Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:13:50 (3843064): wrapper (7.7.26015): starting
01:13:50 (3843064): wrapper: running run_atlas (--nthreads 12)
[2025-04-06 01:13:50] Arguments: --nthreads 12
[2025-04-06 01:13:50] Threads: 12
[2025-04-06 01:13:50] Checking for CVMFS
[2025-04-06 01:13:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-06 01:13:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-06 01:13:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-06 01:13:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-06 01:13:51] 2.12.7.0 3477254 1115 62932 144545 0 56 2364800 4096001 0 130560 0 990175 99.991 283991 1878 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-06 01:13:51] CVMFS is ok
[2025-04-06 01:13:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-06 01:13:51] Checking for apptainer binary...
[2025-04-06 01:13:51] apptainer is not installed, using version from CVMFS
[2025-04-06 01:13:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-06 01:13:51] ryzen7
[2025-04-06 01:13:51] apptainer works
[2025-04-06 01:13:51] Set ATHENA_PROC_NUMBER=12
[2025-04-06 01:13:51] Set ATHENA_CORE_NUMBER=12
[2025-04-06 01:13:51] Starting ATLAS job with PandaID=6586399829
[2025-04-06 01:13:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-06 02:34:32]  *** The last 200 lines of the pilot log: ***
[2025-04-06 02:34:32]  is_tar=False
[2025-04-06 02:34:32]  lfn=log.43634898._019475.job.log.tgz.1
[2025-04-06 02:34:32]  mtime=0
[2025-04-06 02:34:32]  protocol_id=None
[2025-04-06 02:34:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-06 02:34:32]  replicas=None
[2025-04-06 02:34:32]  scope=mc23_13p6TeV
[2025-04-06 02:34:32]  status=None
[2025-04-06 02:34:32]  status_code=0
[2025-04-06 02:34:32]  storage_token=
[2025-04-06 02:34:32]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586399829/log.43634898._019475.job.log.tgz.1
[2025-04-06 02:34:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/cc/log.43634898._019475.job.log.tgz.1
[2025-04-06 02:34:32]  workdir=None
[2025-04-06 02:34:32] ]
[2025-04-06 02:34:32] 2025-04-06 02:34:03,865 | INFO     | transferring file log.43634898._019475.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586399829/log.43634898._019475.job.log.tgz.1 t
[2025-04-06 02:34:32] 2025-04-06 02:34:03,865 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586399829/log.43634898._019475.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-06 02:34:32] 2025-04-06 02:34:03,874 | INFO     | adding to output.list: log.43634898._019475.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/cc/log.43634898._019475.job.log.tg
[2025-04-06 02:34:32] 2025-04-06 02:34:03,875 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-06 02:34:32] 2025-04-06 02:34:03,875 | INFO     | summary of transferred files:
[2025-04-06 02:34:32] 2025-04-06 02:34:03,875 | INFO     |  -- lfn=log.43634898._019475.job.log.tgz.1, status_code=0, status=transferred
[2025-04-06 02:34:32] 2025-04-06 02:34:03,875 | INFO     | stage-out finished correctly
[2025-04-06 02:34:32] 2025-04-06 02:34:05,227 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-06 02:34:32] 2025-04-06 02:34:05,286 | INFO     | job 6586399829 has state=finished
[2025-04-06 02:34:32] 2025-04-06 02:34:05,286 | INFO     | preparing for final server update for job 6586399829 in state='finished'
[2025-04-06 02:34:32] 2025-04-06 02:34:05,286 | INFO     | this job has now completed (state=finished)
[2025-04-06 02:34:32] 2025-04-06 02:34:05,286 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-06 02:34:32] 2025-04-06 02:34:05,286 | INFO     | log transfer has been attempted: DONE
[2025-04-06 02:34:32] 2025-04-06 02:34:05,286 | INFO     | job 6586399829 has finished - writing final server update
[2025-04-06 02:34:32] 2025-04-06 02:34:05,286 | INFO     | total number of processed events: 400 (read)
[2025-04-06 02:34:32] 2025-04-06 02:34:05,307 | INFO     | executing command: lscpu
[2025-04-06 02:34:32] 2025-04-06 02:34:05,323 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-06 02:34:32] 2025-04-06 02:34:10,021 | WARNING  | process 3853306 can no longer be monitored (due to stat problems) - aborting
[2025-04-06 02:34:32] 2025-04-06 02:34:10,022 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586399829/memory_monitor_summary.json (trf name=prmon)
[2025-04-06 02:34:32] 2025-04-06 02:34:10,093 | INFO     | number of running child processes to parent process 3853306: 1
[2025-04-06 02:34:32] 2025-04-06 02:34:10,094 | INFO     | maximum number of monitored processes: 6
[2025-04-06 02:34:32] 2025-04-06 02:34:12,602 | INFO     | monitor loop #359: job 0:6586399829 is in state 'finished'
[2025-04-06 02:34:32] 2025-04-06 02:34:12,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-06 02:34:32] 2025-04-06 02:34:13,145 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-06 02:34:32] 2025-04-06 02:34:13,145 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586399829/memory_monitor_summary.json (trf name=prmon)
[2025-04-06 02:34:32] 2025-04-06 02:34:13,145 | INFO     | extracted standard info from prmon json
[2025-04-06 02:34:32] 2025-04-06 02:34:13,145 | INFO     | extracted standard memory fields from prmon json
[2025-04-06 02:34:32] 2025-04-06 02:34:13,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-06 02:34:32] 2025-04-06 02:34:13,145 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-06 02:34:32] 2025-04-06 02:34:13,145 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-06 02:34:32] 2025-04-06 02:34:13,146 | INFO     | fitting pss+swap vs Time
[2025-04-06 02:34:32] 2025-04-06 02:34:13,147 | INFO     | sum of square deviations: 115715658.0
[2025-04-06 02:34:32] 2025-04-06 02:34:13,147 | INFO     | sum of deviations: 8969917111.499998
[2025-04-06 02:34:32] 2025-04-06 02:34:13,147 | INFO     | mean x: 1743904539.5
[2025-04-06 02:34:32] 2025-04-06 02:34:13,147 | INFO     | mean y: 2927781.4583333335
[2025-04-06 02:34:32] 2025-04-06 02:34:13,147 | INFO     | -- intersect: -135179116205.04845
[2025-04-06 02:34:32] 2025-04-06 02:34:13,147 | INFO     | intersect: -135179116205.04845
[2025-04-06 02:34:32] 2025-04-06 02:34:13,147 | INFO     | chi2: 1.870554808255747
[2025-04-06 02:34:32] 2025-04-06 02:34:13,147 | INFO     | -- intersect: -135179116205.04845
[2025-04-06 02:34:32] 2025-04-06 02:34:13,147 | INFO     | current memory leak: 77.52 B/s (using 72 data points, chi2=1.87)
[2025-04-06 02:34:32] 2025-04-06 02:34:13,148 | INFO     | ..............................
[2025-04-06 02:34:32] 2025-04-06 02:34:13,148 | INFO     | . Timing measurements:
[2025-04-06 02:34:32] 2025-04-06 02:34:13,148 | INFO     | . get job = 0 s
[2025-04-06 02:34:32] 2025-04-06 02:34:13,148 | INFO     | . initial setup = 1 s
[2025-04-06 02:34:32] 2025-04-06 02:34:13,148 | INFO     | . payload setup = 5 s
[2025-04-06 02:34:32] 2025-04-06 02:34:13,148 | INFO     | . stage-in = 0 s
[2025-04-06 02:34:32] 2025-04-06 02:34:13,148 | INFO     | . payload execution = 4779 s
[2025-04-06 02:34:32] 2025-04-06 02:34:13,148 | INFO     | . stage-out = 0 s
[2025-04-06 02:34:32] 2025-04-06 02:34:13,148 | INFO     | . log creation = 0 s
[2025-04-06 02:34:32] 2025-04-06 02:34:13,148 | INFO     | ..............................
[2025-04-06 02:34:32] 2025-04-06 02:34:13,204 | INFO     | 
[2025-04-06 02:34:32] 2025-04-06 02:34:13,204 | INFO     | job summary report
[2025-04-06 02:34:32] 2025-04-06 02:34:13,204 | INFO     | --------------------------------------------------
[2025-04-06 02:34:32] 2025-04-06 02:34:13,204 | INFO     | PanDA job id: 6586399829
[2025-04-06 02:34:32] 2025-04-06 02:34:13,204 | INFO     | task id: 43634898
[2025-04-06 02:34:32] 2025-04-06 02:34:13,204 | INFO     | errors: (none)
[2025-04-06 02:34:32] 2025-04-06 02:34:13,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-06 02:34:32] 2025-04-06 02:34:13,204 | INFO     | pilot state: finished 
[2025-04-06 02:34:32] 2025-04-06 02:34:13,204 | INFO     | transexitcode: 0
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | exeerrorcode: 0
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | exeerrordiag: 
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | exitcode: 0
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | exitmsg: OK
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | cpuconsumptiontime: 43182 s
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | nevents: 400
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | neventsw: 0
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | pid: 3853306
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | pgrp: 3853306
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | corecount: 12
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | event service: False
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | sizes: {0: 2417422, 4: 2417628, 10: 2417656, 4787: 2443709, 4788: 2452696, 4789: 2452752, 4797: 2453050}
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | --------------------------------------------------
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | 
[2025-04-06 02:34:32] 2025-04-06 02:34:13,205 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,216 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,217 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,217 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,217 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,217 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,217 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,217 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-06 02:34:32] 2025-04-06 02:34:13,217 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,217 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-06 02:34:32] 2025-04-06 02:34:13,217 | INFO     | job 6586399829 has completed (purged errors)
[2025-04-06 02:34:32] 2025-04-06 02:34:13,217 | INFO     | overall cleanup function is called
[2025-04-06 02:34:32] 2025-04-06 02:34:14,222 | INFO     | --- collectZombieJob: --- 10, [3853306]
[2025-04-06 02:34:32] 2025-04-06 02:34:14,222 | INFO     | zombie collector waiting for pid 3853306
[2025-04-06 02:34:32] 2025-04-06 02:34:14,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-06 02:34:32] 2025-04-06 02:34:14,222 | INFO     | collected zombie processes
[2025-04-06 02:34:32] 2025-04-06 02:34:14,222 | INFO     | will attempt to kill all subprocesses of pid=3853306
[2025-04-06 02:34:32] 2025-04-06 02:34:14,307 | INFO     | process IDs to be killed: [3853306] (in reverse order)
[2025-04-06 02:34:32] 2025-04-06 02:34:14,341 | WARNING  | found no corresponding commands to process id(s)
[2025-04-06 02:34:32] 2025-04-06 02:34:14,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-06 02:34:32] 2025-04-06 02:34:14,343 | INFO     | did not find any defunct processes belonging to 3853306
[2025-04-06 02:34:32] 2025-04-06 02:34:14,345 | INFO     | did not find any defunct processes belonging to 3853306
[2025-04-06 02:34:32] 2025-04-06 02:34:14,345 | INFO     | ready for new job
[2025-04-06 02:34:32] 2025-04-06 02:34:14,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-06 02:34:32] 2025-04-06 02:34:14,346 | INFO     | **************************************
[2025-04-06 02:34:32] 2025-04-06 02:34:14,346 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-06 02:34:32] 2025-04-06 02:34:14,346 | INFO     | **************************************
[2025-04-06 02:34:32] 2025-04-06 02:34:14,346 | INFO     | 
[2025-04-06 02:34:32] 2025-04-06 02:34:14,366 | INFO     | architecture information:
[2025-04-06 02:34:32] 2025-04-06 02:34:14,367 | INFO     | executing command: cat /etc/os-release
[2025-04-06 02:34:32] 2025-04-06 02:34:14,374 | INFO     | cat /etc/os-release:
[2025-04-06 02:34:32] NAME="CentOS Linux"
[2025-04-06 02:34:32] VERSION="7 (Core)"
[2025-04-06 02:34:32] ID="centos"
[2025-04-06 02:34:32] ID_LIKE="rhel fedora"
[2025-04-06 02:34:32] VERSION_ID="7"
[2025-04-06 02:34:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-06 02:34:32] ANSI_COLOR="0;31"
[2025-04-06 02:34:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-06 02:34:32] HOME_URL="https://www.centos.org/"
[2025-04-06 02:34:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-06 02:34:32] 
[2025-04-06 02:34:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-06 02:34:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-06 02:34:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-06 02:34:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-06 02:34:32] 
[2025-04-06 02:34:32] 2025-04-06 02:34:14,374 | INFO     | **************************************
[2025-04-06 02:34:32] 2025-04-06 02:34:14,874 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 02:34:32] 2025-04-06 02:34:14,882 | INFO     | sufficient remaining disk space (175300935680 B)
[2025-04-06 02:34:32] 2025-04-06 02:34:14,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-06 02:34:32] 2025-04-06 02:34:14,882 | INFO     | current server update state: UPDATING_FINAL
[2025-04-06 02:34:32] 2025-04-06 02:34:14,883 | INFO     | update_server=False
[2025-04-06 02:34:32] 2025-04-06 02:34:14,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-06 02:34:32] 2025-04-06 02:34:14,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-06 02:34:32] 2025-04-06 02:34:14,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-06 02:34:32] 2025-04-06 02:34:14,883 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-06 02:34:32] 2025-04-06 02:34:14,883 | INFO     | found 0 job(s) in 20 queues
[2025-04-06 02:34:32] 2025-04-06 02:34:14,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-06 02:34:32] 2025-04-06 02:34:14,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-06 02:34:32] 2025-04-06 02:34:14,926 | INFO     | all payload control threads have been joined
[2025-04-06 02:34:32] 2025-04-06 02:34:15,105 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-06 02:34:32] 2025-04-06 02:34:15,105 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-06 02:34:32] 2025-04-06 02:34:15,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-06 02:34:32] 2025-04-06 02:34:15,105 | INFO     | will abort loop
[2025-04-06 02:34:32] 2025-04-06 02:34:15,306 | INFO     | all data control threads have been joined
[2025-04-06 02:34:32] 2025-04-06 02:34:15,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-06 02:34:32] 2025-04-06 02:34:15,886 | INFO     | [job] retrieve thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:15,886 | INFO     | [job] queue monitor thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:15,930 | INFO     | [payload] control thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:16,110 | INFO     | [job] job monitor thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:16,170 | INFO     | [payload] execute_payloads thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:16,271 | INFO     | [payload] failed_post thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:16,282 | INFO     | all job control threads have been joined
[2025-04-06 02:34:32] 2025-04-06 02:34:16,310 | INFO     | [data] control thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:16,322 | INFO     | [job] validate thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:16,882 | INFO     | [job] create_data_payload thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:16,886 | INFO     | [data] copytool_out thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:17,074 | INFO     | [data] copytool_in thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:17,190 | INFO     | [payload] validate_post thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:17,286 | INFO     | [job] control thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:17,330 | INFO     | [payload] validate_pre thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:19,798 | INFO     | [data] queue_monitor thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:25,454 | INFO     | job.realtimelogging is not enabled
[2025-04-06 02:34:32] 2025-04-06 02:34:26,458 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-06 02:34:32] 2025-04-06 02:34:27,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055933417280)>', '<ExcThread(monitor, started 140055117031168)>']
[2025-04-06 02:34:32] 2025-04-06 02:34:27,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-06 02:34:32] 2025-04-06 02:34:27,934 | INFO     | [monitor] control thread has ended
[2025-04-06 02:34:32] 2025-04-06 02:34:32,542 | INFO     | all workflow threads have been joined
[2025-04-06 02:34:32] 2025-04-06 02:34:32,542 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-06 02:34:32] 2025-04-06 02:34:32,542 | INFO     | traces error code: 0
[2025-04-06 02:34:32] 2025-04-06 02:34:32,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-06 02:34:32] 2025-04-06 02:34:32,593 [wrapper] ==== pilot stdout END ====
[2025-04-06 02:34:32] 2025-04-06 02:34:32,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-06 02:34:32] 2025-04-06 02:34:32,599 [wrapper] pilotpid: 3846776
[2025-04-06 02:34:32] 2025-04-06 02:34:32,603 [wrapper] Pilot exit status: 0
[2025-04-06 02:34:32] 2025-04-06 02:34:32,620 [wrapper] pandaids: 6586399829
[2025-04-06 02:34:32] 2025-04-06 02:34:32,638 [wrapper] cleanup supervisor_pilot 3865143 3846777
[2025-04-06 02:34:32] 2025-04-06 02:34:32,640 [wrapper] Test setup, not cleaning
[2025-04-06 02:34:32] 2025-04-06 02:34:32,651 [wrapper] apfmon messages muted
[2025-04-06 02:34:32] 2025-04-06 02:34:32,654 [wrapper] ==== wrapper stdout END ====
[2025-04-06 02:34:32] 2025-04-06 02:34:32,656 [wrapper] ==== wrapper stderr END ====
[2025-04-06 02:34:32]  *** Error codes and diagnostics ***
[2025-04-06 02:34:32]     "exeErrorCode": 0,
[2025-04-06 02:34:32]     "exeErrorDiag": "",
[2025-04-06 02:34:32]     "pilotErrorCode": 0,
[2025-04-06 02:34:32]     "pilotErrorDiag": "",
[2025-04-06 02:34:32]  *** Listing of results directory ***
[2025-04-06 02:34:32] total 672496
[2025-04-06 02:34:32] -rw-r--r-- 1 boinc boinc    495897 Apr  4 00:41 pilot3.tar.gz
[2025-04-06 02:34:32] -rw-r--r-- 1 boinc boinc      5111 Apr  4 01:10 queuedata.json
[2025-04-06 02:34:32] -rwx------ 1 boinc boinc     37140 Apr  4 01:10 runpilot2-wrapper.sh
[2025-04-06 02:34:32] -rw-rw-r-- 1 boinc boinc       100 Apr  6 01:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-06 02:34:32] -rwxr-xr-x 1 boinc boinc      7986 Apr  6 01:13 run_atlas
[2025-04-06 02:34:32] -rw-rw-r-- 1 boinc boinc       105 Apr  6 01:13 job.xml
[2025-04-06 02:34:32] -rw-r--r-- 2 boinc boinc     17569 Apr  6 01:13 start_atlas.sh
[2025-04-06 02:34:32] drwxrwx--x 2 boinc boinc      4096 Apr  6 01:13 shared
[2025-04-06 02:34:32] -rw-r--r-- 2 boinc boinc    508893 Apr  6 01:13 input.tar.gz
[2025-04-06 02:34:32] -rw-rw-r-- 1 boinc boinc      9677 Apr  6 01:13 init_data.xml
[2025-04-06 02:34:32] -rw-r--r-- 2 boinc boinc 362079363 Apr  6 01:13 EVNT.43634896._000724.pool.root.1
[2025-04-06 02:34:32] -rw-rw-r-- 1 boinc boinc         0 Apr  6 01:13 boinc_lockfile
[2025-04-06 02:34:32] -rw-rw-r-- 1 boinc boinc      2599 Apr  6 01:13 pandaJob.out
[2025-04-06 02:34:32] -rw------- 1 boinc boinc       424 Apr  6 01:13 setup.sh.local
[2025-04-06 02:34:32] -rw------- 1 boinc boinc    980067 Apr  6 01:13 agis_schedconf.cvmfs.json
[2025-04-06 02:34:32] -rw------- 1 boinc boinc   1603525 Apr  6 01:13 agis_ddmendpoints.agis.ALL.json
[2025-04-06 02:34:32] drwx------ 4 boinc boinc      4096 Apr  6 01:14 pilot3
[2025-04-06 02:34:32] -rw------- 1 boinc boinc 321040803 Apr  6 02:33 HITS.43634898._019475.pool.root.1
[2025-04-06 02:34:32] -rw-rw-r-- 1 boinc boinc       531 Apr  6 02:33 boinc_task_state.xml
[2025-04-06 02:34:32] -rw------- 1 boinc boinc        95 Apr  6 02:33 pilot_heartbeat.json
[2025-04-06 02:34:32] -rw------- 1 boinc boinc      1015 Apr  6 02:34 memory_monitor_summary.json
[2025-04-06 02:34:32] -rw------- 1 boinc boinc    357512 Apr  6 02:34 log.43634898._019475.job.log.tgz.1
[2025-04-06 02:34:32] -rw------- 1 boinc boinc      7650 Apr  6 02:34 heartbeat.json
[2025-04-06 02:34:32] -rw-rw-r-- 1 boinc boinc      8192 Apr  6 02:34 boinc_mmap_file
[2025-04-06 02:34:32] -rw-rw-r-- 1 boinc boinc        27 Apr  6 02:34 wrapper_checkpoint.txt
[2025-04-06 02:34:32] -rw------- 1 boinc boinc      4758 Apr  6 02:34 pilotlog.txt
[2025-04-06 02:34:32] -rw------- 1 boinc boinc    477176 Apr  6 02:34 log.43634898._019475.job.log.1
[2025-04-06 02:34:32] -rw------- 1 boinc boinc       357 Apr  6 02:34 output.list
[2025-04-06 02:34:32] -rw-rw-r-- 1 boinc boinc       620 Apr  6 02:34 runtime_log
[2025-04-06 02:34:32] -rw------- 1 boinc boinc    849920 Apr  6 02:34 result.tar.gz
[2025-04-06 02:34:32] -rw-rw-r-- 1 boinc boinc     11399 Apr  6 02:34 runtime_log.err
[2025-04-06 02:34:32] -rw------- 1 boinc boinc       649 Apr  6 02:34 n72MDm5kkK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm3NILDmamiFIm.diag
[2025-04-06 02:34:32] -rw-rw-r-- 1 boinc boinc     21318 Apr  6 02:34 stderr.txt
[2025-04-06 02:34:32] HITS file was successfully produced:
[2025-04-06 02:34:32] -rw------- 1 boinc boinc 321040803 Apr  6 02:33 shared/HITS.pool.root.1
[2025-04-06 02:34:32]  *** Contents of shared directory: ***
[2025-04-06 02:34:32] total 668476
[2025-04-06 02:34:32] -rw-r--r-- 2 boinc boinc     17569 Apr  6 01:13 start_atlas.sh
[2025-04-06 02:34:32] -rw-r--r-- 2 boinc boinc    508893 Apr  6 01:13 input.tar.gz
[2025-04-06 02:34:32] -rw-r--r-- 2 boinc boinc 362079363 Apr  6 01:13 ATLAS.root_0
[2025-04-06 02:34:32] -rw------- 1 boinc boinc 321040803 Apr  6 02:33 HITS.pool.root.1
[2025-04-06 02:34:32] -rw------- 1 boinc boinc    849920 Apr  6 02:34 result.tar.gz
02:34:34 (3843064): run_atlas exited; CPU time 43210.936201
02:34:34 (3843064): called boinc_finish(0)

</stderr_txt>
]]>

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