Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:35:35 (2084): wrapper (7.7.26015): starting
02:35:35 (2084): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 02:35:36] Arguments: --nthreads 8
[2025-04-04 02:35:36] Threads: 8
[2025-04-04 02:35:36] Checking for CVMFS
[2025-04-04 02:35:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 02:35:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 02:35:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 02:35:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 02:35:37] 2.11.2.0 46184 2610 190644 144480 3 449 10197811 18432000 20227 130560 0 25322914 98.542 71051317 54584 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-04 02:35:37] CVMFS is ok
[2025-04-04 02:35:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 02:35:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 02:35:37] Further information can be found at the LHC@home message board.
[2025-04-04 02:35:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 02:35:37] Checking for apptainer binary...
[2025-04-04 02:35:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 02:35:37] Running /usr/bin/apptainer --version
[2025-04-04 02:35:37] apptainer version 1.3.2-1.el7
[2025-04-04 02:35:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 02:35:45] c-212-9.aglt2.org
[2025-04-04 02:35:45] apptainer works
[2025-04-04 02:35:45] Set ATHENA_PROC_NUMBER=8
[2025-04-04 02:35:45] Set ATHENA_CORE_NUMBER=8
[2025-04-04 02:35:45] Starting ATLAS job with PandaID=6584909956
[2025-04-04 02:35:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 05:39:11]  *** The last 200 lines of the pilot log: ***
[2025-04-04 05:39:11] 2025-04-04 09:38:54,008 | INFO     | chi2: 6.7137819545649275
[2025-04-04 05:39:11] 2025-04-04 09:38:54,008 | INFO     | model: linear, x: [1743748774.0, 1743748835.0, 1743748896.0, 1743748957.0, 1743749018.0, 1743749079.0, 1743749140.0, 1743749201.0, 1743749262.0, 1743749323.0, 1743
[2025-04-04 05:39:11] 2025-04-04 09:38:54,009 | INFO     | sum of square deviations: 1550407976.2923932
[2025-04-04 05:39:11] 2025-04-04 09:38:54,009 | INFO     | sum of deviations: 95136225039.53809
[2025-04-04 05:39:11] 2025-04-04 09:38:54,009 | INFO     | mean x: 1743753959.0643275
[2025-04-04 05:39:11] 2025-04-04 09:38:54,010 | INFO     | mean y: 2364529.678362573
[2025-04-04 05:39:11] 2025-04-04 09:38:54,010 | INFO     | -- intersect: -106997968027.84918
[2025-04-04 05:39:11] 2025-04-04 09:38:54,010 | INFO     | intersect: -106997968027.84918
[2025-04-04 05:39:11] 2025-04-04 09:38:54,010 | INFO     | chi2: 5.919056132743326
[2025-04-04 05:39:11] 2025-04-04 09:38:54,010 | INFO     | current chi2=5.919056132743326 (change=11.837230151349203 %)
[2025-04-04 05:39:11] 2025-04-04 09:38:54,010 | INFO     | right removable region: 170
[2025-04-04 05:39:11] 2025-04-04 09:38:54,010 | INFO     | model: linear, x: [1743749079.0, 1743749140.0, 1743749201.0, 1743749262.0, 1743749323.0, 1743749384.0, 1743749445.0, 1743749506.0, 1743749567.0, 1743749628.0, 1743
[2025-04-04 05:39:11] 2025-04-04 09:38:54,014 | INFO     | sum of square deviations: 1550401266.2923932
[2025-04-04 05:39:11] 2025-04-04 09:38:54,015 | INFO     | sum of deviations: 38545479977.59649
[2025-04-04 05:39:11] 2025-04-04 09:38:54,015 | INFO     | mean x: 1743754264.0643275
[2025-04-04 05:39:11] 2025-04-04 09:38:54,015 | INFO     | mean y: 2406609.49122807
[2025-04-04 05:39:11] 2025-04-04 09:38:54,015 | INFO     | -- intersect: -43350141232.574356
[2025-04-04 05:39:11] 2025-04-04 09:38:54,015 | INFO     | intersect: -43350141232.574356
[2025-04-04 05:39:11] 2025-04-04 09:38:54,015 | INFO     | chi2: 3.4357464961730235
[2025-04-04 05:39:11] 2025-04-04 09:38:54,015 | INFO     | current chi2=3.4357464961730235 (change=48.82546797879036 %)
[2025-04-04 05:39:11] 2025-04-04 09:38:54,016 | INFO     | model: linear, x: [1743749384.0, 1743749445.0, 1743749506.0, 1743749567.0, 1743749628.0, 1743749689.0, 1743749750.0, 1743749811.0, 1743749872.0, 1743749933.0, 1743
[2025-04-04 05:39:11] 2025-04-04 09:38:54,016 | INFO     | sum of square deviations: 1418330318.7710838
[2025-04-04 05:39:11] 2025-04-04 09:38:54,017 | INFO     | sum of deviations: 6612739765.1084385
[2025-04-04 05:39:11] 2025-04-04 09:38:54,017 | INFO     | mean x: 1743754416.566265
[2025-04-04 05:39:11] 2025-04-04 09:38:54,017 | INFO     | mean y: 2443461.626506024
[2025-04-04 05:39:11] 2025-04-04 09:38:54,017 | INFO     | -- intersect: -8127534455.648976
[2025-04-04 05:39:11] 2025-04-04 09:38:54,017 | INFO     | intersect: -8127534455.648976
[2025-04-04 05:39:11] 2025-04-04 09:38:54,017 | INFO     | chi2: 2.055459666556067
[2025-04-04 05:39:11] 2025-04-04 09:38:54,017 | INFO     | current chi2=2.055459666556067 (change=40.174291996060155 %)
[2025-04-04 05:39:11] 2025-04-04 09:38:54,018 | INFO     | model: linear, x: [1743749689.0, 1743749750.0, 1743749811.0, 1743749872.0, 1743749933.0, 1743749995.0, 1743750055.0, 1743750116.0, 1743750177.0, 1743750238.0, 1743
[2025-04-04 05:39:11] 2025-04-04 09:38:54,018 | INFO     | sum of square deviations: 1293980446.2484443
[2025-04-04 05:39:11] 2025-04-04 09:38:54,019 | INFO     | sum of deviations: -19819220229.186333
[2025-04-04 05:39:11] 2025-04-04 09:38:54,019 | INFO     | mean x: 1743754569.068323
[2025-04-04 05:39:11] 2025-04-04 09:38:54,019 | INFO     | mean y: 2475778.198757764
[2025-04-04 05:39:11] 2025-04-04 09:38:54,019 | INFO     | -- intersect: 26710650488.42116
[2025-04-04 05:39:11] 2025-04-04 09:38:54,019 | INFO     | intersect: 26710650488.42116
[2025-04-04 05:39:11] 2025-04-04 09:38:54,019 | INFO     | chi2: 1.0242634893043825
[2025-04-04 05:39:11] 2025-04-04 09:38:54,019 | INFO     | current chi2=1.0242634893043825 (change=50.1686408169448 %)
[2025-04-04 05:39:11] 2025-04-04 09:38:54,019 | INFO     | model: linear, x: [1743749995.0, 1743750055.0, 1743750116.0, 1743750177.0, 1743750238.0, 1743750299.0, 1743750360.0, 1743750421.0, 1743750482.0, 1743750543.0, 1743
[2025-04-04 05:39:11] 2025-04-04 09:38:54,020 | INFO     | sum of square deviations: 1177119086.2243636
[2025-04-04 05:39:11] 2025-04-04 09:38:54,020 | INFO     | sum of deviations: -23761265942.384617
[2025-04-04 05:39:11] 2025-04-04 09:38:54,020 | INFO     | mean x: 1743754721.5705128
[2025-04-04 05:39:11] 2025-04-04 09:38:54,020 | INFO     | mean y: 2480831.3076923075
[2025-04-04 05:39:11] 2025-04-04 09:38:54,021 | INFO     | -- intersect: 35201824858.95889
[2025-04-04 05:39:11] 2025-04-04 09:38:54,021 | INFO     | intersect: 35201824858.95889
[2025-04-04 05:39:11] 2025-04-04 09:38:54,021 | INFO     | chi2: 0.9649758905440984
[2025-04-04 05:39:11] 2025-04-04 09:38:54,021 | INFO     | current chi2=0.9649758905440984 (change=5.788315153217913 %)
[2025-04-04 05:39:11] 2025-04-04 09:38:54,021 | INFO     | left removable region: 40
[2025-04-04 05:39:11] 2025-04-04 09:38:54,021 | INFO     | model: linear, x: [1743751215.0, 1743751275.0, 1743751336.0, 1743751397.0, 1743751458.0, 1743751519.0, 1743751580.0, 1743751641.0, 1743751702.0, 1743751764.0, 1743
[2025-04-04 05:39:11] 2025-04-04 09:38:54,021 | INFO     | sum of square deviations: 681183929.8769256
[2025-04-04 05:39:11] 2025-04-04 09:38:54,022 | INFO     | sum of deviations: 2471823179.0461545
[2025-04-04 05:39:11] 2025-04-04 09:38:54,022 | INFO     | mean x: 1743755148.5692308
[2025-04-04 05:39:11] 2025-04-04 09:38:54,022 | INFO     | mean y: 2471147.6615384617
[2025-04-04 05:39:11] 2025-04-04 09:38:54,023 | INFO     | -- intersect: -6325121453.639641
[2025-04-04 05:39:11] 2025-04-04 09:38:54,023 | INFO     | intersect: -6325121453.639641
[2025-04-04 05:39:11] 2025-04-04 09:38:54,023 | INFO     | chi2: 5.437778781147816e-05
[2025-04-04 05:39:11] 2025-04-04 09:38:54,023 | INFO     | -- intersect: -6325121453.639641
[2025-04-04 05:39:11] 2025-04-04 09:38:54,023 | INFO     | current memory leak: 3.63 B/s (using 130 data points, chi2=0.00)
[2025-04-04 05:39:11] 2025-04-04 09:38:54,024 | INFO     | ..............................
[2025-04-04 05:39:11] 2025-04-04 09:38:54,024 | INFO     | . Timing measurements:
[2025-04-04 05:39:11] 2025-04-04 09:38:54,024 | INFO     | . get job = 0 s
[2025-04-04 05:39:11] 2025-04-04 09:38:54,024 | INFO     | . initial setup = 2 s
[2025-04-04 05:39:11] 2025-04-04 09:38:54,024 | INFO     | . payload setup = 42 s
[2025-04-04 05:39:11] 2025-04-04 09:38:54,024 | INFO     | . stage-in = 0 s
[2025-04-04 05:39:11] 2025-04-04 09:38:54,024 | INFO     | . payload execution = 10766 s
[2025-04-04 05:39:11] 2025-04-04 09:38:54,024 | INFO     | . stage-out = 4 s
[2025-04-04 05:39:11] 2025-04-04 09:38:54,041 | INFO     | . log creation = 0 s
[2025-04-04 05:39:11] 2025-04-04 09:38:54,042 | INFO     | ..............................
[2025-04-04 05:39:11] 2025-04-04 09:38:54,206 | INFO     | 
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | job summary report
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | --------------------------------------------------
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | PanDA job id: 6584909956
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | task id: 44004367
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | errors: (none)
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | pilot state: finished 
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | transexitcode: 0
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | exeerrorcode: 0
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | exeerrordiag: 
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | exitcode: 0
[2025-04-04 05:39:11] 2025-04-04 09:38:54,207 | INFO     | exitmsg: OK
[2025-04-04 05:39:11] 2025-04-04 09:38:54,208 | INFO     | cpuconsumptiontime: 34543 s
[2025-04-04 05:39:11] 2025-04-04 09:38:54,208 | INFO     | nevents: 400
[2025-04-04 05:39:11] 2025-04-04 09:38:54,208 | INFO     | neventsw: 0
[2025-04-04 05:39:11] 2025-04-04 09:38:54,208 | INFO     | pid: 24167
[2025-04-04 05:39:11] 2025-04-04 09:38:54,208 | INFO     | pgrp: 24167
[2025-04-04 05:39:11] 2025-04-04 09:38:54,208 | INFO     | corecount: 8
[2025-04-04 05:39:11] 2025-04-04 09:38:54,208 | INFO     | event service: False
[2025-04-04 05:39:11] 2025-04-04 09:38:54,208 | INFO     | sizes: {0: 2417152, 1: 2417351, 12: 2417351, 22: 2417379, 30: 2417613, 33: 2417641, 10812: 2446808, 10813: 2446807, 10818: 2455804, 10820: 2455860, 10863: 2456030}
[2025-04-04 05:39:11] 2025-04-04 09:38:54,208 | INFO     | --------------------------------------------------
[2025-04-04 05:39:11] 2025-04-04 09:38:54,208 | INFO     | 
[2025-04-04 05:39:11] 2025-04-04 09:38:54,208 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-04-04 05:39:11] 2025-04-04 09:38:54,404 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,404 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,404 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,404 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 05:39:11] 2025-04-04 09:38:54,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 05:39:11] 2025-04-04 09:38:54,415 | INFO     | job 6584909956 has completed (purged errors)
[2025-04-04 05:39:11] 2025-04-04 09:38:54,415 | INFO     | overall cleanup function is called
[2025-04-04 05:39:11] 2025-04-04 09:38:55,427 | INFO     | --- collectZombieJob: --- 10, [24167]
[2025-04-04 05:39:11] 2025-04-04 09:38:55,427 | INFO     | zombie collector waiting for pid 24167
[2025-04-04 05:39:11] 2025-04-04 09:38:55,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 05:39:11] 2025-04-04 09:38:55,427 | INFO     | collected zombie processes
[2025-04-04 05:39:11] 2025-04-04 09:38:55,427 | INFO     | will attempt to kill all subprocesses of pid=24167
[2025-04-04 05:39:11] 2025-04-04 09:38:56,256 | INFO     | PID=10668 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-04 05:39:11] 2025-04-04 09:38:56,256 | INFO     | .. there are 28 such processes running
[2025-04-04 05:39:11] 2025-04-04 09:38:56,407 | INFO     | process IDs to be killed: [24167] (in reverse order)
[2025-04-04 05:39:11] 2025-04-04 09:38:56,671 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 05:39:11] 2025-04-04 09:38:56,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 05:39:11] 2025-04-04 09:38:56,702 | INFO     | did not find any defunct processes belonging to 24167
[2025-04-04 05:39:11] 2025-04-04 09:38:56,727 | INFO     | did not find any defunct processes belonging to 24167
[2025-04-04 05:39:11] 2025-04-04 09:38:56,728 | INFO     | ready for new job
[2025-04-04 05:39:11] 2025-04-04 09:38:56,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 05:39:11] 2025-04-04 09:38:56,734 | INFO     | ***************************************
[2025-04-04 05:39:11] 2025-04-04 09:38:56,734 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-04 05:39:11] 2025-04-04 09:38:56,735 | INFO     | ***************************************
[2025-04-04 05:39:11] 2025-04-04 09:38:56,735 | INFO     | 
[2025-04-04 05:39:11] 2025-04-04 09:38:56,748 | INFO     | architecture information:
[2025-04-04 05:39:11] 2025-04-04 09:38:56,756 | INFO     | executing command: cat /etc/os-release
[2025-04-04 05:39:11] 2025-04-04 09:38:56,780 | INFO     | cat /etc/os-release:
[2025-04-04 05:39:11] NAME="CentOS Linux"
[2025-04-04 05:39:11] VERSION="7 (Core)"
[2025-04-04 05:39:11] ID="centos"
[2025-04-04 05:39:11] ID_LIKE="rhel fedora"
[2025-04-04 05:39:11] VERSION_ID="7"
[2025-04-04 05:39:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 05:39:11] ANSI_COLOR="0;31"
[2025-04-04 05:39:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 05:39:11] HOME_URL="https://www.centos.org/"
[2025-04-04 05:39:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 05:39:11] 
[2025-04-04 05:39:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 05:39:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 05:39:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 05:39:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 05:39:11] 
[2025-04-04 05:39:11] 2025-04-04 09:38:56,780 | INFO     | ***************************************
[2025-04-04 05:39:11] 2025-04-04 09:38:57,283 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-04-04 05:39:11] 2025-04-04 09:38:57,413 | INFO     | sufficient remaining disk space (102918782976 B)
[2025-04-04 05:39:11] 2025-04-04 09:38:57,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 05:39:11] 2025-04-04 09:38:57,414 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 05:39:11] 2025-04-04 09:38:57,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 05:39:11] 2025-04-04 09:38:57,414 | INFO     | aborting loop
[2025-04-04 05:39:11] 2025-04-04 09:38:57,414 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 05:39:11] 2025-04-04 09:38:57,688 | INFO     | all data control threads have been joined
[2025-04-04 05:39:11] 2025-04-04 09:38:57,740 | INFO     | all payload control threads have been joined
[2025-04-04 05:39:11] 2025-04-04 09:38:58,053 | INFO     | all job control threads have been joined
[2025-04-04 05:39:11] 2025-04-04 09:38:58,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 05:39:11] 2025-04-04 09:38:58,263 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 05:39:11] 2025-04-04 09:38:58,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 05:39:11] 2025-04-04 09:38:58,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 05:39:11] 2025-04-04 09:38:58,420 | INFO     | [job] retrieve thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:58,420 | INFO     | [job] job monitor thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:58,481 | INFO     | [payload] validate_post thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:58,551 | INFO     | [job] validate thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:58,696 | INFO     | [data] control thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:58,747 | INFO     | [payload] control thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:59,060 | INFO     | [job] control thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:59,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 05:39:11] 2025-04-04 09:38:59,232 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:59,232 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:59,381 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:59,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:59,394 | INFO     | [data] copytool_in thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:59,422 | INFO     | [data] copytool_out thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:38:59,540 | INFO     | [payload] failed_post thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:39:00,223 | INFO     | [job] queue monitor thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:39:02,190 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 05:39:11] 2025-04-04 09:39:04,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243285874496)>', '<ExcThread(monitor, started 140242627589888)>']
[2025-04-04 05:39:11] 2025-04-04 09:39:04,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 05:39:11] 2025-04-04 09:39:04,306 | INFO     | [monitor] control thread has ended
[2025-04-04 05:39:11] 2025-04-04 09:39:09,083 | INFO     | all workflow threads have been joined
[2025-04-04 05:39:11] 2025-04-04 09:39:09,084 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 05:39:11] 2025-04-04 09:39:09,084 | INFO     | traces error code: 0
[2025-04-04 05:39:11] 2025-04-04 09:39:09,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 05:39:11] 2025-04-04 09:39:09,389 [wrapper] ==== pilot stdout END ====
[2025-04-04 05:39:11] 2025-04-04 09:39:09,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 05:39:11] 2025-04-04 09:39:09,492 [wrapper] pilotpid: 10668
[2025-04-04 05:39:11] 2025-04-04 09:39:09,531 [wrapper] Pilot exit status: 0
[2025-04-04 05:39:11] 2025-04-04 09:39:09,758 [wrapper] pandaids: 6584909956
[2025-04-04 05:39:11] 2025-04-04 09:39:10,060 [wrapper] cleanup supervisor_pilot 15642 10669
[2025-04-04 05:39:11] 2025-04-04 09:39:10,064 [wrapper] Test setup, not cleaning
[2025-04-04 05:39:11] 2025-04-04 09:39:10,103 [wrapper] apfmon messages muted
[2025-04-04 05:39:11] 2025-04-04 09:39:10,143 [wrapper] ==== wrapper stdout END ====
[2025-04-04 05:39:11] 2025-04-04 09:39:10,186 [wrapper] ==== wrapper stderr END ====
[2025-04-04 05:39:11]  *** Error codes and diagnostics ***
[2025-04-04 05:39:11]     "exeErrorCode": 0,
[2025-04-04 05:39:11]     "exeErrorDiag": "",
[2025-04-04 05:39:11]     "pilotErrorCode": 0,
[2025-04-04 05:39:11]     "pilotErrorDiag": "",
[2025-04-04 05:39:11]  *** Listing of results directory ***
[2025-04-04 05:39:11] total 399328
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas    494584 Apr  2 23:24 pilot3.tar.gz
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas      5112 Apr  2 23:55 queuedata.json
[2025-04-04 05:39:11] -rwx------ 1 boincer umatlas     37140 Apr  2 23:55 runpilot2-wrapper.sh
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas       100 Apr  4 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 05:39:11] -rwxr-xr-x 1 boincer umatlas      7986 Apr  4 02:35 run_atlas
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas       105 Apr  4 02:35 job.xml
[2025-04-04 05:39:11] -rw-r--r-- 2 boincer umatlas     17571 Apr  4 02:35 start_atlas.sh
[2025-04-04 05:39:11] drwxrwx--x 2 boincer umatlas      4096 Apr  4 02:35 shared
[2025-04-04 05:39:11] -rw-r--r-- 2 boincer umatlas    507247 Apr  4 02:35 input.tar.gz
[2025-04-04 05:39:11] -rw-r--r-- 2 boincer umatlas 219459995 Apr  4 02:35 EVNT.44004365._000281.pool.root.1
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas         0 Apr  4 02:35 boinc_lockfile
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas      2549 Apr  4 02:35 pandaJob.out
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas       424 Apr  4 02:35 setup.sh.local
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas    979970 Apr  4 02:36 agis_schedconf.cvmfs.json
[2025-04-04 05:39:11] drwx------ 4 boincer umatlas      4096 Apr  4 02:36 pilot3
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas      6303 Apr  4 05:28 init_data.xml
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas 182775415 Apr  4 05:37 HITS.44004367._007023.pool.root.1
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas       531 Apr  4 05:37 boinc_task_state.xml
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas      1089 Apr  4 05:38 memory_monitor_summary.json
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas   1603525 Apr  4 05:38 agis_ddmendpoints.agis.ALL.json
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas    383877 Apr  4 05:38 log.44004367._007023.job.log.tgz.1
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas        95 Apr  4 05:38 pilot_heartbeat.json
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas      7763 Apr  4 05:38 heartbeat.json
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas      8192 Apr  4 05:39 boinc_mmap_file
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas        28 Apr  4 05:39 wrapper_checkpoint.txt
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas      4220 Apr  4 05:39 pilotlog.txt
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas   1036807 Apr  4 05:39 log.44004367._007023.job.log.1
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas       357 Apr  4 05:39 output.list
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas       620 Apr  4 05:39 runtime_log
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas   1443840 Apr  4 05:39 result.tar.gz
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas     11010 Apr  4 05:39 runtime_log.err
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas       662 Apr  4 05:39 0NIMDmErQK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmfZGLDm6FiAIo.diag
[2025-04-04 05:39:11] -rw-r--r-- 1 boincer umatlas     21749 Apr  4 05:39 stderr.txt
[2025-04-04 05:39:11] HITS file was successfully produced:
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas 182775415 Apr  4 05:37 shared/HITS.pool.root.1
[2025-04-04 05:39:11]  *** Contents of shared directory: ***
[2025-04-04 05:39:11] total 394744
[2025-04-04 05:39:11] -rw-r--r-- 2 boincer umatlas     17571 Apr  4 02:35 start_atlas.sh
[2025-04-04 05:39:11] -rw-r--r-- 2 boincer umatlas    507247 Apr  4 02:35 input.tar.gz
[2025-04-04 05:39:11] -rw-r--r-- 2 boincer umatlas 219459995 Apr  4 02:35 ATLAS.root_0
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas 182775415 Apr  4 05:37 HITS.pool.root.1
[2025-04-04 05:39:11] -rw------- 1 boincer umatlas   1443840 Apr  4 05:39 result.tar.gz
05:39:12 (2084): run_atlas exited; CPU time 33909.253136
05:39:12 (2084): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN