Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:34:37 (3867681): wrapper (7.7.26015): starting
02:34:37 (3867681): wrapper: running run_atlas (--nthreads 12)
[2025-04-06 02:34:37] Arguments: --nthreads 12
[2025-04-06 02:34:37] Threads: 12
[2025-04-06 02:34:37] Checking for CVMFS
[2025-04-06 02:34:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-06 02:34:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-06 02:34:38] Running cvmfs_config stat atlas.cern.ch
[2025-04-06 02:34:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-06 02:34:38] 2.12.7.0 3477254 1196 63392 144548 3 56 2390078 4096001 0 130560 0 1054754 99.991 287516 1797 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-06 02:34:38] CVMFS is ok
[2025-04-06 02:34:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-06 02:34:38] Checking for apptainer binary...
[2025-04-06 02:34:38] apptainer is not installed, using version from CVMFS
[2025-04-06 02:34:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-06 02:34:38] ryzen7
[2025-04-06 02:34:38] apptainer works
[2025-04-06 02:34:38] Set ATHENA_PROC_NUMBER=12
[2025-04-06 02:34:38] Set ATHENA_CORE_NUMBER=12
[2025-04-06 02:34:38] Starting ATLAS job with PandaID=6586322149
[2025-04-06 02:34:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-06 03:54:11]  *** The last 200 lines of the pilot log: ***
[2025-04-06 03:54:11]  lfn=log.43634898._017073.job.log.tgz.1
[2025-04-06 03:54:11]  mtime=0
[2025-04-06 03:54:11]  protocol_id=None
[2025-04-06 03:54:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-06 03:54:11]  replicas=None
[2025-04-06 03:54:11]  scope=mc23_13p6TeV
[2025-04-06 03:54:11]  status=None
[2025-04-06 03:54:11]  status_code=0
[2025-04-06 03:54:11]  storage_token=
[2025-04-06 03:54:11]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586322149/log.43634898._017073.job.log.tgz.1
[2025-04-06 03:54:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/f7/log.43634898._017073.job.log.tgz.1
[2025-04-06 03:54:11]  workdir=None
[2025-04-06 03:54:11] ]
[2025-04-06 03:54:11] 2025-04-06 03:53:43,837 | INFO     | transferring file log.43634898._017073.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586322149/log.43634898._017073.job.log.tgz.1 t
[2025-04-06 03:54:11] 2025-04-06 03:53:43,837 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586322149/log.43634898._017073.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-06 03:54:11] 2025-04-06 03:53:43,846 | INFO     | adding to output.list: log.43634898._017073.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/f7/log.43634898._017073.job.log.tg
[2025-04-06 03:54:11] 2025-04-06 03:53:43,846 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-06 03:54:11] 2025-04-06 03:53:43,847 | INFO     | summary of transferred files:
[2025-04-06 03:54:11] 2025-04-06 03:53:43,847 | INFO     |  -- lfn=log.43634898._017073.job.log.tgz.1, status_code=0, status=transferred
[2025-04-06 03:54:11] 2025-04-06 03:53:43,847 | INFO     | stage-out finished correctly
[2025-04-06 03:54:11] 2025-04-06 03:53:44,434 | INFO     | monitor loop #355: job 0:6586322149 is in state 'finished'
[2025-04-06 03:54:11] 2025-04-06 03:53:44,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 03:54:11] 2025-04-06 03:53:45,646 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-06 03:54:11] 2025-04-06 03:53:46,937 | INFO     | monitor loop #356: job 0:6586322149 is in state 'finished'
[2025-04-06 03:54:11] 2025-04-06 03:53:46,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 03:54:11] 2025-04-06 03:53:47,674 | INFO     | job 6586322149 has state=finished
[2025-04-06 03:54:11] 2025-04-06 03:53:47,674 | INFO     | preparing for final server update for job 6586322149 in state='finished'
[2025-04-06 03:54:11] 2025-04-06 03:53:47,674 | INFO     | this job has now completed (state=finished)
[2025-04-06 03:54:11] 2025-04-06 03:53:47,674 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-06 03:54:11] 2025-04-06 03:53:47,674 | INFO     | log transfer has been attempted: DONE
[2025-04-06 03:54:11] 2025-04-06 03:53:47,674 | INFO     | job 6586322149 has finished - writing final server update
[2025-04-06 03:54:11] 2025-04-06 03:53:47,675 | INFO     | total number of processed events: 400 (read)
[2025-04-06 03:54:11] 2025-04-06 03:53:47,695 | INFO     | executing command: lscpu
[2025-04-06 03:54:11] 2025-04-06 03:53:47,711 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-06 03:54:11] 2025-04-06 03:53:49,438 | INFO     | monitor loop #357: job 0:6586322149 is in state 'finished'
[2025-04-06 03:54:11] 2025-04-06 03:53:49,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 03:54:11] 2025-04-06 03:53:51,941 | INFO     | monitor loop #358: job 0:6586322149 is in state 'finished'
[2025-04-06 03:54:11] 2025-04-06 03:53:51,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 03:54:11] 2025-04-06 03:53:54,444 | INFO     | monitor loop #359: job 0:6586322149 is in state 'finished'
[2025-04-06 03:54:11] 2025-04-06 03:53:54,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 03:54:11] 2025-04-06 03:53:56,719 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-06 03:54:11] 2025-04-06 03:53:56,719 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586322149/memory_monitor_summary.json (trf name=prmon)
[2025-04-06 03:54:11] 2025-04-06 03:53:56,719 | INFO     | extracted standard info from prmon json
[2025-04-06 03:54:11] 2025-04-06 03:53:56,720 | INFO     | extracted standard memory fields from prmon json
[2025-04-06 03:54:11] 2025-04-06 03:53:56,720 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-06 03:54:11] 2025-04-06 03:53:56,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-06 03:54:11] 2025-04-06 03:53:56,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-06 03:54:11] 2025-04-06 03:53:56,721 | INFO     | fitting pss+swap vs Time
[2025-04-06 03:54:11] 2025-04-06 03:53:56,721 | INFO     | sum of square deviations: 110960220.0
[2025-04-06 03:54:11] 2025-04-06 03:53:56,721 | INFO     | sum of deviations: 6840090552.000013
[2025-04-06 03:54:11] 2025-04-06 03:53:56,721 | INFO     | mean x: 1743909356.0
[2025-04-06 03:54:11] 2025-04-06 03:53:56,721 | INFO     | mean y: 2840616.704225352
[2025-04-06 03:54:11] 2025-04-06 03:53:56,721 | INFO     | -- intersect: -107499631075.58359
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | intersect: -107499631075.58359
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | chi2: 1.7632912283764164
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | -- intersect: -107499631075.58359
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | current memory leak: 61.64 B/s (using 71 data points, chi2=1.76)
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | ..............................
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | . Timing measurements:
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | . get job = 0 s
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | . initial setup = 1 s
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | . payload setup = 5 s
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | . stage-in = 0 s
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | . payload execution = 4710 s
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | . stage-out = 0 s
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | . log creation = 0 s
[2025-04-06 03:54:11] 2025-04-06 03:53:56,722 | INFO     | ..............................
[2025-04-06 03:54:11] 2025-04-06 03:53:56,796 | INFO     | 
[2025-04-06 03:54:11] 2025-04-06 03:53:56,796 | INFO     | job summary report
[2025-04-06 03:54:11] 2025-04-06 03:53:56,796 | INFO     | --------------------------------------------------
[2025-04-06 03:54:11] 2025-04-06 03:53:56,796 | INFO     | PanDA job id: 6586322149
[2025-04-06 03:54:11] 2025-04-06 03:53:56,796 | INFO     | task id: 43634898
[2025-04-06 03:54:11] 2025-04-06 03:53:56,796 | INFO     | errors: (none)
[2025-04-06 03:54:11] 2025-04-06 03:53:56,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | pilot state: finished 
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | transexitcode: 0
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | exeerrorcode: 0
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | exeerrordiag: 
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | exitcode: 0
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | exitmsg: OK
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | cpuconsumptiontime: 42796 s
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | nevents: 400
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | neventsw: 0
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | pid: 3877945
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | pgrp: 3877945
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | corecount: 12
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | event service: False
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | sizes: {0: 2417422, 4: 2417628, 11: 2417656, 4719: 2443681, 4721: 2452668, 4722: 2452724, 4733: 2453022}
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | --------------------------------------------------
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | 
[2025-04-06 03:54:11] 2025-04-06 03:53:56,797 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-06 03:54:11] 2025-04-06 03:53:56,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-06 03:54:11] 2025-04-06 03:53:56,810 | INFO     | job 6586322149 has completed (purged errors)
[2025-04-06 03:54:11] 2025-04-06 03:53:56,810 | INFO     | overall cleanup function is called
[2025-04-06 03:54:11] 2025-04-06 03:53:57,814 | INFO     | --- collectZombieJob: --- 10, [3877945]
[2025-04-06 03:54:11] 2025-04-06 03:53:57,814 | INFO     | zombie collector waiting for pid 3877945
[2025-04-06 03:54:11] 2025-04-06 03:53:57,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-06 03:54:11] 2025-04-06 03:53:57,814 | INFO     | collected zombie processes
[2025-04-06 03:54:11] 2025-04-06 03:53:57,814 | INFO     | will attempt to kill all subprocesses of pid=3877945
[2025-04-06 03:54:11] 2025-04-06 03:53:57,902 | INFO     | process IDs to be killed: [3877945] (in reverse order)
[2025-04-06 03:54:11] 2025-04-06 03:53:57,934 | WARNING  | found no corresponding commands to process id(s)
[2025-04-06 03:54:11] 2025-04-06 03:53:57,934 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-06 03:54:11] 2025-04-06 03:53:57,936 | INFO     | did not find any defunct processes belonging to 3877945
[2025-04-06 03:54:11] 2025-04-06 03:53:57,937 | INFO     | did not find any defunct processes belonging to 3877945
[2025-04-06 03:54:11] 2025-04-06 03:53:57,937 | INFO     | ready for new job
[2025-04-06 03:54:11] 2025-04-06 03:53:57,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-06 03:54:11] 2025-04-06 03:53:57,938 | INFO     | **************************************
[2025-04-06 03:54:11] 2025-04-06 03:53:57,938 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-06 03:54:11] 2025-04-06 03:53:57,938 | INFO     | **************************************
[2025-04-06 03:54:11] 2025-04-06 03:53:57,938 | INFO     | 
[2025-04-06 03:54:11] 2025-04-06 03:53:57,959 | INFO     | architecture information:
[2025-04-06 03:54:11] 2025-04-06 03:53:57,959 | INFO     | executing command: cat /etc/os-release
[2025-04-06 03:54:11] 2025-04-06 03:53:57,965 | INFO     | cat /etc/os-release:
[2025-04-06 03:54:11] NAME="CentOS Linux"
[2025-04-06 03:54:11] VERSION="7 (Core)"
[2025-04-06 03:54:11] ID="centos"
[2025-04-06 03:54:11] ID_LIKE="rhel fedora"
[2025-04-06 03:54:11] VERSION_ID="7"
[2025-04-06 03:54:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-06 03:54:11] ANSI_COLOR="0;31"
[2025-04-06 03:54:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-06 03:54:11] HOME_URL="https://www.centos.org/"
[2025-04-06 03:54:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-06 03:54:11] 
[2025-04-06 03:54:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-06 03:54:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-06 03:54:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-06 03:54:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-06 03:54:11] 
[2025-04-06 03:54:11] 2025-04-06 03:53:57,966 | INFO     | **************************************
[2025-04-06 03:54:11] 2025-04-06 03:53:58,466 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 03:54:11] 2025-04-06 03:53:58,473 | INFO     | sufficient remaining disk space (175452979200 B)
[2025-04-06 03:54:11] 2025-04-06 03:53:58,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-06 03:54:11] 2025-04-06 03:53:58,474 | INFO     | current server update state: UPDATING_FINAL
[2025-04-06 03:54:11] 2025-04-06 03:53:58,474 | INFO     | update_server=False
[2025-04-06 03:54:11] 2025-04-06 03:53:58,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-06 03:54:11] 2025-04-06 03:53:58,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-06 03:54:11] 2025-04-06 03:53:58,474 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-06 03:54:11] 2025-04-06 03:53:58,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-06 03:54:11] 2025-04-06 03:53:58,474 | INFO     | found 0 job(s) in 20 queues
[2025-04-06 03:54:11] 2025-04-06 03:53:58,474 | INFO     | aborting loop
[2025-04-06 03:54:11] 2025-04-06 03:53:58,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-06 03:54:11] 2025-04-06 03:53:58,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-06 03:54:11] 2025-04-06 03:53:58,898 | INFO     | all job control threads have been joined
[2025-04-06 03:54:11] 2025-04-06 03:53:58,914 | INFO     | all data control threads have been joined
[2025-04-06 03:54:11] 2025-04-06 03:53:59,410 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-06 03:54:11] 2025-04-06 03:53:59,478 | INFO     | [job] retrieve thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:53:59,478 | INFO     | [job] job monitor thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:53:59,478 | INFO     | [job] queue monitor thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:53:59,518 | INFO     | [job] create_data_payload thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:53:59,522 | INFO     | [payload] validate_post thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:53:59,550 | INFO     | [data] copytool_in thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:53:59,798 | INFO     | all payload control threads have been joined
[2025-04-06 03:54:11] 2025-04-06 03:53:59,902 | INFO     | [job] control thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:53:59,918 | INFO     | [data] control thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:53:59,962 | INFO     | [payload] execute_payloads thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:54:00,526 | INFO     | [payload] validate_pre thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:54:00,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:54:00,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-06 03:54:11] 2025-04-06 03:54:00,802 | INFO     | [payload] control thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:54:00,806 | INFO     | [payload] failed_post thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:54:00,926 | INFO     | [job] validate thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:54:01,414 | INFO     | [data] copytool_out thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:54:04,714 | INFO     | [data] queue_monitor thread has finished
[2025-04-06 03:54:11] 2025-04-06 03:54:06,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706390751040)>', '<ExcThread(monitor, started 140705661966080)>']
[2025-04-06 03:54:11] 2025-04-06 03:54:06,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-06 03:54:11] 2025-04-06 03:54:06,506 | INFO     | [monitor] control thread has ended
[2025-04-06 03:54:11] 2025-04-06 03:54:11,318 | INFO     | all workflow threads have been joined
[2025-04-06 03:54:11] 2025-04-06 03:54:11,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-06 03:54:11] 2025-04-06 03:54:11,318 | INFO     | traces error code: 0
[2025-04-06 03:54:11] 2025-04-06 03:54:11,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-06 03:54:11] 2025-04-06 03:54:11,371 [wrapper] ==== pilot stdout END ====
[2025-04-06 03:54:11] 2025-04-06 03:54:11,375 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-06 03:54:11] 2025-04-06 03:54:11,376 [wrapper] pilotpid: 3871403
[2025-04-06 03:54:11] 2025-04-06 03:54:11,378 [wrapper] Pilot exit status: 0
[2025-04-06 03:54:11] 2025-04-06 03:54:11,391 [wrapper] pandaids: 6586322149
[2025-04-06 03:54:11] 2025-04-06 03:54:11,408 [wrapper] cleanup supervisor_pilot 3889680 3871404
[2025-04-06 03:54:11] 2025-04-06 03:54:11,409 [wrapper] Test setup, not cleaning
[2025-04-06 03:54:11] 2025-04-06 03:54:11,411 [wrapper] apfmon messages muted
[2025-04-06 03:54:11] 2025-04-06 03:54:11,415 [wrapper] ==== wrapper stdout END ====
[2025-04-06 03:54:11] 2025-04-06 03:54:11,417 [wrapper] ==== wrapper stderr END ====
[2025-04-06 03:54:11]  *** Error codes and diagnostics ***
[2025-04-06 03:54:11]     "exeErrorCode": 0,
[2025-04-06 03:54:11]     "exeErrorDiag": "",
[2025-04-06 03:54:11]     "pilotErrorCode": 0,
[2025-04-06 03:54:11]     "pilotErrorDiag": "",
[2025-04-06 03:54:11]  *** Listing of results directory ***
[2025-04-06 03:54:11] total 669704
[2025-04-06 03:54:11] -rw-r--r-- 1 boinc boinc    495897 Apr  3 19:25 pilot3.tar.gz
[2025-04-06 03:54:11] -rw-r--r-- 1 boinc boinc      5111 Apr  3 19:38 queuedata.json
[2025-04-06 03:54:11] -rwx------ 1 boinc boinc     37140 Apr  3 19:38 runpilot2-wrapper.sh
[2025-04-06 03:54:11] -rw-rw-r-- 1 boinc boinc       100 Apr  6 02:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-06 03:54:11] -rwxr-xr-x 1 boinc boinc      7986 Apr  6 02:34 run_atlas
[2025-04-06 03:54:11] -rw-rw-r-- 1 boinc boinc       105 Apr  6 02:34 job.xml
[2025-04-06 03:54:11] -rw-r--r-- 2 boinc boinc     17569 Apr  6 02:34 start_atlas.sh
[2025-04-06 03:54:11] drwxrwx--x 2 boinc boinc      4096 Apr  6 02:34 shared
[2025-04-06 03:54:11] -rw-r--r-- 2 boinc boinc    508890 Apr  6 02:34 input.tar.gz
[2025-04-06 03:54:11] -rw-rw-r-- 1 boinc boinc      9677 Apr  6 02:34 init_data.xml
[2025-04-06 03:54:11] -rw-r--r-- 2 boinc boinc 360127746 Apr  6 02:34 EVNT.43634896._000628.pool.root.1
[2025-04-06 03:54:11] -rw-rw-r-- 1 boinc boinc         0 Apr  6 02:34 boinc_lockfile
[2025-04-06 03:54:11] -rw-rw-r-- 1 boinc boinc      2599 Apr  6 02:34 pandaJob.out
[2025-04-06 03:54:11] -rw------- 1 boinc boinc       424 Apr  6 02:34 setup.sh.local
[2025-04-06 03:54:11] -rw------- 1 boinc boinc    980067 Apr  6 02:34 agis_schedconf.cvmfs.json
[2025-04-06 03:54:11] -rw------- 1 boinc boinc   1603525 Apr  6 02:34 agis_ddmendpoints.agis.ALL.json
[2025-04-06 03:54:11] drwx------ 4 boinc boinc      4096 Apr  6 02:34 pilot3
[2025-04-06 03:54:11] -rw-rw-r-- 1 boinc boinc       531 Apr  6 03:53 boinc_task_state.xml
[2025-04-06 03:54:11] -rw------- 1 boinc boinc 320121498 Apr  6 03:53 HITS.43634898._017073.pool.root.1
[2025-04-06 03:54:11] -rw------- 1 boinc boinc        95 Apr  6 03:53 pilot_heartbeat.json
[2025-04-06 03:54:11] -rw------- 1 boinc boinc      1016 Apr  6 03:53 memory_monitor_summary.json
[2025-04-06 03:54:11] -rw------- 1 boinc boinc    370433 Apr  6 03:53 log.43634898._017073.job.log.tgz.1
[2025-04-06 03:54:11] -rw------- 1 boinc boinc      7653 Apr  6 03:53 heartbeat.json
[2025-04-06 03:54:11] -rw-rw-r-- 1 boinc boinc        27 Apr  6 03:54 wrapper_checkpoint.txt
[2025-04-06 03:54:11] -rw-rw-r-- 1 boinc boinc      8192 Apr  6 03:54 boinc_mmap_file
[2025-04-06 03:54:11] -rw------- 1 boinc boinc      4500 Apr  6 03:54 pilotlog.txt
[2025-04-06 03:54:11] -rw------- 1 boinc boinc    471470 Apr  6 03:54 log.43634898._017073.job.log.1
[2025-04-06 03:54:11] -rw------- 1 boinc boinc       357 Apr  6 03:54 output.list
[2025-04-06 03:54:11] -rw-rw-r-- 1 boinc boinc       620 Apr  6 03:54 runtime_log
[2025-04-06 03:54:11] -rw------- 1 boinc boinc    860160 Apr  6 03:54 result.tar.gz
[2025-04-06 03:54:11] -rw-rw-r-- 1 boinc boinc     11399 Apr  6 03:54 runtime_log.err
[2025-04-06 03:54:11] -rw------- 1 boinc boinc       648 Apr  6 03:54 4XGKDm1ZfK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmFGtKDmFMJtTn.diag
[2025-04-06 03:54:11] -rw-rw-r-- 1 boinc boinc     21444 Apr  6 03:54 stderr.txt
[2025-04-06 03:54:11] HITS file was successfully produced:
[2025-04-06 03:54:11] -rw------- 1 boinc boinc 320121498 Apr  6 03:53 shared/HITS.pool.root.1
[2025-04-06 03:54:11]  *** Contents of shared directory: ***
[2025-04-06 03:54:11] total 665676
[2025-04-06 03:54:11] -rw-r--r-- 2 boinc boinc     17569 Apr  6 02:34 start_atlas.sh
[2025-04-06 03:54:11] -rw-r--r-- 2 boinc boinc    508890 Apr  6 02:34 input.tar.gz
[2025-04-06 03:54:11] -rw-r--r-- 2 boinc boinc 360127746 Apr  6 02:34 ATLAS.root_0
[2025-04-06 03:54:11] -rw------- 1 boinc boinc 320121498 Apr  6 03:53 HITS.pool.root.1
[2025-04-06 03:54:11] -rw------- 1 boinc boinc    860160 Apr  6 03:54 result.tar.gz
03:54:12 (3867681): run_atlas exited; CPU time 42825.663085
03:54:12 (3867681): called boinc_finish(0)

</stderr_txt>
]]>

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