Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:02:12 (806794): wrapper (7.7.26015): starting
04:02:12 (806794): wrapper: running run_atlas (--nthreads 9)
[2025-04-04 04:02:12] Arguments: --nthreads 9
[2025-04-04 04:02:12] Threads: 9
[2025-04-04 04:02:12] Checking for CVMFS
[2025-04-04 04:02:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 04:02:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 04:02:13] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 04:02:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 04:02:14] 2.12.6.0 2555540 190949 327516 144481 2 302 21709524 40960001 16298 130560 0 23153306 99.779 13511233 30259 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 04:02:14] CVMFS is ok
[2025-04-04 04:02:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 04:02:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 04:02:15] Further information can be found at the LHC@home message board.
[2025-04-04 04:02:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 04:02:15] Checking for apptainer binary...
[2025-04-04 04:02:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 04:02:15] Running /usr/bin/apptainer --version
[2025-04-04 04:02:15] apptainer version 1.4.0-1.el9
[2025-04-04 04:02:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 04:02:15] c6-8-12-3.aglt2.org
[2025-04-04 04:02:15] apptainer works
[2025-04-04 04:02:15] Set ATHENA_PROC_NUMBER=9
[2025-04-04 04:02:15] Set ATHENA_CORE_NUMBER=9
[2025-04-04 04:02:16] Starting ATLAS job with PandaID=6586697461
[2025-04-04 04:02:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 15:26:53]  *** The last 200 lines of the pilot log: ***
[2025-04-04 15:26:53] 2025-04-04 19:26:35,572 | INFO     | executing command: lscpu
[2025-04-04 15:26:53] 2025-04-04 19:26:35,638 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-04 15:26:53] 2025-04-04 19:26:36,074 | INFO     | monitor loop #2414: job 0:6586697461 is in state 'finished'
[2025-04-04 15:26:53] 2025-04-04 19:26:36,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 15:26:53] 2025-04-04 19:26:38,582 | INFO     | monitor loop #2415: job 0:6586697461 is in state 'finished'
[2025-04-04 15:26:53] 2025-04-04 19:26:38,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 15:26:53] 2025-04-04 19:26:40,663 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-04 15:26:53] 2025-04-04 19:26:40,664 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6586697461/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 15:26:53] 2025-04-04 19:26:40,664 | INFO     | extracted standard info from prmon json
[2025-04-04 15:26:53] 2025-04-04 19:26:40,665 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 15:26:53] 2025-04-04 19:26:40,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 15:26:53] 2025-04-04 19:26:40,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 15:26:53] 2025-04-04 19:26:40,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 15:26:53] 2025-04-04 19:26:40,676 | INFO     | fitting pss+swap vs Time
[2025-04-04 15:26:53] 2025-04-04 19:26:40,677 | INFO     | sum of square deviations: 93265630948.60352
[2025-04-04 15:26:53] 2025-04-04 19:26:40,685 | INFO     | sum of deviations: 1060450417242.0728
[2025-04-04 15:26:53] 2025-04-04 19:26:40,686 | INFO     | mean x: 1743774326.2298508
[2025-04-04 15:26:53] 2025-04-04 19:26:40,686 | INFO     | mean y: 2346100.1164179104
[2025-04-04 15:26:53] 2025-04-04 19:26:40,686 | INFO     | -- intersect: -19824745541.449837
[2025-04-04 15:26:53] 2025-04-04 19:26:40,686 | INFO     | intersect: -19824745541.449837
[2025-04-04 15:26:53] 2025-04-04 19:26:40,687 | INFO     | chi2: 11.05113834380721
[2025-04-04 15:26:53] 2025-04-04 19:26:40,688 | INFO     | sum of square deviations: 91193337695.88869
[2025-04-04 15:26:53] 2025-04-04 19:26:40,696 | INFO     | sum of deviations: 1154671741597.4355
[2025-04-04 15:26:53] 2025-04-04 19:26:40,696 | INFO     | mean x: 1743774173.7338345
[2025-04-04 15:26:53] 2025-04-04 19:26:40,696 | INFO     | mean y: 2353009.6917293235
[2025-04-04 15:26:53] 2025-04-04 19:26:40,696 | INFO     | -- intersect: -22076965644.621002
[2025-04-04 15:26:53] 2025-04-04 19:26:40,696 | INFO     | intersect: -22076965644.621002
[2025-04-04 15:26:53] 2025-04-04 19:26:40,697 | INFO     | chi2: 9.40687328891333
[2025-04-04 15:26:53] 2025-04-04 19:26:40,697 | INFO     | current chi2=9.40687328891333 (change=14.878693974682585 %)
[2025-04-04 15:26:53] 2025-04-04 19:26:40,697 | INFO     | right removable region: 664
[2025-04-04 15:26:53] 2025-04-04 19:26:40,698 | INFO     | sum of square deviations: 91193080153.41945
[2025-04-04 15:26:53] 2025-04-04 19:26:40,706 | INFO     | sum of deviations: 881843080607.2035
[2025-04-04 15:26:53] 2025-04-04 19:26:40,707 | INFO     | mean x: 1743774478.7353384
[2025-04-04 15:26:53] 2025-04-04 19:26:40,707 | INFO     | mean y: 2359234.097744361
[2025-04-04 15:26:53] 2025-04-04 19:26:40,707 | INFO     | -- intersect: -16860054620.387367
[2025-04-04 15:26:53] 2025-04-04 19:26:40,707 | INFO     | intersect: -16860054620.387367
[2025-04-04 15:26:53] 2025-04-04 19:26:40,708 | INFO     | chi2: 8.177059363513843
[2025-04-04 15:26:53] 2025-04-04 19:26:40,708 | INFO     | current chi2=8.177059363513843 (change=26.007085341610363 %)
[2025-04-04 15:26:53] 2025-04-04 19:26:40,709 | INFO     | sum of square deviations: 89151460170.69554
[2025-04-04 15:26:53] 2025-04-04 19:26:40,717 | INFO     | sum of deviations: 750575202021.2953
[2025-04-04 15:26:53] 2025-04-04 19:26:40,717 | INFO     | mean x: 1743774631.240909
[2025-04-04 15:26:53] 2025-04-04 19:26:40,717 | INFO     | mean y: 2369038.1742424243
[2025-04-04 15:26:53] 2025-04-04 19:26:40,717 | INFO     | -- intersect: -14678646770.39772
[2025-04-04 15:26:53] 2025-04-04 19:26:40,717 | INFO     | intersect: -14678646770.39772
[2025-04-04 15:26:53] 2025-04-04 19:26:40,718 | INFO     | chi2: 6.779892474398069
[2025-04-04 15:26:53] 2025-04-04 19:26:40,718 | INFO     | current chi2=6.779892474398069 (change=17.086422233278054 %)
[2025-04-04 15:26:53] 2025-04-04 19:26:40,718 | INFO     | left removable region: 20
[2025-04-04 15:26:53] 2025-04-04 19:26:40,719 | INFO     | sum of square deviations: 82823899603.2485
[2025-04-04 15:26:53] 2025-04-04 19:26:40,727 | INFO     | sum of deviations: 583293095830.0928
[2025-04-04 15:26:53] 2025-04-04 19:26:40,727 | INFO     | mean x: 1743774753.2515528
[2025-04-04 15:26:53] 2025-04-04 19:26:40,727 | INFO     | mean y: 2396722.4068322983
[2025-04-04 15:26:53] 2025-04-04 19:26:40,727 | INFO     | -- intersect: -12278258730.02686
[2025-04-04 15:26:53] 2025-04-04 19:26:40,727 | INFO     | intersect: -12278258730.02686
[2025-04-04 15:26:53] 2025-04-04 19:26:40,728 | INFO     | chi2: 2.235419202981984
[2025-04-04 15:26:53] 2025-04-04 19:26:40,728 | INFO     | -- intersect: -12278258730.02686
[2025-04-04 15:26:53] 2025-04-04 19:26:40,728 | INFO     | current memory leak: 7.04 B/s (using 644 data points, chi2=2.24)
[2025-04-04 15:26:53] 2025-04-04 19:26:40,729 | INFO     | ..............................
[2025-04-04 15:26:53] 2025-04-04 19:26:40,729 | INFO     | . Timing measurements:
[2025-04-04 15:26:53] 2025-04-04 19:26:40,729 | INFO     | . get job = 0 s
[2025-04-04 15:26:53] 2025-04-04 19:26:40,729 | INFO     | . initial setup = 4 s
[2025-04-04 15:26:53] 2025-04-04 19:26:40,730 | INFO     | . payload setup = 34 s
[2025-04-04 15:26:53] 2025-04-04 19:26:40,730 | INFO     | . stage-in = 0 s
[2025-04-04 15:26:53] 2025-04-04 19:26:40,730 | INFO     | . payload execution = 40893 s
[2025-04-04 15:26:53] 2025-04-04 19:26:40,730 | INFO     | . stage-out = 3 s
[2025-04-04 15:26:53] 2025-04-04 19:26:40,730 | INFO     | . log creation = 0 s
[2025-04-04 15:26:53] 2025-04-04 19:26:40,730 | INFO     | ..............................
[2025-04-04 15:26:53] 2025-04-04 19:26:40,827 | INFO     | 
[2025-04-04 15:26:53] 2025-04-04 19:26:40,827 | INFO     | job summary report
[2025-04-04 15:26:53] 2025-04-04 19:26:40,827 | INFO     | --------------------------------------------------
[2025-04-04 15:26:53] 2025-04-04 19:26:40,827 | INFO     | PanDA job id: 6586697461
[2025-04-04 15:26:53] 2025-04-04 19:26:40,827 | INFO     | task id: 43634898
[2025-04-04 15:26:53] 2025-04-04 19:26:40,827 | INFO     | errors: (none)
[2025-04-04 15:26:53] 2025-04-04 19:26:40,827 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 15:26:53] 2025-04-04 19:26:40,827 | INFO     | pilot state: finished 
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | transexitcode: 0
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | exeerrorcode: 0
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | exeerrordiag: 
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | exitcode: 0
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | exitmsg: OK
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | cpuconsumptiontime: 76383 s
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | nevents: 400
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | neventsw: 0
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | pid: 822985
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | pgrp: 822985
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | corecount: 9
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | event service: False
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | sizes: {0: 2416565, 1: 2417421, 2: 2417449, 13: 2417449, 23: 2417505, 32: 2417739, 34: 2417895, 40931: 2459767, 40935: 2468708, 40936: 2468764, 40944: 2468934}
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | --------------------------------------------------
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | 
[2025-04-04 15:26:53] 2025-04-04 19:26:40,828 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-04 15:26:53] 2025-04-04 19:26:40,845 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,846 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,846 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,846 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,847 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,847 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,847 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,847 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,847 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,847 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,847 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 15:26:53] 2025-04-04 19:26:40,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,847 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 15:26:53] 2025-04-04 19:26:40,847 | INFO     | job 6586697461 has completed (purged errors)
[2025-04-04 15:26:53] 2025-04-04 19:26:40,847 | INFO     | overall cleanup function is called
[2025-04-04 15:26:53] 2025-04-04 19:26:41,314 | INFO     | 41010s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-04 15:26:53] 2025-04-04 19:26:41,856 | INFO     | --- collectZombieJob: --- 10, [822985]
[2025-04-04 15:26:53] 2025-04-04 19:26:41,856 | INFO     | zombie collector waiting for pid 822985
[2025-04-04 15:26:53] 2025-04-04 19:26:41,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 15:26:53] 2025-04-04 19:26:41,856 | INFO     | collected zombie processes
[2025-04-04 15:26:53] 2025-04-04 19:26:41,856 | INFO     | will attempt to kill all subprocesses of pid=822985
[2025-04-04 15:26:53] 2025-04-04 19:26:42,150 | INFO     | process IDs to be killed: [822985] (in reverse order)
[2025-04-04 15:26:53] 2025-04-04 19:26:42,251 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 15:26:53] 2025-04-04 19:26:42,252 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 15:26:53] 2025-04-04 19:26:42,265 | INFO     | did not find any defunct processes belonging to 822985
[2025-04-04 15:26:53] 2025-04-04 19:26:42,280 | INFO     | did not find any defunct processes belonging to 822985
[2025-04-04 15:26:53] 2025-04-04 19:26:42,280 | INFO     | ready for new job
[2025-04-04 15:26:53] 2025-04-04 19:26:42,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 15:26:53] 2025-04-04 19:26:42,283 | INFO     | **************************************
[2025-04-04 15:26:53] 2025-04-04 19:26:42,283 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 15:26:53] 2025-04-04 19:26:42,283 | INFO     | **************************************
[2025-04-04 15:26:53] 2025-04-04 19:26:42,283 | INFO     | 
[2025-04-04 15:26:53] 2025-04-04 19:26:42,298 | INFO     | architecture information:
[2025-04-04 15:26:53] 2025-04-04 19:26:42,299 | INFO     | executing command: cat /etc/os-release
[2025-04-04 15:26:53] 2025-04-04 19:26:42,319 | INFO     | cat /etc/os-release:
[2025-04-04 15:26:53] NAME="CentOS Linux"
[2025-04-04 15:26:53] VERSION="7 (Core)"
[2025-04-04 15:26:53] ID="centos"
[2025-04-04 15:26:53] ID_LIKE="rhel fedora"
[2025-04-04 15:26:53] VERSION_ID="7"
[2025-04-04 15:26:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 15:26:53] ANSI_COLOR="0;31"
[2025-04-04 15:26:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 15:26:53] HOME_URL="https://www.centos.org/"
[2025-04-04 15:26:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 15:26:53] 
[2025-04-04 15:26:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 15:26:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 15:26:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 15:26:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 15:26:53] 
[2025-04-04 15:26:53] 2025-04-04 19:26:42,320 | INFO     | **************************************
[2025-04-04 15:26:53] 2025-04-04 19:26:42,823 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-04 15:26:53] 2025-04-04 19:26:42,850 | INFO     | sufficient remaining disk space (54231302144 B)
[2025-04-04 15:26:53] 2025-04-04 19:26:42,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 15:26:53] 2025-04-04 19:26:42,850 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 15:26:53] 2025-04-04 19:26:42,850 | INFO     | update_server=False
[2025-04-04 15:26:53] 2025-04-04 19:26:42,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 15:26:53] 2025-04-04 19:26:42,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 15:26:53] 2025-04-04 19:26:42,851 | INFO     | aborting loop
[2025-04-04 15:26:53] 2025-04-04 19:26:42,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 15:26:53] 2025-04-04 19:26:42,852 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 15:26:53] 2025-04-04 19:26:42,852 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 15:26:53] 2025-04-04 19:26:42,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 15:26:53] 2025-04-04 19:26:42,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 15:26:53] 2025-04-04 19:26:43,067 | INFO     | all payload control threads have been joined
[2025-04-04 15:26:53] 2025-04-04 19:26:43,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 15:26:53] 2025-04-04 19:26:43,368 | INFO     | all job control threads have been joined
[2025-04-04 15:26:53] 2025-04-04 19:26:43,827 | INFO     | all data control threads have been joined
[2025-04-04 15:26:53] 2025-04-04 19:26:43,855 | INFO     | [job] retrieve thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:43,860 | INFO     | [job] job monitor thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:44,074 | INFO     | [payload] control thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:44,373 | INFO     | [job] control thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:44,406 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:44,485 | INFO     | [data] copytool_in thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:44,520 | INFO     | [payload] failed_post thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:44,635 | INFO     | [job] validate thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:44,833 | INFO     | [data] control thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:44,857 | INFO     | [data] copytool_out thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:44,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:44,883 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:45,313 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:45,443 | INFO     | [payload] validate_post thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:45,843 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 15:26:53] 2025-04-04 19:26:46,849 | INFO     | [job] queue monitor thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:47,132 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 15:26:53] 2025-04-04 19:26:47,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140399369156416)>', '<ExcThread(monitor, started 140398412408576)>']
[2025-04-04 15:26:53] 2025-04-04 19:26:47,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 15:26:53] 2025-04-04 19:26:47,883 | INFO     | [monitor] control thread has ended
[2025-04-04 15:26:53] 2025-04-04 19:26:52,442 | INFO     | all workflow threads have been joined
[2025-04-04 15:26:53] 2025-04-04 19:26:52,442 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 15:26:53] 2025-04-04 19:26:52,443 | INFO     | traces error code: 0
[2025-04-04 15:26:53] 2025-04-04 19:26:52,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 15:26:53] 2025-04-04 19:26:52,620 [wrapper] ==== pilot stdout END ====
[2025-04-04 15:26:53] 2025-04-04 19:26:52,624 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 15:26:53] 2025-04-04 19:26:52,628 [wrapper] pilotpid: 814428
[2025-04-04 15:26:53] 2025-04-04 19:26:52,631 [wrapper] Pilot exit status: 0
[2025-04-04 15:26:53] 2025-04-04 19:26:52,648 [wrapper] pandaids: 6586697461
[2025-04-04 15:26:53] 2025-04-04 19:26:52,731 [wrapper] cleanup supervisor_pilot 3305148 814429
[2025-04-04 15:26:53] 2025-04-04 19:26:52,734 [wrapper] Test setup, not cleaning
[2025-04-04 15:26:53] 2025-04-04 19:26:52,739 [wrapper] apfmon messages muted
[2025-04-04 15:26:53] 2025-04-04 19:26:52,742 [wrapper] ==== wrapper stdout END ====
[2025-04-04 15:26:53] 2025-04-04 19:26:52,744 [wrapper] ==== wrapper stderr END ====
[2025-04-04 15:26:53]  *** Error codes and diagnostics ***
[2025-04-04 15:26:53]     "exeErrorCode": 0,
[2025-04-04 15:26:53]     "exeErrorDiag": "",
[2025-04-04 15:26:53]     "pilotErrorCode": 0,
[2025-04-04 15:26:53]     "pilotErrorDiag": "",
[2025-04-04 15:26:53]  *** Listing of results directory ***
[2025-04-04 15:26:53] total 677900
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 22:12 pilot3.tar.gz
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 22:16 queuedata.json
[2025-04-04 15:26:53] -rwx------. 1 boincer umatlas     37140 Apr  3 22:16 runpilot2-wrapper.sh
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas       100 Apr  4 04:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 15:26:53] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 04:02 run_atlas
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas       105 Apr  4 04:02 job.xml
[2025-04-04 15:26:53] -rw-r--r--. 2 boincer umatlas 360737005 Apr  4 04:02 EVNT.43634896._000758.pool.root.1
[2025-04-04 15:26:53] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 04:02 start_atlas.sh
[2025-04-04 15:26:53] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 04:02 shared
[2025-04-04 15:26:53] -rw-r--r--. 2 boincer umatlas    508889 Apr  4 04:02 input.tar.gz
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas         0 Apr  4 04:02 boinc_lockfile
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas      2596 Apr  4 04:02 pandaJob.out
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas       467 Apr  4 04:02 setup.sh.local
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas    979978 Apr  4 04:03 agis_schedconf.cvmfs.json
[2025-04-04 15:26:53] drwx------. 4 boincer umatlas      4096 Apr  4 04:03 pilot3
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas      6841 Apr  4 15:22 init_data.xml
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas 321973154 Apr  4 15:24 HITS.43634898._019856.pool.root.1
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas       532 Apr  4 15:24 boinc_task_state.xml
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas      1053 Apr  4 15:26 memory_monitor_summary.json
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas   1603525 Apr  4 15:26 agis_ddmendpoints.agis.ALL.json
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas    615875 Apr  4 15:26 log.43634898._019856.job.log.tgz.1
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas        95 Apr  4 15:26 pilot_heartbeat.json
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas      7739 Apr  4 15:26 heartbeat.json
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 15:26 boinc_mmap_file
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas        28 Apr  4 15:26 wrapper_checkpoint.txt
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas      4476 Apr  4 15:26 pilotlog.txt
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas   3194253 Apr  4 15:26 log.43634898._019856.job.log.1
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas       357 Apr  4 15:26 output.list
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas       620 Apr  4 15:26 runtime_log
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas   3829760 Apr  4 15:26 result.tar.gz
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas     11424 Apr  4 15:26 runtime_log.err
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas       664 Apr  4 15:26 f84NDmVmlK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1TILDmn1wRWo.diag
[2025-04-04 15:26:53] -rw-r--r--. 1 boincer umatlas     21274 Apr  4 15:26 stderr.txt
[2025-04-04 15:26:53] HITS file was successfully produced:
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas 321973154 Apr  4 15:24 shared/HITS.pool.root.1
[2025-04-04 15:26:53]  *** Contents of shared directory: ***
[2025-04-04 15:26:53] total 670980
[2025-04-04 15:26:53] -rw-r--r--. 2 boincer umatlas 360737005 Apr  4 04:02 ATLAS.root_0
[2025-04-04 15:26:53] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 04:02 start_atlas.sh
[2025-04-04 15:26:53] -rw-r--r--. 2 boincer umatlas    508889 Apr  4 04:02 input.tar.gz
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas 321973154 Apr  4 15:24 HITS.pool.root.1
[2025-04-04 15:26:53] -rw-------. 1 boincer umatlas   3829760 Apr  4 15:26 result.tar.gz
15:26:54 (806794): run_atlas exited; CPU time 77555.532121
15:26:54 (806794): called boinc_finish(0)

</stderr_txt>
]]>

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