Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:10:07 (3917988): wrapper (7.7.26015): starting
05:10:07 (3917988): wrapper: running run_atlas (--nthreads 12)
[2025-04-06 05:10:07] Arguments: --nthreads 12
[2025-04-06 05:10:07] Threads: 12
[2025-04-06 05:10:07] Checking for CVMFS
[2025-04-06 05:10:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-06 05:10:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-06 05:10:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-06 05:10:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-06 05:10:08] 2.12.7.0 3477254 1351 63568 144551 1 56 2578358 4096000 0 130560 0 1205306 99.991 354244 1994 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-06 05:10:08] CVMFS is ok
[2025-04-06 05:10:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-06 05:10:08] Checking for apptainer binary...
[2025-04-06 05:10:08] apptainer is not installed, using version from CVMFS
[2025-04-06 05:10:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-06 05:10:08] ryzen7
[2025-04-06 05:10:08] apptainer works
[2025-04-06 05:10:08] Set ATHENA_PROC_NUMBER=12
[2025-04-06 05:10:08] Set ATHENA_CORE_NUMBER=12
[2025-04-06 05:10:08] Starting ATLAS job with PandaID=6586324273
[2025-04-06 05:10:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-06 06:31:18]  *** The last 200 lines of the pilot log: ***
[2025-04-06 06:31:18]  protocol_id=None
[2025-04-06 06:31:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-06 06:31:18]  replicas=None
[2025-04-06 06:31:18]  scope=mc23_13p6TeV
[2025-04-06 06:31:18]  status=None
[2025-04-06 06:31:18]  status_code=0
[2025-04-06 06:31:18]  storage_token=
[2025-04-06 06:31:18]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586324273/log.43634898._017736.job.log.tgz.1
[2025-04-06 06:31:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/b6/log.43634898._017736.job.log.tgz.1
[2025-04-06 06:31:18]  workdir=None
[2025-04-06 06:31:18] ]
[2025-04-06 06:31:18] 2025-04-06 06:30:48,444 | INFO     | transferring file log.43634898._017736.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586324273/log.43634898._017736.job.log.tgz.1 t
[2025-04-06 06:31:18] 2025-04-06 06:30:48,444 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586324273/log.43634898._017736.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-06 06:31:18] 2025-04-06 06:30:48,453 | INFO     | adding to output.list: log.43634898._017736.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/b6/log.43634898._017736.job.log.tg
[2025-04-06 06:31:18] 2025-04-06 06:30:48,453 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-06 06:31:18] 2025-04-06 06:30:48,453 | INFO     | summary of transferred files:
[2025-04-06 06:31:18] 2025-04-06 06:30:48,453 | INFO     |  -- lfn=log.43634898._017736.job.log.tgz.1, status_code=0, status=transferred
[2025-04-06 06:31:18] 2025-04-06 06:30:48,453 | INFO     | stage-out finished correctly
[2025-04-06 06:31:18] 2025-04-06 06:30:48,558 | INFO     | number of running child processes to parent process 3928224: 1
[2025-04-06 06:31:18] 2025-04-06 06:30:48,558 | INFO     | maximum number of monitored processes: 6
[2025-04-06 06:31:18] 2025-04-06 06:30:50,442 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-06 06:31:18] 2025-04-06 06:30:50,498 | INFO     | job 6586324273 has state=finished
[2025-04-06 06:31:18] 2025-04-06 06:30:50,498 | INFO     | preparing for final server update for job 6586324273 in state='finished'
[2025-04-06 06:31:18] 2025-04-06 06:30:51,061 | INFO     | monitor loop #361: job 0:6586324273 is in state 'finished'
[2025-04-06 06:31:18] 2025-04-06 06:30:51,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 06:31:18] 2025-04-06 06:30:51,211 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-06 06:31:18] 2025-04-06 06:30:51,211 | INFO     | this job has now completed (state=finished)
[2025-04-06 06:31:18] 2025-04-06 06:30:51,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-06 06:31:18] 2025-04-06 06:30:51,211 | INFO     | log transfer has been attempted: DONE
[2025-04-06 06:31:18] 2025-04-06 06:30:51,211 | INFO     | job 6586324273 has finished - writing final server update
[2025-04-06 06:31:18] 2025-04-06 06:30:51,212 | INFO     | total number of processed events: 400 (read)
[2025-04-06 06:31:18] 2025-04-06 06:30:51,231 | INFO     | executing command: lscpu
[2025-04-06 06:31:18] 2025-04-06 06:30:51,246 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-06 06:31:18] 2025-04-06 06:30:53,566 | INFO     | monitor loop #362: job 0:6586324273 is in state 'finished'
[2025-04-06 06:31:18] 2025-04-06 06:30:53,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 06:31:18] 2025-04-06 06:30:56,072 | INFO     | monitor loop #363: job 0:6586324273 is in state 'finished'
[2025-04-06 06:31:18] 2025-04-06 06:30:56,073 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 06:31:18] 2025-04-06 06:30:58,574 | INFO     | monitor loop #364: job 0:6586324273 is in state 'finished'
[2025-04-06 06:31:18] 2025-04-06 06:30:58,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 06:31:18] 2025-04-06 06:30:58,725 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-06 06:31:18] 2025-04-06 06:30:58,725 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586324273/memory_monitor_summary.json (trf name=prmon)
[2025-04-06 06:31:18] 2025-04-06 06:30:58,726 | INFO     | extracted standard info from prmon json
[2025-04-06 06:31:18] 2025-04-06 06:30:58,726 | INFO     | extracted standard memory fields from prmon json
[2025-04-06 06:31:18] 2025-04-06 06:30:58,726 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-06 06:31:18] 2025-04-06 06:30:58,726 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-06 06:31:18] 2025-04-06 06:30:58,726 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-06 06:31:18] 2025-04-06 06:30:58,728 | INFO     | fitting pss+swap vs Time
[2025-04-06 06:31:18] 2025-04-06 06:30:58,728 | INFO     | sum of square deviations: 115715658.0
[2025-04-06 06:31:18] 2025-04-06 06:30:58,728 | INFO     | sum of deviations: 20168870724.999996
[2025-04-06 06:31:18] 2025-04-06 06:30:58,728 | INFO     | mean x: 1743918716.5
[2025-04-06 06:31:18] 2025-04-06 06:30:58,728 | INFO     | mean y: 2747249.6666666665
[2025-04-06 06:31:18] 2025-04-06 06:30:58,728 | INFO     | -- intersect: -303956732011.0952
[2025-04-06 06:31:18] 2025-04-06 06:30:58,728 | INFO     | intersect: -303956732011.0952
[2025-04-06 06:31:18] 2025-04-06 06:30:58,728 | INFO     | chi2: 2.3808884006623368
[2025-04-06 06:31:18] 2025-04-06 06:30:58,728 | INFO     | -- intersect: -303956732011.0952
[2025-04-06 06:31:18] 2025-04-06 06:30:58,729 | INFO     | current memory leak: 174.30 B/s (using 72 data points, chi2=2.38)
[2025-04-06 06:31:18] 2025-04-06 06:30:58,729 | INFO     | ..............................
[2025-04-06 06:31:18] 2025-04-06 06:30:58,729 | INFO     | . Timing measurements:
[2025-04-06 06:31:18] 2025-04-06 06:30:58,729 | INFO     | . get job = 0 s
[2025-04-06 06:31:18] 2025-04-06 06:30:58,729 | INFO     | . initial setup = 1 s
[2025-04-06 06:31:18] 2025-04-06 06:30:58,729 | INFO     | . payload setup = 5 s
[2025-04-06 06:31:18] 2025-04-06 06:30:58,729 | INFO     | . stage-in = 0 s
[2025-04-06 06:31:18] 2025-04-06 06:30:58,729 | INFO     | . payload execution = 4805 s
[2025-04-06 06:31:18] 2025-04-06 06:30:58,729 | INFO     | . stage-out = 0 s
[2025-04-06 06:31:18] 2025-04-06 06:30:58,729 | INFO     | . log creation = 0 s
[2025-04-06 06:31:18] 2025-04-06 06:30:58,729 | INFO     | ..............................
[2025-04-06 06:31:18] 2025-04-06 06:30:58,868 | INFO     | 
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | job summary report
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | --------------------------------------------------
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | PanDA job id: 6586324273
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | task id: 43634898
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | errors: (none)
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | pilot state: finished 
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | transexitcode: 0
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | exeerrorcode: 0
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | exeerrordiag: 
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | exitcode: 0
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | exitmsg: OK
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | cpuconsumptiontime: 43467 s
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | nevents: 400
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | neventsw: 0
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | pid: 3928224
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | pgrp: 3928224
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | corecount: 12
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | event service: False
[2025-04-06 06:31:18] 2025-04-06 06:30:58,869 | INFO     | sizes: {0: 2417422, 5: 2417628, 11: 2417684, 4814: 2443787, 4815: 2452802, 4817: 2452858, 4825: 2453156}
[2025-04-06 06:31:18] 2025-04-06 06:30:58,870 | INFO     | --------------------------------------------------
[2025-04-06 06:31:18] 2025-04-06 06:30:58,870 | INFO     | 
[2025-04-06 06:31:18] 2025-04-06 06:30:58,870 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 06:31:18] 2025-04-06 06:30:58,880 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,880 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-06 06:31:18] 2025-04-06 06:30:58,882 | INFO     | job 6586324273 has completed (purged errors)
[2025-04-06 06:31:18] 2025-04-06 06:30:58,882 | INFO     | overall cleanup function is called
[2025-04-06 06:31:18] 2025-04-06 06:30:59,886 | INFO     | --- collectZombieJob: --- 10, [3928224]
[2025-04-06 06:31:18] 2025-04-06 06:30:59,886 | INFO     | zombie collector waiting for pid 3928224
[2025-04-06 06:31:18] 2025-04-06 06:30:59,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-06 06:31:18] 2025-04-06 06:30:59,886 | INFO     | collected zombie processes
[2025-04-06 06:31:18] 2025-04-06 06:30:59,886 | INFO     | will attempt to kill all subprocesses of pid=3928224
[2025-04-06 06:31:18] 2025-04-06 06:30:59,962 | INFO     | process IDs to be killed: [3928224] (in reverse order)
[2025-04-06 06:31:18] 2025-04-06 06:30:59,997 | WARNING  | found no corresponding commands to process id(s)
[2025-04-06 06:31:18] 2025-04-06 06:30:59,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-06 06:31:18] 2025-04-06 06:30:59,999 | INFO     | did not find any defunct processes belonging to 3928224
[2025-04-06 06:31:18] 2025-04-06 06:31:00,001 | INFO     | did not find any defunct processes belonging to 3928224
[2025-04-06 06:31:18] 2025-04-06 06:31:00,001 | INFO     | ready for new job
[2025-04-06 06:31:18] 2025-04-06 06:31:00,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-06 06:31:18] 2025-04-06 06:31:00,002 | INFO     | **************************************
[2025-04-06 06:31:18] 2025-04-06 06:31:00,002 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-06 06:31:18] 2025-04-06 06:31:00,002 | INFO     | **************************************
[2025-04-06 06:31:18] 2025-04-06 06:31:00,002 | INFO     | 
[2025-04-06 06:31:18] 2025-04-06 06:31:00,023 | INFO     | architecture information:
[2025-04-06 06:31:18] 2025-04-06 06:31:00,023 | INFO     | executing command: cat /etc/os-release
[2025-04-06 06:31:18] 2025-04-06 06:31:00,029 | INFO     | cat /etc/os-release:
[2025-04-06 06:31:18] NAME="CentOS Linux"
[2025-04-06 06:31:18] VERSION="7 (Core)"
[2025-04-06 06:31:18] ID="centos"
[2025-04-06 06:31:18] ID_LIKE="rhel fedora"
[2025-04-06 06:31:18] VERSION_ID="7"
[2025-04-06 06:31:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-06 06:31:18] ANSI_COLOR="0;31"
[2025-04-06 06:31:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-06 06:31:18] HOME_URL="https://www.centos.org/"
[2025-04-06 06:31:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-06 06:31:18] 
[2025-04-06 06:31:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-06 06:31:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-06 06:31:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-06 06:31:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-06 06:31:18] 
[2025-04-06 06:31:18] 2025-04-06 06:31:00,030 | INFO     | **************************************
[2025-04-06 06:31:18] 2025-04-06 06:31:00,530 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 06:31:18] 2025-04-06 06:31:00,537 | INFO     | sufficient remaining disk space (176153427968 B)
[2025-04-06 06:31:18] 2025-04-06 06:31:00,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-06 06:31:18] 2025-04-06 06:31:00,537 | INFO     | current server update state: UPDATING_FINAL
[2025-04-06 06:31:18] 2025-04-06 06:31:00,537 | INFO     | update_server=False
[2025-04-06 06:31:18] 2025-04-06 06:31:00,538 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-06 06:31:18] 2025-04-06 06:31:00,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-06 06:31:18] 2025-04-06 06:31:00,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-06 06:31:18] 2025-04-06 06:31:00,538 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-06 06:31:18] 2025-04-06 06:31:00,538 | INFO     | aborting loop
[2025-04-06 06:31:18] 2025-04-06 06:31:00,538 | INFO     | found 0 job(s) in 20 queues
[2025-04-06 06:31:18] 2025-04-06 06:31:00,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-06 06:31:18] 2025-04-06 06:31:00,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-06 06:31:18] 2025-04-06 06:31:00,621 | INFO     | all data control threads have been joined
[2025-04-06 06:31:18] 2025-04-06 06:31:01,009 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-06 06:31:18] 2025-04-06 06:31:01,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-06 06:31:18] 2025-04-06 06:31:01,542 | INFO     | [job] job monitor thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:01,542 | INFO     | [job] retrieve thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:01,542 | INFO     | [job] queue monitor thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:01,626 | INFO     | [data] control thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:01,732 | INFO     | all job control threads have been joined
[2025-04-06 06:31:18] 2025-04-06 06:31:01,810 | INFO     | [payload] execute_payloads thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:01,894 | INFO     | [data] copytool_in thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:01,914 | INFO     | all payload control threads have been joined
[2025-04-06 06:31:18] 2025-04-06 06:31:02,166 | INFO     | [payload] failed_post thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:02,730 | INFO     | [payload] validate_pre thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:02,734 | INFO     | [job] control thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:02,774 | INFO     | [payload] validate_post thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:02,818 | INFO     | [job] validate thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:02,918 | INFO     | [payload] control thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:02,998 | INFO     | [job] create_data_payload thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:03,522 | INFO     | [data] copytool_out thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:05,014 | INFO     | [data] queue_monitor thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:10,738 | INFO     | job.realtimelogging is not enabled
[2025-04-06 06:31:18] 2025-04-06 06:31:11,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-06 06:31:18] 2025-04-06 06:31:13,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139869549782848)>', '<ExcThread(monitor, started 139868864755456)>']
[2025-04-06 06:31:18] 2025-04-06 06:31:14,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-06 06:31:18] 2025-04-06 06:31:14,594 | INFO     | [monitor] control thread has ended
[2025-04-06 06:31:18] 2025-04-06 06:31:18,614 | INFO     | all workflow threads have been joined
[2025-04-06 06:31:18] 2025-04-06 06:31:18,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-06 06:31:18] 2025-04-06 06:31:18,614 | INFO     | traces error code: 0
[2025-04-06 06:31:18] 2025-04-06 06:31:18,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-06 06:31:18] 2025-04-06 06:31:18,668 [wrapper] ==== pilot stdout END ====
[2025-04-06 06:31:18] 2025-04-06 06:31:18,675 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-06 06:31:18] 2025-04-06 06:31:18,676 [wrapper] pilotpid: 3921692
[2025-04-06 06:31:18] 2025-04-06 06:31:18,682 [wrapper] Pilot exit status: 0
[2025-04-06 06:31:18] 2025-04-06 06:31:18,699 [wrapper] pandaids: 6586324273
[2025-04-06 06:31:18] 2025-04-06 06:31:18,719 [wrapper] cleanup supervisor_pilot 3940111 3921693
[2025-04-06 06:31:18] 2025-04-06 06:31:18,720 [wrapper] Test setup, not cleaning
[2025-04-06 06:31:18] 2025-04-06 06:31:18,723 [wrapper] apfmon messages muted
[2025-04-06 06:31:18] 2025-04-06 06:31:18,727 [wrapper] ==== wrapper stdout END ====
[2025-04-06 06:31:18] 2025-04-06 06:31:18,728 [wrapper] ==== wrapper stderr END ====
[2025-04-06 06:31:18]  *** Error codes and diagnostics ***
[2025-04-06 06:31:18]     "exeErrorCode": 0,
[2025-04-06 06:31:18]     "exeErrorDiag": "",
[2025-04-06 06:31:18]     "pilotErrorCode": 0,
[2025-04-06 06:31:18]     "pilotErrorDiag": "",
[2025-04-06 06:31:18]  *** Listing of results directory ***
[2025-04-06 06:31:18] total 669028
[2025-04-06 06:31:18] -rw-r--r-- 1 boinc boinc    495897 Apr  3 20:51 pilot3.tar.gz
[2025-04-06 06:31:18] -rwx------ 1 boinc boinc     37140 Apr  3 21:05 runpilot2-wrapper.sh
[2025-04-06 06:31:18] -rw-r--r-- 1 boinc boinc      5111 Apr  3 21:05 queuedata.json
[2025-04-06 06:31:18] -rw-rw-r-- 1 boinc boinc       100 Apr  6 05:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-06 06:31:18] -rwxr-xr-x 1 boinc boinc      7986 Apr  6 05:10 run_atlas
[2025-04-06 06:31:18] -rw-rw-r-- 1 boinc boinc       105 Apr  6 05:10 job.xml
[2025-04-06 06:31:18] -rw-r--r-- 2 boinc boinc     17569 Apr  6 05:10 start_atlas.sh
[2025-04-06 06:31:18] drwxrwx--x 2 boinc boinc      4096 Apr  6 05:10 shared
[2025-04-06 06:31:18] -rw-r--r-- 2 boinc boinc    508888 Apr  6 05:10 input.tar.gz
[2025-04-06 06:31:18] -rw-rw-r-- 1 boinc boinc      9677 Apr  6 05:10 init_data.xml
[2025-04-06 06:31:18] -rw-r--r-- 2 boinc boinc 358216780 Apr  6 05:10 EVNT.43634896._000680.pool.root.1
[2025-04-06 06:31:18] -rw-rw-r-- 1 boinc boinc         0 Apr  6 05:10 boinc_lockfile
[2025-04-06 06:31:18] -rw-rw-r-- 1 boinc boinc      2599 Apr  6 05:10 pandaJob.out
[2025-04-06 06:31:18] -rw------- 1 boinc boinc       424 Apr  6 05:10 setup.sh.local
[2025-04-06 06:31:18] -rw------- 1 boinc boinc    980067 Apr  6 05:10 agis_schedconf.cvmfs.json
[2025-04-06 06:31:18] -rw------- 1 boinc boinc   1603525 Apr  6 05:10 agis_ddmendpoints.agis.ALL.json
[2025-04-06 06:31:18] drwx------ 4 boinc boinc      4096 Apr  6 05:10 pilot3
[2025-04-06 06:31:18] -rw------- 1 boinc boinc        95 Apr  6 06:30 pilot_heartbeat.json
[2025-04-06 06:31:18] -rw------- 1 boinc boinc 321342133 Apr  6 06:30 HITS.43634898._017736.pool.root.1
[2025-04-06 06:31:18] -rw-rw-r-- 1 boinc boinc       531 Apr  6 06:30 boinc_task_state.xml
[2025-04-06 06:31:18] -rw------- 1 boinc boinc      1015 Apr  6 06:30 memory_monitor_summary.json
[2025-04-06 06:31:18] -rw------- 1 boinc boinc    356922 Apr  6 06:30 log.43634898._017736.job.log.tgz.1
[2025-04-06 06:31:18] -rw------- 1 boinc boinc      7648 Apr  6 06:30 heartbeat.json
[2025-04-06 06:31:18] -rw-rw-r-- 1 boinc boinc        27 Apr  6 06:31 wrapper_checkpoint.txt
[2025-04-06 06:31:18] -rw-rw-r-- 1 boinc boinc      8192 Apr  6 06:31 boinc_mmap_file
[2025-04-06 06:31:18] -rw------- 1 boinc boinc      4572 Apr  6 06:31 pilotlog.txt
[2025-04-06 06:31:18] -rw------- 1 boinc boinc    480886 Apr  6 06:31 log.43634898._017736.job.log.1
[2025-04-06 06:31:18] -rw------- 1 boinc boinc       357 Apr  6 06:31 output.list
[2025-04-06 06:31:18] -rw-rw-r-- 1 boinc boinc       620 Apr  6 06:31 runtime_log
[2025-04-06 06:31:18] -rw------- 1 boinc boinc    860160 Apr  6 06:31 result.tar.gz
[2025-04-06 06:31:18] -rw-rw-r-- 1 boinc boinc     11399 Apr  6 06:31 runtime_log.err
[2025-04-06 06:31:18] -rw------- 1 boinc boinc       649 Apr  6 06:31 G85MDmIwgK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDms1HLDmrE9oun.diag
[2025-04-06 06:31:18] -rw-rw-r-- 1 boinc boinc     21531 Apr  6 06:31 stderr.txt
[2025-04-06 06:31:18] HITS file was successfully produced:
[2025-04-06 06:31:18] -rw------- 1 boinc boinc 321342133 Apr  6 06:30 shared/HITS.pool.root.1
[2025-04-06 06:31:18]  *** Contents of shared directory: ***
[2025-04-06 06:31:18] total 665004
[2025-04-06 06:31:18] -rw-r--r-- 2 boinc boinc     17569 Apr  6 05:10 start_atlas.sh
[2025-04-06 06:31:18] -rw-r--r-- 2 boinc boinc    508888 Apr  6 05:10 input.tar.gz
[2025-04-06 06:31:18] -rw-r--r-- 2 boinc boinc 358216780 Apr  6 05:10 ATLAS.root_0
[2025-04-06 06:31:18] -rw------- 1 boinc boinc 321342133 Apr  6 06:30 HITS.pool.root.1
[2025-04-06 06:31:18] -rw------- 1 boinc boinc    860160 Apr  6 06:31 result.tar.gz
06:31:20 (3917988): run_atlas exited; CPU time 43495.852450
06:31:20 (3917988): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN