Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:00:13 (46671): wrapper (7.7.26015): starting
01:00:13 (46671): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 01:00:13] Arguments: --nthreads 8
[2025-04-04 01:00:13] Threads: 8
[2025-04-04 01:00:13] Checking for CVMFS
[2025-04-04 01:00:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 01:00:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 01:00:14] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 01:00:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 01:00:16] 2.12.6.0 981265 17095 209860 144477 2 162 26282053 32935936 15674 130560 0 9963783 99.645 9695005 18051 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 01:00:16] CVMFS is ok
[2025-04-04 01:00:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 01:00:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 01:00:16] Further information can be found at the LHC@home message board.
[2025-04-04 01:00:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 01:00:16] Checking for apptainer binary...
[2025-04-04 01:00:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 01:00:16] Running /usr/bin/apptainer --version
[2025-04-04 01:00:16] apptainer version 1.4.0-1.el9
[2025-04-04 01:00:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 01:00:17] c6-4-5-1.aglt2.org
[2025-04-04 01:00:17] apptainer works
[2025-04-04 01:00:17] Set ATHENA_PROC_NUMBER=8
[2025-04-04 01:00:17] Set ATHENA_CORE_NUMBER=8
[2025-04-04 01:00:17] Starting ATLAS job with PandaID=6586399400
[2025-04-04 01:00:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 09:09:53]  *** The last 200 lines of the pilot log: ***
[2025-04-04 09:09:53] 2025-04-04 13:09:26,569 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6586399400/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 09:09:53] 2025-04-04 13:09:26,570 | INFO     | extracted standard info from prmon json
[2025-04-04 09:09:53] 2025-04-04 13:09:26,570 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 09:09:53] 2025-04-04 13:09:26,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 09:09:53] 2025-04-04 13:09:26,586 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 09:09:53] 2025-04-04 13:09:26,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 09:09:53] 2025-04-04 13:09:26,627 | INFO     | fitting pss+swap vs Time
[2025-04-04 09:09:53] 2025-04-04 13:09:26,628 | INFO     | sum of square deviations: 33654303305.811333
[2025-04-04 09:09:53] 2025-04-04 13:09:26,635 | INFO     | sum of deviations: 126628007845.07562
[2025-04-04 09:09:53] 2025-04-04 13:09:26,643 | INFO     | mean x: 1743757530.5849056
[2025-04-04 09:09:53] 2025-04-04 13:09:26,643 | INFO     | mean y: 2252211.0104821804
[2025-04-04 09:09:53] 2025-04-04 13:09:26,643 | INFO     | -- intersect: -6558826776.611482
[2025-04-04 09:09:53] 2025-04-04 13:09:26,643 | INFO     | intersect: -6558826776.611482
[2025-04-04 09:09:53] 2025-04-04 13:09:26,644 | INFO     | chi2: 9.342746338186204
[2025-04-04 09:09:53] 2025-04-04 13:09:26,645 | INFO     | sum of square deviations: 32607150159.082504
[2025-04-04 09:09:53] 2025-04-04 13:09:26,650 | INFO     | sum of deviations: 261072481404.13348
[2025-04-04 09:09:53] 2025-04-04 13:09:26,653 | INFO     | mean x: 1743757378.0911016
[2025-04-04 09:09:53] 2025-04-04 13:09:26,653 | INFO     | mean y: 2271790.531779661
[2025-04-04 09:09:53] 2025-04-04 13:09:26,653 | INFO     | -- intersect: -13959299933.582958
[2025-04-04 09:09:53] 2025-04-04 13:09:26,653 | INFO     | intersect: -13959299933.582958
[2025-04-04 09:09:53] 2025-04-04 13:09:26,654 | INFO     | chi2: 5.896741860994162
[2025-04-04 09:09:53] 2025-04-04 13:09:26,654 | INFO     | current chi2=5.896741860994162 (change=36.884277411100605 %)
[2025-04-04 09:09:53] 2025-04-04 13:09:26,655 | INFO     | sum of square deviations: 31581893084.698044
[2025-04-04 09:09:53] 2025-04-04 13:09:26,671 | INFO     | sum of deviations: 282365019896.8798
[2025-04-04 09:09:53] 2025-04-04 13:09:26,671 | INFO     | mean x: 1743757225.5931478
[2025-04-04 09:09:53] 2025-04-04 13:09:26,671 | INFO     | mean y: 2274923.4625267666
[2025-04-04 09:09:53] 2025-04-04 13:09:26,671 | INFO     | -- intersect: -15588178833.677876
[2025-04-04 09:09:53] 2025-04-04 13:09:26,671 | INFO     | intersect: -15588178833.677876
[2025-04-04 09:09:53] 2025-04-04 13:09:26,680 | INFO     | chi2: 5.225203407343995
[2025-04-04 09:09:53] 2025-04-04 13:09:26,680 | INFO     | current chi2=5.225203407343995 (change=11.388296613291955 %)
[2025-04-04 09:09:53] 2025-04-04 13:09:26,680 | INFO     | right removable region: 466
[2025-04-04 09:09:53] 2025-04-04 13:09:26,681 | INFO     | sum of square deviations: 32606979969.08251
[2025-04-04 09:09:53] 2025-04-04 13:09:26,686 | INFO     | sum of deviations: 16637264971.80511
[2025-04-04 09:09:53] 2025-04-04 13:09:26,686 | INFO     | mean x: 1743757683.0911016
[2025-04-04 09:09:53] 2025-04-04 13:09:26,686 | INFO     | mean y: 2268203.1440677964
[2025-04-04 09:09:53] 2025-04-04 13:09:26,686 | INFO     | -- intersect: -887460273.6334748
[2025-04-04 09:09:53] 2025-04-04 13:09:26,687 | INFO     | intersect: -887460273.6334748
[2025-04-04 09:09:53] 2025-04-04 13:09:26,687 | INFO     | chi2: 6.852784148839823
[2025-04-04 09:09:53] 2025-04-04 13:09:26,687 | INFO     | current chi2=6.852784148839823 (change=26.651287525267236 %)
[2025-04-04 09:09:53] 2025-04-04 13:09:26,688 | INFO     | sum of square deviations: 31581610532.317005
[2025-04-04 09:09:53] 2025-04-04 13:09:26,728 | INFO     | sum of deviations: -55797347844.19272
[2025-04-04 09:09:53] 2025-04-04 13:09:26,728 | INFO     | mean x: 1743757835.5974305
[2025-04-04 09:09:53] 2025-04-04 13:09:26,729 | INFO     | mean y: 2278972.8394004283
[2025-04-04 09:09:53] 2025-04-04 13:09:26,729 | INFO     | -- intersect: 3083092803.068349
[2025-04-04 09:09:53] 2025-04-04 13:09:26,729 | INFO     | intersect: 3083092803.068349
[2025-04-04 09:09:53] 2025-04-04 13:09:26,729 | INFO     | chi2: 5.847023351924597
[2025-04-04 09:09:53] 2025-04-04 13:09:26,729 | INFO     | current chi2=5.847023351924597 (change=14.67667410895324 %)
[2025-04-04 09:09:53] 2025-04-04 13:09:26,730 | INFO     | left removable region: 20
[2025-04-04 09:09:53] 2025-04-04 13:09:26,730 | INFO     | sum of square deviations: 27509866167.93731
[2025-04-04 09:09:53] 2025-04-04 13:09:26,765 | INFO     | sum of deviations: -12605875423.72198
[2025-04-04 09:09:53] 2025-04-04 13:09:26,765 | INFO     | mean x: 1743757805.116592
[2025-04-04 09:09:53] 2025-04-04 13:09:26,765 | INFO     | mean y: 2320945.340807175
[2025-04-04 09:09:53] 2025-04-04 13:09:26,765 | INFO     | -- intersect: 801364951.0896293
[2025-04-04 09:09:53] 2025-04-04 13:09:26,765 | INFO     | intersect: 801364951.0896293
[2025-04-04 09:09:53] 2025-04-04 13:09:26,771 | INFO     | chi2: 0.1273323980546773
[2025-04-04 09:09:53] 2025-04-04 13:09:26,772 | INFO     | -- intersect: 801364951.0896293
[2025-04-04 09:09:53] 2025-04-04 13:09:26,772 | INFO     | current memory leak: -0.46 B/s (using 446 data points, chi2=0.13)
[2025-04-04 09:09:53] 2025-04-04 13:09:26,772 | INFO     | ..............................
[2025-04-04 09:09:53] 2025-04-04 13:09:26,773 | INFO     | . Timing measurements:
[2025-04-04 09:09:53] 2025-04-04 13:09:26,773 | INFO     | . get job = 0 s
[2025-04-04 09:09:53] 2025-04-04 13:09:26,773 | INFO     | . initial setup = 6 s
[2025-04-04 09:09:53] 2025-04-04 13:09:26,773 | INFO     | . payload setup = 36 s
[2025-04-04 09:09:53] 2025-04-04 13:09:26,773 | INFO     | . stage-in = 0 s
[2025-04-04 09:09:53] 2025-04-04 13:09:26,773 | INFO     | . payload execution = 29113 s
[2025-04-04 09:09:53] 2025-04-04 13:09:26,773 | INFO     | . stage-out = 9 s
[2025-04-04 09:09:53] 2025-04-04 13:09:26,773 | INFO     | . log creation = 2 s
[2025-04-04 09:09:53] 2025-04-04 13:09:26,773 | INFO     | ..............................
[2025-04-04 09:09:53] 2025-04-04 13:09:27,792 | INFO     | 
[2025-04-04 09:09:53] 2025-04-04 13:09:27,792 | INFO     | job summary report
[2025-04-04 09:09:53] 2025-04-04 13:09:27,792 | INFO     | --------------------------------------------------
[2025-04-04 09:09:53] 2025-04-04 13:09:27,792 | INFO     | PanDA job id: 6586399400
[2025-04-04 09:09:53] 2025-04-04 13:09:27,792 | INFO     | task id: 43634898
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | errors: (none)
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | pilot state: finished 
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | transexitcode: 0
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | exeerrorcode: 0
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | exeerrordiag: 
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | exitcode: 0
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | exitmsg: OK
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | cpuconsumptiontime: 75005 s
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | nevents: 400
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | neventsw: 0
[2025-04-04 09:09:53] 2025-04-04 13:09:27,793 | INFO     | pid: 81410
[2025-04-04 09:09:53] 2025-04-04 13:09:27,794 | INFO     | pgrp: 81410
[2025-04-04 09:09:53] 2025-04-04 13:09:27,794 | INFO     | corecount: 8
[2025-04-04 09:09:53] 2025-04-04 13:09:27,794 | INFO     | event service: False
[2025-04-04 09:09:53] 2025-04-04 13:09:27,794 | INFO     | sizes: {0: 2417228, 1: 2417427, 2: 2417427, 12: 2417455, 23: 2417483, 32: 2417717, 34: 2417873, 29155: 2454336, 29165: 2463277, 29166: 2463333, 29222: 2463503}
[2025-04-04 09:09:53] 2025-04-04 13:09:27,794 | INFO     | --------------------------------------------------
[2025-04-04 09:09:53] 2025-04-04 13:09:27,794 | INFO     | 
[2025-04-04 09:09:53] 2025-04-04 13:09:27,794 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-04 09:09:53] 2025-04-04 13:09:28,613 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,613 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,613 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,613 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,614 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 09:09:53] 2025-04-04 13:09:28,615 | INFO     | job 6586399400 has completed (purged errors)
[2025-04-04 09:09:53] 2025-04-04 13:09:28,615 | INFO     | overall cleanup function is called
[2025-04-04 09:09:53] 2025-04-04 13:09:29,695 | INFO     | --- collectZombieJob: --- 10, [81410]
[2025-04-04 09:09:53] 2025-04-04 13:09:29,695 | INFO     | zombie collector waiting for pid 81410
[2025-04-04 09:09:53] 2025-04-04 13:09:29,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 09:09:53] 2025-04-04 13:09:29,695 | INFO     | collected zombie processes
[2025-04-04 09:09:53] 2025-04-04 13:09:29,695 | INFO     | will attempt to kill all subprocesses of pid=81410
[2025-04-04 09:09:53] 2025-04-04 13:09:33,339 | INFO     | process IDs to be killed: [81410] (in reverse order)
[2025-04-04 09:09:53] 2025-04-04 13:09:33,704 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 09:09:53] 2025-04-04 13:09:33,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 09:09:53] 2025-04-04 13:09:33,738 | INFO     | did not find any defunct processes belonging to 81410
[2025-04-04 09:09:53] 2025-04-04 13:09:33,809 | INFO     | did not find any defunct processes belonging to 81410
[2025-04-04 09:09:53] 2025-04-04 13:09:33,829 | INFO     | ready for new job
[2025-04-04 09:09:53] 2025-04-04 13:09:33,829 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 09:09:53] 2025-04-04 13:09:33,831 | INFO     | **************************************
[2025-04-04 09:09:53] 2025-04-04 13:09:33,831 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 09:09:53] 2025-04-04 13:09:33,831 | INFO     | **************************************
[2025-04-04 09:09:53] 2025-04-04 13:09:33,831 | INFO     | 
[2025-04-04 09:09:53] 2025-04-04 13:09:33,847 | INFO     | architecture information:
[2025-04-04 09:09:53] 2025-04-04 13:09:33,852 | INFO     | executing command: cat /etc/os-release
[2025-04-04 09:09:53] 2025-04-04 13:09:33,897 | INFO     | cat /etc/os-release:
[2025-04-04 09:09:53] NAME="CentOS Linux"
[2025-04-04 09:09:53] VERSION="7 (Core)"
[2025-04-04 09:09:53] ID="centos"
[2025-04-04 09:09:53] ID_LIKE="rhel fedora"
[2025-04-04 09:09:53] VERSION_ID="7"
[2025-04-04 09:09:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 09:09:53] ANSI_COLOR="0;31"
[2025-04-04 09:09:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 09:09:53] HOME_URL="https://www.centos.org/"
[2025-04-04 09:09:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 09:09:53] 
[2025-04-04 09:09:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 09:09:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 09:09:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 09:09:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 09:09:53] 
[2025-04-04 09:09:53] 2025-04-04 13:09:33,897 | INFO     | **************************************
[2025-04-04 09:09:53] 2025-04-04 13:09:34,401 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-04 09:09:53] 2025-04-04 13:09:34,588 | INFO     | sufficient remaining disk space (70744276992 B)
[2025-04-04 09:09:53] 2025-04-04 13:09:34,589 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 09:09:53] 2025-04-04 13:09:34,589 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 09:09:53] 2025-04-04 13:09:34,589 | INFO     | update_server=False
[2025-04-04 09:09:53] 2025-04-04 13:09:34,589 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 09:09:53] 2025-04-04 13:09:34,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 09:09:53] 2025-04-04 13:09:34,613 | INFO     | aborting loop
[2025-04-04 09:09:53] 2025-04-04 13:09:34,613 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 09:09:53] 2025-04-04 13:09:34,614 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 09:09:53] 2025-04-04 13:09:34,614 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 09:09:53] 2025-04-04 13:09:34,614 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 09:09:53] 2025-04-04 13:09:34,835 | INFO     | all payload control threads have been joined
[2025-04-04 09:09:53] 2025-04-04 13:09:35,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 09:09:53] 2025-04-04 13:09:35,142 | INFO     | all data control threads have been joined
[2025-04-04 09:09:53] 2025-04-04 13:09:35,243 | INFO     | all job control threads have been joined
[2025-04-04 09:09:53] 2025-04-04 13:09:35,595 | INFO     | [job] retrieve thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:35,620 | INFO     | [job] job monitor thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:35,865 | INFO     | [payload] control thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:36,171 | INFO     | [data] control thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:36,248 | INFO     | [job] control thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:36,654 | INFO     | [payload] validate_post thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:36,723 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:36,798 | INFO     | [job] validate thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:36,955 | INFO     | [payload] failed_post thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:36,978 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:36,992 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:37,010 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 09:09:53] 2025-04-04 13:09:37,011 | INFO     | [data] copytool_in thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:37,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 09:09:53] 2025-04-04 13:09:37,033 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:37,071 | INFO     | [data] copytool_out thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:38,063 | INFO     | [job] queue monitor thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:41,047 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 09:09:53] 2025-04-04 13:09:42,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819136907072)>', '<ExcThread(monitor, started 139818566678272)>']
[2025-04-04 09:09:53] 2025-04-04 13:09:43,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 09:09:53] 2025-04-04 13:09:43,680 | INFO     | [monitor] control thread has ended
[2025-04-04 09:09:53] 2025-04-04 13:09:47,849 | INFO     | all workflow threads have been joined
[2025-04-04 09:09:53] 2025-04-04 13:09:47,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 09:09:53] 2025-04-04 13:09:47,849 | INFO     | traces error code: 0
[2025-04-04 09:09:53] 2025-04-04 13:09:47,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 09:09:53] 2025-04-04 13:09:51,715 [wrapper] ==== pilot stdout END ====
[2025-04-04 09:09:53] 2025-04-04 13:09:51,851 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 09:09:53] 2025-04-04 13:09:51,878 [wrapper] pilotpid: 55965
[2025-04-04 09:09:53] 2025-04-04 13:09:51,924 [wrapper] Pilot exit status: 0
[2025-04-04 09:09:53] 2025-04-04 13:09:52,139 [wrapper] pandaids: 6586399400
[2025-04-04 09:09:53] 2025-04-04 13:09:52,257 [wrapper] cleanup supervisor_pilot 2697895 55966
[2025-04-04 09:09:53] 2025-04-04 13:09:52,291 [wrapper] Test setup, not cleaning
[2025-04-04 09:09:53] 2025-04-04 13:09:52,338 [wrapper] apfmon messages muted
[2025-04-04 09:09:53] 2025-04-04 13:09:52,382 [wrapper] ==== wrapper stdout END ====
[2025-04-04 09:09:53] 2025-04-04 13:09:52,504 [wrapper] ==== wrapper stderr END ====
[2025-04-04 09:09:53]  *** Error codes and diagnostics ***
[2025-04-04 09:09:53]     "exeErrorCode": 0,
[2025-04-04 09:09:53]     "exeErrorDiag": "",
[2025-04-04 09:09:53]     "pilotErrorCode": 0,
[2025-04-04 09:09:53]     "pilotErrorDiag": "",
[2025-04-04 09:09:53]  *** Listing of results directory ***
[2025-04-04 09:09:53] total 675856
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas    503527 Apr  3 03:42 pilot3.tar.gz
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 20:20 queuedata.json
[2025-04-04 09:09:53] -rwx------. 1 boincer umatlas     37140 Apr  3 20:21 runpilot2-wrapper.sh
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas       100 Apr  4 01:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 09:09:53] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 01:00 run_atlas
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas       105 Apr  4 01:00 job.xml
[2025-04-04 09:09:53] -rw-r--r--. 2 boincer umatlas 361580833 Apr  4 01:00 EVNT.43634896._000710.pool.root.1
[2025-04-04 09:09:53] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 01:00 start_atlas.sh
[2025-04-04 09:09:53] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 01:00 shared
[2025-04-04 09:09:53] -rw-r--r--. 2 boincer umatlas    517107 Apr  4 01:00 input.tar.gz
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas         0 Apr  4 01:00 boinc_lockfile
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas      2599 Apr  4 01:00 pandaJob.out
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas       467 Apr  4 01:00 setup.sh.local
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas    979986 Apr  4 01:01 agis_schedconf.cvmfs.json
[2025-04-04 09:09:53] drwx------. 4 boincer umatlas      4096 Apr  4 01:01 pilot3
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas 321318433 Apr  4 09:01 HITS.43634898._019121.pool.root.1
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas       532 Apr  4 09:01 boinc_task_state.xml
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas      6871 Apr  4 09:03 init_data.xml
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas      1057 Apr  4 09:08 memory_monitor_summary.json
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas   1603525 Apr  4 09:08 agis_ddmendpoints.agis.ALL.json
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas    501501 Apr  4 09:08 log.43634898._019121.job.log.tgz.1
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas        95 Apr  4 09:09 pilot_heartbeat.json
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas      7749 Apr  4 09:09 heartbeat.json
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas      4476 Apr  4 09:09 pilotlog.txt
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 09:09 boinc_mmap_file
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas   2162765 Apr  4 09:09 log.43634898._019121.job.log.1
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas        28 Apr  4 09:09 wrapper_checkpoint.txt
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas       357 Apr  4 09:09 output.list
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas       620 Apr  4 09:09 runtime_log
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas   2682880 Apr  4 09:09 result.tar.gz
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas     11419 Apr  4 09:09 runtime_log.err
[2025-04-04 09:09:53] -rw-------. 1 boincer umatlas       663 Apr  4 09:09 eGEODm7yjK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmVOtKDmqha0ym.diag
[2025-04-04 09:09:53] -rw-r--r--. 1 boincer umatlas     20958 Apr  4 09:09 stderr.txt
[2025-04-04 09:09:54] HITS file was successfully produced:
[2025-04-04 09:09:54] -rw-------. 1 boincer umatlas 321318433 Apr  4 09:01 shared/HITS.pool.root.1
[2025-04-04 09:09:54]  *** Contents of shared directory: ***
[2025-04-04 09:09:54] total 670048
[2025-04-04 09:09:54] -rw-r--r--. 2 boincer umatlas 361580833 Apr  4 01:00 ATLAS.root_0
[2025-04-04 09:09:54] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 01:00 start_atlas.sh
[2025-04-04 09:09:54] -rw-r--r--. 2 boincer umatlas    517107 Apr  4 01:00 input.tar.gz
[2025-04-04 09:09:54] -rw-------. 1 boincer umatlas 321318433 Apr  4 09:01 HITS.pool.root.1
[2025-04-04 09:09:54] -rw-------. 1 boincer umatlas   2682880 Apr  4 09:09 result.tar.gz
09:09:55 (46671): run_atlas exited; CPU time 75931.558744
09:09:55 (46671): called boinc_finish(0)

</stderr_txt>
]]>

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