Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:56:43 (34296): wrapper (7.7.26015): starting
02:56:43 (34296): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 02:56:43] Arguments: --nthreads 8
[2025-04-04 02:56:43] Threads: 8
[2025-04-04 02:56:43] Checking for CVMFS
[2025-04-04 02:56:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 02:56:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 02:56:43] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 02:56:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 02:56:43] 2.11.2.0 135154 20299 187184 144480 3 509 12456230 18432000 11705 130560 0 110297670 99.105 204191258 41786 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-04 02:56:43] CVMFS is ok
[2025-04-04 02:56:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 02:56:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 02:56:43] Further information can be found at the LHC@home message board.
[2025-04-04 02:56:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 02:56:43] Checking for apptainer binary...
[2025-04-04 02:56:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 02:56:43] Running /usr/bin/apptainer --version
[2025-04-04 02:56:44] apptainer version 1.3.2-1.el7
[2025-04-04 02:56:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 02:56:47] c-211-35-3.aglt2.org
[2025-04-04 02:56:47] apptainer works
[2025-04-04 02:56:47] Set ATHENA_PROC_NUMBER=8
[2025-04-04 02:56:47] Set ATHENA_CORE_NUMBER=8
[2025-04-04 02:56:47] Starting ATLAS job with PandaID=6586697608
[2025-04-04 02:56:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 15:12:46]  *** The last 200 lines of the pilot log: ***
[2025-04-04 15:12:46] 2025-04-04 19:12:21,931 | INFO     | intersect: -6132715792.603192
[2025-04-04 15:12:46] 2025-04-04 19:12:21,950 | INFO     | chi2: 8.264438775944038
[2025-04-04 15:12:46] 2025-04-04 19:12:21,952 | INFO     | sum of square deviations: 114294933099.95271
[2025-04-04 15:12:46] 2025-04-04 19:12:22,026 | INFO     | sum of deviations: 604051017027.0587
[2025-04-04 15:12:46] 2025-04-04 19:12:22,026 | INFO     | mean x: 1743771689.5425384
[2025-04-04 15:12:46] 2025-04-04 19:12:22,027 | INFO     | mean y: 2523741.5062761507
[2025-04-04 15:12:46] 2025-04-04 19:12:22,027 | INFO     | -- intersect: -9213344661.076468
[2025-04-04 15:12:46] 2025-04-04 19:12:22,027 | INFO     | intersect: -9213344661.076468
[2025-04-04 15:12:46] 2025-04-04 19:12:22,038 | INFO     | chi2: 5.149257129153261
[2025-04-04 15:12:46] 2025-04-04 19:12:22,039 | INFO     | current chi2=5.149257129153261 (change=37.69380754393614 %)
[2025-04-04 15:12:46] 2025-04-04 19:12:22,040 | INFO     | sum of square deviations: 111920532803.47058
[2025-04-04 15:12:46] 2025-04-04 19:12:22,087 | INFO     | sum of deviations: 599349225186.6193
[2025-04-04 15:12:46] 2025-04-04 19:12:22,088 | INFO     | mean x: 1743771537.0463483
[2025-04-04 15:12:46] 2025-04-04 19:12:22,088 | INFO     | mean y: 2523439.5266853934
[2025-04-04 15:12:46] 2025-04-04 19:12:22,088 | INFO     | -- intersect: -9335603296.042253
[2025-04-04 15:12:46] 2025-04-04 19:12:22,088 | INFO     | intersect: -9335603296.042253
[2025-04-04 15:12:46] 2025-04-04 19:12:22,094 | INFO     | chi2: 5.148694447495756
[2025-04-04 15:12:46] 2025-04-04 19:12:22,095 | INFO     | current chi2=5.148694447495756 (change=0.010927433674254805 %)
[2025-04-04 15:12:46] 2025-04-04 19:12:22,095 | INFO     | right removable region: 711
[2025-04-04 15:12:46] 2025-04-04 19:12:22,096 | INFO     | sum of square deviations: 114294695809.95264
[2025-04-04 15:12:46] 2025-04-04 19:12:22,184 | INFO     | monitor loop #2449: job 0:6586697608 is in state 'finished'
[2025-04-04 15:12:46] 2025-04-04 19:12:22,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 15:12:46] 2025-04-04 19:12:22,221 | INFO     | sum of deviations: 215976427104.05307
[2025-04-04 15:12:46] 2025-04-04 19:12:22,222 | INFO     | mean x: 1743771994.5425384
[2025-04-04 15:12:46] 2025-04-04 19:12:22,222 | INFO     | mean y: 2523824.981868898
[2025-04-04 15:12:46] 2025-04-04 19:12:22,260 | INFO     | -- intersect: -3292586612.090669
[2025-04-04 15:12:46] 2025-04-04 19:12:22,261 | INFO     | intersect: -3292586612.090669
[2025-04-04 15:12:46] 2025-04-04 19:12:22,262 | INFO     | chi2: 5.643870606235948
[2025-04-04 15:12:46] 2025-04-04 19:12:22,262 | INFO     | current chi2=5.643870606235948 (change=31.708967066656562 %)
[2025-04-04 15:12:46] 2025-04-04 19:12:22,271 | INFO     | sum of square deviations: 111920058223.47067
[2025-04-04 15:12:46] 2025-04-04 19:12:22,338 | INFO     | sum of deviations: 60995399923.903076
[2025-04-04 15:12:46] 2025-04-04 19:12:22,338 | INFO     | mean x: 1743772147.0463483
[2025-04-04 15:12:46] 2025-04-04 19:12:22,338 | INFO     | mean y: 2533778.366573034
[2025-04-04 15:12:46] 2025-04-04 19:12:22,338 | INFO     | -- intersect: -947805965.6753938
[2025-04-04 15:12:46] 2025-04-04 19:12:22,338 | INFO     | intersect: -947805965.6753938
[2025-04-04 15:12:46] 2025-04-04 19:12:22,339 | INFO     | chi2: 4.085969442573084
[2025-04-04 15:12:46] 2025-04-04 19:12:22,339 | INFO     | current chi2=4.085969442573084 (change=27.60341744797496 %)
[2025-04-04 15:12:46] 2025-04-04 19:12:22,368 | INFO     | sum of square deviations: 109578537536.96739
[2025-04-04 15:12:46] 2025-04-04 19:12:22,419 | INFO     | sum of deviations: -36593280081.20656
[2025-04-04 15:12:46] 2025-04-04 19:12:22,420 | INFO     | mean x: 1743772299.5502121
[2025-04-04 15:12:46] 2025-04-04 19:12:22,420 | INFO     | mean y: 2540121.710042433
[2025-04-04 15:12:46] 2025-04-04 19:12:22,420 | INFO     | -- intersect: 584865361.5752258
[2025-04-04 15:12:46] 2025-04-04 19:12:22,420 | INFO     | intersect: 584865361.5752258
[2025-04-04 15:12:46] 2025-04-04 19:12:22,421 | INFO     | chi2: 3.3062791104661367
[2025-04-04 15:12:46] 2025-04-04 19:12:22,421 | INFO     | current chi2=3.3062791104661367 (change=19.082138108598976 %)
[2025-04-04 15:12:46] 2025-04-04 19:12:22,421 | INFO     | left removable region: 30
[2025-04-04 15:12:46] 2025-04-04 19:12:22,431 | INFO     | sum of square deviations: 97928040778.93665
[2025-04-04 15:12:46] 2025-04-04 19:12:22,457 | INFO     | sum of deviations: 91141887981.24963
[2025-04-04 15:12:46] 2025-04-04 19:12:22,458 | INFO     | mean x: 1743772421.5697503
[2025-04-04 15:12:46] 2025-04-04 19:12:22,458 | INFO     | mean y: 2557026.4684287813
[2025-04-04 15:12:46] 2025-04-04 19:12:22,458 | INFO     | -- intersect: -1620376603.6475227
[2025-04-04 15:12:46] 2025-04-04 19:12:22,458 | INFO     | intersect: -1620376603.6475227
[2025-04-04 15:12:46] 2025-04-04 19:12:22,468 | INFO     | chi2: 0.006617740917652388
[2025-04-04 15:12:46] 2025-04-04 19:12:22,469 | INFO     | -- intersect: -1620376603.6475227
[2025-04-04 15:12:46] 2025-04-04 19:12:22,469 | INFO     | current memory leak: 0.93 B/s (using 681 data points, chi2=0.01)
[2025-04-04 15:12:46] 2025-04-04 19:12:22,470 | INFO     | ..............................
[2025-04-04 15:12:46] 2025-04-04 19:12:22,470 | INFO     | . Timing measurements:
[2025-04-04 15:12:46] 2025-04-04 19:12:22,470 | INFO     | . get job = 0 s
[2025-04-04 15:12:46] 2025-04-04 19:12:22,470 | INFO     | . initial setup = 2 s
[2025-04-04 15:12:46] 2025-04-04 19:12:22,470 | INFO     | . payload setup = 8 s
[2025-04-04 15:12:46] 2025-04-04 19:12:22,471 | INFO     | . stage-in = 0 s
[2025-04-04 15:12:46] 2025-04-04 19:12:22,471 | INFO     | . payload execution = 44010 s
[2025-04-04 15:12:46] 2025-04-04 19:12:22,471 | INFO     | . stage-out = 8 s
[2025-04-04 15:12:46] 2025-04-04 19:12:22,471 | INFO     | . log creation = 1 s
[2025-04-04 15:12:46] 2025-04-04 19:12:22,471 | INFO     | ..............................
[2025-04-04 15:12:46] 2025-04-04 19:12:22,811 | INFO     | 
[2025-04-04 15:12:46] 2025-04-04 19:12:22,811 | INFO     | job summary report
[2025-04-04 15:12:46] 2025-04-04 19:12:22,811 | INFO     | --------------------------------------------------
[2025-04-04 15:12:46] 2025-04-04 19:12:22,811 | INFO     | PanDA job id: 6586697608
[2025-04-04 15:12:46] 2025-04-04 19:12:22,811 | INFO     | task id: 43634898
[2025-04-04 15:12:46] 2025-04-04 19:12:22,811 | INFO     | errors: (none)
[2025-04-04 15:12:46] 2025-04-04 19:12:22,811 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 15:12:46] 2025-04-04 19:12:22,811 | INFO     | pilot state: finished 
[2025-04-04 15:12:46] 2025-04-04 19:12:22,811 | INFO     | transexitcode: 0
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | exeerrorcode: 0
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | exeerrordiag: 
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | exitcode: 0
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | exitmsg: OK
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | cpuconsumptiontime: 97345 s
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | nevents: 400
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | neventsw: 0
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | pid: 46777
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | pgrp: 46777
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | corecount: 8
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | event service: False
[2025-04-04 15:12:46] 2025-04-04 19:12:22,812 | INFO     | sizes: {0: 2417349, 5: 2417555, 11: 2417611, 44024: 2460899, 44025: 2460898, 44034: 2469895, 44036: 2470079, 44106: 2470249}
[2025-04-04 15:12:46] 2025-04-04 19:12:22,813 | INFO     | --------------------------------------------------
[2025-04-04 15:12:46] 2025-04-04 19:12:22,813 | INFO     | 
[2025-04-04 15:12:46] 2025-04-04 19:12:22,813 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-04-04 15:12:46] 2025-04-04 19:12:23,073 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,073 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,073 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,074 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,074 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,074 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,074 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,074 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,074 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,074 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,074 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,074 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,074 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,075 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,075 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,075 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 15:12:46] 2025-04-04 19:12:23,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,087 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 15:12:46] 2025-04-04 19:12:23,088 | INFO     | job 6586697608 has completed (purged errors)
[2025-04-04 15:12:46] 2025-04-04 19:12:23,088 | INFO     | overall cleanup function is called
[2025-04-04 15:12:46] 2025-04-04 19:12:24,109 | INFO     | --- collectZombieJob: --- 10, [46777]
[2025-04-04 15:12:46] 2025-04-04 19:12:24,109 | INFO     | zombie collector waiting for pid 46777
[2025-04-04 15:12:46] 2025-04-04 19:12:24,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 15:12:46] 2025-04-04 19:12:24,109 | INFO     | collected zombie processes
[2025-04-04 15:12:46] 2025-04-04 19:12:24,110 | INFO     | will attempt to kill all subprocesses of pid=46777
[2025-04-04 15:12:46] 2025-04-04 19:12:26,752 | INFO     | process IDs to be killed: [46777] (in reverse order)
[2025-04-04 15:12:46] 2025-04-04 19:12:27,264 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 15:12:46] 2025-04-04 19:12:27,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 15:12:46] 2025-04-04 19:12:27,558 | INFO     | did not find any defunct processes belonging to 46777
[2025-04-04 15:12:46] 2025-04-04 19:12:27,731 | INFO     | did not find any defunct processes belonging to 46777
[2025-04-04 15:12:46] 2025-04-04 19:12:27,731 | INFO     | ready for new job
[2025-04-04 15:12:46] 2025-04-04 19:12:27,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 15:12:46] 2025-04-04 19:12:27,734 | INFO     | **************************************
[2025-04-04 15:12:46] 2025-04-04 19:12:27,734 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 15:12:46] 2025-04-04 19:12:27,734 | INFO     | **************************************
[2025-04-04 15:12:46] 2025-04-04 19:12:27,734 | INFO     | 
[2025-04-04 15:12:46] 2025-04-04 19:12:27,777 | INFO     | architecture information:
[2025-04-04 15:12:46] 2025-04-04 19:12:27,799 | INFO     | executing command: cat /etc/os-release
[2025-04-04 15:12:46] 2025-04-04 19:12:28,009 | INFO     | cat /etc/os-release:
[2025-04-04 15:12:46] NAME="CentOS Linux"
[2025-04-04 15:12:46] VERSION="7 (Core)"
[2025-04-04 15:12:46] ID="centos"
[2025-04-04 15:12:46] ID_LIKE="rhel fedora"
[2025-04-04 15:12:46] VERSION_ID="7"
[2025-04-04 15:12:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 15:12:46] ANSI_COLOR="0;31"
[2025-04-04 15:12:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 15:12:46] HOME_URL="https://www.centos.org/"
[2025-04-04 15:12:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 15:12:46] 
[2025-04-04 15:12:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 15:12:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 15:12:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 15:12:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 15:12:46] 
[2025-04-04 15:12:46] 2025-04-04 19:12:28,009 | INFO     | **************************************
[2025-04-04 15:12:46] 2025-04-04 19:12:28,099 | INFO     | PID=38184 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-04 15:12:46] 2025-04-04 19:12:28,100 | INFO     | .. there are 25 such processes running
[2025-04-04 15:12:46] 2025-04-04 19:12:28,512 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-04-04 15:12:46] 2025-04-04 19:12:28,637 | INFO     | sufficient remaining disk space (101308170240 B)
[2025-04-04 15:12:46] 2025-04-04 19:12:28,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 15:12:46] 2025-04-04 19:12:28,638 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 15:12:46] 2025-04-04 19:12:28,638 | INFO     | update_server=False
[2025-04-04 15:12:46] 2025-04-04 19:12:28,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 15:12:46] 2025-04-04 19:12:28,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 15:12:46] 2025-04-04 19:12:28,638 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 15:12:46] 2025-04-04 19:12:28,639 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 15:12:46] 2025-04-04 19:12:28,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 15:12:46] 2025-04-04 19:12:28,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 15:12:46] 2025-04-04 19:12:28,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 15:12:46] 2025-04-04 19:12:28,639 | INFO     | aborting loop
[2025-04-04 15:12:46] 2025-04-04 19:12:28,725 | INFO     | all payload control threads have been joined
[2025-04-04 15:12:46] 2025-04-04 19:12:28,928 | INFO     | all data control threads have been joined
[2025-04-04 15:12:46] 2025-04-04 19:12:29,435 | INFO     | all job control threads have been joined
[2025-04-04 15:12:46] 2025-04-04 19:12:29,644 | INFO     | [job] retrieve thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:29,648 | INFO     | [job] queue monitor thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:29,649 | INFO     | [job] job monitor thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:29,730 | INFO     | [payload] control thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:29,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 15:12:46] 2025-04-04 19:12:29,823 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:29,883 | INFO     | [payload] failed_post thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:29,934 | INFO     | [data] control thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:30,278 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:30,282 | INFO     | [job] validate thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:30,441 | INFO     | [job] control thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:30,547 | INFO     | [payload] validate_post thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:30,731 | INFO     | [data] copytool_in thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:30,735 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:31,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:31,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 15:12:46] 2025-04-04 19:12:31,837 | INFO     | [data] copytool_out thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:35,537 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 15:12:46] 2025-04-04 19:12:36,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569280575296)>', '<ExcThread(monitor, started 140568566949632)>']
[2025-04-04 15:12:46] 2025-04-04 19:12:36,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 15:12:46] 2025-04-04 19:12:36,692 | INFO     | [monitor] control thread has ended
[2025-04-04 15:12:46] 2025-04-04 19:12:41,086 | INFO     | all workflow threads have been joined
[2025-04-04 15:12:46] 2025-04-04 19:12:41,086 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 15:12:46] 2025-04-04 19:12:41,087 | INFO     | traces error code: 0
[2025-04-04 15:12:46] 2025-04-04 19:12:41,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 15:12:46] 2025-04-04 19:12:43,467 [wrapper] ==== pilot stdout END ====
[2025-04-04 15:12:46] 2025-04-04 19:12:43,503 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 15:12:46] 2025-04-04 19:12:43,529 [wrapper] pilotpid: 38184
[2025-04-04 15:12:46] 2025-04-04 19:12:43,580 [wrapper] Pilot exit status: 0
[2025-04-04 15:12:46] 2025-04-04 19:12:43,769 [wrapper] pandaids: 6586697608
[2025-04-04 15:12:46] 2025-04-04 19:12:44,283 [wrapper] cleanup supervisor_pilot 215040 38185
[2025-04-04 15:12:46] 2025-04-04 19:12:44,313 [wrapper] Test setup, not cleaning
[2025-04-04 15:12:46] 2025-04-04 19:12:44,341 [wrapper] apfmon messages muted
[2025-04-04 15:12:46] 2025-04-04 19:12:44,382 [wrapper] ==== wrapper stdout END ====
[2025-04-04 15:12:46] 2025-04-04 19:12:44,421 [wrapper] ==== wrapper stderr END ====
[2025-04-04 15:12:46]  *** Error codes and diagnostics ***
[2025-04-04 15:12:46]     "exeErrorCode": 0,
[2025-04-04 15:12:46]     "exeErrorDiag": "",
[2025-04-04 15:12:46]     "pilotErrorCode": 0,
[2025-04-04 15:12:46]     "pilotErrorDiag": "",
[2025-04-04 15:12:46]  *** Listing of results directory ***
[2025-04-04 15:12:46] total 681116
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas    495897 Apr  3 22:31 pilot3.tar.gz
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas      5111 Apr  3 22:36 queuedata.json
[2025-04-04 15:12:46] -rwx------ 1 boincer umatlas     37140 Apr  3 22:37 runpilot2-wrapper.sh
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas       100 Apr  4 02:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 15:12:46] -rwxr-xr-x 1 boincer umatlas      7986 Apr  4 02:56 run_atlas
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas       105 Apr  4 02:56 job.xml
[2025-04-04 15:12:46] -rw-r--r-- 2 boincer umatlas 361045663 Apr  4 02:56 EVNT.43634896._000763.pool.root.1
[2025-04-04 15:12:46] -rw-r--r-- 2 boincer umatlas     17569 Apr  4 02:56 start_atlas.sh
[2025-04-04 15:12:46] drwxrwx--x 2 boincer umatlas      4096 Apr  4 02:56 shared
[2025-04-04 15:12:46] -rw-r--r-- 2 boincer umatlas    508887 Apr  4 02:56 input.tar.gz
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas         0 Apr  4 02:56 boinc_lockfile
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas      2599 Apr  4 02:56 pandaJob.out
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas       424 Apr  4 02:56 setup.sh.local
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas    979970 Apr  4 02:56 agis_schedconf.cvmfs.json
[2025-04-04 15:12:46] drwx------ 4 boincer umatlas      4096 Apr  4 02:57 pilot3
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas      6300 Apr  4 15:03 init_data.xml
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas 324505304 Apr  4 15:06 HITS.43634898._020003.pool.root.1
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas       533 Apr  4 15:06 boinc_task_state.xml
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas      1060 Apr  4 15:10 memory_monitor_summary.json
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas   1603525 Apr  4 15:11 agis_ddmendpoints.agis.ALL.json
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas    662659 Apr  4 15:11 log.43634898._020003.job.log.tgz.1
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas        29 Apr  4 15:12 wrapper_checkpoint.txt
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas      8192 Apr  4 15:12 boinc_mmap_file
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas      7755 Apr  4 15:12 heartbeat.json
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas        95 Apr  4 15:12 pilot_heartbeat.json
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas      4870 Apr  4 15:12 pilotlog.txt
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas   3377922 Apr  4 15:12 log.43634898._020003.job.log.1
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas       357 Apr  4 15:12 output.list
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas       620 Apr  4 15:12 runtime_log
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas   4055040 Apr  4 15:12 result.tar.gz
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas     11024 Apr  4 15:12 runtime_log.err
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas       666 Apr  4 15:12 MRbLDme6lK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmtVILDmz72t5m.diag
[2025-04-04 15:12:46] -rw-r--r-- 1 boincer umatlas     21051 Apr  4 15:12 stderr.txt
[2025-04-04 15:12:46] HITS file was successfully produced:
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas 324505304 Apr  4 15:06 shared/HITS.pool.root.1
[2025-04-04 15:12:46]  *** Contents of shared directory: ***
[2025-04-04 15:12:46] total 673972
[2025-04-04 15:12:46] -rw-r--r-- 2 boincer umatlas 361045663 Apr  4 02:56 ATLAS.root_0
[2025-04-04 15:12:46] -rw-r--r-- 2 boincer umatlas     17569 Apr  4 02:56 start_atlas.sh
[2025-04-04 15:12:46] -rw-r--r-- 2 boincer umatlas    508887 Apr  4 02:56 input.tar.gz
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas 324505304 Apr  4 15:06 HITS.pool.root.1
[2025-04-04 15:12:46] -rw------- 1 boincer umatlas   4055040 Apr  4 15:12 result.tar.gz
15:12:47 (34296): run_atlas exited; CPU time 99287.750422
15:12:47 (34296): called boinc_finish(0)

</stderr_txt>
]]>

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