Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:54:16 (3892793): wrapper (7.7.26015): starting
03:54:16 (3892793): wrapper: running run_atlas (--nthreads 12)
[2025-04-06 03:54:16] Arguments: --nthreads 12
[2025-04-06 03:54:16] Threads: 12
[2025-04-06 03:54:16] Checking for CVMFS
[2025-04-06 03:54:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-06 03:54:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-06 03:54:16] Running cvmfs_config stat atlas.cern.ch
[2025-04-06 03:54:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-06 03:54:17] 2.12.7.0 3477254 1275 63492 144550 0 56 2546784 4096000 0 130560 0 1119315 99.991 353050 2122 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-06 03:54:17] CVMFS is ok
[2025-04-06 03:54:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-06 03:54:17] Checking for apptainer binary...
[2025-04-06 03:54:17] apptainer is not installed, using version from CVMFS
[2025-04-06 03:54:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-06 03:54:17] ryzen7
[2025-04-06 03:54:17] apptainer works
[2025-04-06 03:54:17] Set ATHENA_PROC_NUMBER=12
[2025-04-06 03:54:17] Set ATHENA_CORE_NUMBER=12
[2025-04-06 03:54:17] Starting ATLAS job with PandaID=6581216829
[2025-04-06 03:54:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-06 05:10:02]  *** The last 200 lines of the pilot log: ***
[2025-04-06 05:10:02]  filetype=log
[2025-04-06 05:10:02]  guid=d7363eaa-1ffd-43a4-8d67-963b13990c5d
[2025-04-06 05:10:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-06 05:10:02]  is_altstaged=None
[2025-04-06 05:10:02]  is_tar=False
[2025-04-06 05:10:02]  lfn=log.43634882._002299.job.log.tgz.1
[2025-04-06 05:10:02]  mtime=0
[2025-04-06 05:10:02]  protocol_id=None
[2025-04-06 05:10:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-06 05:10:02]  replicas=None
[2025-04-06 05:10:02]  scope=mc23_13p6TeV
[2025-04-06 05:10:02]  status=None
[2025-04-06 05:10:02]  status_code=0
[2025-04-06 05:10:02]  storage_token=
[2025-04-06 05:10:02]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6581216829/log.43634882._002299.job.log.tgz.1
[2025-04-06 05:10:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/9c/log.43634882._002299.job.log.tgz.1
[2025-04-06 05:10:02]  workdir=None
[2025-04-06 05:10:02] ]
[2025-04-06 05:10:02] 2025-04-06 05:09:34,574 | INFO     | transferring file log.43634882._002299.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6581216829/log.43634882._002299.job.log.tgz.1 t
[2025-04-06 05:10:02] 2025-04-06 05:09:34,575 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6581216829/log.43634882._002299.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-06 05:10:02] 2025-04-06 05:09:34,583 | INFO     | adding to output.list: log.43634882._002299.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/9c/log.43634882._002299.job.log.tg
[2025-04-06 05:10:02] 2025-04-06 05:09:34,584 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-06 05:10:02] 2025-04-06 05:09:34,584 | INFO     | summary of transferred files:
[2025-04-06 05:10:02] 2025-04-06 05:09:34,584 | INFO     |  -- lfn=log.43634882._002299.job.log.tgz.1, status_code=0, status=transferred
[2025-04-06 05:10:02] 2025-04-06 05:09:34,584 | INFO     | stage-out finished correctly
[2025-04-06 05:10:02] 2025-04-06 05:09:36,206 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-06 05:10:02] 2025-04-06 05:09:36,264 | INFO     | job 6581216829 has state=finished
[2025-04-06 05:10:02] 2025-04-06 05:09:36,264 | INFO     | preparing for final server update for job 6581216829 in state='finished'
[2025-04-06 05:10:02] 2025-04-06 05:09:36,264 | INFO     | this job has now completed (state=finished)
[2025-04-06 05:10:02] 2025-04-06 05:09:36,264 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-06 05:10:02] 2025-04-06 05:09:36,265 | INFO     | log transfer has been attempted: DONE
[2025-04-06 05:10:02] 2025-04-06 05:09:36,265 | INFO     | job 6581216829 has finished - writing final server update
[2025-04-06 05:10:02] 2025-04-06 05:09:36,265 | INFO     | total number of processed events: 400 (read)
[2025-04-06 05:10:02] 2025-04-06 05:09:36,283 | INFO     | executing command: lscpu
[2025-04-06 05:10:02] 2025-04-06 05:09:36,303 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-06 05:10:02] 2025-04-06 05:09:41,000 | INFO     | PID=3896516 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-06 05:10:02] 2025-04-06 05:09:43,145 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-06 05:10:02] 2025-04-06 05:09:43,146 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6581216829/memory_monitor_summary.json (trf name=prmon)
[2025-04-06 05:10:02] 2025-04-06 05:09:43,149 | INFO     | extracted standard info from prmon json
[2025-04-06 05:10:02] 2025-04-06 05:09:43,149 | INFO     | extracted standard memory fields from prmon json
[2025-04-06 05:10:02] 2025-04-06 05:09:43,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-06 05:10:02] 2025-04-06 05:09:43,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-06 05:10:02] 2025-04-06 05:09:43,150 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-06 05:10:02] 2025-04-06 05:09:43,151 | INFO     | fitting pss+swap vs Time
[2025-04-06 05:10:02] 2025-04-06 05:09:43,151 | INFO     | model: linear, x: [1743912001.0, 1743912062.0, 1743912123.0, 1743912184.0, 1743912245.0, 1743912306.0, 1743912367.0, 1743912428.0, 1743912489.0, 1743912550.0, 1743
[2025-04-06 05:10:02] 2025-04-06 05:09:43,151 | INFO     | sum of square deviations: 93240818.0
[2025-04-06 05:10:02] 2025-04-06 05:09:43,152 | INFO     | sum of deviations: 11268983351.999998
[2025-04-06 05:10:02] 2025-04-06 05:09:43,152 | INFO     | mean x: 1743914014.0
[2025-04-06 05:10:02] 2025-04-06 05:09:43,152 | INFO     | mean y: 2732805.3582089553
[2025-04-06 05:10:02] 2025-04-06 05:09:43,152 | INFO     | -- intersect: -210764808842.39407
[2025-04-06 05:10:02] 2025-04-06 05:09:43,152 | INFO     | intersect: -210764808842.39407
[2025-04-06 05:10:02] 2025-04-06 05:09:43,152 | INFO     | chi2: 1.386157455453918
[2025-04-06 05:10:02] 2025-04-06 05:09:43,152 | INFO     | -- intersect: -210764808842.39407
[2025-04-06 05:10:02] 2025-04-06 05:09:43,152 | INFO     | current memory leak: 120.86 B/s (using 67 data points, chi2=1.39)
[2025-04-06 05:10:02] 2025-04-06 05:09:43,153 | INFO     | ..............................
[2025-04-06 05:10:02] 2025-04-06 05:09:43,153 | INFO     | . Timing measurements:
[2025-04-06 05:10:02] 2025-04-06 05:09:43,153 | INFO     | . get job = 0 s
[2025-04-06 05:10:02] 2025-04-06 05:09:43,153 | INFO     | . initial setup = 1 s
[2025-04-06 05:10:02] 2025-04-06 05:09:43,153 | INFO     | . payload setup = 5 s
[2025-04-06 05:10:02] 2025-04-06 05:09:43,153 | INFO     | . stage-in = 0 s
[2025-04-06 05:10:02] 2025-04-06 05:09:43,153 | INFO     | . payload execution = 4481 s
[2025-04-06 05:10:02] 2025-04-06 05:09:43,153 | INFO     | . stage-out = 0 s
[2025-04-06 05:10:02] 2025-04-06 05:09:43,153 | INFO     | . log creation = 0 s
[2025-04-06 05:10:02] 2025-04-06 05:09:43,153 | INFO     | ..............................
[2025-04-06 05:10:02] 2025-04-06 05:09:43,193 | WARNING  | process 3903049 can no longer be monitored (due to stat problems) - aborting
[2025-04-06 05:10:02] 2025-04-06 05:09:43,193 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6581216829/memory_monitor_summary.json (trf name=prmon)
[2025-04-06 05:10:02] 2025-04-06 05:09:43,222 | INFO     | 
[2025-04-06 05:10:02] 2025-04-06 05:09:43,222 | INFO     | job summary report
[2025-04-06 05:10:02] 2025-04-06 05:09:43,222 | INFO     | --------------------------------------------------
[2025-04-06 05:10:02] 2025-04-06 05:09:43,222 | INFO     | PanDA job id: 6581216829
[2025-04-06 05:10:02] 2025-04-06 05:09:43,222 | INFO     | task id: 43634882
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | errors: (none)
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | pilot state: finished 
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | transexitcode: 0
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | exeerrorcode: 0
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | exeerrordiag: 
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | exitcode: 0
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | exitmsg: OK
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | cpuconsumptiontime: 40966 s
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | nevents: 400
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | neventsw: 0
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | pid: 3903049
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | pgrp: 3903049
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | corecount: 12
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | event service: False
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | sizes: {0: 2417324, 1: 2417466, 5: 2417672, 11: 2417728, 4491: 2443833, 4492: 2453003, 4494: 2453003, 4501: 2453173}
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | --------------------------------------------------
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | 
[2025-04-06 05:10:02] 2025-04-06 05:09:43,223 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 05:10:02] 2025-04-06 05:09:43,236 | INFO     | number of running child processes to parent process 3903049: 1
[2025-04-06 05:10:02] 2025-04-06 05:09:43,236 | INFO     | maximum number of monitored processes: 6
[2025-04-06 05:10:02] 2025-04-06 05:09:43,236 | INFO     | aborting job monitoring since job object (job id=6581216829) has expired
[2025-04-06 05:10:02] 2025-04-06 05:09:43,238 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,238 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,238 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,238 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | job 6581216829 has completed (purged errors)
[2025-04-06 05:10:02] 2025-04-06 05:09:43,239 | INFO     | overall cleanup function is called
[2025-04-06 05:10:02] 2025-04-06 05:09:44,246 | INFO     | --- collectZombieJob: --- 10, [3903049]
[2025-04-06 05:10:02] 2025-04-06 05:09:44,246 | INFO     | zombie collector waiting for pid 3903049
[2025-04-06 05:10:02] 2025-04-06 05:09:44,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-06 05:10:02] 2025-04-06 05:09:44,246 | INFO     | collected zombie processes
[2025-04-06 05:10:02] 2025-04-06 05:09:44,246 | INFO     | will attempt to kill all subprocesses of pid=3903049
[2025-04-06 05:10:02] 2025-04-06 05:09:44,286 | INFO     | process IDs to be killed: [3903049] (in reverse order)
[2025-04-06 05:10:02] 2025-04-06 05:09:44,313 | WARNING  | found no corresponding commands to process id(s)
[2025-04-06 05:10:02] 2025-04-06 05:09:44,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-06 05:10:02] 2025-04-06 05:09:44,315 | INFO     | did not find any defunct processes belonging to 3903049
[2025-04-06 05:10:02] 2025-04-06 05:09:44,317 | INFO     | did not find any defunct processes belonging to 3903049
[2025-04-06 05:10:02] 2025-04-06 05:09:44,317 | INFO     | ready for new job
[2025-04-06 05:10:02] 2025-04-06 05:09:44,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-06 05:10:02] 2025-04-06 05:09:44,318 | INFO     | ***************************************
[2025-04-06 05:10:02] 2025-04-06 05:09:44,318 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-06 05:10:02] 2025-04-06 05:09:44,318 | INFO     | ***************************************
[2025-04-06 05:10:02] 2025-04-06 05:09:44,318 | INFO     | 
[2025-04-06 05:10:02] 2025-04-06 05:09:44,338 | INFO     | architecture information:
[2025-04-06 05:10:02] 2025-04-06 05:09:44,339 | INFO     | executing command: cat /etc/os-release
[2025-04-06 05:10:02] 2025-04-06 05:09:44,345 | INFO     | cat /etc/os-release:
[2025-04-06 05:10:02] NAME="CentOS Linux"
[2025-04-06 05:10:02] VERSION="7 (Core)"
[2025-04-06 05:10:02] ID="centos"
[2025-04-06 05:10:02] ID_LIKE="rhel fedora"
[2025-04-06 05:10:02] VERSION_ID="7"
[2025-04-06 05:10:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-06 05:10:02] ANSI_COLOR="0;31"
[2025-04-06 05:10:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-06 05:10:02] HOME_URL="https://www.centos.org/"
[2025-04-06 05:10:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-06 05:10:02] 
[2025-04-06 05:10:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-06 05:10:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-06 05:10:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-06 05:10:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-06 05:10:02] 
[2025-04-06 05:10:02] 2025-04-06 05:09:44,346 | INFO     | ***************************************
[2025-04-06 05:10:02] 2025-04-06 05:09:44,846 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-06 05:10:02] 2025-04-06 05:09:44,853 | INFO     | sufficient remaining disk space (175817883648 B)
[2025-04-06 05:10:02] 2025-04-06 05:09:44,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-06 05:10:02] 2025-04-06 05:09:44,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-06 05:10:02] 2025-04-06 05:09:44,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-06 05:10:02] 2025-04-06 05:09:44,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-06 05:10:02] 2025-04-06 05:09:44,854 | INFO     | aborting loop
[2025-04-06 05:10:02] 2025-04-06 05:09:45,010 | INFO     | found 0 job(s) in 20 queues
[2025-04-06 05:10:02] 2025-04-06 05:09:45,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-06 05:10:02] 2025-04-06 05:09:45,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-06 05:10:02] 2025-04-06 05:09:45,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-06 05:10:02] 2025-04-06 05:09:45,366 | INFO     | all payload control threads have been joined
[2025-04-06 05:10:02] 2025-04-06 05:09:45,390 | INFO     | all data control threads have been joined
[2025-04-06 05:10:02] 2025-04-06 05:09:45,858 | INFO     | [job] queue monitor thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:45,858 | INFO     | [job] retrieve thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:45,858 | INFO     | [job] job monitor thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:45,920 | INFO     | all job control threads have been joined
[2025-04-06 05:10:02] 2025-04-06 05:09:46,286 | INFO     | [payload] validate_post thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:46,370 | INFO     | [payload] control thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:46,394 | INFO     | [data] control thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:46,666 | INFO     | [payload] execute_payloads thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:46,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-06 05:10:02] 2025-04-06 05:09:46,822 | INFO     | [data] copytool_in thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:46,826 | INFO     | [job] validate thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:46,830 | INFO     | [job] create_data_payload thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:46,922 | INFO     | [job] control thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:47,166 | INFO     | [data] copytool_out thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:47,286 | INFO     | [payload] validate_pre thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:47,314 | INFO     | [payload] failed_post thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:50,778 | INFO     | [data] queue_monitor thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:55,770 | INFO     | job.realtimelogging is not enabled
[2025-04-06 05:10:02] 2025-04-06 05:09:56,774 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-06 05:10:02] 2025-04-06 05:09:56,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139676407547712)>', '<ExcThread(monitor, started 139675591227136)>']
[2025-04-06 05:10:02] 2025-04-06 05:09:57,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-06 05:10:02] 2025-04-06 05:09:57,058 | INFO     | [monitor] control thread has ended
[2025-04-06 05:10:02] 2025-04-06 05:10:01,954 | INFO     | all workflow threads have been joined
[2025-04-06 05:10:02] 2025-04-06 05:10:01,954 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-06 05:10:02] 2025-04-06 05:10:01,954 | INFO     | traces error code: 0
[2025-04-06 05:10:02] 2025-04-06 05:10:01,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-06 05:10:02] 2025-04-06 05:10:02,005 [wrapper] ==== pilot stdout END ====
[2025-04-06 05:10:02] 2025-04-06 05:10:02,007 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-06 05:10:02] 2025-04-06 05:10:02,009 [wrapper] pilotpid: 3896516
[2025-04-06 05:10:02] 2025-04-06 05:10:02,015 [wrapper] Pilot exit status: 0
[2025-04-06 05:10:02] 2025-04-06 05:10:02,032 [wrapper] pandaids: 6581216829
[2025-04-06 05:10:02] 2025-04-06 05:10:02,058 [wrapper] cleanup supervisor_pilot 3915489 3896517
[2025-04-06 05:10:02] 2025-04-06 05:10:02,060 [wrapper] Test setup, not cleaning
[2025-04-06 05:10:02] 2025-04-06 05:10:02,061 [wrapper] apfmon messages muted
[2025-04-06 05:10:02] 2025-04-06 05:10:02,063 [wrapper] ==== wrapper stdout END ====
[2025-04-06 05:10:02] 2025-04-06 05:10:02,064 [wrapper] ==== wrapper stderr END ====
[2025-04-06 05:10:02]  *** Error codes and diagnostics ***
[2025-04-06 05:10:02]     "exeErrorCode": 0,
[2025-04-06 05:10:02]     "exeErrorDiag": "",
[2025-04-06 05:10:02]     "pilotErrorCode": 0,
[2025-04-06 05:10:02]     "pilotErrorDiag": "",
[2025-04-06 05:10:02]  *** Listing of results directory ***
[2025-04-06 05:10:02] total 633328
[2025-04-06 05:10:02] -rwx------ 1 boinc boinc     37140 M&#195;&#164;r 31 11:28 runpilot2-wrapper.sh
[2025-04-06 05:10:02] -rw-r--r-- 1 boinc boinc      5112 M&#195;&#164;r 31 11:29 queuedata.json
[2025-04-06 05:10:02] -rw-r--r-- 1 boinc boinc    494584 M&#195;&#164;r 31 11:29 pilot3.tar.gz
[2025-04-06 05:10:02] -rw-rw-r-- 1 boinc boinc       100 Apr  6 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-06 05:10:02] -rwxr-xr-x 1 boinc boinc      7986 Apr  6 03:54 run_atlas
[2025-04-06 05:10:02] -rw-rw-r-- 1 boinc boinc       105 Apr  6 03:54 job.xml
[2025-04-06 05:10:02] -rw-r--r-- 2 boinc boinc     17571 Apr  6 03:54 start_atlas.sh
[2025-04-06 05:10:02] drwxrwx--x 2 boinc boinc      4096 Apr  6 03:54 shared
[2025-04-06 05:10:02] -rw-r--r-- 2 boinc boinc    507259 Apr  6 03:54 input.tar.gz
[2025-04-06 05:10:02] -rw-rw-r-- 1 boinc boinc      9677 Apr  6 03:54 init_data.xml
[2025-04-06 05:10:02] -rw-r--r-- 2 boinc boinc 343871310 Apr  6 03:54 EVNT.43634880._000569.pool.root.1
[2025-04-06 05:10:02] -rw-rw-r-- 1 boinc boinc         0 Apr  6 03:54 boinc_lockfile
[2025-04-06 05:10:02] -rw-rw-r-- 1 boinc boinc      2618 Apr  6 03:54 pandaJob.out
[2025-04-06 05:10:02] -rw------- 1 boinc boinc       424 Apr  6 03:54 setup.sh.local
[2025-04-06 05:10:02] -rw------- 1 boinc boinc    980067 Apr  6 03:54 agis_schedconf.cvmfs.json
[2025-04-06 05:10:02] -rw------- 1 boinc boinc   1603525 Apr  6 03:54 agis_ddmendpoints.agis.ALL.json
[2025-04-06 05:10:02] drwx------ 4 boinc boinc      4096 Apr  6 03:54 pilot3
[2025-04-06 05:10:02] -rw-rw-r-- 1 boinc boinc       530 Apr  6 05:08 boinc_task_state.xml
[2025-04-06 05:10:02] -rw------- 1 boinc boinc 299196531 Apr  6 05:09 HITS.43634882._002299.pool.root.1
[2025-04-06 05:10:02] -rw------- 1 boinc boinc        95 Apr  6 05:09 pilot_heartbeat.json
[2025-04-06 05:10:02] -rw------- 1 boinc boinc      1013 Apr  6 05:09 memory_monitor_summary.json
[2025-04-06 05:10:02] -rw------- 1 boinc boinc    367016 Apr  6 05:09 log.43634882._002299.job.log.tgz.1
[2025-04-06 05:10:02] -rw------- 1 boinc boinc      7648 Apr  6 05:09 heartbeat.json
[2025-04-06 05:10:02] -rw-rw-r-- 1 boinc boinc      8192 Apr  6 05:10 boinc_mmap_file
[2025-04-06 05:10:02] -rw-rw-r-- 1 boinc boinc        27 Apr  6 05:10 wrapper_checkpoint.txt
[2025-04-06 05:10:02] -rw------- 1 boinc boinc      4315 Apr  6 05:10 pilotlog.txt
[2025-04-06 05:10:02] -rw------- 1 boinc boinc    445688 Apr  6 05:10 log.43634882._002299.job.log.1
[2025-04-06 05:10:02] -rw------- 1 boinc boinc       357 Apr  6 05:10 output.list
[2025-04-06 05:10:02] -rw-rw-r-- 1 boinc boinc       620 Apr  6 05:10 runtime_log
[2025-04-06 05:10:02] -rw------- 1 boinc boinc    829440 Apr  6 05:10 result.tar.gz
[2025-04-06 05:10:02] -rw-rw-r-- 1 boinc boinc     11400 Apr  6 05:10 runtime_log.err
[2025-04-06 05:10:02] -rw------- 1 boinc boinc       648 Apr  6 05:10 FDrLDmaUSJ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmP9ALDmHGLaEo.diag
[2025-04-06 05:10:02] -rw-rw-r-- 1 boinc boinc     21318 Apr  6 05:10 stderr.txt
[2025-04-06 05:10:02] HITS file was successfully produced:
[2025-04-06 05:10:02] -rw------- 1 boinc boinc 299196531 Apr  6 05:09 shared/HITS.pool.root.1
[2025-04-06 05:10:02]  *** Contents of shared directory: ***
[2025-04-06 05:10:02] total 629336
[2025-04-06 05:10:02] -rw-r--r-- 2 boinc boinc     17571 Apr  6 03:54 start_atlas.sh
[2025-04-06 05:10:02] -rw-r--r-- 2 boinc boinc    507259 Apr  6 03:54 input.tar.gz
[2025-04-06 05:10:02] -rw-r--r-- 2 boinc boinc 343871310 Apr  6 03:54 ATLAS.root_0
[2025-04-06 05:10:02] -rw------- 1 boinc boinc 299196531 Apr  6 05:09 HITS.pool.root.1
[2025-04-06 05:10:02] -rw------- 1 boinc boinc    829440 Apr  6 05:10 result.tar.gz
05:10:03 (3892793): run_atlas exited; CPU time 40956.467340
05:10:03 (3892793): called boinc_finish(0)

</stderr_txt>
]]>

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