Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:27:49 (2510354): wrapper (7.7.26015): starting
21:27:49 (2510354): wrapper: running run_atlas (--nthreads 12)
[2025-04-04 21:27:49] Arguments: --nthreads 12
[2025-04-04 21:27:49] Threads: 12
[2025-04-04 21:27:49] Checking for CVMFS
[2025-04-04 21:27:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 21:27:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 21:27:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 21:27:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 21:27:52] 2.12.7.0 236409 7609 155632 144501 1 439 27484457 46080000 35532 130560 0 98780792 99.902 29396956 6153 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-04 21:27:52] CVMFS is ok
[2025-04-04 21:27:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 21:27:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 21:27:52] Further information can be found at the LHC@home message board.
[2025-04-04 21:27:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 21:27:52] Checking for apptainer binary...
[2025-04-04 21:27:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 21:27:52] Running /usr/bin/apptainer --version
[2025-04-04 21:27:52] apptainer version 1.3.6-1.el9
[2025-04-04 21:27:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 21:27:53] mff2101.farm.particle.cz
[2025-04-04 21:27:53] apptainer works
[2025-04-04 21:27:53] Set ATHENA_PROC_NUMBER=12
[2025-04-04 21:27:53] Set ATHENA_CORE_NUMBER=12
[2025-04-04 21:27:54] Starting ATLAS job with PandaID=6586696745
[2025-04-04 21:27:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-05 01:01:09]  *** The last 200 lines of the pilot log: ***
[2025-04-05 01:01:09] 2025-04-04 22:59:38,296 | INFO     | intersect: -102713659654.95369
[2025-04-05 01:01:09] 2025-04-04 22:59:38,297 | INFO     | chi2: 7.7245914424006505
[2025-04-05 01:01:09] 2025-04-04 22:59:38,297 | INFO     | sum of square deviations: 2443532291.4773965
[2025-04-05 01:01:09] 2025-04-04 22:59:38,302 | INFO     | sum of deviations: 165914243938.37177
[2025-04-05 01:01:09] 2025-04-04 22:59:38,302 | INFO     | mean x: 1743801169.1507537
[2025-04-05 01:01:09] 2025-04-04 22:59:38,302 | INFO     | mean y: 2624524.854271357
[2025-04-05 01:01:09] 2025-04-04 22:59:38,302 | INFO     | -- intersect: -118400333998.59047
[2025-04-05 01:01:09] 2025-04-04 22:59:38,302 | INFO     | intersect: -118400333998.59047
[2025-04-05 01:01:09] 2025-04-04 22:59:38,302 | INFO     | chi2: 6.935510704686754
[2025-04-05 01:01:09] 2025-04-04 22:59:38,303 | INFO     | current chi2=6.935510704686754 (change=10.215177638814588 %)
[2025-04-05 01:01:09] 2025-04-04 22:59:38,303 | INFO     | right removable region: 198
[2025-04-05 01:01:09] 2025-04-04 22:59:38,303 | INFO     | sum of square deviations: 2443513991.4773965
[2025-04-05 01:01:09] 2025-04-04 22:59:38,304 | INFO     | sum of deviations: 89429327147.98483
[2025-04-05 01:01:09] 2025-04-04 22:59:38,304 | INFO     | mean x: 1743801474.1507537
[2025-04-05 01:01:09] 2025-04-04 22:59:38,304 | INFO     | mean y: 2668896.1005025124
[2025-04-05 01:01:09] 2025-04-04 22:59:38,304 | INFO     | -- intersect: -63818120776.83989
[2025-04-05 01:01:09] 2025-04-04 22:59:38,304 | INFO     | intersect: -63818120776.83989
[2025-04-05 01:01:09] 2025-04-04 22:59:38,305 | INFO     | chi2: 4.072308472384262
[2025-04-05 01:01:09] 2025-04-04 22:59:38,305 | INFO     | current chi2=4.072308472384262 (change=47.28124454542454 %)
[2025-04-05 01:01:09] 2025-04-04 22:59:38,305 | INFO     | sum of square deviations: 2263901473.8608346
[2025-04-05 01:01:09] 2025-04-04 22:59:38,306 | INFO     | sum of deviations: 40778305676.39696
[2025-04-05 01:01:09] 2025-04-04 22:59:38,306 | INFO     | mean x: 1743801626.6546392
[2025-04-05 01:01:09] 2025-04-04 22:59:38,306 | INFO     | mean y: 2710192.1701030927
[2025-04-05 01:01:09] 2025-04-04 22:59:38,306 | INFO     | -- intersect: -31407347441.412373
[2025-04-05 01:01:09] 2025-04-04 22:59:38,306 | INFO     | intersect: -31407347441.412373
[2025-04-05 01:01:09] 2025-04-04 22:59:38,306 | INFO     | chi2: 2.231887745594543
[2025-04-05 01:01:09] 2025-04-04 22:59:38,306 | INFO     | current chi2=2.231887745594543 (change=45.193549046449974 %)
[2025-04-05 01:01:09] 2025-04-04 22:59:38,307 | INFO     | sum of square deviations: 2093312381.2380936
[2025-04-05 01:01:09] 2025-04-04 22:59:38,308 | INFO     | sum of deviations: 3032215227.095232
[2025-04-05 01:01:09] 2025-04-04 22:59:38,308 | INFO     | mean x: 1743801779.1587303
[2025-04-05 01:01:09] 2025-04-04 22:59:38,308 | INFO     | mean y: 2743814.396825397
[2025-04-05 01:01:09] 2025-04-04 22:59:38,308 | INFO     | -- intersect: -2523196582.8378716
[2025-04-05 01:01:09] 2025-04-04 22:59:38,308 | INFO     | intersect: -2523196582.8378716
[2025-04-05 01:01:09] 2025-04-04 22:59:38,308 | INFO     | chi2: 1.0464623781149602
[2025-04-05 01:01:09] 2025-04-04 22:59:38,308 | INFO     | current chi2=1.0464623781149602 (change=53.11312676094301 %)
[2025-04-05 01:01:09] 2025-04-04 22:59:38,309 | INFO     | sum of square deviations: 1931514151.1086977
[2025-04-05 01:01:09] 2025-04-04 22:59:38,309 | INFO     | sum of deviations: -12402733971.83696
[2025-04-05 01:01:09] 2025-04-04 22:59:38,310 | INFO     | mean x: 1743801931.6630435
[2025-04-05 01:01:09] 2025-04-04 22:59:38,310 | INFO     | mean y: 2758343.7445652173
[2025-04-05 01:01:09] 2025-04-04 22:59:38,310 | INFO     | -- intersect: 11200145349.98401
[2025-04-05 01:01:09] 2025-04-04 22:59:38,310 | INFO     | intersect: 11200145349.98401
[2025-04-05 01:01:09] 2025-04-04 22:59:38,310 | INFO     | chi2: 0.8539466701911194
[2025-04-05 01:01:09] 2025-04-04 22:59:38,310 | INFO     | current chi2=0.8539466701911194 (change=18.396811194553223 %)
[2025-04-05 01:01:09] 2025-04-04 22:59:38,310 | INFO     | left removable region: 40
[2025-04-05 01:01:09] 2025-04-04 22:59:38,310 | INFO     | sum of square deviations: 1222973556.1519017
[2025-04-05 01:01:09] 2025-04-04 22:59:38,311 | INFO     | sum of deviations: 5587031754.734179
[2025-04-05 01:01:09] 2025-04-04 22:59:38,311 | INFO     | mean x: 1743802358.6455696
[2025-04-05 01:01:09] 2025-04-04 22:59:38,311 | INFO     | mean y: 2766535.120253165
[2025-04-05 01:01:09] 2025-04-04 22:59:38,311 | INFO     | -- intersect: -7963619248.713529
[2025-04-05 01:01:09] 2025-04-04 22:59:38,311 | INFO     | intersect: -7963619248.713529
[2025-04-05 01:01:09] 2025-04-04 22:59:38,312 | INFO     | chi2: 0.0027126302409959755
[2025-04-05 01:01:09] 2025-04-04 22:59:38,312 | INFO     | -- intersect: -7963619248.713529
[2025-04-05 01:01:09] 2025-04-04 22:59:38,312 | INFO     | current memory leak: 4.57 B/s (using 158 data points, chi2=0.00)
[2025-04-05 01:01:09] 2025-04-04 22:59:38,312 | INFO     | ..............................
[2025-04-05 01:01:09] 2025-04-04 22:59:38,312 | INFO     | . Timing measurements:
[2025-04-05 01:01:09] 2025-04-04 22:59:38,312 | INFO     | . get job = 0 s
[2025-04-05 01:01:09] 2025-04-04 22:59:38,312 | INFO     | . initial setup = 2 s
[2025-04-05 01:01:09] 2025-04-04 22:59:38,313 | INFO     | . payload setup = 49 s
[2025-04-05 01:01:09] 2025-04-04 22:59:38,313 | INFO     | . stage-in = 0 s
[2025-04-05 01:01:09] 2025-04-04 22:59:38,313 | INFO     | . payload execution = 12441 s
[2025-04-05 01:01:09] 2025-04-04 22:59:38,313 | INFO     | . stage-out = 2 s
[2025-04-05 01:01:09] 2025-04-04 22:59:38,313 | INFO     | . log creation = 0 s
[2025-04-05 01:01:09] 2025-04-04 22:59:38,313 | INFO     | ..............................
[2025-04-05 01:01:09] 2025-04-04 22:59:38,454 | INFO     | 
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | job summary report
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | --------------------------------------------------
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | PanDA job id: 6586696745
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | task id: 43634898
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | errors: (none)
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | pilot state: finished 
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | transexitcode: 0
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | exeerrorcode: 0
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | exeerrordiag: 
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | exitcode: 0
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | exitmsg: OK
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | cpuconsumptiontime: 69193 s
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | nevents: 400
[2025-04-05 01:01:09] 2025-04-04 22:59:38,455 | INFO     | neventsw: 0
[2025-04-05 01:01:09] 2025-04-04 22:59:38,456 | INFO     | pid: 2555648
[2025-04-05 01:01:09] 2025-04-04 22:59:38,456 | INFO     | pgrp: 2555648
[2025-04-05 01:01:09] 2025-04-04 22:59:38,456 | INFO     | corecount: 12
[2025-04-05 01:01:09] 2025-04-04 22:59:38,456 | INFO     | event service: False
[2025-04-05 01:01:09] 2025-04-04 22:59:38,456 | INFO     | sizes: {0: 2417400, 1: 2417400, 12: 2417428, 22: 2417456, 33: 2417484, 41: 2417746, 44: 2417902, 12494: 2447481, 12498: 2456424, 12501: 2456480, 12541: 2456650}
[2025-04-05 01:01:09] 2025-04-04 22:59:38,456 | INFO     | --------------------------------------------------
[2025-04-05 01:01:09] 2025-04-04 22:59:38,456 | INFO     | 
[2025-04-05 01:01:09] 2025-04-04 22:59:38,456 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-04-05 01:01:09] 2025-04-04 22:59:38,626 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,626 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,626 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,626 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,626 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,626 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,626 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-05 01:01:09] 2025-04-04 22:59:38,627 | INFO     | job 6586696745 has completed (purged errors)
[2025-04-05 01:01:09] 2025-04-04 22:59:38,628 | INFO     | overall cleanup function is called
[2025-04-05 01:01:09] 2025-04-04 22:59:39,642 | INFO     | --- collectZombieJob: --- 10, [2555648]
[2025-04-05 01:01:09] 2025-04-04 22:59:39,642 | INFO     | zombie collector waiting for pid 2555648
[2025-04-05 01:01:09] 2025-04-04 22:59:39,642 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-05 01:01:09] 2025-04-04 22:59:39,642 | INFO     | collected zombie processes
[2025-04-05 01:01:09] 2025-04-04 22:59:39,642 | INFO     | will attempt to kill all subprocesses of pid=2555648
[2025-04-05 01:01:09] 2025-04-04 22:59:40,796 | INFO     | process IDs to be killed: [2555648] (in reverse order)
[2025-04-05 01:01:09] 2025-04-04 22:59:41,507 | WARNING  | found no corresponding commands to process id(s)
[2025-04-05 01:01:09] 2025-04-04 22:59:41,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-05 01:01:09] 2025-04-04 22:59:41,568 | INFO     | did not find any defunct processes belonging to 2555648
[2025-04-05 01:01:09] 2025-04-04 22:59:41,627 | INFO     | did not find any defunct processes belonging to 2555648
[2025-04-05 01:01:09] 2025-04-04 22:59:41,628 | INFO     | ready for new job
[2025-04-05 01:01:09] 2025-04-04 22:59:41,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-05 01:01:09] 2025-04-04 22:59:41,629 | INFO     | **************************************
[2025-04-05 01:01:09] 2025-04-04 22:59:41,630 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-05 01:01:09] 2025-04-04 22:59:41,630 | INFO     | **************************************
[2025-04-05 01:01:09] 2025-04-04 22:59:41,630 | INFO     | 
[2025-04-05 01:01:09] 2025-04-04 22:59:41,646 | INFO     | architecture information:
[2025-04-05 01:01:09] 2025-04-04 22:59:41,651 | INFO     | executing command: cat /etc/os-release
[2025-04-05 01:01:09] 2025-04-04 22:59:41,766 | INFO     | cat /etc/os-release:
[2025-04-05 01:01:09] NAME="CentOS Linux"
[2025-04-05 01:01:09] VERSION="7 (Core)"
[2025-04-05 01:01:09] ID="centos"
[2025-04-05 01:01:09] ID_LIKE="rhel fedora"
[2025-04-05 01:01:09] VERSION_ID="7"
[2025-04-05 01:01:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-05 01:01:09] ANSI_COLOR="0;31"
[2025-04-05 01:01:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-05 01:01:09] HOME_URL="https://www.centos.org/"
[2025-04-05 01:01:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-05 01:01:09] 
[2025-04-05 01:01:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-05 01:01:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-05 01:01:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-05 01:01:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-05 01:01:09] 
[2025-04-05 01:01:09] 2025-04-04 22:59:41,766 | INFO     | **************************************
[2025-04-05 01:01:09] 2025-04-04 22:59:41,897 | INFO     | PID=2529269 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-05 01:01:09] 2025-04-04 22:59:41,897 | INFO     | .. there are 97 such processes running
[2025-04-05 01:01:09] 2025-04-04 22:59:42,272 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-04-05 01:01:09] 2025-04-04 22:59:42,376 | INFO     | sufficient remaining disk space (626760089600 B)
[2025-04-05 01:01:09] 2025-04-04 22:59:42,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-05 01:01:09] 2025-04-04 22:59:42,376 | INFO     | current server update state: UPDATING_FINAL
[2025-04-05 01:01:09] 2025-04-04 22:59:42,376 | INFO     | update_server=False
[2025-04-05 01:01:09] 2025-04-04 22:59:42,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-05 01:01:09] 2025-04-04 22:59:42,378 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-05 01:01:09] 2025-04-04 22:59:42,379 | INFO     | found 0 job(s) in 20 queues
[2025-04-05 01:01:09] 2025-04-04 22:59:42,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-05 01:01:09] 2025-04-04 22:59:42,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-05 01:01:09] 2025-04-04 22:59:42,633 | INFO     | all job control threads have been joined
[2025-04-05 01:01:09] 2025-04-04 22:59:42,808 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-05 01:01:09] 2025-04-04 22:59:42,808 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-05 01:01:09] 2025-04-04 22:59:42,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-05 01:01:09] 2025-04-04 22:59:42,808 | INFO     | will abort loop
[2025-04-05 01:01:09] 2025-04-04 22:59:43,383 | INFO     | [job] retrieve thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:43,386 | INFO     | [job] create_data_payload thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:43,418 | INFO     | all data control threads have been joined
[2025-04-05 01:01:09] 2025-04-04 22:59:43,431 | INFO     | all payload control threads have been joined
[2025-04-05 01:01:09] 2025-04-04 22:59:43,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-05 01:01:09] 2025-04-04 22:59:43,640 | INFO     | [job] control thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:43,656 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:43,814 | INFO     | [job] job monitor thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:43,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-05 01:01:09] 2025-04-04 22:59:44,122 | INFO     | [payload] failed_post thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:44,149 | INFO     | [data] copytool_in thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:44,215 | INFO     | [payload] validate_pre thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:44,343 | INFO     | [payload] validate_post thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:44,425 | INFO     | [data] control thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:44,438 | INFO     | [payload] control thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:44,491 | INFO     | [job] queue monitor thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:44,647 | INFO     | [job] validate thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:44,878 | INFO     | [payload] execute_payloads thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:45,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-05 01:01:09] 2025-04-04 22:59:45,870 | INFO     | [data] copytool_out thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:49,110 | INFO     | [data] queue_monitor thread has finished
[2025-04-05 01:01:09] 2025-04-04 22:59:50,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913844258624)>', '<ExcThread(monitor, started 139913055958784)>']
[2025-04-05 01:01:09] 2025-04-04 22:59:51,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-05 01:01:09] 2025-04-04 22:59:51,433 | INFO     | [monitor] control thread has ended
[2025-04-05 01:01:09] 2025-04-04 22:59:55,902 | INFO     | all workflow threads have been joined
[2025-04-05 01:01:09] 2025-04-04 22:59:55,902 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-05 01:01:09] 2025-04-04 22:59:55,902 | INFO     | traces error code: 0
[2025-04-05 01:01:09] 2025-04-04 22:59:55,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-05 01:01:09] 2025-04-04 22:59:56,151 [wrapper] ==== pilot stdout END ====
[2025-04-05 01:01:09] 2025-04-04 22:59:56,193 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-05 01:01:09] 2025-04-04 22:59:56,223 [wrapper] pilotpid: 2529269
[2025-04-05 01:01:09] 2025-04-04 22:59:56,248 [wrapper] Pilot exit status: 0
[2025-04-05 01:01:09] 2025-04-04 22:59:56,393 [wrapper] pandaids: 6586696745
[2025-04-05 01:01:09] 2025-04-04 22:59:56,955 [wrapper] cleanup supervisor_pilot  173954 2529270
[2025-04-05 01:01:09] 2025-04-04 22:59:56,999 [wrapper] Test setup, not cleaning
[2025-04-05 01:01:09] 2025-04-04 22:59:57,025 [wrapper] apfmon messages muted
[2025-04-05 01:01:09] 2025-04-04 22:59:57,076 [wrapper] ==== wrapper stdout END ====
[2025-04-05 01:01:09] 2025-04-04 22:59:57,126 [wrapper] ==== wrapper stderr END ====
[2025-04-05 01:01:09]  *** Error codes and diagnostics ***
[2025-04-05 01:01:09]     "exeErrorCode": 0,
[2025-04-05 01:01:09]     "exeErrorDiag": "",
[2025-04-05 01:01:09]     "pilotErrorCode": 0,
[2025-04-05 01:01:09]     "pilotErrorDiag": "",
[2025-04-05 01:01:09]  *** Listing of results directory ***
[2025-04-05 01:01:09] total 672916
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc    495897 Apr  4 03:37 pilot3.tar.gz
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc      5111 Apr  4 03:41 queuedata.json
[2025-04-05 01:01:09] -rwx------ 1 boinc boinc     37140 Apr  4 03:43 runpilot2-wrapper.sh
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc       100 Apr  4 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-05 01:01:09] -rwxr-xr-x 1 boinc boinc      7986 Apr  4 21:27 run_atlas
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc       105 Apr  4 21:27 job.xml
[2025-04-05 01:01:09] -rw-r--r-- 2 boinc boinc 356871858 Apr  4 21:27 EVNT.43634896._000748.pool.root.1
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc      6653 Apr  4 21:27 init_data.xml
[2025-04-05 01:01:09] drwxrwx--x 2 boinc boinc      4096 Apr  4 21:27 shared
[2025-04-05 01:01:09] -rw-r--r-- 2 boinc boinc    508886 Apr  4 21:27 input.tar.gz
[2025-04-05 01:01:09] -rw-r--r-- 2 boinc boinc     17569 Apr  4 21:27 start_atlas.sh
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc         0 Apr  4 21:27 boinc_lockfile
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc      2599 Apr  4 21:27 pandaJob.out
[2025-04-05 01:01:09] -rw------- 1 boinc boinc       424 Apr  4 21:27 setup.sh.local
[2025-04-05 01:01:09] -rw------- 1 boinc boinc    979987 Apr  4 21:29 agis_schedconf.cvmfs.json
[2025-04-05 01:01:09] drwx------ 4 boinc boinc      4096 Apr  4 21:29 pilot3
[2025-04-05 01:01:09] -rw------- 1 boinc boinc 325363469 Apr  5 00:57 HITS.43634898._019617.pool.root.1
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc       531 Apr  5 00:57 boinc_task_state.xml
[2025-04-05 01:01:09] -rw------- 1 boinc boinc      1032 Apr  5 00:58 memory_monitor_summary.json
[2025-04-05 01:01:09] -rw------- 1 boinc boinc   1603525 Apr  5 00:58 agis_ddmendpoints.agis.ALL.json
[2025-04-05 01:01:09] -rw------- 1 boinc boinc    436959 Apr  5 00:58 log.43634898._019617.job.log.tgz.1
[2025-04-05 01:01:09] -rw------- 1 boinc boinc        95 Apr  5 00:59 pilot_heartbeat.json
[2025-04-05 01:01:09] -rw------- 1 boinc boinc      7703 Apr  5 00:59 heartbeat.json
[2025-04-05 01:01:09] -rw------- 1 boinc boinc      5059 Apr  5 00:59 pilotlog.txt
[2025-04-05 01:01:09] -rw------- 1 boinc boinc   1057413 Apr  5 00:59 log.43634898._019617.job.log.1
[2025-04-05 01:01:09] -rw------- 1 boinc boinc       357 Apr  5 00:59 output.list
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc       620 Apr  5 00:59 runtime_log
[2025-04-05 01:01:09] -rw------- 1 boinc boinc   1515520 Apr  5 00:59 result.tar.gz
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc     11079 Apr  5 00:59 runtime_log.err
[2025-04-05 01:01:09] -rw------- 1 boinc boinc       668 Apr  5 00:59 mrALDmWGlK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmJRILDmv6LIcn.diag
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc        27 Apr  5 01:01 wrapper_checkpoint.txt
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc      8192 Apr  5 01:01 boinc_mmap_file
[2025-04-05 01:01:09] -rw-r--r-- 1 boinc boinc     21112 Apr  5 01:01 stderr.txt
[2025-04-05 01:01:09] HITS file was successfully produced:
[2025-04-05 01:01:09] -rw------- 1 boinc boinc 325363469 Apr  5 00:57 shared/HITS.pool.root.1
[2025-04-05 01:01:09]  *** Contents of shared directory: ***
[2025-04-05 01:01:10] total 668256
[2025-04-05 01:01:10] -rw-r--r-- 2 boinc boinc 356871858 Apr  4 21:27 ATLAS.root_0
[2025-04-05 01:01:10] -rw-r--r-- 2 boinc boinc    508886 Apr  4 21:27 input.tar.gz
[2025-04-05 01:01:10] -rw-r--r-- 2 boinc boinc     17569 Apr  4 21:27 start_atlas.sh
[2025-04-05 01:01:10] -rw------- 1 boinc boinc 325363469 Apr  5 00:57 HITS.pool.root.1
[2025-04-05 01:01:10] -rw------- 1 boinc boinc   1515520 Apr  5 00:59 result.tar.gz
01:01:12 (2510354): run_atlas exited; CPU time 69966.238701
01:01:12 (2510354): called boinc_finish(0)

</stderr_txt>
]]>

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