Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:40:36 (2703474): wrapper (7.7.26015): starting
01:40:36 (2703474): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 01:40:36] Arguments: --nthreads 8
[2025-04-04 01:40:36] Threads: 8
[2025-04-04 01:40:36] Checking for CVMFS
[2025-04-04 01:40:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 01:40:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 01:40:37] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 01:40:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 01:40:38] 2.12.6.0 1572722 73475 351096 144478 3 337 17283194 32935936 22849 130560 0 14149869 99.684 8043589 13078 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 01:40:38] CVMFS is ok
[2025-04-04 01:40:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 01:40:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 01:40:38] Further information can be found at the LHC@home message board.
[2025-04-04 01:40:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 01:40:38] Checking for apptainer binary...
[2025-04-04 01:40:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 01:40:38] Running /usr/bin/apptainer --version
[2025-04-04 01:40:38] apptainer version 1.4.0-1.el9
[2025-04-04 01:40:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 01:40:39] c6-12-27-3.aglt2.org
[2025-04-04 01:40:39] apptainer works
[2025-04-04 01:40:39] Set ATHENA_PROC_NUMBER=8
[2025-04-04 01:40:39] Set ATHENA_CORE_NUMBER=8
[2025-04-04 01:40:39] Starting ATLAS job with PandaID=6586405111
[2025-04-04 01:40:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 13:57:42]  *** The last 200 lines of the pilot log: ***
[2025-04-04 13:57:42] 2025-04-04 17:57:25,322 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6586405111/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 13:57:42] 2025-04-04 17:57:25,346 | INFO     | extracted standard info from prmon json
[2025-04-04 13:57:42] 2025-04-04 17:57:25,346 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 13:57:42] 2025-04-04 17:57:25,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 13:57:42] 2025-04-04 17:57:25,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 13:57:42] 2025-04-04 17:57:25,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 13:57:42] 2025-04-04 17:57:25,408 | INFO     | fitting pss+swap vs Time
[2025-04-04 13:57:42] 2025-04-04 17:57:25,421 | INFO     | sum of square deviations: 116707121358.57062
[2025-04-04 13:57:42] 2025-04-04 17:57:25,466 | INFO     | sum of deviations: 435556905903.52673
[2025-04-04 13:57:42] 2025-04-04 17:57:25,466 | INFO     | mean x: 1743767404.2963989
[2025-04-04 13:57:42] 2025-04-04 17:57:25,466 | INFO     | mean y: 2156454.8947368423
[2025-04-04 13:57:42] 2025-04-04 17:57:25,475 | INFO     | -- intersect: -6505672085.3812895
[2025-04-04 13:57:42] 2025-04-04 17:57:25,475 | INFO     | intersect: -6505672085.3812895
[2025-04-04 13:57:42] 2025-04-04 17:57:25,476 | INFO     | chi2: 9.694228907221017
[2025-04-04 13:57:42] 2025-04-04 17:57:25,477 | INFO     | sum of square deviations: 114299428327.87743
[2025-04-04 13:57:42] 2025-04-04 17:57:25,525 | INFO     | sum of deviations: 595348791748.7767
[2025-04-04 13:57:42] 2025-04-04 17:57:25,526 | INFO     | mean x: 1743767251.8019526
[2025-04-04 13:57:42] 2025-04-04 17:57:25,526 | INFO     | mean y: 2166562.7308228733
[2025-04-04 13:57:42] 2025-04-04 17:57:25,526 | INFO     | -- intersect: -9080553636.650738
[2025-04-04 13:57:42] 2025-04-04 17:57:25,526 | INFO     | intersect: -9080553636.650738
[2025-04-04 13:57:42] 2025-04-04 17:57:25,539 | INFO     | chi2: 6.930240775281891
[2025-04-04 13:57:42] 2025-04-04 17:57:25,539 | INFO     | current chi2=6.930240775281891 (change=28.511686266045285 %)
[2025-04-04 13:57:42] 2025-04-04 17:57:25,540 | INFO     | sum of square deviations: 111925041267.25279
[2025-04-04 13:57:42] 2025-04-04 17:57:25,585 | INFO     | sum of deviations: 624489943807.7645
[2025-04-04 13:57:42] 2025-04-04 17:57:25,585 | INFO     | mean x: 1743767099.3061798
[2025-04-04 13:57:42] 2025-04-04 17:57:25,586 | INFO     | mean y: 2168434.2808988765
[2025-04-04 13:57:42] 2025-04-04 17:57:25,586 | INFO     | -- intersect: -9727245158.33357
[2025-04-04 13:57:42] 2025-04-04 17:57:25,586 | INFO     | intersect: -9727245158.33357
[2025-04-04 13:57:42] 2025-04-04 17:57:25,587 | INFO     | chi2: 6.772586466571223
[2025-04-04 13:57:42] 2025-04-04 17:57:25,587 | INFO     | current chi2=6.772586466571223 (change=2.274874911604424 %)
[2025-04-04 13:57:42] 2025-04-04 17:57:25,587 | INFO     | right removable region: 711
[2025-04-04 13:57:42] 2025-04-04 17:57:25,600 | INFO     | sum of square deviations: 114299077577.87743
[2025-04-04 13:57:42] 2025-04-04 17:57:25,645 | INFO     | sum of deviations: 258324928899.8468
[2025-04-04 13:57:42] 2025-04-04 17:57:25,645 | INFO     | mean x: 1743767556.8019526
[2025-04-04 13:57:42] 2025-04-04 17:57:25,645 | INFO     | mean y: 2167671.2524407255
[2025-04-04 13:57:42] 2025-04-04 17:57:25,645 | INFO     | -- intersect: -3938884519.8451204
[2025-04-04 13:57:42] 2025-04-04 17:57:25,645 | INFO     | intersect: -3938884519.8451204
[2025-04-04 13:57:42] 2025-04-04 17:57:25,646 | INFO     | chi2: 6.726239623738257
[2025-04-04 13:57:42] 2025-04-04 17:57:25,646 | INFO     | current chi2=6.726239623738257 (change=30.61604292500222 %)
[2025-04-04 13:57:42] 2025-04-04 17:57:25,660 | INFO     | sum of square deviations: 111924383259.63881
[2025-04-04 13:57:42] 2025-04-04 17:57:25,705 | INFO     | sum of deviations: 126474198432.10208
[2025-04-04 13:57:42] 2025-04-04 17:57:25,705 | INFO     | mean x: 1743767709.3075843
[2025-04-04 13:57:42] 2025-04-04 17:57:25,705 | INFO     | mean y: 2176137.3328651683
[2025-04-04 13:57:42] 2025-04-04 17:57:25,705 | INFO     | -- intersect: -1968275848.762548
[2025-04-04 13:57:42] 2025-04-04 17:57:25,705 | INFO     | intersect: -1968275848.762548
[2025-04-04 13:57:42] 2025-04-04 17:57:25,707 | INFO     | chi2: 5.180522949249857
[2025-04-04 13:57:42] 2025-04-04 17:57:25,707 | INFO     | current chi2=5.180522949249857 (change=22.980398572677277 %)
[2025-04-04 13:57:42] 2025-04-04 17:57:25,707 | INFO     | left removable region: 20
[2025-04-04 13:57:42] 2025-04-04 17:57:25,708 | INFO     | sum of square deviations: 102310367777.16061
[2025-04-04 13:57:42] 2025-04-04 17:57:25,764 | INFO     | sum of deviations: 136122874878.47594
[2025-04-04 13:57:42] 2025-04-04 17:57:25,764 | INFO     | mean x: 1743767678.8263385
[2025-04-04 13:57:42] 2025-04-04 17:57:25,764 | INFO     | mean y: 2200669.512301013
[2025-04-04 13:57:42] 2025-04-04 17:57:25,764 | INFO     | -- intersect: -2317863999.5836983
[2025-04-04 13:57:42] 2025-04-04 17:57:25,764 | INFO     | intersect: -2317863999.5836983
[2025-04-04 13:57:42] 2025-04-04 17:57:25,765 | INFO     | chi2: 0.6560266605205008
[2025-04-04 13:57:42] 2025-04-04 17:57:25,766 | INFO     | -- intersect: -2317863999.5836983
[2025-04-04 13:57:42] 2025-04-04 17:57:25,766 | INFO     | current memory leak: 1.33 B/s (using 691 data points, chi2=0.66)
[2025-04-04 13:57:42] 2025-04-04 17:57:25,767 | INFO     | ..............................
[2025-04-04 13:57:42] 2025-04-04 17:57:25,767 | INFO     | . Timing measurements:
[2025-04-04 13:57:42] 2025-04-04 17:57:25,767 | INFO     | . get job = 0 s
[2025-04-04 13:57:42] 2025-04-04 17:57:25,767 | INFO     | . initial setup = 5 s
[2025-04-04 13:57:42] 2025-04-04 17:57:25,767 | INFO     | . payload setup = 37 s
[2025-04-04 13:57:42] 2025-04-04 17:57:25,779 | INFO     | . stage-in = 0 s
[2025-04-04 13:57:42] 2025-04-04 17:57:25,779 | INFO     | . payload execution = 44008 s
[2025-04-04 13:57:42] 2025-04-04 17:57:25,779 | INFO     | . stage-out = 6 s
[2025-04-04 13:57:42] 2025-04-04 17:57:25,779 | INFO     | . log creation = 1 s
[2025-04-04 13:57:42] 2025-04-04 17:57:25,779 | INFO     | ..............................
[2025-04-04 13:57:42] 2025-04-04 17:57:26,442 | INFO     | 
[2025-04-04 13:57:42] 2025-04-04 17:57:26,442 | INFO     | job summary report
[2025-04-04 13:57:42] 2025-04-04 17:57:26,442 | INFO     | --------------------------------------------------
[2025-04-04 13:57:42] 2025-04-04 17:57:26,442 | INFO     | PanDA job id: 6586405111
[2025-04-04 13:57:42] 2025-04-04 17:57:26,442 | INFO     | task id: 43634898
[2025-04-04 13:57:42] 2025-04-04 17:57:26,442 | INFO     | errors: (none)
[2025-04-04 13:57:42] 2025-04-04 17:57:26,442 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 13:57:42] 2025-04-04 17:57:26,442 | INFO     | pilot state: finished 
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | transexitcode: 0
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | exeerrorcode: 0
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | exeerrordiag: 
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | exitcode: 0
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | exitmsg: OK
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | cpuconsumptiontime: 85733 s
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | nevents: 400
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | neventsw: 0
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | pid: 2721734
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | pgrp: 2721734
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | corecount: 8
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | event service: False
[2025-04-04 13:57:42] 2025-04-04 17:57:26,443 | INFO     | sizes: {0: 2417117, 1: 2417372, 2: 2417400, 13: 2417400, 24: 2417456, 29: 2417690, 35: 2417846, 44051: 2461161, 44052: 2461160, 44060: 2470157, 44063: 2470213, 440
[2025-04-04 13:57:42] 2025-04-04 17:57:26,444 | INFO     | --------------------------------------------------
[2025-04-04 13:57:42] 2025-04-04 17:57:26,444 | INFO     | 
[2025-04-04 13:57:42] 2025-04-04 17:57:26,444 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-04-04 13:57:42] 2025-04-04 17:57:26,653 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,653 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,653 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,654 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,655 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 13:57:42] 2025-04-04 17:57:26,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,655 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 13:57:42] 2025-04-04 17:57:26,655 | INFO     | job 6586405111 has completed (purged errors)
[2025-04-04 13:57:42] 2025-04-04 17:57:26,655 | INFO     | overall cleanup function is called
[2025-04-04 13:57:42] 2025-04-04 17:57:27,667 | INFO     | --- collectZombieJob: --- 10, [2721734]
[2025-04-04 13:57:42] 2025-04-04 17:57:27,668 | INFO     | zombie collector waiting for pid 2721734
[2025-04-04 13:57:42] 2025-04-04 17:57:27,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 13:57:42] 2025-04-04 17:57:27,668 | INFO     | collected zombie processes
[2025-04-04 13:57:42] 2025-04-04 17:57:27,668 | INFO     | will attempt to kill all subprocesses of pid=2721734
[2025-04-04 13:57:42] 2025-04-04 17:57:28,730 | INFO     | process IDs to be killed: [2721734] (in reverse order)
[2025-04-04 13:57:42] 2025-04-04 17:57:28,994 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 13:57:42] 2025-04-04 17:57:29,014 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 13:57:42] 2025-04-04 17:57:29,086 | INFO     | did not find any defunct processes belonging to 2721734
[2025-04-04 13:57:42] 2025-04-04 17:57:29,103 | INFO     | did not find any defunct processes belonging to 2721734
[2025-04-04 13:57:42] 2025-04-04 17:57:29,104 | INFO     | ready for new job
[2025-04-04 13:57:42] 2025-04-04 17:57:29,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 13:57:42] 2025-04-04 17:57:29,107 | INFO     | **************************************
[2025-04-04 13:57:42] 2025-04-04 17:57:29,107 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 13:57:42] 2025-04-04 17:57:29,107 | INFO     | **************************************
[2025-04-04 13:57:42] 2025-04-04 17:57:29,107 | INFO     | 
[2025-04-04 13:57:42] 2025-04-04 17:57:29,131 | INFO     | architecture information:
[2025-04-04 13:57:42] 2025-04-04 17:57:29,136 | INFO     | executing command: cat /etc/os-release
[2025-04-04 13:57:42] 2025-04-04 17:57:29,259 | INFO     | cat /etc/os-release:
[2025-04-04 13:57:42] NAME="CentOS Linux"
[2025-04-04 13:57:42] VERSION="7 (Core)"
[2025-04-04 13:57:42] ID="centos"
[2025-04-04 13:57:42] ID_LIKE="rhel fedora"
[2025-04-04 13:57:42] VERSION_ID="7"
[2025-04-04 13:57:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 13:57:42] ANSI_COLOR="0;31"
[2025-04-04 13:57:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 13:57:42] HOME_URL="https://www.centos.org/"
[2025-04-04 13:57:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 13:57:42] 
[2025-04-04 13:57:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 13:57:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 13:57:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 13:57:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 13:57:42] 
[2025-04-04 13:57:42] 2025-04-04 17:57:29,259 | INFO     | **************************************
[2025-04-04 13:57:42] 2025-04-04 17:57:29,763 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-04-04 13:57:42] 2025-04-04 17:57:29,825 | INFO     | sufficient remaining disk space (92363816960 B)
[2025-04-04 13:57:42] 2025-04-04 17:57:29,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 13:57:42] 2025-04-04 17:57:29,826 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 13:57:42] 2025-04-04 17:57:29,826 | INFO     | update_server=False
[2025-04-04 13:57:42] 2025-04-04 17:57:29,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 13:57:42] 2025-04-04 17:57:29,826 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 13:57:42] 2025-04-04 17:57:29,826 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 13:57:42] 2025-04-04 17:57:29,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 13:57:42] 2025-04-04 17:57:29,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 13:57:42] 2025-04-04 17:57:29,939 | INFO     | all data control threads have been joined
[2025-04-04 13:57:42] 2025-04-04 17:57:30,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 13:57:42] 2025-04-04 17:57:30,074 | INFO     | aborting loop
[2025-04-04 13:57:42] 2025-04-04 17:57:30,103 | INFO     | all payload control threads have been joined
[2025-04-04 13:57:42] 2025-04-04 17:57:30,415 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 13:57:42] 2025-04-04 17:57:30,508 | INFO     | all job control threads have been joined
[2025-04-04 13:57:42] 2025-04-04 17:57:30,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 13:57:42] 2025-04-04 17:57:30,850 | INFO     | [job] retrieve thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:30,945 | INFO     | [data] control thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:31,080 | INFO     | [job] job monitor thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:31,109 | INFO     | [payload] control thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:31,185 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:31,302 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:31,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:31,423 | INFO     | [data] copytool_in thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:31,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 13:57:42] 2025-04-04 17:57:31,515 | INFO     | [job] control thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:31,594 | INFO     | [payload] validate_post thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:31,977 | INFO     | [job] validate thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:32,166 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:32,400 | INFO     | [payload] failed_post thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:32,422 | INFO     | [data] copytool_out thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:32,448 | INFO     | [job] queue monitor thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:34,691 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 13:57:42] 2025-04-04 17:57:35,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140317329131328)>', '<ExcThread(monitor, started 140316849993472)>']
[2025-04-04 13:57:42] 2025-04-04 17:57:35,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 13:57:42] 2025-04-04 17:57:35,884 | INFO     | [monitor] control thread has ended
[2025-04-04 13:57:42] 2025-04-04 17:57:40,531 | INFO     | all workflow threads have been joined
[2025-04-04 13:57:42] 2025-04-04 17:57:40,532 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 13:57:42] 2025-04-04 17:57:40,532 | INFO     | traces error code: 0
[2025-04-04 13:57:42] 2025-04-04 17:57:40,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 13:57:42] 2025-04-04 17:57:41,055 [wrapper] ==== pilot stdout END ====
[2025-04-04 13:57:42] 2025-04-04 17:57:41,088 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 13:57:42] 2025-04-04 17:57:41,127 [wrapper] pilotpid: 2707637
[2025-04-04 13:57:42] 2025-04-04 17:57:41,134 [wrapper] Pilot exit status: 0
[2025-04-04 13:57:42] 2025-04-04 17:57:41,249 [wrapper] pandaids: 6586405111
[2025-04-04 13:57:42] 2025-04-04 17:57:41,356 [wrapper] cleanup supervisor_pilot 2062529 2707638
[2025-04-04 13:57:42] 2025-04-04 17:57:41,358 [wrapper] Test setup, not cleaning
[2025-04-04 13:57:42] 2025-04-04 17:57:41,361 [wrapper] apfmon messages muted
[2025-04-04 13:57:42] 2025-04-04 17:57:41,364 [wrapper] ==== wrapper stdout END ====
[2025-04-04 13:57:42] 2025-04-04 17:57:41,366 [wrapper] ==== wrapper stderr END ====
[2025-04-04 13:57:42]  *** Error codes and diagnostics ***
[2025-04-04 13:57:42]     "exeErrorCode": 0,
[2025-04-04 13:57:42]     "exeErrorDiag": "",
[2025-04-04 13:57:42]     "pilotErrorCode": 0,
[2025-04-04 13:57:42]     "pilotErrorDiag": "",
[2025-04-04 13:57:42]  *** Listing of results directory ***
[2025-04-04 13:57:42] total 683580
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 21:13 queuedata.json
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 21:13 pilot3.tar.gz
[2025-04-04 13:57:42] -rwx------. 1 boincer umatlas     37140 Apr  3 21:15 runpilot2-wrapper.sh
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas       100 Apr  4 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 13:57:42] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 01:40 run_atlas
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas       105 Apr  4 01:40 job.xml
[2025-04-04 13:57:42] -rw-r--r--. 2 boincer umatlas 362108437 Apr  4 01:40 EVNT.43634896._000106.pool.root.1
[2025-04-04 13:57:42] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 01:40 start_atlas.sh
[2025-04-04 13:57:42] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 01:40 shared
[2025-04-04 13:57:42] -rw-r--r--. 2 boincer umatlas    508893 Apr  4 01:40 input.tar.gz
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas         0 Apr  4 01:40 boinc_lockfile
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas      2597 Apr  4 01:40 pandaJob.out
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas       467 Apr  4 01:40 setup.sh.local
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas    979986 Apr  4 01:41 agis_schedconf.cvmfs.json
[2025-04-04 13:57:42] drwx------. 4 boincer umatlas      4096 Apr  4 01:41 pilot3
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas 326284129 Apr  4 13:52 HITS.43634898._019543.pool.root.1
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas       532 Apr  4 13:53 boinc_task_state.xml
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas      6859 Apr  4 13:54 init_data.xml
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas      1057 Apr  4 13:56 memory_monitor_summary.json
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas   1603525 Apr  4 13:56 agis_ddmendpoints.agis.ALL.json
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas    636342 Apr  4 13:56 log.43634898._019543.job.log.tgz.1
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas        95 Apr  4 13:57 pilot_heartbeat.json
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas      7747 Apr  4 13:57 heartbeat.json
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas        28 Apr  4 13:57 wrapper_checkpoint.txt
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 13:57 boinc_mmap_file
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas      4476 Apr  4 13:57 pilotlog.txt
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas   3240937 Apr  4 13:57 log.43634898._019543.job.log.1
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas       357 Apr  4 13:57 output.list
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas       620 Apr  4 13:57 runtime_log
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas   3891200 Apr  4 13:57 result.tar.gz
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas     11429 Apr  4 13:57 runtime_log.err
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas       666 Apr  4 13:57 ODWKDmZpkK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmbOILDmmFvQwn.diag
[2025-04-04 13:57:42] -rw-r--r--. 1 boincer umatlas     20997 Apr  4 13:57 stderr.txt
[2025-04-04 13:57:42] HITS file was successfully produced:
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas 326284129 Apr  4 13:52 shared/HITS.pool.root.1
[2025-04-04 13:57:42]  *** Contents of shared directory: ***
[2025-04-04 13:57:42] total 676592
[2025-04-04 13:57:42] -rw-r--r--. 2 boincer umatlas 362108437 Apr  4 01:40 ATLAS.root_0
[2025-04-04 13:57:42] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 01:40 start_atlas.sh
[2025-04-04 13:57:42] -rw-r--r--. 2 boincer umatlas    508893 Apr  4 01:40 input.tar.gz
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas 326284129 Apr  4 13:52 HITS.pool.root.1
[2025-04-04 13:57:42] -rw-------. 1 boincer umatlas   3891200 Apr  4 13:57 result.tar.gz
13:57:43 (2703474): run_atlas exited; CPU time 87855.623069
13:57:43 (2703474): called boinc_finish(0)

</stderr_txt>
]]>

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