Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:05:59 (276332): wrapper (7.7.26015): starting
03:05:59 (276332): wrapper: running run_atlas (--nthreads 12)
[2025-04-04 03:05:59] Arguments: --nthreads 12
[2025-04-04 03:05:59] Threads: 12
[2025-04-04 03:05:59] Checking for CVMFS
[2025-04-04 03:05:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 03:05:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 03:05:59] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 03:06:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 03:06:00] 2.12.6.0 2445012 24360 296876 144480 0 494 29999067 32935937 17477 130560 0 15158530 99.870 4246873 26351 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 03:06:00] CVMFS is ok
[2025-04-04 03:06:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 03:06:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 03:06:00] Further information can be found at the LHC@home message board.
[2025-04-04 03:06:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 03:06:00] Checking for apptainer binary...
[2025-04-04 03:06:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 03:06:00] Running /usr/bin/apptainer --version
[2025-04-04 03:06:00] apptainer version 1.4.0-1.el9
[2025-04-04 03:06:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 03:06:00] c6-12-27-1.aglt2.org
[2025-04-04 03:06:00] apptainer works
[2025-04-04 03:06:00] Set ATHENA_PROC_NUMBER=12
[2025-04-04 03:06:00] Set ATHENA_CORE_NUMBER=12
[2025-04-04 03:06:00] Starting ATLAS job with PandaID=6586697522
[2025-04-04 03:06:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 12:30:14]  *** The last 200 lines of the pilot log: ***
[2025-04-04 12:30:14] 2025-04-04 16:29:53,795 | INFO     | mean x: 1743767250.5316455
[2025-04-04 12:30:14] 2025-04-04 16:29:53,795 | INFO     | mean y: 2387480.3056057864
[2025-04-04 12:30:14] 2025-04-04 16:29:53,795 | INFO     | -- intersect: -11304949019.483109
[2025-04-04 12:30:14] 2025-04-04 16:29:53,796 | INFO     | intersect: -11304949019.483109
[2025-04-04 12:30:14] 2025-04-04 16:29:53,796 | INFO     | chi2: 7.592438513933234
[2025-04-04 12:30:14] 2025-04-04 16:29:53,797 | INFO     | sum of square deviations: 51028861006.47271
[2025-04-04 12:30:14] 2025-04-04 16:29:53,824 | INFO     | sum of deviations: 406915546774.1483
[2025-04-04 12:30:14] 2025-04-04 16:29:53,824 | INFO     | mean x: 1743767098.0310218
[2025-04-04 12:30:14] 2025-04-04 16:29:53,824 | INFO     | mean y: 2394676.932481752
[2025-04-04 12:30:14] 2025-04-04 16:29:53,825 | INFO     | -- intersect: -13902794036.804611
[2025-04-04 12:30:14] 2025-04-04 16:29:53,825 | INFO     | intersect: -13902794036.804611
[2025-04-04 12:30:14] 2025-04-04 16:29:53,825 | INFO     | chi2: 6.2061924134003235
[2025-04-04 12:30:14] 2025-04-04 16:29:53,825 | INFO     | current chi2=6.2061924134003235 (change=18.258245990256576 %)
[2025-04-04 12:30:14] 2025-04-04 16:29:53,826 | INFO     | right removable region: 547
[2025-04-04 12:30:14] 2025-04-04 16:29:53,826 | INFO     | sum of square deviations: 51028782499.27012
[2025-04-04 12:30:14] 2025-04-04 16:29:53,855 | INFO     | sum of deviations: 195078346939.86856
[2025-04-04 12:30:14] 2025-04-04 16:29:53,855 | INFO     | mean x: 1743767403.0364964
[2025-04-04 12:30:14] 2025-04-04 16:29:53,855 | INFO     | mean y: 2403150.056569343
[2025-04-04 12:30:14] 2025-04-04 16:29:53,855 | INFO     | -- intersect: -6663859413.367374
[2025-04-04 12:30:14] 2025-04-04 16:29:53,855 | INFO     | intersect: -6663859413.367374
[2025-04-04 12:30:14] 2025-04-04 16:29:53,856 | INFO     | chi2: 4.785047866669398
[2025-04-04 12:30:14] 2025-04-04 16:29:53,856 | INFO     | current chi2=4.785047866669398 (change=36.97613938014597 %)
[2025-04-04 12:30:14] 2025-04-04 16:29:53,857 | INFO     | sum of square deviations: 49644611062.81772
[2025-04-04 12:30:14] 2025-04-04 16:29:53,877 | INFO     | sum of deviations: 78552385117.60226
[2025-04-04 12:30:14] 2025-04-04 16:29:53,877 | INFO     | mean x: 1743767555.5414364
[2025-04-04 12:30:14] 2025-04-04 16:29:53,877 | INFO     | mean y: 2415993.817679558
[2025-04-04 12:30:14] 2025-04-04 16:29:53,878 | INFO     | -- intersect: -2756737470.092977
[2025-04-04 12:30:14] 2025-04-04 16:29:53,878 | INFO     | intersect: -2756737470.092977
[2025-04-04 12:30:14] 2025-04-04 16:29:53,878 | INFO     | chi2: 3.0610515018885023
[2025-04-04 12:30:14] 2025-04-04 16:29:53,889 | INFO     | current chi2=3.0610515018885023 (change=36.02882171335252 %)
[2025-04-04 12:30:14] 2025-04-04 16:29:53,889 | INFO     | sum of square deviations: 48285695913.838295
[2025-04-04 12:30:14] 2025-04-04 16:29:53,906 | INFO     | sum of deviations: -24159841431.403347
[2025-04-04 12:30:14] 2025-04-04 16:29:53,906 | INFO     | mean x: 1743767708.0464685
[2025-04-04 12:30:14] 2025-04-04 16:29:53,906 | INFO     | mean y: 2427506.656133829
[2025-04-04 12:30:14] 2025-04-04 16:29:53,906 | INFO     | -- intersect: 874925055.3044996
[2025-04-04 12:30:14] 2025-04-04 16:29:53,906 | INFO     | intersect: 874925055.3044996
[2025-04-04 12:30:14] 2025-04-04 16:29:53,917 | INFO     | chi2: 1.663283578570899
[2025-04-04 12:30:14] 2025-04-04 16:29:53,918 | INFO     | current chi2=1.663283578570899 (change=45.66299921629076 %)
[2025-04-04 12:30:14] 2025-04-04 16:29:53,918 | INFO     | sum of square deviations: 46951804489.831406
[2025-04-04 12:30:14] 2025-04-04 16:29:53,950 | INFO     | sum of deviations: -49585479507.91557
[2025-04-04 12:30:14] 2025-04-04 16:29:53,950 | INFO     | mean x: 1743767860.5515947
[2025-04-04 12:30:14] 2025-04-04 16:29:53,950 | INFO     | mean y: 2430400.724202627
[2025-04-04 12:30:14] 2025-04-04 16:29:53,950 | INFO     | -- intersect: 1844011708.5239737
[2025-04-04 12:30:14] 2025-04-04 16:29:53,950 | INFO     | intersect: 1844011708.5239737
[2025-04-04 12:30:14] 2025-04-04 16:29:53,951 | INFO     | chi2: 1.516947623795848
[2025-04-04 12:30:14] 2025-04-04 16:29:53,951 | INFO     | current chi2=1.516947623795848 (change=8.798015964348284 %)
[2025-04-04 12:30:14] 2025-04-04 16:29:53,951 | INFO     | left removable region: 40
[2025-04-04 12:30:14] 2025-04-04 16:29:53,952 | INFO     | sum of square deviations: 40410233046.9155
[2025-04-04 12:30:14] 2025-04-04 16:29:53,963 | INFO     | sum of deviations: 16165056188.402374
[2025-04-04 12:30:14] 2025-04-04 16:29:53,963 | INFO     | mean x: 1743768287.5601578
[2025-04-04 12:30:14] 2025-04-04 16:29:53,964 | INFO     | mean y: 2438622.9704142013
[2025-04-04 12:30:14] 2025-04-04 16:29:53,964 | INFO     | -- intersect: -695110245.7836534
[2025-04-04 12:30:14] 2025-04-04 16:29:53,964 | INFO     | intersect: -695110245.7836534
[2025-04-04 12:30:14] 2025-04-04 16:29:53,964 | INFO     | chi2: 0.0802631799729852
[2025-04-04 12:30:14] 2025-04-04 16:29:53,965 | INFO     | -- intersect: -695110245.7836534
[2025-04-04 12:30:14] 2025-04-04 16:29:53,965 | INFO     | current memory leak: 0.40 B/s (using 507 data points, chi2=0.08)
[2025-04-04 12:30:14] 2025-04-04 16:29:53,972 | INFO     | ..............................
[2025-04-04 12:30:14] 2025-04-04 16:29:53,972 | INFO     | . Timing measurements:
[2025-04-04 12:30:14] 2025-04-04 16:29:53,972 | INFO     | . get job = 0 s
[2025-04-04 12:30:14] 2025-04-04 16:29:53,972 | INFO     | . initial setup = 4 s
[2025-04-04 12:30:14] 2025-04-04 16:29:53,972 | INFO     | . payload setup = 11 s
[2025-04-04 12:30:14] 2025-04-04 16:29:53,972 | INFO     | . stage-in = 0 s
[2025-04-04 12:30:14] 2025-04-04 16:29:53,972 | INFO     | . payload execution = 33730 s
[2025-04-04 12:30:14] 2025-04-04 16:29:53,972 | INFO     | . stage-out = 7 s
[2025-04-04 12:30:14] 2025-04-04 16:29:53,972 | INFO     | . log creation = 0 s
[2025-04-04 12:30:14] 2025-04-04 16:29:53,973 | INFO     | ..............................
[2025-04-04 12:30:14] 2025-04-04 16:29:54,068 | INFO     | 
[2025-04-04 12:30:14] 2025-04-04 16:29:54,068 | INFO     | job summary report
[2025-04-04 12:30:14] 2025-04-04 16:29:54,068 | INFO     | --------------------------------------------------
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | PanDA job id: 6586697522
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | task id: 43634898
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | errors: (none)
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | pilot state: finished 
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | transexitcode: 0
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | exeerrorcode: 0
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | exeerrordiag: 
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | exitcode: 0
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | exitmsg: OK
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | cpuconsumptiontime: 80344 s
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | nevents: 400
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | neventsw: 0
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | pid: 309306
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | pgrp: 309306
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | corecount: 12
[2025-04-04 12:30:14] 2025-04-04 16:29:54,069 | INFO     | event service: False
[2025-04-04 12:30:14] 2025-04-04 16:29:54,070 | INFO     | sizes: {0: 2417173, 1: 2417428, 2: 2417428, 8: 2417662, 12: 2417690, 33747: 2456589, 33748: 2456716, 33756: 2465713, 33759: 2465769, 33798: 2465939}
[2025-04-04 12:30:14] 2025-04-04 16:29:54,070 | INFO     | --------------------------------------------------
[2025-04-04 12:30:14] 2025-04-04 16:29:54,070 | INFO     | 
[2025-04-04 12:30:14] 2025-04-04 16:29:54,070 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-04-04 12:30:14] 2025-04-04 16:29:54,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,209 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,209 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,209 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,211 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 12:30:14] 2025-04-04 16:29:54,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 12:30:14] 2025-04-04 16:29:54,211 | INFO     | job 6586697522 has completed (purged errors)
[2025-04-04 12:30:14] 2025-04-04 16:29:54,211 | INFO     | overall cleanup function is called
[2025-04-04 12:30:14] 2025-04-04 16:29:55,239 | INFO     | --- collectZombieJob: --- 10, [309306]
[2025-04-04 12:30:14] 2025-04-04 16:29:55,240 | INFO     | zombie collector waiting for pid 309306
[2025-04-04 12:30:14] 2025-04-04 16:29:55,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 12:30:14] 2025-04-04 16:29:55,240 | INFO     | collected zombie processes
[2025-04-04 12:30:14] 2025-04-04 16:29:55,240 | INFO     | will attempt to kill all subprocesses of pid=309306
[2025-04-04 12:30:14] 2025-04-04 16:29:57,411 | INFO     | process IDs to be killed: [309306] (in reverse order)
[2025-04-04 12:30:14] 2025-04-04 16:29:57,787 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 12:30:14] 2025-04-04 16:29:57,787 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 12:30:14] 2025-04-04 16:29:57,915 | INFO     | did not find any defunct processes belonging to 309306
[2025-04-04 12:30:14] 2025-04-04 16:29:58,027 | INFO     | did not find any defunct processes belonging to 309306
[2025-04-04 12:30:14] 2025-04-04 16:29:58,027 | INFO     | ready for new job
[2025-04-04 12:30:14] 2025-04-04 16:29:58,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 12:30:14] 2025-04-04 16:29:58,060 | INFO     | **************************************
[2025-04-04 12:30:14] 2025-04-04 16:29:58,061 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 12:30:14] 2025-04-04 16:29:58,061 | INFO     | **************************************
[2025-04-04 12:30:14] 2025-04-04 16:29:58,061 | INFO     | 
[2025-04-04 12:30:14] 2025-04-04 16:29:58,099 | INFO     | architecture information:
[2025-04-04 12:30:14] 2025-04-04 16:29:58,112 | INFO     | executing command: cat /etc/os-release
[2025-04-04 12:30:14] 2025-04-04 16:29:58,260 | INFO     | cat /etc/os-release:
[2025-04-04 12:30:14] NAME="CentOS Linux"
[2025-04-04 12:30:14] VERSION="7 (Core)"
[2025-04-04 12:30:14] ID="centos"
[2025-04-04 12:30:14] ID_LIKE="rhel fedora"
[2025-04-04 12:30:14] VERSION_ID="7"
[2025-04-04 12:30:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 12:30:14] ANSI_COLOR="0;31"
[2025-04-04 12:30:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 12:30:14] HOME_URL="https://www.centos.org/"
[2025-04-04 12:30:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 12:30:14] 
[2025-04-04 12:30:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 12:30:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 12:30:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 12:30:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 12:30:14] 
[2025-04-04 12:30:14] 2025-04-04 16:29:58,260 | INFO     | **************************************
[2025-04-04 12:30:14] 2025-04-04 16:29:58,764 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-04-04 12:30:14] 2025-04-04 16:29:58,867 | INFO     | sufficient remaining disk space (92508520448 B)
[2025-04-04 12:30:14] 2025-04-04 16:29:58,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 12:30:14] 2025-04-04 16:29:58,867 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 12:30:14] 2025-04-04 16:29:58,868 | INFO     | update_server=False
[2025-04-04 12:30:14] 2025-04-04 16:29:58,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 12:30:14] 2025-04-04 16:29:59,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 12:30:14] 2025-04-04 16:29:59,503 | INFO     | all job control threads have been joined
[2025-04-04 12:30:14] 2025-04-04 16:29:59,510 | INFO     | all payload control threads have been joined
[2025-04-04 12:30:14] 2025-04-04 16:29:59,609 | INFO     | all data control threads have been joined
[2025-04-04 12:30:14] 2025-04-04 16:29:59,650 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 12:30:14] 2025-04-04 16:29:59,650 | INFO     | aborting loop
[2025-04-04 12:30:14] 2025-04-04 16:29:59,735 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 12:30:14] 2025-04-04 16:29:59,878 | INFO     | [job] retrieve thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:00,122 | INFO     | [job] queue monitor thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:00,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:00,504 | INFO     | [payload] failed_post thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:00,531 | INFO     | [job] control thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:00,531 | INFO     | [payload] control thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:00,627 | INFO     | [data] control thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:00,730 | INFO     | [job] job monitor thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:00,826 | INFO     | [data] copytool_in thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:00,838 | INFO     | [job] validate thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:00,838 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:00,949 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:01,334 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:01,477 | INFO     | [payload] validate_post thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:01,742 | INFO     | [data] copytool_out thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:01,815 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 12:30:14] 2025-04-04 16:30:04,036 | INFO     | PID=287740 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-04 12:30:14] 2025-04-04 16:30:04,036 | INFO     | .. there are 30 such processes running
[2025-04-04 12:30:14] 2025-04-04 16:30:04,053 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 12:30:14] 2025-04-04 16:30:04,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 12:30:14] 2025-04-04 16:30:04,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 12:30:14] 2025-04-04 16:30:05,903 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 12:30:14] 2025-04-04 16:30:07,023 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140604932851520)>', '<ExcThread(monitor, started 140604445013760)>']
[2025-04-04 12:30:14] 2025-04-04 16:30:07,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 12:30:14] 2025-04-04 16:30:07,071 | INFO     | [monitor] control thread has ended
[2025-04-04 12:30:14] 2025-04-04 16:30:12,049 | INFO     | all workflow threads have been joined
[2025-04-04 12:30:14] 2025-04-04 16:30:12,050 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 12:30:14] 2025-04-04 16:30:12,050 | INFO     | traces error code: 0
[2025-04-04 12:30:14] 2025-04-04 16:30:12,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 12:30:14] 2025-04-04 16:30:12,781 [wrapper] ==== pilot stdout END ====
[2025-04-04 12:30:14] 2025-04-04 16:30:12,817 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 12:30:14] 2025-04-04 16:30:12,834 [wrapper] pilotpid: 287740
[2025-04-04 12:30:14] 2025-04-04 16:30:12,873 [wrapper] Pilot exit status: 0
[2025-04-04 12:30:14] 2025-04-04 16:30:12,976 [wrapper] pandaids: 6586697522
[2025-04-04 12:30:14] 2025-04-04 16:30:13,663 [wrapper] cleanup supervisor_pilot 3772302 287742
[2025-04-04 12:30:14] 2025-04-04 16:30:13,702 [wrapper] Test setup, not cleaning
[2025-04-04 12:30:14] 2025-04-04 16:30:13,725 [wrapper] apfmon messages muted
[2025-04-04 12:30:14] 2025-04-04 16:30:13,753 [wrapper] ==== wrapper stdout END ====
[2025-04-04 12:30:14] 2025-04-04 16:30:13,774 [wrapper] ==== wrapper stderr END ====
[2025-04-04 12:30:14]  *** Error codes and diagnostics ***
[2025-04-04 12:30:14]     "exeErrorCode": 0,
[2025-04-04 12:30:14]     "exeErrorDiag": "",
[2025-04-04 12:30:14]     "pilotErrorCode": 0,
[2025-04-04 12:30:14]     "pilotErrorDiag": "",
[2025-04-04 12:30:14]  *** Listing of results directory ***
[2025-04-04 12:30:14] total 683276
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 22:12 pilot3.tar.gz
[2025-04-04 12:30:14] -rwx------. 1 boincer umatlas     37140 Apr  3 22:24 runpilot2-wrapper.sh
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 22:24 queuedata.json
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas       100 Apr  4 03:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 12:30:14] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 03:05 run_atlas
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas       105 Apr  4 03:05 job.xml
[2025-04-04 12:30:14] -rw-r--r--. 2 boincer umatlas 361826143 Apr  4 03:05 EVNT.43634896._000760.pool.root.1
[2025-04-04 12:30:14] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 03:05 start_atlas.sh
[2025-04-04 12:30:14] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 03:05 shared
[2025-04-04 12:30:14] -rw-r--r--. 2 boincer umatlas    508890 Apr  4 03:05 input.tar.gz
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas         0 Apr  4 03:05 boinc_lockfile
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas      2600 Apr  4 03:06 pandaJob.out
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas       467 Apr  4 03:06 setup.sh.local
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas    979970 Apr  4 03:06 agis_schedconf.cvmfs.json
[2025-04-04 12:30:14] drwx------. 4 boincer umatlas      4096 Apr  4 03:06 pilot3
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas 327820552 Apr  4 12:26 HITS.43634898._019917.pool.root.1
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas       532 Apr  4 12:26 boinc_task_state.xml
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas      1057 Apr  4 12:28 memory_monitor_summary.json
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas   1603525 Apr  4 12:29 agis_ddmendpoints.agis.ALL.json
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas    606924 Apr  4 12:29 log.43634898._019917.job.log.tgz.1
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas      6859 Apr  4 12:29 init_data.xml
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas      7750 Apr  4 12:29 heartbeat.json
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas        95 Apr  4 12:30 pilot_heartbeat.json
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas      4747 Apr  4 12:30 pilotlog.txt
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas        28 Apr  4 12:30 wrapper_checkpoint.txt
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 12:30 boinc_mmap_file
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas   2485891 Apr  4 12:30 log.43634898._019917.job.log.1
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas       357 Apr  4 12:30 output.list
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas       620 Apr  4 12:30 runtime_log
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas   3112960 Apr  4 12:30 result.tar.gz
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas     11431 Apr  4 12:30 runtime_log.err
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas       664 Apr  4 12:30 5YHODmIulK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmpUILDmcibvBn.diag
[2025-04-04 12:30:14] -rw-r--r--. 1 boincer umatlas     20946 Apr  4 12:30 stderr.txt
[2025-04-04 12:30:14] HITS file was successfully produced:
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas 327820552 Apr  4 12:26 shared/HITS.pool.root.1
[2025-04-04 12:30:14]  *** Contents of shared directory: ***
[2025-04-04 12:30:14] total 677056
[2025-04-04 12:30:14] -rw-r--r--. 2 boincer umatlas 361826143 Apr  4 03:05 ATLAS.root_0
[2025-04-04 12:30:14] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 03:05 start_atlas.sh
[2025-04-04 12:30:14] -rw-r--r--. 2 boincer umatlas    508890 Apr  4 03:05 input.tar.gz
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas 327820552 Apr  4 12:26 HITS.pool.root.1
[2025-04-04 12:30:14] -rw-------. 1 boincer umatlas   3112960 Apr  4 12:30 result.tar.gz
12:30:16 (276332): run_atlas exited; CPU time 81896.079348
12:30:16 (276332): called boinc_finish(0)

</stderr_txt>
]]>

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