Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:16:15 (3051442): wrapper (7.7.26015): starting
08:16:15 (3051442): wrapper: running run_atlas (--nthreads 9)
[2025-04-04 08:16:15] Arguments: --nthreads 9
[2025-04-04 08:16:15] Threads: 9
[2025-04-04 08:16:15] Checking for CVMFS
[2025-04-04 08:16:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 08:16:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 08:16:16] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 08:16:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 08:16:17] 2.12.6.0 1244576 91150 293036 144489 1 98 18584419 32935936 15665 130560 0 10172922 99.739 7121557 28631 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 08:16:17] CVMFS is ok
[2025-04-04 08:16:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 08:16:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 08:16:17] Further information can be found at the LHC@home message board.
[2025-04-04 08:16:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 08:16:17] Checking for apptainer binary...
[2025-04-04 08:16:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 08:16:17] Running /usr/bin/apptainer --version
[2025-04-04 08:16:17] apptainer version 1.4.0-1.el9
[2025-04-04 08:16:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 08:16:18] c6-1-24-4.aglt2.org
[2025-04-04 08:16:18] apptainer works
[2025-04-04 08:16:18] Set ATHENA_PROC_NUMBER=9
[2025-04-04 08:16:18] Set ATHENA_CORE_NUMBER=9
[2025-04-04 08:16:18] Starting ATLAS job with PandaID=6586399417
[2025-04-04 08:16:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 19:52:40]  *** The last 200 lines of the pilot log: ***
[2025-04-04 19:52:40] 2025-04-04 23:52:13,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 19:52:40] 2025-04-04 23:52:16,269 | INFO     | monitor loop #2261: job 0:6586399417 is in state 'finished'
[2025-04-04 19:52:40] 2025-04-04 23:52:16,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 19:52:40] 2025-04-04 23:52:18,775 | INFO     | monitor loop #2262: job 0:6586399417 is in state 'finished'
[2025-04-04 19:52:40] 2025-04-04 23:52:18,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 19:52:40] 2025-04-04 23:52:21,280 | INFO     | monitor loop #2263: job 0:6586399417 is in state 'finished'
[2025-04-04 19:52:40] 2025-04-04 23:52:21,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 19:52:40] 2025-04-04 23:52:22,715 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-04 19:52:40] 2025-04-04 23:52:22,716 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6586399417/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 19:52:40] 2025-04-04 23:52:22,717 | INFO     | extracted standard info from prmon json
[2025-04-04 19:52:40] 2025-04-04 23:52:22,717 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 19:52:40] 2025-04-04 23:52:22,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 19:52:40] 2025-04-04 23:52:22,717 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 19:52:40] 2025-04-04 23:52:22,717 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 19:52:40] 2025-04-04 23:52:22,732 | INFO     | fitting pss+swap vs Time
[2025-04-04 19:52:40] 2025-04-04 23:52:22,733 | INFO     | sum of square deviations: 97931124485.59467
[2025-04-04 19:52:40] 2025-04-04 23:52:22,744 | INFO     | sum of deviations: 392443759342.54205
[2025-04-04 19:52:40] 2025-04-04 23:52:22,744 | INFO     | mean x: 1743789965.6563876
[2025-04-04 19:52:40] 2025-04-04 23:52:22,744 | INFO     | mean y: 2249557.5535976505
[2025-04-04 19:52:40] 2025-04-04 23:52:22,744 | INFO     | -- intersect: -6985717681.877611
[2025-04-04 19:52:40] 2025-04-04 23:52:22,745 | INFO     | intersect: -6985717681.877611
[2025-04-04 19:52:40] 2025-04-04 23:52:22,746 | INFO     | chi2: 6.271318476637144
[2025-04-04 19:52:40] 2025-04-04 23:52:22,747 | INFO     | sum of square deviations: 95789951344.74725
[2025-04-04 19:52:40] 2025-04-04 23:52:22,755 | INFO     | sum of deviations: 470455914632.207
[2025-04-04 19:52:40] 2025-04-04 23:52:22,755 | INFO     | mean x: 1743789813.1597633
[2025-04-04 19:52:40] 2025-04-04 23:52:22,756 | INFO     | mean y: 2255086.7943786983
[2025-04-04 19:52:40] 2025-04-04 23:52:22,756 | INFO     | -- intersect: -8562069458.312387
[2025-04-04 19:52:40] 2025-04-04 23:52:22,756 | INFO     | intersect: -8562069458.312387
[2025-04-04 19:52:40] 2025-04-04 23:52:22,757 | INFO     | chi2: 4.708425625385575
[2025-04-04 19:52:40] 2025-04-04 23:52:22,757 | INFO     | current chi2=4.708425625385575 (change=24.921280223192163 %)
[2025-04-04 19:52:40] 2025-04-04 23:52:22,757 | INFO     | right removable region: 675
[2025-04-04 19:52:40] 2025-04-04 23:52:22,758 | INFO     | sum of square deviations: 95789720093.42513
[2025-04-04 19:52:40] 2025-04-04 23:52:22,770 | INFO     | sum of deviations: 235156510342.91852
[2025-04-04 19:52:40] 2025-04-04 23:52:22,770 | INFO     | mean x: 1743790118.1612425
[2025-04-04 19:52:40] 2025-04-04 23:52:22,770 | INFO     | mean y: 2260747.477810651
[2025-04-04 19:52:40] 2025-04-04 23:52:22,771 | INFO     | -- intersect: -4278611965.7665987
[2025-04-04 19:52:40] 2025-04-04 23:52:22,771 | INFO     | intersect: -4278611965.7665987
[2025-04-04 19:52:40] 2025-04-04 23:52:22,772 | INFO     | chi2: 3.810796266082015
[2025-04-04 19:52:40] 2025-04-04 23:52:22,772 | INFO     | current chi2=3.810796266082015 (change=39.23452810954244 %)
[2025-04-04 19:52:40] 2025-04-04 23:52:22,773 | INFO     | sum of square deviations: 93679840745.88095
[2025-04-04 19:52:40] 2025-04-04 23:52:22,784 | INFO     | sum of deviations: 134687379374.9584
[2025-04-04 19:52:40] 2025-04-04 23:52:22,784 | INFO     | mean x: 1743790270.6631892
[2025-04-04 19:52:40] 2025-04-04 23:52:22,784 | INFO     | mean y: 2268006.9821162443
[2025-04-04 19:52:40] 2025-04-04 23:52:22,785 | INFO     | -- intersect: -2504851346.1803336
[2025-04-04 19:52:40] 2025-04-04 23:52:22,785 | INFO     | intersect: -2504851346.1803336
[2025-04-04 19:52:40] 2025-04-04 23:52:22,786 | INFO     | chi2: 2.896490364194069
[2025-04-04 19:52:40] 2025-04-04 23:52:22,786 | INFO     | current chi2=2.896490364194069 (change=23.99251594806376 %)
[2025-04-04 19:52:40] 2025-04-04 23:52:22,786 | INFO     | left removable region: 20
[2025-04-04 19:52:40] 2025-04-04 23:52:22,787 | INFO     | sum of square deviations: 87136834339.02908
[2025-04-04 19:52:40] 2025-04-04 23:52:22,799 | INFO     | sum of deviations: 73025265262.00766
[2025-04-04 19:52:40] 2025-04-04 23:52:22,799 | INFO     | mean x: 1743790392.6778626
[2025-04-04 19:52:40] 2025-04-04 23:52:22,799 | INFO     | mean y: 2284139.86259542
[2025-04-04 19:52:40] 2025-04-04 23:52:22,799 | INFO     | -- intersect: -1459104226.5220299
[2025-04-04 19:52:40] 2025-04-04 23:52:22,799 | INFO     | intersect: -1459104226.5220299
[2025-04-04 19:52:40] 2025-04-04 23:52:22,800 | INFO     | chi2: 0.28024346589303556
[2025-04-04 19:52:40] 2025-04-04 23:52:22,801 | INFO     | -- intersect: -1459104226.5220299
[2025-04-04 19:52:40] 2025-04-04 23:52:22,801 | INFO     | current memory leak: 0.84 B/s (using 655 data points, chi2=0.28)
[2025-04-04 19:52:40] 2025-04-04 23:52:22,802 | INFO     | ..............................
[2025-04-04 19:52:40] 2025-04-04 23:52:22,802 | INFO     | . Timing measurements:
[2025-04-04 19:52:40] 2025-04-04 23:52:22,802 | INFO     | . get job = 0 s
[2025-04-04 19:52:40] 2025-04-04 23:52:22,803 | INFO     | . initial setup = 12 s
[2025-04-04 19:52:40] 2025-04-04 23:52:22,803 | INFO     | . payload setup = 55 s
[2025-04-04 19:52:40] 2025-04-04 23:52:22,803 | INFO     | . stage-in = 0 s
[2025-04-04 19:52:40] 2025-04-04 23:52:22,803 | INFO     | . payload execution = 41530 s
[2025-04-04 19:52:40] 2025-04-04 23:52:22,803 | INFO     | . stage-out = 6 s
[2025-04-04 19:52:40] 2025-04-04 23:52:22,803 | INFO     | . log creation = 3 s
[2025-04-04 19:52:40] 2025-04-04 23:52:22,803 | INFO     | ..............................
[2025-04-04 19:52:40] 2025-04-04 23:52:22,937 | INFO     | 
[2025-04-04 19:52:40] 2025-04-04 23:52:22,938 | INFO     | job summary report
[2025-04-04 19:52:40] 2025-04-04 23:52:22,938 | INFO     | --------------------------------------------------
[2025-04-04 19:52:40] 2025-04-04 23:52:22,938 | INFO     | PanDA job id: 6586399417
[2025-04-04 19:52:40] 2025-04-04 23:52:22,938 | INFO     | task id: 43634898
[2025-04-04 19:52:40] 2025-04-04 23:52:22,938 | INFO     | errors: (none)
[2025-04-04 19:52:40] 2025-04-04 23:52:22,938 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 19:52:40] 2025-04-04 23:52:22,939 | INFO     | pilot state: finished 
[2025-04-04 19:52:40] 2025-04-04 23:52:22,939 | INFO     | transexitcode: 0
[2025-04-04 19:52:40] 2025-04-04 23:52:22,939 | INFO     | exeerrorcode: 0
[2025-04-04 19:52:40] 2025-04-04 23:52:22,939 | INFO     | exeerrordiag: 
[2025-04-04 19:52:40] 2025-04-04 23:52:22,939 | INFO     | exitcode: 0
[2025-04-04 19:52:40] 2025-04-04 23:52:22,939 | INFO     | exitmsg: OK
[2025-04-04 19:52:40] 2025-04-04 23:52:22,939 | INFO     | cpuconsumptiontime: 79890 s
[2025-04-04 19:52:40] 2025-04-04 23:52:22,939 | INFO     | nevents: 400
[2025-04-04 19:52:40] 2025-04-04 23:52:22,939 | INFO     | neventsw: 0
[2025-04-04 19:52:40] 2025-04-04 23:52:22,939 | INFO     | pid: 3086682
[2025-04-04 19:52:40] 2025-04-04 23:52:22,939 | INFO     | pgrp: 3086682
[2025-04-04 19:52:40] 2025-04-04 23:52:22,940 | INFO     | corecount: 9
[2025-04-04 19:52:40] 2025-04-04 23:52:22,940 | INFO     | event service: False
[2025-04-04 19:52:40] 2025-04-04 23:52:22,940 | INFO     | sizes: {0: 2417122, 1: 2417206, 2: 2417405, 4: 2417405, 14: 2417433, 26: 2417461, 32: 2417823, 37: 2417851, 41588: 2459749, 41595: 2468746, 41605: 2468860}
[2025-04-04 19:52:40] 2025-04-04 23:52:22,940 | INFO     | --------------------------------------------------
[2025-04-04 19:52:40] 2025-04-04 23:52:22,940 | INFO     | 
[2025-04-04 19:52:40] 2025-04-04 23:52:22,940 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-04 19:52:40] 2025-04-04 23:52:22,964 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,964 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,964 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,964 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,964 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,964 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,964 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,964 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,964 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,964 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | job 6586399417 has completed (purged errors)
[2025-04-04 19:52:40] 2025-04-04 23:52:22,965 | INFO     | overall cleanup function is called
[2025-04-04 19:52:40] 2025-04-04 23:52:23,973 | INFO     | --- collectZombieJob: --- 10, [3086682]
[2025-04-04 19:52:40] 2025-04-04 23:52:23,973 | INFO     | zombie collector waiting for pid 3086682
[2025-04-04 19:52:40] 2025-04-04 23:52:23,974 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 19:52:40] 2025-04-04 23:52:23,974 | INFO     | collected zombie processes
[2025-04-04 19:52:40] 2025-04-04 23:52:23,974 | INFO     | will attempt to kill all subprocesses of pid=3086682
[2025-04-04 19:52:40] 2025-04-04 23:52:24,495 | INFO     | process IDs to be killed: [3086682] (in reverse order)
[2025-04-04 19:52:40] 2025-04-04 23:52:24,640 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 19:52:40] 2025-04-04 23:52:24,641 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 19:52:40] 2025-04-04 23:52:24,673 | INFO     | did not find any defunct processes belonging to 3086682
[2025-04-04 19:52:40] 2025-04-04 23:52:24,710 | INFO     | did not find any defunct processes belonging to 3086682
[2025-04-04 19:52:40] 2025-04-04 23:52:24,711 | INFO     | ready for new job
[2025-04-04 19:52:40] 2025-04-04 23:52:24,711 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 19:52:40] 2025-04-04 23:52:24,718 | INFO     | **************************************
[2025-04-04 19:52:40] 2025-04-04 23:52:24,719 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 19:52:40] 2025-04-04 23:52:24,719 | INFO     | **************************************
[2025-04-04 19:52:40] 2025-04-04 23:52:24,719 | INFO     | 
[2025-04-04 19:52:40] 2025-04-04 23:52:24,735 | INFO     | architecture information:
[2025-04-04 19:52:40] 2025-04-04 23:52:24,739 | INFO     | executing command: cat /etc/os-release
[2025-04-04 19:52:40] 2025-04-04 23:52:24,779 | INFO     | cat /etc/os-release:
[2025-04-04 19:52:40] NAME="CentOS Linux"
[2025-04-04 19:52:40] VERSION="7 (Core)"
[2025-04-04 19:52:40] ID="centos"
[2025-04-04 19:52:40] ID_LIKE="rhel fedora"
[2025-04-04 19:52:40] VERSION_ID="7"
[2025-04-04 19:52:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 19:52:40] ANSI_COLOR="0;31"
[2025-04-04 19:52:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 19:52:40] HOME_URL="https://www.centos.org/"
[2025-04-04 19:52:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 19:52:40] 
[2025-04-04 19:52:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 19:52:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 19:52:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 19:52:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 19:52:40] 
[2025-04-04 19:52:40] 2025-04-04 23:52:24,780 | INFO     | **************************************
[2025-04-04 19:52:40] 2025-04-04 23:52:25,284 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-04 19:52:40] 2025-04-04 23:52:25,357 | INFO     | sufficient remaining disk space (74291609600 B)
[2025-04-04 19:52:40] 2025-04-04 23:52:25,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 19:52:40] 2025-04-04 23:52:25,357 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 19:52:40] 2025-04-04 23:52:25,357 | INFO     | update_server=False
[2025-04-04 19:52:40] 2025-04-04 23:52:25,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 19:52:40] 2025-04-04 23:52:25,358 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 19:52:40] 2025-04-04 23:52:25,358 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 19:52:40] 2025-04-04 23:52:25,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 19:52:40] 2025-04-04 23:52:25,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 19:52:40] 2025-04-04 23:52:25,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 19:52:40] 2025-04-04 23:52:25,363 | INFO     | aborting loop
[2025-04-04 19:52:40] 2025-04-04 23:52:25,363 | INFO     | all payload control threads have been joined
[2025-04-04 19:52:40] 2025-04-04 23:52:25,626 | INFO     | all data control threads have been joined
[2025-04-04 19:52:40] 2025-04-04 23:52:25,761 | INFO     | all job control threads have been joined
[2025-04-04 19:52:40] 2025-04-04 23:52:26,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 19:52:40] 2025-04-04 23:52:26,363 | INFO     | [job] retrieve thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:26,370 | INFO     | [job] job monitor thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:26,380 | INFO     | [payload] control thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:26,454 | INFO     | [payload] validate_post thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:26,633 | INFO     | [data] control thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:26,636 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:26,768 | INFO     | [job] control thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:26,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:26,890 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:26,891 | INFO     | [data] copytool_in thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:26,927 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:26,980 | INFO     | [payload] failed_post thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:27,562 | INFO     | [job] validate thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:27,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 19:52:40] 2025-04-04 23:52:28,099 | INFO     | [data] copytool_out thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:28,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 19:52:40] 2025-04-04 23:52:28,969 | INFO     | [job] queue monitor thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:32,280 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 19:52:40] 2025-04-04 23:52:33,047 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139693124290368)>', '<ExcThread(monitor, started 139692620093184)>']
[2025-04-04 19:52:40] 2025-04-04 23:52:33,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 19:52:40] 2025-04-04 23:52:33,412 | INFO     | [monitor] control thread has ended
[2025-04-04 19:52:40] 2025-04-04 23:52:38,073 | INFO     | all workflow threads have been joined
[2025-04-04 19:52:40] 2025-04-04 23:52:38,074 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 19:52:40] 2025-04-04 23:52:38,074 | INFO     | traces error code: 0
[2025-04-04 19:52:40] 2025-04-04 23:52:38,074 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 19:52:40] 2025-04-04 23:52:39,181 [wrapper] ==== pilot stdout END ====
[2025-04-04 19:52:40] 2025-04-04 23:52:39,206 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 19:52:40] 2025-04-04 23:52:39,236 [wrapper] pilotpid: 3060687
[2025-04-04 19:52:40] 2025-04-04 23:52:39,255 [wrapper] Pilot exit status: 0
[2025-04-04 19:52:40] 2025-04-04 23:52:39,381 [wrapper] pandaids: 6586399417
[2025-04-04 19:52:40] 2025-04-04 23:52:39,610 [wrapper] cleanup supervisor_pilot 1503697 3060688
[2025-04-04 19:52:40] 2025-04-04 23:52:39,614 [wrapper] Test setup, not cleaning
[2025-04-04 19:52:40] 2025-04-04 23:52:39,619 [wrapper] apfmon messages muted
[2025-04-04 19:52:40] 2025-04-04 23:52:39,623 [wrapper] ==== wrapper stdout END ====
[2025-04-04 19:52:40] 2025-04-04 23:52:39,626 [wrapper] ==== wrapper stderr END ====
[2025-04-04 19:52:40]  *** Error codes and diagnostics ***
[2025-04-04 19:52:40]     "exeErrorCode": 0,
[2025-04-04 19:52:40]     "exeErrorDiag": "",
[2025-04-04 19:52:40]     "pilotErrorCode": 0,
[2025-04-04 19:52:40]     "pilotErrorDiag": "",
[2025-04-04 19:52:40]  *** Listing of results directory ***
[2025-04-04 19:52:40] total 682972
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 20:15 pilot3.tar.gz
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 20:21 queuedata.json
[2025-04-04 19:52:40] -rwx------. 1 boincer umatlas     37140 Apr  3 20:22 runpilot2-wrapper.sh
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas       100 Apr  4 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 19:52:40] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 08:16 run_atlas
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas       105 Apr  4 08:16 job.xml
[2025-04-04 19:52:40] -rw-r--r--. 2 boincer umatlas 361580833 Apr  4 08:16 EVNT.43634896._000710.pool.root.1
[2025-04-04 19:52:40] -rw-r--r--. 2 boincer umatlas    508892 Apr  4 08:16 input.tar.gz
[2025-04-04 19:52:40] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 08:16 shared
[2025-04-04 19:52:40] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 08:16 start_atlas.sh
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas         0 Apr  4 08:16 boinc_lockfile
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas      2599 Apr  4 08:16 pandaJob.out
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas       467 Apr  4 08:16 setup.sh.local
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas    979639 Apr  4 08:17 agis_schedconf.cvmfs.json
[2025-04-04 19:52:40] drwx------. 4 boincer umatlas      4096 Apr  4 08:17 pilot3
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas      6841 Apr  4 19:45 init_data.xml
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas 326468881 Apr  4 19:49 HITS.43634898._019138.pool.root.1
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas       532 Apr  4 19:49 boinc_task_state.xml
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas      1050 Apr  4 19:52 memory_monitor_summary.json
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas        95 Apr  4 19:52 pilot_heartbeat.json
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas   1603525 Apr  4 19:52 agis_ddmendpoints.agis.ALL.json
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas    638691 Apr  4 19:52 log.43634898._019138.job.log.tgz.1
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas      7729 Apr  4 19:52 heartbeat.json
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas        28 Apr  4 19:52 wrapper_checkpoint.txt
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 19:52 boinc_mmap_file
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas      4476 Apr  4 19:52 pilotlog.txt
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas   3095358 Apr  4 19:52 log.43634898._019138.job.log.1
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas       357 Apr  4 19:52 output.list
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas       620 Apr  4 19:52 runtime_log
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas   3758080 Apr  4 19:52 result.tar.gz
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas     11424 Apr  4 19:52 runtime_log.err
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas       661 Apr  4 19:52 7w5LDm6zjK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmdOtKDmiS3qim.diag
[2025-04-04 19:52:40] -rw-r--r--. 1 boincer umatlas     21234 Apr  4 19:52 stderr.txt
[2025-04-04 19:52:40] HITS file was successfully produced:
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas 326468881 Apr  4 19:49 shared/HITS.pool.root.1
[2025-04-04 19:52:40]  *** Contents of shared directory: ***
[2025-04-04 19:52:40] total 676128
[2025-04-04 19:52:40] -rw-r--r--. 2 boincer umatlas 361580833 Apr  4 08:16 ATLAS.root_0
[2025-04-04 19:52:40] -rw-r--r--. 2 boincer umatlas    508892 Apr  4 08:16 input.tar.gz
[2025-04-04 19:52:40] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 08:16 start_atlas.sh
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas 326468881 Apr  4 19:49 HITS.pool.root.1
[2025-04-04 19:52:40] -rw-------. 1 boincer umatlas   3758080 Apr  4 19:52 result.tar.gz
19:52:42 (3051442): run_atlas exited; CPU time 81294.578995
19:52:42 (3051442): called boinc_finish(0)

</stderr_txt>
]]>

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