Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:31:59 (2585104): wrapper (7.7.26015): starting
01:31:59 (2585104): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 01:31:59] Arguments: --nthreads 8
[2025-04-04 01:31:59] Threads: 8
[2025-04-04 01:31:59] Checking for CVMFS
[2025-04-04 01:32:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 01:32:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 01:32:01] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 01:32:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 01:32:03] 2.12.6.0 425763 23811 276880 144478 0 213 25063454 32935936 25202 130560 0 9696732 99.547 9870916 9306 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 01:32:03] CVMFS is ok
[2025-04-04 01:32:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 01:32:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 01:32:03] Further information can be found at the LHC@home message board.
[2025-04-04 01:32:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 01:32:03] Checking for apptainer binary...
[2025-04-04 01:32:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 01:32:03] Running /usr/bin/apptainer --version
[2025-04-04 01:32:04] apptainer version 1.4.0-1.el9
[2025-04-04 01:32:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 01:32:06] c6-12-25-1.aglt2.org
[2025-04-04 01:32:06] apptainer works
[2025-04-04 01:32:06] Set ATHENA_PROC_NUMBER=8
[2025-04-04 01:32:06] Set ATHENA_CORE_NUMBER=8
[2025-04-04 01:32:06] Starting ATLAS job with PandaID=6586399870
[2025-04-04 01:32:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 21:13:53]  *** The last 200 lines of the pilot log: ***
[2025-04-04 21:13:53] 2025-04-05 01:13:26,781 | INFO     | monitor loop #2676: job 0:6586399870 is in state 'finished'
[2025-04-04 21:13:53] 2025-04-05 01:13:26,788 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 21:13:53] 2025-04-05 01:13:26,922 | INFO     | PID=2593203 has CPU usage=25.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-04 21:13:53] 2025-04-05 01:13:26,923 | INFO     | .. there are 20 such processes running
[2025-04-04 21:13:53] 2025-04-05 01:13:29,296 | INFO     | monitor loop #2677: job 0:6586399870 is in state 'finished'
[2025-04-04 21:13:53] 2025-04-05 01:13:29,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 21:13:53] 2025-04-05 01:13:31,817 | INFO     | monitor loop #2678: job 0:6586399870 is in state 'finished'
[2025-04-04 21:13:53] 2025-04-05 01:13:31,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 21:13:53] 2025-04-05 01:13:33,613 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-04 21:13:53] 2025-04-05 01:13:33,614 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6586399870/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 21:13:53] 2025-04-05 01:13:33,616 | INFO     | extracted standard info from prmon json
[2025-04-04 21:13:53] 2025-04-05 01:13:33,616 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 21:13:53] 2025-04-05 01:13:33,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 21:13:53] 2025-04-05 01:13:33,617 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 21:13:53] 2025-04-05 01:13:33,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 21:13:53] 2025-04-05 01:13:33,666 | INFO     | fitting pss+swap vs Time
[2025-04-04 21:13:53] 2025-04-05 01:13:33,670 | INFO     | sum of square deviations: 479027189168.38446
[2025-04-04 21:13:53] 2025-04-05 01:13:33,742 | INFO     | sum of deviations: 1840700727887.2148
[2025-04-04 21:13:53] 2025-04-05 01:13:33,743 | INFO     | mean x: 1743780323.814879
[2025-04-04 21:13:53] 2025-04-05 01:13:33,743 | INFO     | mean y: 2451946.0570934257
[2025-04-04 21:13:53] 2025-04-05 01:13:33,743 | INFO     | -- intersect: -6698165020.78729
[2025-04-04 21:13:53] 2025-04-05 01:13:33,744 | INFO     | intersect: -6698165020.78729
[2025-04-04 21:13:53] 2025-04-05 01:13:33,747 | INFO     | chi2: 15.943646782851117
[2025-04-04 21:13:53] 2025-04-05 01:13:33,751 | INFO     | sum of square deviations: 472838866954.7017
[2025-04-04 21:13:53] 2025-04-05 01:13:33,820 | INFO     | sum of deviations: 2130597540024.4517
[2025-04-04 21:13:53] 2025-04-05 01:13:33,821 | INFO     | mean x: 1743780171.3205907
[2025-04-04 21:13:53] 2025-04-05 01:13:33,821 | INFO     | mean y: 2459084.166811468
[2025-04-04 21:13:53] 2025-04-05 01:13:33,822 | INFO     | -- intersect: -7854961282.494787
[2025-04-04 21:13:53] 2025-04-05 01:13:33,822 | INFO     | intersect: -7854961282.494787
[2025-04-04 21:13:53] 2025-04-05 01:13:33,826 | INFO     | chi2: 13.226977882696708
[2025-04-04 21:13:53] 2025-04-05 01:13:33,827 | INFO     | current chi2=13.226977882696708 (change=17.039193963306058 %)
[2025-04-04 21:13:53] 2025-04-05 01:13:33,827 | INFO     | right removable region: 1150
[2025-04-04 21:13:53] 2025-04-05 01:13:33,831 | INFO     | sum of square deviations: 472838010028.3428
[2025-04-04 21:13:53] 2025-04-05 01:13:33,903 | INFO     | sum of deviations: 1459916161086.4412
[2025-04-04 21:13:53] 2025-04-05 01:13:33,903 | INFO     | mean x: 1743780476.319722
[2025-04-04 21:13:53] 2025-04-05 01:13:33,904 | INFO     | mean y: 2461326.6238053865
[2025-04-04 21:13:53] 2025-04-05 01:13:33,904 | INFO     | -- intersect: -5381567124.501721
[2025-04-04 21:13:53] 2025-04-05 01:13:33,904 | INFO     | intersect: -5381567124.501721
[2025-04-04 21:13:53] 2025-04-05 01:13:33,908 | INFO     | chi2: 11.838291188016367
[2025-04-04 21:13:53] 2025-04-05 01:13:33,909 | INFO     | current chi2=11.838291188016367 (change=25.749162978512818 %)
[2025-04-04 21:13:53] 2025-04-05 01:13:33,912 | INFO     | sum of square deviations: 466702577289.6856
[2025-04-04 21:13:53] 2025-04-05 01:13:33,981 | INFO     | sum of deviations: 1158881623551.0723
[2025-04-04 21:13:53] 2025-04-05 01:13:33,982 | INFO     | mean x: 1743780628.8219895
[2025-04-04 21:13:53] 2025-04-05 01:13:33,982 | INFO     | mean y: 2468808.27486911
[2025-04-04 21:13:53] 2025-04-05 01:13:33,982 | INFO     | -- intersect: -4327559403.658038
[2025-04-04 21:13:53] 2025-04-05 01:13:33,983 | INFO     | intersect: -4327559403.658038
[2025-04-04 21:13:53] 2025-04-05 01:13:33,986 | INFO     | chi2: 9.365692401163885
[2025-04-04 21:13:53] 2025-04-05 01:13:33,987 | INFO     | current chi2=9.365692401163885 (change=20.886450143711933 %)
[2025-04-04 21:13:53] 2025-04-05 01:13:33,987 | INFO     | left removable region: 20
[2025-04-04 21:13:53] 2025-04-05 01:13:33,991 | INFO     | sum of square deviations: 447427085465.38837
[2025-04-04 21:13:53] 2025-04-05 01:13:34,078 | INFO     | sum of deviations: 976894637647.0933
[2025-04-04 21:13:53] 2025-04-05 01:13:34,078 | INFO     | mean x: 1743780750.8327434
[2025-04-04 21:13:53] 2025-04-05 01:13:34,079 | INFO     | mean y: 2488329.392035398
[2025-04-04 21:13:53] 2025-04-05 01:13:34,079 | INFO     | -- intersect: -3804813731.7892966
[2025-04-04 21:13:53] 2025-04-05 01:13:34,079 | INFO     | intersect: -3804813731.7892966
[2025-04-04 21:13:53] 2025-04-05 01:13:34,083 | INFO     | chi2: 3.5312578544527953
[2025-04-04 21:13:53] 2025-04-05 01:13:34,083 | INFO     | -- intersect: -3804813731.7892966
[2025-04-04 21:13:53] 2025-04-05 01:13:34,084 | INFO     | current memory leak: 2.18 B/s (using 1130 data points, chi2=3.53)
[2025-04-04 21:13:53] 2025-04-05 01:13:34,086 | INFO     | ..............................
[2025-04-04 21:13:53] 2025-04-05 01:13:34,086 | INFO     | . Timing measurements:
[2025-04-04 21:13:53] 2025-04-05 01:13:34,087 | INFO     | . get job = 1 s
[2025-04-04 21:13:53] 2025-04-05 01:13:34,087 | INFO     | . initial setup = 10 s
[2025-04-04 21:13:53] 2025-04-05 01:13:34,087 | INFO     | . payload setup = 74 s
[2025-04-04 21:13:53] 2025-04-05 01:13:34,087 | INFO     | . stage-in = 1 s
[2025-04-04 21:13:53] 2025-04-05 01:13:34,087 | INFO     | . payload execution = 70529 s
[2025-04-04 21:13:53] 2025-04-05 01:13:34,088 | INFO     | . stage-out = 9 s
[2025-04-04 21:13:53] 2025-04-05 01:13:34,088 | INFO     | . log creation = 0 s
[2025-04-04 21:13:53] 2025-04-05 01:13:34,088 | INFO     | ..............................
[2025-04-04 21:13:53] 2025-04-05 01:13:34,412 | INFO     | 
[2025-04-04 21:13:53] 2025-04-05 01:13:34,412 | INFO     | job summary report
[2025-04-04 21:13:53] 2025-04-05 01:13:34,413 | INFO     | --------------------------------------------------
[2025-04-04 21:13:53] 2025-04-05 01:13:34,413 | INFO     | PanDA job id: 6586399870
[2025-04-04 21:13:53] 2025-04-05 01:13:34,413 | INFO     | task id: 43634898
[2025-04-04 21:13:53] 2025-04-05 01:13:34,413 | INFO     | errors: (none)
[2025-04-04 21:13:53] 2025-04-05 01:13:34,413 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 21:13:53] 2025-04-05 01:13:34,414 | INFO     | pilot state: finished 
[2025-04-04 21:13:53] 2025-04-05 01:13:34,414 | INFO     | transexitcode: 0
[2025-04-04 21:13:53] 2025-04-05 01:13:34,414 | INFO     | exeerrorcode: 0
[2025-04-04 21:13:53] 2025-04-05 01:13:34,414 | INFO     | exeerrordiag: 
[2025-04-04 21:13:53] 2025-04-05 01:13:34,415 | INFO     | exitcode: 0
[2025-04-04 21:13:53] 2025-04-05 01:13:34,415 | INFO     | exitmsg: OK
[2025-04-04 21:13:53] 2025-04-05 01:13:34,415 | INFO     | cpuconsumptiontime: 204524 s
[2025-04-04 21:13:53] 2025-04-05 01:13:34,415 | INFO     | nevents: 400
[2025-04-04 21:13:53] 2025-04-05 01:13:34,444 | INFO     | neventsw: 0
[2025-04-04 21:13:53] 2025-04-05 01:13:34,444 | INFO     | pid: 2612076
[2025-04-04 21:13:53] 2025-04-05 01:13:34,445 | INFO     | pgrp: 2612076
[2025-04-04 21:13:53] 2025-04-05 01:13:34,445 | INFO     | corecount: 8
[2025-04-04 21:13:53] 2025-04-05 01:13:34,445 | INFO     | event service: False
[2025-04-04 21:13:53] 2025-04-05 01:13:34,445 | INFO     | sizes: {0: 2417172, 2: 2417228, 5: 2417256, 6: 2417312, 8: 2417312, 9: 2417511, 11: 2417667, 25: 2417695, 37: 2417723, 50: 2417751, 62: 2417779, 68: 2418293, 74: 2
[2025-04-04 21:13:53] 2025-04-05 01:13:34,445 | INFO     | --------------------------------------------------
[2025-04-04 21:13:53] 2025-04-05 01:13:34,446 | INFO     | 
[2025-04-04 21:13:53] 2025-04-05 01:13:34,446 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-04 21:13:53] 2025-04-05 01:13:34,549 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,550 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,550 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,552 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,552 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,553 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,553 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,553 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,553 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 21:13:53] 2025-04-05 01:13:34,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,554 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 21:13:53] 2025-04-05 01:13:34,554 | INFO     | job 6586399870 has completed (purged errors)
[2025-04-04 21:13:53] 2025-04-05 01:13:34,555 | INFO     | overall cleanup function is called
[2025-04-04 21:13:53] 2025-04-05 01:13:35,568 | INFO     | --- collectZombieJob: --- 10, [2612076]
[2025-04-04 21:13:53] 2025-04-05 01:13:35,568 | INFO     | zombie collector waiting for pid 2612076
[2025-04-04 21:13:53] 2025-04-05 01:13:35,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 21:13:53] 2025-04-05 01:13:35,569 | INFO     | collected zombie processes
[2025-04-04 21:13:53] 2025-04-05 01:13:35,569 | INFO     | will attempt to kill all subprocesses of pid=2612076
[2025-04-04 21:13:53] 2025-04-05 01:13:37,006 | INFO     | process IDs to be killed: [2612076] (in reverse order)
[2025-04-04 21:13:53] 2025-04-05 01:13:37,474 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 21:13:53] 2025-04-05 01:13:37,475 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 21:13:53] 2025-04-05 01:13:37,534 | INFO     | did not find any defunct processes belonging to 2612076
[2025-04-04 21:13:53] 2025-04-05 01:13:37,637 | INFO     | did not find any defunct processes belonging to 2612076
[2025-04-04 21:13:53] 2025-04-05 01:13:37,638 | INFO     | ready for new job
[2025-04-04 21:13:53] 2025-04-05 01:13:37,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 21:13:53] 2025-04-05 01:13:37,654 | INFO     | **************************************
[2025-04-04 21:13:53] 2025-04-05 01:13:37,660 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 21:13:53] 2025-04-05 01:13:37,660 | INFO     | **************************************
[2025-04-04 21:13:53] 2025-04-05 01:13:37,660 | INFO     | 
[2025-04-04 21:13:53] 2025-04-05 01:13:37,702 | INFO     | architecture information:
[2025-04-04 21:13:53] 2025-04-05 01:13:37,707 | INFO     | executing command: cat /etc/os-release
[2025-04-04 21:13:53] 2025-04-05 01:13:37,862 | INFO     | cat /etc/os-release:
[2025-04-04 21:13:53] NAME="CentOS Linux"
[2025-04-04 21:13:53] VERSION="7 (Core)"
[2025-04-04 21:13:53] ID="centos"
[2025-04-04 21:13:53] ID_LIKE="rhel fedora"
[2025-04-04 21:13:53] VERSION_ID="7"
[2025-04-04 21:13:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 21:13:53] ANSI_COLOR="0;31"
[2025-04-04 21:13:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 21:13:53] HOME_URL="https://www.centos.org/"
[2025-04-04 21:13:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 21:13:53] 
[2025-04-04 21:13:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 21:13:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 21:13:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 21:13:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 21:13:53] 
[2025-04-04 21:13:53] 2025-04-05 01:13:37,863 | INFO     | **************************************
[2025-04-04 21:13:53] 2025-04-05 01:13:38,367 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-04 21:13:53] 2025-04-05 01:13:38,586 | INFO     | sufficient remaining disk space (75182899200 B)
[2025-04-04 21:13:53] 2025-04-05 01:13:38,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 21:13:53] 2025-04-05 01:13:38,587 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 21:13:53] 2025-04-05 01:13:38,587 | INFO     | update_server=False
[2025-04-04 21:13:53] 2025-04-05 01:13:38,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 21:13:53] 2025-04-05 01:13:38,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 21:13:53] 2025-04-05 01:13:38,588 | INFO     | aborting loop
[2025-04-04 21:13:53] 2025-04-05 01:13:38,605 | INFO     | all data control threads have been joined
[2025-04-04 21:13:53] 2025-04-05 01:13:39,003 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 21:13:53] 2025-04-05 01:13:39,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 21:13:53] 2025-04-05 01:13:39,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 21:13:53] 2025-04-05 01:13:39,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 21:13:53] 2025-04-05 01:13:39,042 | INFO     | all payload control threads have been joined
[2025-04-04 21:13:53] 2025-04-05 01:13:39,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 21:13:53] 2025-04-05 01:13:39,449 | INFO     | all job control threads have been joined
[2025-04-04 21:13:53] 2025-04-05 01:13:39,594 | INFO     | [job] retrieve thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:39,595 | INFO     | [job] job monitor thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:39,611 | INFO     | [data] control thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:39,909 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:39,929 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:40,049 | INFO     | [payload] control thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:40,086 | INFO     | [payload] failed_post thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:40,119 | INFO     | [job] validate thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:40,243 | INFO     | [payload] validate_post thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:40,268 | INFO     | [data] copytool_in thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:40,363 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:40,451 | INFO     | [job] queue monitor thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:40,469 | INFO     | [job] control thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:40,949 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:41,042 | INFO     | [data] copytool_out thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:42,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 21:13:53] 2025-04-05 01:13:46,041 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 21:13:53] 2025-04-05 01:13:47,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393579779904)>', '<ExcThread(monitor, started 140392934659840)>']
[2025-04-04 21:13:53] 2025-04-05 01:13:48,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 21:13:53] 2025-04-05 01:13:48,075 | INFO     | [monitor] control thread has ended
[2025-04-04 21:13:53] 2025-04-05 01:13:52,569 | INFO     | all workflow threads have been joined
[2025-04-04 21:13:53] 2025-04-05 01:13:52,569 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 21:13:53] 2025-04-05 01:13:52,570 | INFO     | traces error code: 0
[2025-04-04 21:13:53] 2025-04-05 01:13:52,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 21:13:53] 2025-04-05 01:13:52,919 [wrapper] ==== pilot stdout END ====
[2025-04-04 21:13:53] 2025-04-05 01:13:52,924 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 21:13:53] 2025-04-05 01:13:52,929 [wrapper] pilotpid: 2593203
[2025-04-04 21:13:53] 2025-04-05 01:13:52,934 [wrapper] Pilot exit status: 0
[2025-04-04 21:13:53] 2025-04-05 01:13:52,958 [wrapper] pandaids: 6586399870
[2025-04-04 21:13:53] 2025-04-05 01:13:53,158 [wrapper] cleanup supervisor_pilot 2442883 2593204
[2025-04-04 21:13:53] 2025-04-05 01:13:53,166 [wrapper] Test setup, not cleaning
[2025-04-04 21:13:53] 2025-04-05 01:13:53,173 [wrapper] apfmon messages muted
[2025-04-04 21:13:53] 2025-04-05 01:13:53,178 [wrapper] ==== wrapper stdout END ====
[2025-04-04 21:13:53] 2025-04-05 01:13:53,183 [wrapper] ==== wrapper stderr END ====
[2025-04-04 21:13:53]  *** Error codes and diagnostics ***
[2025-04-04 21:13:53]     "exeErrorCode": 0,
[2025-04-04 21:13:53]     "exeErrorDiag": "",
[2025-04-04 21:13:53]     "pilotErrorCode": 0,
[2025-04-04 21:13:53]     "pilotErrorDiag": "",
[2025-04-04 21:13:53]  *** Listing of results directory ***
[2025-04-04 21:13:53] total 677892
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 21:13 queuedata.json
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 21:13 pilot3.tar.gz
[2025-04-04 21:13:53] -rwx------. 1 boincer umatlas     37140 Apr  3 21:14 runpilot2-wrapper.sh
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas       100 Apr  4 01:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 21:13:53] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 01:31 run_atlas
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas       105 Apr  4 01:31 job.xml
[2025-04-04 21:13:53] -rw-r--r--. 2 boincer umatlas 359299835 Apr  4 01:31 EVNT.43634896._000725.pool.root.1
[2025-04-04 21:13:53] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 01:31 start_atlas.sh
[2025-04-04 21:13:53] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 01:31 shared
[2025-04-04 21:13:53] -rw-r--r--. 2 boincer umatlas    508887 Apr  4 01:31 input.tar.gz
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas         0 Apr  4 01:31 boinc_lockfile
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas      2599 Apr  4 01:32 pandaJob.out
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas       467 Apr  4 01:32 setup.sh.local
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas    979986 Apr  4 01:33 agis_schedconf.cvmfs.json
[2025-04-04 21:13:53] drwx------. 4 boincer umatlas      4096 Apr  4 01:33 pilot3
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas 320838692 Apr  4 21:08 HITS.43634898._019516.pool.root.1
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas       533 Apr  4 21:08 boinc_task_state.xml
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas      1053 Apr  4 21:12 memory_monitor_summary.json
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas   1603525 Apr  4 21:13 agis_ddmendpoints.agis.ALL.json
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas    824065 Apr  4 21:13 log.43634898._019516.job.log.tgz.1
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas      6857 Apr  4 21:13 init_data.xml
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 21:13 boinc_mmap_file
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas        29 Apr  4 21:13 wrapper_checkpoint.txt
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas      7743 Apr  4 21:13 heartbeat.json
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas        95 Apr  4 21:13 pilot_heartbeat.json
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas      4353 Apr  4 21:13 pilotlog.txt
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas   4264287 Apr  4 21:13 log.43634898._019516.job.log.1
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas       357 Apr  4 21:13 output.list
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas       620 Apr  4 21:13 runtime_log
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas   5109760 Apr  4 21:13 result.tar.gz
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas     11429 Apr  4 21:13 runtime_log.err
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas       666 Apr  4 21:13 CrHNDmzokK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmLOILDm60hXdm.diag
[2025-04-04 21:13:53] -rw-r--r--. 1 boincer umatlas     21283 Apr  4 21:13 stderr.txt
[2025-04-04 21:13:53] HITS file was successfully produced:
[2025-04-04 21:13:53] -rw-------. 1 boincer umatlas 320838692 Apr  4 21:08 shared/HITS.pool.root.1
[2025-04-04 21:13:54]  *** Contents of shared directory: ***
[2025-04-04 21:13:54] total 669720
[2025-04-04 21:13:54] -rw-r--r--. 2 boincer umatlas 359299835 Apr  4 01:31 ATLAS.root_0
[2025-04-04 21:13:54] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 01:31 start_atlas.sh
[2025-04-04 21:13:54] -rw-r--r--. 2 boincer umatlas    508887 Apr  4 01:31 input.tar.gz
[2025-04-04 21:13:54] -rw-------. 1 boincer umatlas 320838692 Apr  4 21:08 HITS.pool.root.1
[2025-04-04 21:13:54] -rw-------. 1 boincer umatlas   5109760 Apr  4 21:13 result.tar.gz
21:13:55 (2585104): run_atlas exited; CPU time 210508.451749
21:13:55 (2585104): called boinc_finish(0)

</stderr_txt>
]]>

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