Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
21:11:35 (3769416): wrapper (7.7.26015): starting
21:11:35 (3769416): wrapper: running run_atlas (--nthreads 12)
[2025-04-05 21:11:35] Arguments: --nthreads 12
[2025-04-05 21:11:35] Threads: 12
[2025-04-05 21:11:35] Checking for CVMFS
[2025-04-05 21:11:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-05 21:11:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-05 21:11:35] Running cvmfs_config stat atlas.cern.ch
[2025-04-05 21:11:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-05 21:11:36] 2.12.7.0 3477254 873 61728 144539 2 56 2160244 4096001 0 130560 0 796443 99.991 214774 1540 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-05 21:11:36] CVMFS is ok
[2025-04-05 21:11:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-05 21:11:36] Checking for apptainer binary...
[2025-04-05 21:11:36] apptainer is not installed, using version from CVMFS
[2025-04-05 21:11:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-05 21:11:36] ryzen7
[2025-04-05 21:11:36] apptainer works
[2025-04-05 21:11:36] Set ATHENA_PROC_NUMBER=12
[2025-04-05 21:11:36] Set ATHENA_CORE_NUMBER=12
[2025-04-05 21:11:36] Starting ATLAS job with PandaID=6585399723
[2025-04-05 21:11:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-05 22:32:03]  *** The last 200 lines of the pilot log: ***
[2025-04-05 22:32:03]  mtime=0
[2025-04-05 22:32:03]  protocol_id=None
[2025-04-05 22:32:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-05 22:32:03]  replicas=None
[2025-04-05 22:32:03]  scope=mc23_13p6TeV
[2025-04-05 22:32:03]  status=None
[2025-04-05 22:32:03]  status_code=0
[2025-04-05 22:32:03]  storage_token=
[2025-04-05 22:32:03]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6585399723/log.43634898._015002.job.log.tgz.1
[2025-04-05 22:32:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/c1/log.43634898._015002.job.log.tgz.1
[2025-04-05 22:32:03]  workdir=None
[2025-04-05 22:32:03] ]
[2025-04-05 22:32:03] 2025-04-05 22:31:34,420 | INFO     | transferring file log.43634898._015002.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6585399723/log.43634898._015002.job.log.tgz.1 t
[2025-04-05 22:32:03] 2025-04-05 22:31:34,420 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6585399723/log.43634898._015002.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-05 22:32:03] 2025-04-05 22:31:34,429 | INFO     | adding to output.list: log.43634898._015002.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/c1/log.43634898._015002.job.log.tg
[2025-04-05 22:32:03] 2025-04-05 22:31:34,430 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-05 22:32:03] 2025-04-05 22:31:34,430 | INFO     | summary of transferred files:
[2025-04-05 22:32:03] 2025-04-05 22:31:34,430 | INFO     |  -- lfn=log.43634898._015002.job.log.tgz.1, status_code=0, status=transferred
[2025-04-05 22:32:03] 2025-04-05 22:31:34,430 | INFO     | stage-out finished correctly
[2025-04-05 22:32:03] 2025-04-05 22:31:37,030 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-05 22:32:03] 2025-04-05 22:31:37,081 | INFO     | job 6585399723 has state=finished
[2025-04-05 22:32:03] 2025-04-05 22:31:37,081 | INFO     | preparing for final server update for job 6585399723 in state='finished'
[2025-04-05 22:32:03] 2025-04-05 22:31:37,081 | INFO     | this job has now completed (state=finished)
[2025-04-05 22:32:03] 2025-04-05 22:31:37,082 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-05 22:32:03] 2025-04-05 22:31:37,082 | INFO     | log transfer has been attempted: DONE
[2025-04-05 22:32:03] 2025-04-05 22:31:37,082 | INFO     | job 6585399723 has finished - writing final server update
[2025-04-05 22:32:03] 2025-04-05 22:31:37,082 | INFO     | total number of processed events: 400 (read)
[2025-04-05 22:32:03] 2025-04-05 22:31:37,103 | INFO     | executing command: lscpu
[2025-04-05 22:32:03] 2025-04-05 22:31:37,118 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-05 22:32:03] 2025-04-05 22:31:39,006 | WARNING  | process 3779659 can no longer be monitored (due to stat problems) - aborting
[2025-04-05 22:32:03] 2025-04-05 22:31:39,006 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6585399723/memory_monitor_summary.json (trf name=prmon)
[2025-04-05 22:32:03] 2025-04-05 22:31:39,085 | INFO     | number of running child processes to parent process 3779659: 1
[2025-04-05 22:32:03] 2025-04-05 22:31:39,085 | INFO     | maximum number of monitored processes: 6
[2025-04-05 22:32:03] 2025-04-05 22:31:41,589 | INFO     | monitor loop #358: job 0:6585399723 is in state 'finished'
[2025-04-05 22:32:03] 2025-04-05 22:31:41,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 22:32:03] 2025-04-05 22:31:44,092 | INFO     | monitor loop #359: job 0:6585399723 is in state 'finished'
[2025-04-05 22:32:03] 2025-04-05 22:31:44,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 22:32:03] 2025-04-05 22:31:44,620 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-05 22:32:03] 2025-04-05 22:31:44,620 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6585399723/memory_monitor_summary.json (trf name=prmon)
[2025-04-05 22:32:03] 2025-04-05 22:31:44,620 | INFO     | extracted standard info from prmon json
[2025-04-05 22:32:03] 2025-04-05 22:31:44,620 | INFO     | extracted standard memory fields from prmon json
[2025-04-05 22:32:03] 2025-04-05 22:31:44,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-05 22:32:03] 2025-04-05 22:31:44,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-05 22:32:03] 2025-04-05 22:31:44,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-05 22:32:03] 2025-04-05 22:31:44,622 | INFO     | fitting pss+swap vs Time
[2025-04-05 22:32:03] 2025-04-05 22:31:44,622 | INFO     | sum of square deviations: 110960220.0
[2025-04-05 22:32:03] 2025-04-05 22:31:44,622 | INFO     | sum of deviations: 18761976423.99999
[2025-04-05 22:32:03] 2025-04-05 22:31:44,622 | INFO     | mean x: 1743889973.0
[2025-04-05 22:32:03] 2025-04-05 22:31:44,622 | INFO     | mean y: 2776532.2253521127
[2025-04-05 22:32:03] 2025-04-05 22:31:44,622 | INFO     | -- intersect: -294867065646.1335
[2025-04-05 22:32:03] 2025-04-05 22:31:44,622 | INFO     | intersect: -294867065646.1335
[2025-04-05 22:32:03] 2025-04-05 22:31:44,622 | INFO     | chi2: 2.1100488559913115
[2025-04-05 22:32:03] 2025-04-05 22:31:44,622 | INFO     | -- intersect: -294867065646.1335
[2025-04-05 22:32:03] 2025-04-05 22:31:44,623 | INFO     | current memory leak: 169.09 B/s (using 71 data points, chi2=2.11)
[2025-04-05 22:32:03] 2025-04-05 22:31:44,623 | INFO     | ..............................
[2025-04-05 22:32:03] 2025-04-05 22:31:44,623 | INFO     | . Timing measurements:
[2025-04-05 22:32:03] 2025-04-05 22:31:44,623 | INFO     | . get job = 0 s
[2025-04-05 22:32:03] 2025-04-05 22:31:44,623 | INFO     | . initial setup = 1 s
[2025-04-05 22:32:03] 2025-04-05 22:31:44,623 | INFO     | . payload setup = 5 s
[2025-04-05 22:32:03] 2025-04-05 22:31:44,623 | INFO     | . stage-in = 0 s
[2025-04-05 22:32:03] 2025-04-05 22:31:44,623 | INFO     | . payload execution = 4764 s
[2025-04-05 22:32:03] 2025-04-05 22:31:44,623 | INFO     | . stage-out = 0 s
[2025-04-05 22:32:03] 2025-04-05 22:31:44,623 | INFO     | . log creation = 0 s
[2025-04-05 22:32:03] 2025-04-05 22:31:44,623 | INFO     | ..............................
[2025-04-05 22:32:03] 2025-04-05 22:31:44,679 | INFO     | 
[2025-04-05 22:32:03] 2025-04-05 22:31:44,679 | INFO     | job summary report
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | --------------------------------------------------
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | PanDA job id: 6585399723
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | task id: 43634898
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | errors: (none)
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | pilot state: finished 
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | transexitcode: 0
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | exeerrorcode: 0
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | exeerrordiag: 
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | exitcode: 0
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | exitmsg: OK
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | cpuconsumptiontime: 43536 s
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | nevents: 400
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | neventsw: 0
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | pid: 3779659
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | pgrp: 3779659
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | corecount: 12
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | event service: False
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | sizes: {0: 2417372, 4: 2417578, 11: 2417606, 4773: 2443853, 4774: 2452840, 4777: 2452896, 4784: 2453194}
[2025-04-05 22:32:03] 2025-04-05 22:31:44,680 | INFO     | --------------------------------------------------
[2025-04-05 22:32:03] 2025-04-05 22:31:44,681 | INFO     | 
[2025-04-05 22:32:03] 2025-04-05 22:31:44,681 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-05 22:32:03] 2025-04-05 22:31:44,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-05 22:32:03] 2025-04-05 22:31:44,696 | INFO     | job 6585399723 has completed (purged errors)
[2025-04-05 22:32:03] 2025-04-05 22:31:44,696 | INFO     | overall cleanup function is called
[2025-04-05 22:32:03] 2025-04-05 22:31:45,702 | INFO     | --- collectZombieJob: --- 10, [3779659]
[2025-04-05 22:32:03] 2025-04-05 22:31:45,702 | INFO     | zombie collector waiting for pid 3779659
[2025-04-05 22:32:03] 2025-04-05 22:31:45,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-05 22:32:03] 2025-04-05 22:31:45,702 | INFO     | collected zombie processes
[2025-04-05 22:32:03] 2025-04-05 22:31:45,702 | INFO     | will attempt to kill all subprocesses of pid=3779659
[2025-04-05 22:32:03] 2025-04-05 22:31:45,779 | INFO     | process IDs to be killed: [3779659] (in reverse order)
[2025-04-05 22:32:03] 2025-04-05 22:31:45,807 | WARNING  | found no corresponding commands to process id(s)
[2025-04-05 22:32:03] 2025-04-05 22:31:45,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-05 22:32:03] 2025-04-05 22:31:45,809 | INFO     | did not find any defunct processes belonging to 3779659
[2025-04-05 22:32:03] 2025-04-05 22:31:45,811 | INFO     | did not find any defunct processes belonging to 3779659
[2025-04-05 22:32:03] 2025-04-05 22:31:45,811 | INFO     | ready for new job
[2025-04-05 22:32:03] 2025-04-05 22:31:45,811 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-05 22:32:03] 2025-04-05 22:31:45,812 | INFO     | **************************************
[2025-04-05 22:32:03] 2025-04-05 22:31:45,812 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-05 22:32:03] 2025-04-05 22:31:45,812 | INFO     | **************************************
[2025-04-05 22:32:03] 2025-04-05 22:31:45,812 | INFO     | 
[2025-04-05 22:32:03] 2025-04-05 22:31:45,831 | INFO     | architecture information:
[2025-04-05 22:32:03] 2025-04-05 22:31:45,831 | INFO     | executing command: cat /etc/os-release
[2025-04-05 22:32:03] 2025-04-05 22:31:45,838 | INFO     | cat /etc/os-release:
[2025-04-05 22:32:03] NAME="CentOS Linux"
[2025-04-05 22:32:03] VERSION="7 (Core)"
[2025-04-05 22:32:03] ID="centos"
[2025-04-05 22:32:03] ID_LIKE="rhel fedora"
[2025-04-05 22:32:03] VERSION_ID="7"
[2025-04-05 22:32:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-05 22:32:03] ANSI_COLOR="0;31"
[2025-04-05 22:32:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-05 22:32:03] HOME_URL="https://www.centos.org/"
[2025-04-05 22:32:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-05 22:32:03] 
[2025-04-05 22:32:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-05 22:32:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-05 22:32:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-05 22:32:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-05 22:32:03] 
[2025-04-05 22:32:03] 2025-04-05 22:31:45,838 | INFO     | **************************************
[2025-04-05 22:32:03] 2025-04-05 22:31:46,341 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-05 22:32:03] 2025-04-05 22:31:46,349 | INFO     | sufficient remaining disk space (174360363008 B)
[2025-04-05 22:32:03] 2025-04-05 22:31:46,349 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-05 22:32:03] 2025-04-05 22:31:46,349 | INFO     | current server update state: UPDATING_FINAL
[2025-04-05 22:32:03] 2025-04-05 22:31:46,349 | INFO     | update_server=False
[2025-04-05 22:32:03] 2025-04-05 22:31:46,349 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-05 22:32:03] 2025-04-05 22:31:46,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-05 22:32:03] 2025-04-05 22:31:46,564 | INFO     | all data control threads have been joined
[2025-04-05 22:32:03] 2025-04-05 22:31:46,594 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-05 22:32:03] 2025-04-05 22:31:46,594 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-05 22:32:03] 2025-04-05 22:31:46,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-05 22:32:03] 2025-04-05 22:31:46,594 | INFO     | will abort loop
[2025-04-05 22:32:03] 2025-04-05 22:31:46,749 | INFO     | all payload control threads have been joined
[2025-04-05 22:32:03] 2025-04-05 22:31:47,241 | INFO     | PID=3773128 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-05 22:32:03] 2025-04-05 22:31:47,241 | INFO     | found 0 job(s) in 20 queues
[2025-04-05 22:32:03] 2025-04-05 22:31:47,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-05 22:32:03] 2025-04-05 22:31:47,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-05 22:32:03] 2025-04-05 22:31:47,354 | INFO     | [job] retrieve thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:47,354 | INFO     | [job] queue monitor thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:47,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-05 22:32:03] 2025-04-05 22:31:47,518 | INFO     | [payload] validate_post thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:47,544 | INFO     | all job control threads have been joined
[2025-04-05 22:32:03] 2025-04-05 22:31:47,566 | INFO     | [data] control thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:47,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-05 22:32:03] 2025-04-05 22:31:47,598 | INFO     | [job] job monitor thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:47,754 | INFO     | [payload] control thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:47,802 | INFO     | [payload] failed_post thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:47,966 | INFO     | [job] validate thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:48,158 | INFO     | [payload] execute_payloads thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:48,506 | INFO     | [data] copytool_in thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:48,546 | INFO     | [job] control thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:48,566 | INFO     | [payload] validate_pre thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:48,650 | INFO     | [job] create_data_payload thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:49,514 | INFO     | [data] copytool_out thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:51,598 | INFO     | [data] queue_monitor thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:56,938 | INFO     | job.realtimelogging is not enabled
[2025-04-05 22:32:03] 2025-04-05 22:31:57,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-05 22:32:03] 2025-04-05 22:31:58,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125025498944)>', '<ExcThread(monitor, started 140124798469888)>']
[2025-04-05 22:32:03] 2025-04-05 22:31:59,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-05 22:32:03] 2025-04-05 22:31:59,290 | INFO     | [monitor] control thread has ended
[2025-04-05 22:32:03] 2025-04-05 22:32:03,818 | INFO     | all workflow threads have been joined
[2025-04-05 22:32:03] 2025-04-05 22:32:03,818 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-05 22:32:03] 2025-04-05 22:32:03,818 | INFO     | traces error code: 0
[2025-04-05 22:32:03] 2025-04-05 22:32:03,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-05 22:32:03] 2025-04-05 22:32:03,874 [wrapper] ==== pilot stdout END ====
[2025-04-05 22:32:03] 2025-04-05 22:32:03,876 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-05 22:32:03] 2025-04-05 22:32:03,879 [wrapper] pilotpid: 3773128
[2025-04-05 22:32:03] 2025-04-05 22:32:03,883 [wrapper] Pilot exit status: 0
[2025-04-05 22:32:03] 2025-04-05 22:32:03,903 [wrapper] pandaids: 6585399723
[2025-04-05 22:32:03] 2025-04-05 22:32:03,923 [wrapper] cleanup supervisor_pilot 3791425 3773129
[2025-04-05 22:32:03] 2025-04-05 22:32:03,927 [wrapper] Test setup, not cleaning
[2025-04-05 22:32:03] 2025-04-05 22:32:03,931 [wrapper] apfmon messages muted
[2025-04-05 22:32:03] 2025-04-05 22:32:03,932 [wrapper] ==== wrapper stdout END ====
[2025-04-05 22:32:03] 2025-04-05 22:32:03,934 [wrapper] ==== wrapper stderr END ====
[2025-04-05 22:32:03]  *** Error codes and diagnostics ***
[2025-04-05 22:32:03]     "exeErrorCode": 0,
[2025-04-05 22:32:03]     "exeErrorDiag": "",
[2025-04-05 22:32:03]     "pilotErrorCode": 0,
[2025-04-05 22:32:03]     "pilotErrorDiag": "",
[2025-04-05 22:32:03]  *** Listing of results directory ***
[2025-04-05 22:32:03] total 671456
[2025-04-05 22:32:03] -rw-r--r-- 1 boinc boinc    495897 Apr  3 13:40 pilot3.tar.gz
[2025-04-05 22:32:03] -rwx------ 1 boinc boinc     37140 Apr  3 13:53 runpilot2-wrapper.sh
[2025-04-05 22:32:03] -rw-r--r-- 1 boinc boinc      5111 Apr  3 13:53 queuedata.json
[2025-04-05 22:32:03] -rw-rw-r-- 1 boinc boinc       100 Apr  5 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-05 22:32:03] -rwxr-xr-x 1 boinc boinc      7986 Apr  5 21:11 run_atlas
[2025-04-05 22:32:03] -rw-rw-r-- 1 boinc boinc       105 Apr  5 21:11 job.xml
[2025-04-05 22:32:03] -rw-r--r-- 2 boinc boinc     17569 Apr  5 21:11 start_atlas.sh
[2025-04-05 22:32:03] drwxrwx--x 2 boinc boinc      4096 Apr  5 21:11 shared
[2025-04-05 22:32:03] -rw-r--r-- 2 boinc boinc    508893 Apr  5 21:11 input.tar.gz
[2025-04-05 22:32:03] -rw-rw-r-- 1 boinc boinc      9677 Apr  5 21:11 init_data.xml
[2025-04-05 22:32:03] -rw-r--r-- 2 boinc boinc 358743499 Apr  5 21:11 EVNT.43634896._000578.pool.root.1
[2025-04-05 22:32:03] -rw-rw-r-- 1 boinc boinc         0 Apr  5 21:11 boinc_lockfile
[2025-04-05 22:32:03] -rw-rw-r-- 1 boinc boinc      2599 Apr  5 21:11 pandaJob.out
[2025-04-05 22:32:03] -rw------- 1 boinc boinc       424 Apr  5 21:11 setup.sh.local
[2025-04-05 22:32:03] -rw------- 1 boinc boinc    980067 Apr  5 21:11 agis_schedconf.cvmfs.json
[2025-04-05 22:32:03] -rw------- 1 boinc boinc   1603525 Apr  5 21:11 agis_ddmendpoints.agis.ALL.json
[2025-04-05 22:32:03] drwx------ 4 boinc boinc      4096 Apr  5 21:11 pilot3
[2025-04-05 22:32:03] -rw------- 1 boinc boinc 323321724 Apr  5 22:31 HITS.43634898._015002.pool.root.1
[2025-04-05 22:32:03] -rw-rw-r-- 1 boinc boinc       531 Apr  5 22:31 boinc_task_state.xml
[2025-04-05 22:32:03] -rw------- 1 boinc boinc      1030 Apr  5 22:31 memory_monitor_summary.json
[2025-04-05 22:32:03] -rw------- 1 boinc boinc        95 Apr  5 22:31 pilot_heartbeat.json
[2025-04-05 22:32:03] -rw------- 1 boinc boinc    353549 Apr  5 22:31 log.43634898._015002.job.log.tgz.1
[2025-04-05 22:32:03] -rw------- 1 boinc boinc      7653 Apr  5 22:31 heartbeat.json
[2025-04-05 22:32:03] -rw-rw-r-- 1 boinc boinc        27 Apr  5 22:31 wrapper_checkpoint.txt
[2025-04-05 22:32:03] -rw-rw-r-- 1 boinc boinc      8192 Apr  5 22:31 boinc_mmap_file
[2025-04-05 22:32:03] -rw------- 1 boinc boinc      4954 Apr  5 22:32 pilotlog.txt
[2025-04-05 22:32:03] -rw------- 1 boinc boinc    476479 Apr  5 22:32 log.43634898._015002.job.log.1
[2025-04-05 22:32:03] -rw------- 1 boinc boinc       357 Apr  5 22:32 output.list
[2025-04-05 22:32:03] -rw-rw-r-- 1 boinc boinc       620 Apr  5 22:32 runtime_log
[2025-04-05 22:32:03] -rw------- 1 boinc boinc    849920 Apr  5 22:32 result.tar.gz
[2025-04-05 22:32:03] -rw-rw-r-- 1 boinc boinc     11399 Apr  5 22:32 runtime_log.err
[2025-04-05 22:32:03] -rw------- 1 boinc boinc       649 Apr  5 22:32 gMANDm9BaK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm6NHLDmr1NM8n.diag
[2025-04-05 22:32:03] -rw-rw-r-- 1 boinc boinc     21553 Apr  5 22:32 stderr.txt
[2025-04-05 22:32:04] HITS file was successfully produced:
[2025-04-05 22:32:04] -rw------- 1 boinc boinc 323321724 Apr  5 22:31 shared/HITS.pool.root.1
[2025-04-05 22:32:04]  *** Contents of shared directory: ***
[2025-04-05 22:32:04] total 667440
[2025-04-05 22:32:04] -rw-r--r-- 2 boinc boinc     17569 Apr  5 21:11 start_atlas.sh
[2025-04-05 22:32:04] -rw-r--r-- 2 boinc boinc    508893 Apr  5 21:11 input.tar.gz
[2025-04-05 22:32:04] -rw-r--r-- 2 boinc boinc 358743499 Apr  5 21:11 ATLAS.root_0
[2025-04-05 22:32:04] -rw------- 1 boinc boinc 323321724 Apr  5 22:31 HITS.pool.root.1
[2025-04-05 22:32:04] -rw------- 1 boinc boinc    849920 Apr  5 22:32 result.tar.gz
22:32:05 (3769416): run_atlas exited; CPU time 43564.631833
22:32:05 (3769416): called boinc_finish(0)

</stderr_txt>
]]>

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