Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:42:53 (1741088): wrapper (7.7.26015): starting
11:42:53 (1741088): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 11:42:53] Arguments: --nthreads 8
[2025-04-04 11:42:53] Threads: 8
[2025-04-04 11:42:53] Checking for CVMFS
[2025-04-04 11:42:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 11:42:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 11:42:54] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 11:42:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 11:42:54] 2.12.6.0 2420954 2926 156064 144494 1 353 32894763 32935936 23172 16776704 0 14991086 99.491 17214783 20267 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 11:42:54] CVMFS is ok
[2025-04-04 11:42:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 11:42:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 11:42:54] Further information can be found at the LHC@home message board.
[2025-04-04 11:42:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 11:42:54] Checking for apptainer binary...
[2025-04-04 11:42:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 11:42:54] Running /usr/bin/apptainer --version
[2025-04-04 11:42:54] apptainer version 1.4.0-1.el9
[2025-04-04 11:42:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 11:42:54] c6-12-27-4.aglt2.org
[2025-04-04 11:42:54] apptainer works
[2025-04-04 11:42:54] Set ATHENA_PROC_NUMBER=8
[2025-04-04 11:42:54] Set ATHENA_CORE_NUMBER=8
[2025-04-04 11:42:54] Starting ATLAS job with PandaID=6587045948
[2025-04-04 11:42:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 17:06:19]  *** The last 200 lines of the pilot log: ***
[2025-04-04 17:06:19] 2025-04-04 21:06:02,208 | INFO     | intersect: -27050696107.146088
[2025-04-04 17:06:19] 2025-04-04 21:06:02,208 | INFO     | chi2: 4.3097560081925845
[2025-04-04 17:06:19] 2025-04-04 21:06:02,209 | INFO     | sum of square deviations: 9417286349.30447
[2025-04-04 17:06:19] 2025-04-04 21:06:02,212 | INFO     | sum of deviations: 168971049354.45502
[2025-04-04 17:06:19] 2025-04-04 21:06:02,212 | INFO     | mean x: 1743790940.5929487
[2025-04-04 17:06:19] 2025-04-04 21:06:02,212 | INFO     | mean y: 2350746.5705128205
[2025-04-04 17:06:19] 2025-04-04 21:06:02,212 | INFO     | -- intersect: -31285875410.908974
[2025-04-04 17:06:19] 2025-04-04 21:06:02,212 | INFO     | intersect: -31285875410.908974
[2025-04-04 17:06:19] 2025-04-04 21:06:02,213 | INFO     | chi2: 3.6351304689335584
[2025-04-04 17:06:19] 2025-04-04 21:06:02,213 | INFO     | current chi2=3.6351304689335584 (change=15.653450867673344 %)
[2025-04-04 17:06:19] 2025-04-04 21:06:02,213 | INFO     | right removable region: 311
[2025-04-04 17:06:19] 2025-04-04 21:06:02,214 | INFO     | sum of square deviations: 9417268659.30447
[2025-04-04 17:06:19] 2025-04-04 21:06:02,216 | INFO     | sum of deviations: 80721969524.4006
[2025-04-04 17:06:19] 2025-04-04 21:06:02,216 | INFO     | mean x: 1743791245.5929487
[2025-04-04 17:06:19] 2025-04-04 21:06:02,217 | INFO     | mean y: 2369589.7275641025
[2025-04-04 17:06:19] 2025-04-04 21:06:02,217 | INFO     | -- intersect: -14944879859.781805
[2025-04-04 17:06:19] 2025-04-04 21:06:02,217 | INFO     | intersect: -14944879859.781805
[2025-04-04 17:06:19] 2025-04-04 21:06:02,217 | INFO     | chi2: 2.0223181894340283
[2025-04-04 17:06:19] 2025-04-04 21:06:02,217 | INFO     | current chi2=2.0223181894340283 (change=53.07580787428049 %)
[2025-04-04 17:06:19] 2025-04-04 21:06:02,218 | INFO     | sum of square deviations: 8971707274.260601
[2025-04-04 17:06:19] 2025-04-04 21:06:02,220 | INFO     | sum of deviations: 34773075600.2475
[2025-04-04 17:06:19] 2025-04-04 21:06:02,220 | INFO     | mean x: 1743791398.0944626
[2025-04-04 17:06:19] 2025-04-04 21:06:02,221 | INFO     | mean y: 2385316.4397394136
[2025-04-04 17:06:19] 2025-04-04 21:06:02,221 | INFO     | -- intersect: -6756304893.055243
[2025-04-04 17:06:19] 2025-04-04 21:06:02,221 | INFO     | intersect: -6756304893.055243
[2025-04-04 17:06:19] 2025-04-04 21:06:02,221 | INFO     | chi2: 1.2206984783298713
[2025-04-04 17:06:19] 2025-04-04 21:06:02,221 | INFO     | current chi2=1.2206984783298713 (change=39.63865406009628 %)
[2025-04-04 17:06:19] 2025-04-04 21:06:02,222 | INFO     | sum of square deviations: 8540443708.903986
[2025-04-04 17:06:19] 2025-04-04 21:06:02,224 | INFO     | sum of deviations: 1906548206.4602585
[2025-04-04 17:06:19] 2025-04-04 21:06:02,224 | INFO     | mean x: 1743791550.5927153
[2025-04-04 17:06:19] 2025-04-04 21:06:02,224 | INFO     | mean y: 2396896.572847682
[2025-04-04 17:06:19] 2025-04-04 21:06:02,224 | INFO     | -- intersect: -386882954.28044605
[2025-04-04 17:06:19] 2025-04-04 21:06:02,224 | INFO     | intersect: -386882954.28044605
[2025-04-04 17:06:19] 2025-04-04 21:06:02,225 | INFO     | chi2: 0.7184603561067684
[2025-04-04 17:06:19] 2025-04-04 21:06:02,225 | INFO     | current chi2=0.7184603561067684 (change=41.14350358740943 %)
[2025-04-04 17:06:19] 2025-04-04 21:06:02,225 | INFO     | sum of square deviations: 8123245583.723938
[2025-04-04 17:06:19] 2025-04-04 21:06:02,227 | INFO     | sum of deviations: -324745230.43096924
[2025-04-04 17:06:19] 2025-04-04 21:06:02,228 | INFO     | mean x: 1743791703.087542
[2025-04-04 17:06:19] 2025-04-04 21:06:02,228 | INFO     | mean y: 2397695.4781144783
[2025-04-04 17:06:19] 2025-04-04 21:06:02,228 | INFO     | -- intersect: 72109737.61770135
[2025-04-04 17:06:19] 2025-04-04 21:06:02,228 | INFO     | intersect: 72109737.61770135
[2025-04-04 17:06:19] 2025-04-04 21:06:02,228 | INFO     | chi2: 0.7061070606408275
[2025-04-04 17:06:19] 2025-04-04 21:06:02,229 | INFO     | current chi2=0.7061070606408275 (change=1.7194122627560946 %)
[2025-04-04 17:06:19] 2025-04-04 21:06:02,229 | INFO     | left removable region: 40
[2025-04-04 17:06:19] 2025-04-04 21:06:02,229 | INFO     | sum of square deviations: 6171209099.667921
[2025-04-04 17:06:19] 2025-04-04 21:06:02,231 | INFO     | sum of deviations: 6994960915.029522
[2025-04-04 17:06:19] 2025-04-04 21:06:02,231 | INFO     | mean x: 1743792130.0701108
[2025-04-04 17:06:19] 2025-04-04 21:06:02,231 | INFO     | mean y: 2407884.6826568265
[2025-04-04 17:06:19] 2025-04-04 21:06:02,231 | INFO     | -- intersect: -1974150938.195809
[2025-04-04 17:06:19] 2025-04-04 21:06:02,232 | INFO     | intersect: -1974150938.195809
[2025-04-04 17:06:19] 2025-04-04 21:06:02,232 | INFO     | chi2: 0.008543628899666334
[2025-04-04 17:06:19] 2025-04-04 21:06:02,232 | INFO     | -- intersect: -1974150938.195809
[2025-04-04 17:06:19] 2025-04-04 21:06:02,232 | INFO     | current memory leak: 1.13 B/s (using 271 data points, chi2=0.01)
[2025-04-04 17:06:19] 2025-04-04 21:06:02,233 | INFO     | ..............................
[2025-04-04 17:06:19] 2025-04-04 21:06:02,233 | INFO     | . Timing measurements:
[2025-04-04 17:06:19] 2025-04-04 21:06:02,233 | INFO     | . get job = 0 s
[2025-04-04 17:06:19] 2025-04-04 21:06:02,233 | INFO     | . initial setup = 3 s
[2025-04-04 17:06:19] 2025-04-04 21:06:02,233 | INFO     | . payload setup = 14 s
[2025-04-04 17:06:19] 2025-04-04 21:06:02,233 | INFO     | . stage-in = 0 s
[2025-04-04 17:06:19] 2025-04-04 21:06:02,234 | INFO     | . payload execution = 19309 s
[2025-04-04 17:06:19] 2025-04-04 21:06:02,234 | INFO     | . stage-out = 2 s
[2025-04-04 17:06:19] 2025-04-04 21:06:02,234 | INFO     | . log creation = 0 s
[2025-04-04 17:06:19] 2025-04-04 21:06:02,234 | INFO     | ..............................
[2025-04-04 17:06:19] 2025-04-04 21:06:02,575 | INFO     | 
[2025-04-04 17:06:19] 2025-04-04 21:06:02,575 | INFO     | job summary report
[2025-04-04 17:06:19] 2025-04-04 21:06:02,575 | INFO     | --------------------------------------------------
[2025-04-04 17:06:19] 2025-04-04 21:06:02,575 | INFO     | PanDA job id: 6587045948
[2025-04-04 17:06:19] 2025-04-04 21:06:02,576 | INFO     | task id: 44004367
[2025-04-04 17:06:19] 2025-04-04 21:06:02,576 | INFO     | errors: (none)
[2025-04-04 17:06:19] 2025-04-04 21:06:02,576 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 17:06:19] 2025-04-04 21:06:02,576 | INFO     | pilot state: finished 
[2025-04-04 17:06:19] 2025-04-04 21:06:02,576 | INFO     | transexitcode: 0
[2025-04-04 17:06:19] 2025-04-04 21:06:02,576 | INFO     | exeerrorcode: 0
[2025-04-04 17:06:19] 2025-04-04 21:06:02,576 | INFO     | exeerrordiag: 
[2025-04-04 17:06:19] 2025-04-04 21:06:02,576 | INFO     | exitcode: 0
[2025-04-04 17:06:19] 2025-04-04 21:06:02,576 | INFO     | exitmsg: OK
[2025-04-04 17:06:19] 2025-04-04 21:06:02,576 | INFO     | cpuconsumptiontime: 53875 s
[2025-04-04 17:06:19] 2025-04-04 21:06:02,577 | INFO     | nevents: 400
[2025-04-04 17:06:19] 2025-04-04 21:06:02,577 | INFO     | neventsw: 0
[2025-04-04 17:06:19] 2025-04-04 21:06:02,577 | INFO     | pid: 1755749
[2025-04-04 17:06:19] 2025-04-04 21:06:02,577 | INFO     | pgrp: 1755749
[2025-04-04 17:06:19] 2025-04-04 21:06:02,577 | INFO     | corecount: 8
[2025-04-04 17:06:19] 2025-04-04 21:06:02,577 | INFO     | event service: False
[2025-04-04 17:06:19] 2025-04-04 21:06:02,577 | INFO     | sizes: {0: 2416442, 1: 2417298, 2: 2417298, 13: 2417326, 15: 2417588, 23: 2417616, 19328: 2450306, 19330: 2459303, 19336: 2459417}
[2025-04-04 17:06:19] 2025-04-04 21:06:02,577 | INFO     | --------------------------------------------------
[2025-04-04 17:06:19] 2025-04-04 21:06:02,577 | INFO     | 
[2025-04-04 17:06:19] 2025-04-04 21:06:02,578 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-04 17:06:19] 2025-04-04 21:06:02,623 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,625 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,625 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,626 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,626 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,626 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 17:06:19] 2025-04-04 21:06:02,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,626 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 17:06:19] 2025-04-04 21:06:02,627 | INFO     | job 6587045948 has completed (purged errors)
[2025-04-04 17:06:19] 2025-04-04 21:06:02,627 | INFO     | overall cleanup function is called
[2025-04-04 17:06:19] 2025-04-04 21:06:02,778 | INFO     | PID=1744888 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-04 17:06:19] 2025-04-04 21:06:02,778 | INFO     | .. there are 26 such processes running
[2025-04-04 17:06:19] 2025-04-04 21:06:03,639 | INFO     | --- collectZombieJob: --- 10, [1755749]
[2025-04-04 17:06:19] 2025-04-04 21:06:03,639 | INFO     | zombie collector waiting for pid 1755749
[2025-04-04 17:06:19] 2025-04-04 21:06:03,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 17:06:19] 2025-04-04 21:06:03,640 | INFO     | collected zombie processes
[2025-04-04 17:06:19] 2025-04-04 21:06:03,640 | INFO     | will attempt to kill all subprocesses of pid=1755749
[2025-04-04 17:06:19] 2025-04-04 21:06:04,140 | INFO     | process IDs to be killed: [1755749] (in reverse order)
[2025-04-04 17:06:19] 2025-04-04 21:06:04,283 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 17:06:19] 2025-04-04 21:06:04,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 17:06:19] 2025-04-04 21:06:04,303 | INFO     | did not find any defunct processes belonging to 1755749
[2025-04-04 17:06:19] 2025-04-04 21:06:04,322 | INFO     | did not find any defunct processes belonging to 1755749
[2025-04-04 17:06:19] 2025-04-04 21:06:04,322 | INFO     | ready for new job
[2025-04-04 17:06:19] 2025-04-04 21:06:04,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 17:06:19] 2025-04-04 21:06:04,324 | INFO     | **************************************
[2025-04-04 17:06:19] 2025-04-04 21:06:04,324 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 17:06:19] 2025-04-04 21:06:04,324 | INFO     | **************************************
[2025-04-04 17:06:19] 2025-04-04 21:06:04,324 | INFO     | 
[2025-04-04 17:06:19] 2025-04-04 21:06:04,344 | INFO     | architecture information:
[2025-04-04 17:06:19] 2025-04-04 21:06:04,344 | INFO     | executing command: cat /etc/os-release
[2025-04-04 17:06:19] 2025-04-04 21:06:04,370 | INFO     | cat /etc/os-release:
[2025-04-04 17:06:19] NAME="CentOS Linux"
[2025-04-04 17:06:19] VERSION="7 (Core)"
[2025-04-04 17:06:19] ID="centos"
[2025-04-04 17:06:19] ID_LIKE="rhel fedora"
[2025-04-04 17:06:19] VERSION_ID="7"
[2025-04-04 17:06:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 17:06:19] ANSI_COLOR="0;31"
[2025-04-04 17:06:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 17:06:19] HOME_URL="https://www.centos.org/"
[2025-04-04 17:06:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 17:06:19] 
[2025-04-04 17:06:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 17:06:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 17:06:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 17:06:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 17:06:19] 
[2025-04-04 17:06:19] 2025-04-04 21:06:04,370 | INFO     | **************************************
[2025-04-04 17:06:19] 2025-04-04 21:06:04,874 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-04 17:06:19] 2025-04-04 21:06:04,936 | INFO     | sufficient remaining disk space (89078628352 B)
[2025-04-04 17:06:19] 2025-04-04 21:06:04,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 17:06:19] 2025-04-04 21:06:04,936 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 17:06:19] 2025-04-04 21:06:04,936 | INFO     | update_server=False
[2025-04-04 17:06:19] 2025-04-04 21:06:04,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 17:06:19] 2025-04-04 21:06:04,937 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 17:06:19] 2025-04-04 21:06:04,937 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 17:06:19] 2025-04-04 21:06:04,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 17:06:19] 2025-04-04 21:06:04,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 17:06:19] 2025-04-04 21:06:05,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 17:06:19] 2025-04-04 21:06:05,255 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-04 17:06:19] 2025-04-04 21:06:05,260 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-04 17:06:19] 2025-04-04 21:06:05,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 17:06:19] 2025-04-04 21:06:05,260 | INFO     | will abort loop
[2025-04-04 17:06:19] 2025-04-04 21:06:05,527 | INFO     | all job control threads have been joined
[2025-04-04 17:06:19] 2025-04-04 21:06:05,626 | INFO     | all payload control threads have been joined
[2025-04-04 17:06:19] 2025-04-04 21:06:05,764 | INFO     | all data control threads have been joined
[2025-04-04 17:06:19] 2025-04-04 21:06:05,942 | INFO     | [job] retrieve thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:05,944 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:05,967 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:06,111 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:06,130 | INFO     | [job] validate thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:06,266 | INFO     | [job] job monitor thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:06,533 | INFO     | [job] control thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:06,639 | INFO     | [payload] control thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:06,763 | INFO     | [payload] validate_post thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:06,764 | INFO     | [data] copytool_in thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:06,770 | INFO     | [data] control thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:07,072 | INFO     | [data] copytool_out thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:07,253 | INFO     | [payload] failed_post thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:07,367 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:07,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 17:06:19] 2025-04-04 21:06:07,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 17:06:19] 2025-04-04 21:06:08,393 | INFO     | [job] queue monitor thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:11,679 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 17:06:19] 2025-04-04 21:06:13,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564971693888)>', '<ExcThread(monitor, started 140564330698496)>']
[2025-04-04 17:06:19] 2025-04-04 21:06:13,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 17:06:19] 2025-04-04 21:06:13,987 | INFO     | [monitor] control thread has ended
[2025-04-04 17:06:19] 2025-04-04 21:06:18,236 | INFO     | all workflow threads have been joined
[2025-04-04 17:06:19] 2025-04-04 21:06:18,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 17:06:19] 2025-04-04 21:06:18,237 | INFO     | traces error code: 0
[2025-04-04 17:06:19] 2025-04-04 21:06:18,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 17:06:19] 2025-04-04 21:06:18,689 [wrapper] ==== pilot stdout END ====
[2025-04-04 17:06:19] 2025-04-04 21:06:18,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 17:06:19] 2025-04-04 21:06:18,699 [wrapper] pilotpid: 1744888
[2025-04-04 17:06:19] 2025-04-04 21:06:18,703 [wrapper] Pilot exit status: 0
[2025-04-04 17:06:19] 2025-04-04 21:06:18,746 [wrapper] pandaids: 6587045948
[2025-04-04 17:06:19] 2025-04-04 21:06:18,846 [wrapper] cleanup supervisor_pilot 3308251 1744889
[2025-04-04 17:06:19] 2025-04-04 21:06:18,857 [wrapper] Test setup, not cleaning
[2025-04-04 17:06:19] 2025-04-04 21:06:18,860 [wrapper] apfmon messages muted
[2025-04-04 17:06:19] 2025-04-04 21:06:18,869 [wrapper] ==== wrapper stdout END ====
[2025-04-04 17:06:19] 2025-04-04 21:06:18,872 [wrapper] ==== wrapper stderr END ====
[2025-04-04 17:06:19]  *** Error codes and diagnostics ***
[2025-04-04 17:06:19]     "exeErrorCode": 0,
[2025-04-04 17:06:19]     "exeErrorDiag": "",
[2025-04-04 17:06:19]     "pilotErrorCode": 0,
[2025-04-04 17:06:19]     "pilotErrorDiag": "",
[2025-04-04 17:06:19]  *** Listing of results directory ***
[2025-04-04 17:06:19] total 417184
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 23:01 pilot3.tar.gz
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 23:13 queuedata.json
[2025-04-04 17:06:19] -rwx------. 1 boincer umatlas     37140 Apr  3 23:15 runpilot2-wrapper.sh
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas       100 Apr  4 11:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 17:06:19] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 11:42 run_atlas
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas       105 Apr  4 11:42 job.xml
[2025-04-04 17:06:19] -rw-r--r--. 2 boincer umatlas 218931200 Apr  4 11:42 EVNT.44004365._000205.pool.root.1
[2025-04-04 17:06:19] -rw-r--r--. 2 boincer umatlas    508885 Apr  4 11:42 input.tar.gz
[2025-04-04 17:06:19] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 11:42 start_atlas.sh
[2025-04-04 17:06:19] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 11:42 shared
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas         0 Apr  4 11:42 boinc_lockfile
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas      2547 Apr  4 11:42 pandaJob.out
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas       467 Apr  4 11:42 setup.sh.local
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas    979669 Apr  4 11:43 agis_schedconf.cvmfs.json
[2025-04-04 17:06:19] drwx------. 4 boincer umatlas      4096 Apr  4 11:43 pilot3
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas      6859 Apr  4 17:03 init_data.xml
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas 200507398 Apr  4 17:05 HITS.44004367._011194.pool.root.1
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas       531 Apr  4 17:05 boinc_task_state.xml
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas        95 Apr  4 17:05 pilot_heartbeat.json
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas      1056 Apr  4 17:05 memory_monitor_summary.json
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas   1603525 Apr  4 17:05 agis_ddmendpoints.agis.ALL.json
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas    422985 Apr  4 17:05 log.44004367._011194.job.log.tgz.1
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas      7749 Apr  4 17:06 heartbeat.json
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 17:06 boinc_mmap_file
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas        28 Apr  4 17:06 wrapper_checkpoint.txt
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas      4662 Apr  4 17:06 pilotlog.txt
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas   1533669 Apr  4 17:06 log.44004367._011194.job.log.1
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas       357 Apr  4 17:06 output.list
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas       620 Apr  4 17:06 runtime_log
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas   1976320 Apr  4 17:06 result.tar.gz
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas     11429 Apr  4 17:06 runtime_log.err
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas       664 Apr  4 17:06 a7LKDmihmK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmAUtKDmaKVVAn.diag
[2025-04-04 17:06:19] -rw-r--r--. 1 boincer umatlas     21057 Apr  4 17:06 stderr.txt
[2025-04-04 17:06:19] HITS file was successfully produced:
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas 200507398 Apr  4 17:05 shared/HITS.pool.root.1
[2025-04-04 17:06:19]  *** Contents of shared directory: ***
[2025-04-04 17:06:19] total 412072
[2025-04-04 17:06:19] -rw-r--r--. 2 boincer umatlas 218931200 Apr  4 11:42 ATLAS.root_0
[2025-04-04 17:06:19] -rw-r--r--. 2 boincer umatlas    508885 Apr  4 11:42 input.tar.gz
[2025-04-04 17:06:19] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 11:42 start_atlas.sh
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas 200507398 Apr  4 17:05 HITS.pool.root.1
[2025-04-04 17:06:19] -rw-------. 1 boincer umatlas   1976320 Apr  4 17:06 result.tar.gz
17:06:20 (1741088): run_atlas exited; CPU time 54755.952241
17:06:20 (1741088): called boinc_finish(0)

</stderr_txt>
]]>

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