36:57,637 | INFO     | sufficient remaining disk space (102509838336 B)
[2025-04-04 07:37:15] 2025-04-04 11:36:57,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 07:37:15] 2025-04-04 11:36:57,637 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 07:37:15] 2025-04-04 11:36:57,637 | INFO     | update_server=False
[2025-04-04 07:37:15] 2025-04-04 11:36:57,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 07:37:15] 2025-04-04 11:36:57,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 07:37:15] 2025-04-04 11:36:57,640 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 07:37:15] 2025-04-04 11:36:57,641 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 07:37:15] 2025-04-04 11:36:57,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 07:37:15] 2025-04-04 11:36:57,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 07:37:15] 2025-04-04 11:36:57,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 07:37:15] 2025-04-04 11:36:57,654 | INFO     | aborting loop
[2025-04-04 07:37:15] 2025-04-04 11:36:57,916 | INFO     | all data control threads have been joined
[2025-04-04 07:37:15] 2025-04-04 11:36:58,644 | INFO     | [job] retrieve thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:36:58,660 | INFO     | [job] job monitor thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:36:58,878 | INFO     | all payload control threads have been joined
[2025-04-04 07:37:15] 2025-04-04 11:36:58,922 | INFO     | [data] control thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:36:59,072 | INFO     | all job control threads have been joined
[2025-04-04 07:37:15] 2025-04-04 11:36:59,164 | INFO     | [payload] failed_post thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:36:59,246 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:36:59,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 07:37:15] 2025-04-04 11:36:59,647 | INFO     | [data] copytool_out thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:36:59,676 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:36:59,727 | INFO     | [job] validate thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:36:59,731 | INFO     | [data] copytool_in thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:36:59,826 | INFO     | [payload] validate_post thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:36:59,884 | INFO     | [payload] control thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:37:00,060 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:37:00,078 | INFO     | [job] control thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:37:00,343 | INFO     | [job] queue monitor thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:37:00,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 07:37:15] 2025-04-04 11:37:04,899 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:37:07,956 | INFO     | job.realtimelogging is not enabled
[2025-04-04 07:37:15] 2025-04-04 11:37:08,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 07:37:15] 2025-04-04 11:37:09,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043818460992)>', '<ExcThread(monitor, started 140043096151808)>']
[2025-04-04 07:37:15] 2025-04-04 11:37:09,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 07:37:15] 2025-04-04 11:37:09,713 | INFO     | [monitor] control thread has ended
[2025-04-04 07:37:15] 2025-04-04 11:37:14,069 | INFO     | all workflow threads have been joined
[2025-04-04 07:37:15] 2025-04-04 11:37:14,069 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 07:37:15] 2025-04-04 11:37:14,069 | INFO     | traces error code: 0
[2025-04-04 07:37:15] 2025-04-04 11:37:14,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 07:37:15] 2025-04-04 11:37:14,327 [wrapper] ==== pilot stdout END ====
[2025-04-04 07:37:15] 2025-04-04 11:37:14,332 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 07:37:15] 2025-04-04 11:37:14,334 [wrapper] pilotpid: 60937
[2025-04-04 07:37:15] 2025-04-04 11:37:14,339 [wrapper] Pilot exit status: 0
[2025-04-04 07:37:15] 2025-04-04 11:37:14,349 [wrapper] pandaids: 6587169062
[2025-04-04 07:37:15] 2025-04-04 11:37:14,616 [wrapper] cleanup supervisor_pilot  5968 60938
[2025-04-04 07:37:15] 2025-04-04 11:37:14,643 [wrapper] Test setup, not cleaning
[2025-04-04 07:37:15] 2025-04-04 11:37:14,689 [wrapper] apfmon messages muted
[2025-04-04 07:37:15] 2025-04-04 11:37:14,726 [wrapper] ==== wrapper stdout END ====
[2025-04-04 07:37:15] 2025-04-04 11:37:14,766 [wrapper] ==== wrapper stderr END ====
[2025-04-04 07:37:15]  *** Error codes and diagnostics ***
[2025-04-04 07:37:15]     "exeErrorCode": 0,
[2025-04-04 07:37:15]     "exeErrorDiag": "",
[2025-04-04 07:37:15]     "pilotErrorCode": 0,
[2025-04-04 07:37:15]     "pilotErrorDiag": "",
[2025-04-04 07:37:15]  *** Listing of results directory ***
[2025-04-04 07:37:15] total 412544
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas    495897 Apr  3 23:17 pilot3.tar.gz
[2025-04-04 07:37:15] -rwx------ 1 boincer umatlas     37140 Apr  3 23:23 runpilot2-wrapper.sh
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas      5111 Apr  3 23:23 queuedata.json
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas       100 Apr  4 03:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 07:37:15] -rwxr-xr-x 1 boincer umatlas      7986 Apr  4 03:28 run_atlas
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas       105 Apr  4 03:28 job.xml
[2025-04-04 07:37:15] -rw-r--r-- 2 boincer umatlas 222990325 Apr  4 03:28 EVNT.44004365._000154.pool.root.1
[2025-04-04 07:37:15] -rw-r--r-- 2 boincer umatlas     17569 Apr  4 03:28 start_atlas.sh
[2025-04-04 07:37:15] drwxrwx--x 2 boincer umatlas      4096 Apr  4 03:28 shared
[2025-04-04 07:37:15] -rw-r--r-- 2 boincer umatlas    508874 Apr  4 03:28 input.tar.gz
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas         0 Apr  4 03:28 boinc_lockfile
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas      2548 Apr  4 03:28 pandaJob.out
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas       424 Apr  4 03:28 setup.sh.local
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas    979978 Apr  4 03:29 agis_schedconf.cvmfs.json
[2025-04-04 07:37:15] drwx------ 4 boincer umatlas      4096 Apr  4 03:29 pilot3
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas      6303 Apr  4 07:28 init_data.xml
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas 192297553 Apr  4 07:34 HITS.44004367._011223.pool.root.1
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas       531 Apr  4 07:34 boinc_task_state.xml
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas      1095 Apr  4 07:35 memory_monitor_summary.json
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas   1603525 Apr  4 07:35 agis_ddmendpoints.agis.ALL.json
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas    392146 Apr  4 07:35 log.44004367._011223.job.log.tgz.1
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas        95 Apr  4 07:36 pilot_heartbeat.json
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas      7757 Apr  4 07:36 heartbeat.json
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas      8192 Apr  4 07:37 boinc_mmap_file
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas        28 Apr  4 07:37 wrapper_checkpoint.txt
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas      4549 Apr  4 07:37 pilotlog.txt
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas   1271174 Apr  4 07:37 log.44004367._011223.job.log.1
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas       357 Apr  4 07:37 output.list
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas       620 Apr  4 07:37 runtime_log
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas   1679360 Apr  4 07:37 result.tar.gz
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas     11009 Apr  4 07:37 runtime_log.err
[2025-04-04 07:37:15] -rw------- 1 boincer umatlas       662 Apr  4 07:37 rPpKDmQpmK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmTUtKDmr9Pdyn.diag
[2025-04-04 07:37:15] -rw-r--r-- 1 boincer umatlas     20994 Apr  4 07:37 stderr.txt
[2025-04-04 07:37:16] HITS file was successfully produced:
[2025-04-04 07:37:16] -rw------- 1 boincer umatlas 192297553 Apr  4 07:34 shared/HITS.pool.root.1
[2025-04-04 07:37:16]  *** Contents of shared directory: ***
[2025-04-04 07:37:16] total 407720
[2025-04-04 07:37:16] -rw-r--r-- 2 boincer umatlas 222990325 Apr  4 03:28 ATLAS.root_0
[2025-04-04 07:37:16] -rw-r--r-- 2 boincer umatlas     17569 Apr  4 03:28 start_atlas.sh
[2025-04-04 07:37:16] -rw-r--r-- 2 boincer umatlas    508874 Apr  4 03:28 input.tar.gz
[2025-04-04 07:37:16] -rw------- 1 boincer umatlas 192297553 Apr  4 07:34 HITS.pool.root.1
[2025-04-04 07:37:16] -rw------- 1 boincer umatlas   1679360 Apr  4 07:37 result.tar.gz
07:37:17 (37606): run_atlas exited; CPU time 35874.747636
07:37:17 (37606): called boinc_finish(0)

</stderr_txt>
]]>

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