Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:01:42 (2483133): wrapper (7.7.26015): starting
01:01:42 (2483133): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 01:01:42] Arguments: --nthreads 8
[2025-04-04 01:01:42] Threads: 8
[2025-04-04 01:01:42] Checking for CVMFS
[2025-04-04 01:01:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 01:01:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 01:01:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 01:01:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 01:01:47] 2.12.6.0 425763 23781 285024 144477 2 386 25030597 32935936 25245 130560 0 9598111 99.542 9869741 9306 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 01:01:47] CVMFS is ok
[2025-04-04 01:01:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 01:01:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 01:01:47] Further information can be found at the LHC@home message board.
[2025-04-04 01:01:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 01:01:47] Checking for apptainer binary...
[2025-04-04 01:01:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 01:01:47] Running /usr/bin/apptainer --version
[2025-04-04 01:01:47] apptainer version 1.4.0-1.el9
[2025-04-04 01:01:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 01:01:49] c6-12-25-1.aglt2.org
[2025-04-04 01:01:49] apptainer works
[2025-04-04 01:01:49] Set ATHENA_PROC_NUMBER=8
[2025-04-04 01:01:49] Set ATHENA_CORE_NUMBER=8
[2025-04-04 01:01:49] Starting ATLAS job with PandaID=6586399384
[2025-04-04 01:01:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 20:53:41]  *** The last 200 lines of the pilot log: ***
[2025-04-04 20:53:41] 2025-04-05 00:52:55,945 | INFO     | PID=2492365 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-04 20:53:41] 2025-04-05 00:52:55,946 | INFO     | .. there are 21 such processes running
[2025-04-04 20:53:41] 2025-04-05 00:52:56,431 | INFO     | monitor loop #1095: job 0:6586399384 is in state 'finished'
[2025-04-04 20:53:41] 2025-04-05 00:52:56,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 20:53:41] 2025-04-05 00:52:58,948 | INFO     | monitor loop #1096: job 0:6586399384 is in state 'finished'
[2025-04-04 20:53:41] 2025-04-05 00:52:58,948 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 20:53:41] 2025-04-05 00:53:01,459 | INFO     | monitor loop #1097: job 0:6586399384 is in state 'finished'
[2025-04-04 20:53:41] 2025-04-05 00:53:01,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 20:53:41] 2025-04-05 00:53:03,981 | INFO     | monitor loop #1098: job 0:6586399384 is in state 'finished'
[2025-04-04 20:53:41] 2025-04-05 00:53:03,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 20:53:41] 2025-04-05 00:53:06,500 | INFO     | monitor loop #1099: job 0:6586399384 is in state 'finished'
[2025-04-04 20:53:41] 2025-04-05 00:53:06,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 20:53:41] 2025-04-05 00:53:06,652 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-04 20:53:41] 2025-04-05 00:53:06,653 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6586399384/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 20:53:41] 2025-04-05 00:53:06,655 | INFO     | extracted standard info from prmon json
[2025-04-04 20:53:41] 2025-04-05 00:53:06,676 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 20:53:41] 2025-04-05 00:53:06,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 20:53:41] 2025-04-05 00:53:06,677 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 20:53:41] 2025-04-05 00:53:06,678 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 20:53:41] 2025-04-05 00:53:07,050 | INFO     | fitting pss+swap vs Time
[2025-04-04 20:53:41] 2025-04-05 00:53:07,070 | INFO     | sum of square deviations: 490286441018.9561
[2025-04-04 20:53:41] 2025-04-05 00:53:07,692 | INFO     | sum of deviations: 2429915195379.957
[2025-04-04 20:53:41] 2025-04-05 00:53:07,693 | INFO     | mean x: 1743778805.5158799
[2025-04-04 20:53:41] 2025-04-05 00:53:07,693 | INFO     | mean y: 2285044.948497854
[2025-04-04 20:53:41] 2025-04-05 00:53:07,693 | INFO     | -- intersect: -8640080442.65984
[2025-04-04 20:53:41] 2025-04-05 00:53:07,693 | INFO     | intersect: -8640080442.65984
[2025-04-04 20:53:41] 2025-04-05 00:53:07,718 | INFO     | chi2: 21.259838662713815
[2025-04-04 20:53:41] 2025-04-05 00:53:07,750 | INFO     | sum of square deviations: 484001243177.41693
[2025-04-04 20:53:41] 2025-04-05 00:53:08,176 | INFO     | sum of deviations: 2764616072685.7925
[2025-04-04 20:53:41] 2025-04-05 00:53:08,177 | INFO     | mean x: 1743778653.0224137
[2025-04-04 20:53:41] 2025-04-05 00:53:08,177 | INFO     | mean y: 2293165.7387931035
[2025-04-04 20:53:41] 2025-04-05 00:53:08,178 | INFO     | -- intersect: -9958174001.046957
[2025-04-04 20:53:41] 2025-04-05 00:53:08,178 | INFO     | intersect: -9958174001.046957
[2025-04-04 20:53:41] 2025-04-05 00:53:08,201 | INFO     | chi2: 17.77451537677237
[2025-04-04 20:53:41] 2025-04-05 00:53:08,202 | INFO     | current chi2=17.77451537677237 (change=16.39393102288267 %)
[2025-04-04 20:53:41] 2025-04-05 00:53:08,202 | INFO     | right removable region: 1159
[2025-04-04 20:53:41] 2025-04-05 00:53:08,224 | INFO     | sum of square deviations: 484000165917.4175
[2025-04-04 20:53:41] 2025-04-05 00:53:08,765 | INFO     | sum of deviations: 2078414770365.1284
[2025-04-04 20:53:41] 2025-04-05 00:53:08,766 | INFO     | mean x: 1743778958.0224137
[2025-04-04 20:53:41] 2025-04-05 00:53:08,789 | INFO     | mean y: 2293570.1103448276
[2025-04-04 20:53:41] 2025-04-05 00:53:08,789 | INFO     | -- intersect: -7485918620.345998
[2025-04-04 20:53:41] 2025-04-05 00:53:08,789 | INFO     | intersect: -7485918620.345998
[2025-04-04 20:53:41] 2025-04-05 00:53:08,816 | INFO     | chi2: 17.305296952759015
[2025-04-04 20:53:41] 2025-04-05 00:53:08,817 | INFO     | current chi2=17.305296952759015 (change=18.600995862167107 %)
[2025-04-04 20:53:41] 2025-04-05 00:53:08,817 | INFO     | left removable region: 10
[2025-04-04 20:53:41] 2025-04-05 00:53:08,842 | INFO     | sum of square deviations: 470361245797.67834
[2025-04-04 20:53:41] 2025-04-05 00:53:09,202 | INFO     | monitor loop #1100: job 0:6586399384 is in state 'finished'
[2025-04-04 20:53:41] 2025-04-05 00:53:09,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 20:53:41] 2025-04-05 00:53:09,389 | INFO     | sum of deviations: 2182839528072.4363
[2025-04-04 20:53:41] 2025-04-05 00:53:09,390 | INFO     | mean x: 1743778927.5369887
[2025-04-04 20:53:41] 2025-04-05 00:53:09,412 | INFO     | mean y: 2310753.5308964318
[2025-04-04 20:53:41] 2025-04-05 00:53:09,412 | INFO     | -- intersect: -8090170515.397419
[2025-04-04 20:53:41] 2025-04-05 00:53:09,412 | INFO     | intersect: -8090170515.397419
[2025-04-04 20:53:41] 2025-04-05 00:53:09,439 | INFO     | chi2: 10.389321704281956
[2025-04-04 20:53:41] 2025-04-05 00:53:09,440 | INFO     | -- intersect: -8090170515.397419
[2025-04-04 20:53:41] 2025-04-05 00:53:09,440 | INFO     | current memory leak: 4.64 B/s (using 1149 data points, chi2=10.39)
[2025-04-04 20:53:41] 2025-04-05 00:53:09,466 | INFO     | ..............................
[2025-04-04 20:53:41] 2025-04-05 00:53:09,466 | INFO     | . Timing measurements:
[2025-04-04 20:53:41] 2025-04-05 00:53:09,466 | INFO     | . get job = 0 s
[2025-04-04 20:53:41] 2025-04-05 00:53:09,467 | INFO     | . initial setup = 23 s
[2025-04-04 20:53:41] 2025-04-05 00:53:09,467 | INFO     | . payload setup = 80 s
[2025-04-04 20:53:41] 2025-04-05 00:53:09,467 | INFO     | . stage-in = 5 s
[2025-04-04 20:53:41] 2025-04-05 00:53:09,467 | INFO     | . payload execution = 71066 s
[2025-04-04 20:53:41] 2025-04-05 00:53:09,486 | INFO     | . stage-out = 15 s
[2025-04-04 20:53:41] 2025-04-05 00:53:09,486 | INFO     | . log creation = 1 s
[2025-04-04 20:53:41] 2025-04-05 00:53:09,486 | INFO     | ..............................
[2025-04-04 20:53:41] 2025-04-05 00:53:11,765 | INFO     | 
[2025-04-04 20:53:41] 2025-04-05 00:53:11,783 | INFO     | job summary report
[2025-04-04 20:53:41] 2025-04-05 00:53:11,783 | INFO     | --------------------------------------------------
[2025-04-04 20:53:41] 2025-04-05 00:53:11,783 | INFO     | PanDA job id: 6586399384
[2025-04-04 20:53:41] 2025-04-05 00:53:11,783 | INFO     | task id: 43634898
[2025-04-04 20:53:41] 2025-04-05 00:53:11,784 | INFO     | errors: (none)
[2025-04-04 20:53:41] 2025-04-05 00:53:11,784 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 20:53:41] 2025-04-05 00:53:11,784 | INFO     | pilot state: finished 
[2025-04-04 20:53:41] 2025-04-05 00:53:11,784 | INFO     | transexitcode: 0
[2025-04-04 20:53:41] 2025-04-05 00:53:11,784 | INFO     | exeerrorcode: 0
[2025-04-04 20:53:41] 2025-04-05 00:53:11,785 | INFO     | exeerrordiag: 
[2025-04-04 20:53:41] 2025-04-05 00:53:11,785 | INFO     | exitcode: 0
[2025-04-04 20:53:41] 2025-04-05 00:53:11,785 | INFO     | exitmsg: OK
[2025-04-04 20:53:41] 2025-04-05 00:53:11,785 | INFO     | cpuconsumptiontime: 197858 s
[2025-04-04 20:53:41] 2025-04-05 00:53:11,785 | INFO     | nevents: 400
[2025-04-04 20:53:41] 2025-04-05 00:53:11,786 | INFO     | neventsw: 0
[2025-04-04 20:53:41] 2025-04-05 00:53:11,786 | INFO     | pid: 2512286
[2025-04-04 20:53:41] 2025-04-05 00:53:11,786 | INFO     | pgrp: 2512286
[2025-04-04 20:53:41] 2025-04-05 00:53:11,786 | INFO     | corecount: 8
[2025-04-04 20:53:41] 2025-04-05 00:53:11,786 | INFO     | event service: False
[2025-04-04 20:53:41] 2025-04-05 00:53:11,818 | INFO     | sizes: {0: 2416521, 2: 2417122, 3: 2417206, 6: 2417262, 7: 2417461, 19: 2417461, 33: 2417617, 47: 2417673, 66: 2377397, 69: 2417963, 78: 2417991, 71149: 2452823, 7
[2025-04-04 20:53:41] 2025-04-05 00:53:12,012 | INFO     | --------------------------------------------------
[2025-04-04 20:53:41] 2025-04-05 00:53:12,012 | INFO     | 
[2025-04-04 20:53:41] 2025-04-05 00:53:12,013 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-04-04 20:53:41] 2025-04-05 00:53:12,439 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,440 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,440 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,440 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,440 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 20:53:41] 2025-04-05 00:53:12,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,465 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 20:53:41] 2025-04-05 00:53:12,466 | INFO     | job 6586399384 has completed (purged errors)
[2025-04-04 20:53:41] 2025-04-05 00:53:12,466 | INFO     | overall cleanup function is called
[2025-04-04 20:53:41] 2025-04-05 00:53:13,547 | INFO     | --- collectZombieJob: --- 10, [2512286]
[2025-04-04 20:53:41] 2025-04-05 00:53:13,547 | INFO     | zombie collector waiting for pid 2512286
[2025-04-04 20:53:41] 2025-04-05 00:53:13,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 20:53:41] 2025-04-05 00:53:13,552 | INFO     | collected zombie processes
[2025-04-04 20:53:41] 2025-04-05 00:53:13,552 | INFO     | will attempt to kill all subprocesses of pid=2512286
[2025-04-04 20:53:41] 2025-04-05 00:53:22,421 | INFO     | process IDs to be killed: [2512286] (in reverse order)
[2025-04-04 20:53:41] 2025-04-05 00:53:22,864 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 20:53:41] 2025-04-05 00:53:22,865 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 20:53:41] 2025-04-05 00:53:23,092 | INFO     | did not find any defunct processes belonging to 2512286
[2025-04-04 20:53:41] 2025-04-05 00:53:23,559 | INFO     | did not find any defunct processes belonging to 2512286
[2025-04-04 20:53:41] 2025-04-05 00:53:23,559 | INFO     | ready for new job
[2025-04-04 20:53:41] 2025-04-05 00:53:23,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 20:53:41] 2025-04-05 00:53:23,630 | INFO     | **************************************
[2025-04-04 20:53:41] 2025-04-05 00:53:23,630 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 20:53:41] 2025-04-05 00:53:23,631 | INFO     | **************************************
[2025-04-04 20:53:41] 2025-04-05 00:53:23,631 | INFO     | 
[2025-04-04 20:53:41] 2025-04-05 00:53:23,932 | INFO     | architecture information:
[2025-04-04 20:53:41] 2025-04-05 00:53:24,029 | INFO     | executing command: cat /etc/os-release
[2025-04-04 20:53:41] 2025-04-05 00:53:24,224 | INFO     | cat /etc/os-release:
[2025-04-04 20:53:41] NAME="CentOS Linux"
[2025-04-04 20:53:41] VERSION="7 (Core)"
[2025-04-04 20:53:41] ID="centos"
[2025-04-04 20:53:41] ID_LIKE="rhel fedora"
[2025-04-04 20:53:41] VERSION_ID="7"
[2025-04-04 20:53:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 20:53:41] ANSI_COLOR="0;31"
[2025-04-04 20:53:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 20:53:41] HOME_URL="https://www.centos.org/"
[2025-04-04 20:53:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 20:53:41] 
[2025-04-04 20:53:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 20:53:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 20:53:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 20:53:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 20:53:41] 
[2025-04-04 20:53:41] 2025-04-05 00:53:24,225 | INFO     | **************************************
[2025-04-04 20:53:41] 2025-04-05 00:53:24,729 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-04-04 20:53:41] 2025-04-05 00:53:24,930 | INFO     | sufficient remaining disk space (74150051840 B)
[2025-04-04 20:53:41] 2025-04-05 00:53:24,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 20:53:41] 2025-04-05 00:53:24,931 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 20:53:41] 2025-04-05 00:53:24,931 | INFO     | update_server=False
[2025-04-04 20:53:41] 2025-04-05 00:53:24,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 20:53:41] 2025-04-05 00:53:24,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 20:53:41] 2025-04-05 00:53:24,949 | INFO     | all data control threads have been joined
[2025-04-04 20:53:41] 2025-04-05 00:53:24,955 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 20:53:41] 2025-04-05 00:53:25,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 20:53:41] 2025-04-05 00:53:25,630 | INFO     | aborting loop
[2025-04-04 20:53:41] 2025-04-05 00:53:25,942 | INFO     | [job] retrieve thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:25,956 | INFO     | [data] control thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:25,962 | INFO     | [job] queue monitor thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:26,059 | INFO     | all job control threads have been joined
[2025-04-04 20:53:41] 2025-04-05 00:53:26,465 | INFO     | [data] copytool_in thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:26,579 | INFO     | all payload control threads have been joined
[2025-04-04 20:53:41] 2025-04-05 00:53:26,640 | INFO     | [job] job monitor thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:26,648 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:26,682 | INFO     | [payload] validate_post thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:26,690 | INFO     | [payload] failed_post thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:26,718 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:26,979 | INFO     | [data] copytool_out thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:27,116 | INFO     | [job] control thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:27,126 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:27,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 20:53:41] 2025-04-05 00:53:27,432 | INFO     | [job] validate thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:27,437 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:27,585 | INFO     | [payload] control thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:29,304 | INFO     | PID=2492365 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-04 20:53:41] 2025-04-05 00:53:29,323 | INFO     | .. there are 21 such processes running
[2025-04-04 20:53:41] 2025-04-05 00:53:29,323 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 20:53:41] 2025-04-05 00:53:29,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 20:53:41] 2025-04-05 00:53:29,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 20:53:41] 2025-04-05 00:53:31,242 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 20:53:41] 2025-04-05 00:53:32,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139933883340608)>', '<ExcThread(monitor, started 139933079545600)>']
[2025-04-04 20:53:41] 2025-04-05 00:53:33,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 20:53:41] 2025-04-05 00:53:33,350 | INFO     | [monitor] control thread has ended
[2025-04-04 20:53:41] 2025-04-05 00:53:38,026 | INFO     | all workflow threads have been joined
[2025-04-04 20:53:41] 2025-04-05 00:53:38,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 20:53:41] 2025-04-05 00:53:38,027 | INFO     | traces error code: 0
[2025-04-04 20:53:41] 2025-04-05 00:53:38,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 20:53:41] 2025-04-05 00:53:40,138 [wrapper] ==== pilot stdout END ====
[2025-04-04 20:53:41] 2025-04-05 00:53:40,183 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 20:53:41] 2025-04-05 00:53:40,244 [wrapper] pilotpid: 2492365
[2025-04-04 20:53:41] 2025-04-05 00:53:40,279 [wrapper] Pilot exit status: 0
[2025-04-04 20:53:41] 2025-04-05 00:53:40,515 [wrapper] pandaids: 6586399384
[2025-04-04 20:53:41] 2025-04-05 00:53:41,008 [wrapper] cleanup supervisor_pilot 2400516 2492366
[2025-04-04 20:53:41] 2025-04-05 00:53:41,016 [wrapper] Test setup, not cleaning
[2025-04-04 20:53:41] 2025-04-05 00:53:41,023 [wrapper] apfmon messages muted
[2025-04-04 20:53:41] 2025-04-05 00:53:41,029 [wrapper] ==== wrapper stdout END ====
[2025-04-04 20:53:41] 2025-04-05 00:53:41,035 [wrapper] ==== wrapper stderr END ====
[2025-04-04 20:53:41]  *** Error codes and diagnostics ***
[2025-04-04 20:53:41]     "exeErrorCode": 0,
[2025-04-04 20:53:41]     "exeErrorDiag": "",
[2025-04-04 20:53:41]     "pilotErrorCode": 0,
[2025-04-04 20:53:41]     "pilotErrorDiag": "",
[2025-04-04 20:53:41]  *** Listing of results directory ***
[2025-04-04 20:53:41] total 667832
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 20:15 pilot3.tar.gz
[2025-04-04 20:53:41] -rwx------. 1 boincer umatlas     37140 Apr  3 20:19 runpilot2-wrapper.sh
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 20:19 queuedata.json
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas       100 Apr  4 01:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 20:53:41] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 01:01 run_atlas
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas       105 Apr  4 01:01 job.xml
[2025-04-04 20:53:41] -rw-r--r--. 2 boincer umatlas 357685241 Apr  4 01:01 EVNT.43634896._000709.pool.root.1
[2025-04-04 20:53:41] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 01:01 start_atlas.sh
[2025-04-04 20:53:41] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 01:01 shared
[2025-04-04 20:53:41] -rw-r--r--. 2 boincer umatlas    508888 Apr  4 01:01 input.tar.gz
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas         0 Apr  4 01:01 boinc_lockfile
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas      2599 Apr  4 01:01 pandaJob.out
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas       467 Apr  4 01:01 setup.sh.local
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas    979986 Apr  4 01:03 agis_schedconf.cvmfs.json
[2025-04-04 20:53:41] drwx------. 4 boincer umatlas      4096 Apr  4 01:03 pilot3
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas 316646057 Apr  4 20:45 HITS.43634898._019105.pool.root.1
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas       533 Apr  4 20:45 boinc_task_state.xml
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas      6857 Apr  4 20:49 init_data.xml
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas      1054 Apr  4 20:51 memory_monitor_summary.json
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas   1603525 Apr  4 20:52 agis_ddmendpoints.agis.ALL.json
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas    592884 Apr  4 20:52 log.43634898._019105.job.log.tgz.1
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas        95 Apr  4 20:52 pilot_heartbeat.json
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas      7759 Apr  4 20:53 heartbeat.json
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 20:53 boinc_mmap_file
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas        29 Apr  4 20:53 wrapper_checkpoint.txt
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas      4749 Apr  4 20:53 pilotlog.txt
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas   2251677 Apr  4 20:53 log.43634898._019105.job.log.1
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas       357 Apr  4 20:53 output.list
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas       620 Apr  4 20:53 runtime_log
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas   2867200 Apr  4 20:53 result.tar.gz
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas       665 Apr  4 20:53 6CMKDmBxjK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDJILDmHViBym.diag
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas     11429 Apr  4 20:53 runtime_log.err
[2025-04-04 20:53:41] -rw-r--r--. 1 boincer umatlas     21623 Apr  4 20:53 stderr.txt
[2025-04-04 20:53:41] HITS file was successfully produced:
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas 316646057 Apr  4 20:45 shared/HITS.pool.root.1
[2025-04-04 20:53:41]  *** Contents of shared directory: ***
[2025-04-04 20:53:41] total 661856
[2025-04-04 20:53:41] -rw-r--r--. 2 boincer umatlas 357685241 Apr  4 01:01 ATLAS.root_0
[2025-04-04 20:53:41] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 01:01 start_atlas.sh
[2025-04-04 20:53:41] -rw-r--r--. 2 boincer umatlas    508888 Apr  4 01:01 input.tar.gz
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas 316646057 Apr  4 20:45 HITS.pool.root.1
[2025-04-04 20:53:41] -rw-------. 1 boincer umatlas   2867200 Apr  4 20:53 result.tar.gz
20:53:43 (2483133): run_atlas exited; CPU time 201488.435501
20:53:43 (2483133): called boinc_finish(0)

</stderr_txt>
]]>

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