Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:32:09 (3793966): wrapper (7.7.26015): starting
22:32:09 (3793966): wrapper: running run_atlas (--nthreads 12)
[2025-04-05 22:32:09] Arguments: --nthreads 12
[2025-04-05 22:32:09] Threads: 12
[2025-04-05 22:32:09] Checking for CVMFS
[2025-04-05 22:32:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-05 22:32:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-05 22:32:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-05 22:32:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-05 22:32:09] 2.12.7.0 3477254 953 62044 144543 1 56 2331830 4096001 0 130560 0 861019 99.991 281545 1911 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-05 22:32:09] CVMFS is ok
[2025-04-05 22:32:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-05 22:32:09] Checking for apptainer binary...
[2025-04-05 22:32:09] apptainer is not installed, using version from CVMFS
[2025-04-05 22:32:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-05 22:32:10] ryzen7
[2025-04-05 22:32:10] apptainer works
[2025-04-05 22:32:10] Set ATHENA_PROC_NUMBER=12
[2025-04-05 22:32:10] Set ATHENA_CORE_NUMBER=12
[2025-04-05 22:32:10] Starting ATLAS job with PandaID=6586399167
[2025-04-05 22:32:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-05 23:53:00]  *** The last 200 lines of the pilot log: ***
[2025-04-05 23:53:00]  protocol_id=None
[2025-04-05 23:53:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-05 23:53:00]  replicas=None
[2025-04-05 23:53:00]  scope=mc23_13p6TeV
[2025-04-05 23:53:00]  status=None
[2025-04-05 23:53:00]  status_code=0
[2025-04-05 23:53:00]  storage_token=
[2025-04-05 23:53:00]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586399167/log.43634898._019074.job.log.tgz.1
[2025-04-05 23:53:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/cc/log.43634898._019074.job.log.tgz.1
[2025-04-05 23:53:00]  workdir=None
[2025-04-05 23:53:00] ]
[2025-04-05 23:53:00] 2025-04-05 23:52:35,794 | INFO     | transferring file log.43634898._019074.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586399167/log.43634898._019074.job.log.tgz.1 t
[2025-04-05 23:53:00] 2025-04-05 23:52:35,794 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586399167/log.43634898._019074.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-05 23:53:00] 2025-04-05 23:52:35,805 | INFO     | adding to output.list: log.43634898._019074.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/cc/log.43634898._019074.job.log.tg
[2025-04-05 23:53:00] 2025-04-05 23:52:35,806 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-05 23:53:00] 2025-04-05 23:52:35,806 | INFO     | summary of transferred files:
[2025-04-05 23:53:00] 2025-04-05 23:52:35,806 | INFO     |  -- lfn=log.43634898._019074.job.log.tgz.1, status_code=0, status=transferred
[2025-04-05 23:53:00] 2025-04-05 23:52:35,806 | INFO     | stage-out finished correctly
[2025-04-05 23:53:00] 2025-04-05 23:52:36,878 | INFO     | monitor loop #360: job 0:6586399167 is in state 'finished'
[2025-04-05 23:53:00] 2025-04-05 23:52:36,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 23:53:00] 2025-04-05 23:52:38,454 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-05 23:53:00] 2025-04-05 23:52:39,381 | INFO     | monitor loop #361: job 0:6586399167 is in state 'finished'
[2025-04-05 23:53:00] 2025-04-05 23:52:39,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 23:53:00] 2025-04-05 23:52:40,038 | INFO     | job 6586399167 has state=finished
[2025-04-05 23:53:00] 2025-04-05 23:52:40,038 | INFO     | preparing for final server update for job 6586399167 in state='finished'
[2025-04-05 23:53:00] 2025-04-05 23:52:40,767 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-05 23:53:00] 2025-04-05 23:52:40,767 | INFO     | this job has now completed (state=finished)
[2025-04-05 23:53:00] 2025-04-05 23:52:40,767 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-05 23:53:00] 2025-04-05 23:52:40,767 | INFO     | log transfer has been attempted: DONE
[2025-04-05 23:53:00] 2025-04-05 23:52:40,767 | INFO     | job 6586399167 has finished - writing final server update
[2025-04-05 23:53:00] 2025-04-05 23:52:40,767 | INFO     | total number of processed events: 400 (read)
[2025-04-05 23:53:00] 2025-04-05 23:52:40,787 | INFO     | executing command: lscpu
[2025-04-05 23:53:00] 2025-04-05 23:52:40,802 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-05 23:53:00] 2025-04-05 23:52:41,884 | INFO     | monitor loop #362: job 0:6586399167 is in state 'finished'
[2025-04-05 23:53:00] 2025-04-05 23:52:41,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 23:53:00] 2025-04-05 23:52:42,718 | INFO     | PID=3797671 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-05 23:53:00] 2025-04-05 23:52:44,390 | INFO     | monitor loop #363: job 0:6586399167 is in state 'finished'
[2025-04-05 23:53:00] 2025-04-05 23:52:44,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 23:53:00] 2025-04-05 23:52:46,840 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-05 23:53:00] 2025-04-05 23:52:46,841 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586399167/memory_monitor_summary.json (trf name=prmon)
[2025-04-05 23:53:00] 2025-04-05 23:52:46,841 | INFO     | extracted standard info from prmon json
[2025-04-05 23:53:00] 2025-04-05 23:52:46,841 | INFO     | extracted standard memory fields from prmon json
[2025-04-05 23:53:00] 2025-04-05 23:52:46,841 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-05 23:53:00] 2025-04-05 23:52:46,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-05 23:53:00] 2025-04-05 23:52:46,841 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-05 23:53:00] 2025-04-05 23:52:46,842 | INFO     | fitting pss+swap vs Time
[2025-04-05 23:53:00] 2025-04-05 23:52:46,843 | INFO     | sum of square deviations: 115715658.0
[2025-04-05 23:53:00] 2025-04-05 23:52:46,843 | INFO     | sum of deviations: 7022576779.5
[2025-04-05 23:53:00] 2025-04-05 23:52:46,843 | INFO     | mean x: 1743894837.5
[2025-04-05 23:53:00] 2025-04-05 23:52:46,843 | INFO     | mean y: 2852159.375
[2025-04-05 23:53:00] 2025-04-05 23:52:46,843 | INFO     | -- intersect: -105831013398.53789
[2025-04-05 23:53:00] 2025-04-05 23:52:46,843 | INFO     | intersect: -105831013398.53789
[2025-04-05 23:53:00] 2025-04-05 23:52:46,843 | INFO     | chi2: 1.8210145201675836
[2025-04-05 23:53:00] 2025-04-05 23:52:46,843 | INFO     | -- intersect: -105831013398.53789
[2025-04-05 23:53:00] 2025-04-05 23:52:46,843 | INFO     | current memory leak: 60.69 B/s (using 72 data points, chi2=1.82)
[2025-04-05 23:53:00] 2025-04-05 23:52:46,844 | INFO     | ..............................
[2025-04-05 23:53:00] 2025-04-05 23:52:46,844 | INFO     | . Timing measurements:
[2025-04-05 23:53:00] 2025-04-05 23:52:46,844 | INFO     | . get job = 0 s
[2025-04-05 23:53:00] 2025-04-05 23:52:46,844 | INFO     | . initial setup = 1 s
[2025-04-05 23:53:00] 2025-04-05 23:52:46,844 | INFO     | . payload setup = 5 s
[2025-04-05 23:53:00] 2025-04-05 23:52:46,844 | INFO     | . stage-in = 0 s
[2025-04-05 23:53:00] 2025-04-05 23:52:46,844 | INFO     | . payload execution = 4792 s
[2025-04-05 23:53:00] 2025-04-05 23:52:46,844 | INFO     | . stage-out = 0 s
[2025-04-05 23:53:00] 2025-04-05 23:52:46,844 | INFO     | . log creation = 0 s
[2025-04-05 23:53:00] 2025-04-05 23:52:46,844 | INFO     | ..............................
[2025-04-05 23:53:00] 2025-04-05 23:52:47,236 | INFO     | 
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | job summary report
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | --------------------------------------------------
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | PanDA job id: 6586399167
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | task id: 43634898
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | errors: (none)
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | pilot state: finished 
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | transexitcode: 0
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | exeerrorcode: 0
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | exeerrordiag: 
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | exitcode: 0
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | exitmsg: OK
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | cpuconsumptiontime: 43186 s
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | nevents: 400
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | neventsw: 0
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | pid: 3804205
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | pgrp: 3804205
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | corecount: 12
[2025-04-05 23:53:00] 2025-04-05 23:52:47,237 | INFO     | event service: False
[2025-04-05 23:53:00] 2025-04-05 23:52:47,238 | INFO     | sizes: {0: 2417422, 4: 2417628, 11: 2417656, 4801: 2452718, 4804: 2452718, 4813: 2452888}
[2025-04-05 23:53:00] 2025-04-05 23:52:47,238 | INFO     | --------------------------------------------------
[2025-04-05 23:53:00] 2025-04-05 23:52:47,238 | INFO     | 
[2025-04-05 23:53:00] 2025-04-05 23:52:47,238 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-05 23:53:00] 2025-04-05 23:52:47,248 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-05 23:53:00] 2025-04-05 23:52:47,249 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,250 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-05 23:53:00] 2025-04-05 23:52:47,250 | INFO     | job 6586399167 has completed (purged errors)
[2025-04-05 23:53:00] 2025-04-05 23:52:47,250 | INFO     | overall cleanup function is called
[2025-04-05 23:53:00] 2025-04-05 23:52:48,254 | INFO     | --- collectZombieJob: --- 10, [3804205]
[2025-04-05 23:53:00] 2025-04-05 23:52:48,254 | INFO     | zombie collector waiting for pid 3804205
[2025-04-05 23:53:00] 2025-04-05 23:52:48,254 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-05 23:53:00] 2025-04-05 23:52:48,254 | INFO     | collected zombie processes
[2025-04-05 23:53:00] 2025-04-05 23:52:48,254 | INFO     | will attempt to kill all subprocesses of pid=3804205
[2025-04-05 23:53:00] 2025-04-05 23:52:48,333 | INFO     | process IDs to be killed: [3804205] (in reverse order)
[2025-04-05 23:53:00] 2025-04-05 23:52:48,369 | WARNING  | found no corresponding commands to process id(s)
[2025-04-05 23:53:00] 2025-04-05 23:52:48,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-05 23:53:00] 2025-04-05 23:52:48,371 | INFO     | did not find any defunct processes belonging to 3804205
[2025-04-05 23:53:00] 2025-04-05 23:52:48,373 | INFO     | did not find any defunct processes belonging to 3804205
[2025-04-05 23:53:00] 2025-04-05 23:52:48,373 | INFO     | ready for new job
[2025-04-05 23:53:00] 2025-04-05 23:52:48,373 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-05 23:53:00] 2025-04-05 23:52:48,374 | INFO     | **************************************
[2025-04-05 23:53:00] 2025-04-05 23:52:48,374 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-05 23:53:00] 2025-04-05 23:52:48,374 | INFO     | **************************************
[2025-04-05 23:53:00] 2025-04-05 23:52:48,374 | INFO     | 
[2025-04-05 23:53:00] 2025-04-05 23:52:48,395 | INFO     | architecture information:
[2025-04-05 23:53:00] 2025-04-05 23:52:48,395 | INFO     | executing command: cat /etc/os-release
[2025-04-05 23:53:00] 2025-04-05 23:52:48,400 | INFO     | cat /etc/os-release:
[2025-04-05 23:53:00] NAME="CentOS Linux"
[2025-04-05 23:53:00] VERSION="7 (Core)"
[2025-04-05 23:53:00] ID="centos"
[2025-04-05 23:53:00] ID_LIKE="rhel fedora"
[2025-04-05 23:53:00] VERSION_ID="7"
[2025-04-05 23:53:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-05 23:53:00] ANSI_COLOR="0;31"
[2025-04-05 23:53:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-05 23:53:00] HOME_URL="https://www.centos.org/"
[2025-04-05 23:53:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-05 23:53:00] 
[2025-04-05 23:53:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-05 23:53:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-05 23:53:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-05 23:53:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-05 23:53:00] 
[2025-04-05 23:53:00] 2025-04-05 23:52:48,401 | INFO     | **************************************
[2025-04-05 23:53:00] 2025-04-05 23:52:48,902 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-05 23:53:00] 2025-04-05 23:52:48,909 | INFO     | sufficient remaining disk space (174631944192 B)
[2025-04-05 23:53:00] 2025-04-05 23:52:48,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-05 23:53:00] 2025-04-05 23:52:48,910 | INFO     | current server update state: UPDATING_FINAL
[2025-04-05 23:53:00] 2025-04-05 23:52:48,910 | INFO     | update_server=False
[2025-04-05 23:53:00] 2025-04-05 23:52:48,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-05 23:53:00] 2025-04-05 23:52:48,910 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-05 23:53:00] 2025-04-05 23:52:48,910 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-05 23:53:00] 2025-04-05 23:52:48,910 | INFO     | found 0 job(s) in 20 queues
[2025-04-05 23:53:00] 2025-04-05 23:52:48,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-05 23:53:00] 2025-04-05 23:52:48,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-05 23:53:00] 2025-04-05 23:52:49,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-05 23:53:00] 2025-04-05 23:52:49,374 | INFO     | all data control threads have been joined
[2025-04-05 23:53:00] 2025-04-05 23:52:49,398 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-05 23:53:00] 2025-04-05 23:52:49,398 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-05 23:53:00] 2025-04-05 23:52:49,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-05 23:53:00] 2025-04-05 23:52:49,398 | INFO     | will abort loop
[2025-04-05 23:53:00] 2025-04-05 23:52:49,804 | INFO     | all payload control threads have been joined
[2025-04-05 23:53:00] 2025-04-05 23:52:49,914 | INFO     | [job] retrieve thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:49,946 | INFO     | [payload] failed_post thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:50,050 | INFO     | [data] copytool_in thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:50,050 | INFO     | [payload] validate_pre thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:50,098 | INFO     | [job] create_data_payload thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:50,378 | INFO     | [data] control thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:50,382 | INFO     | [payload] validate_post thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:50,402 | INFO     | [job] job monitor thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:50,578 | INFO     | all job control threads have been joined
[2025-04-05 23:53:00] 2025-04-05 23:52:50,806 | INFO     | [payload] control thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:50,906 | INFO     | [payload] execute_payloads thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:50,914 | INFO     | [data] copytool_out thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:50,998 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:51,098 | INFO     | [job] validate thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:51,582 | INFO     | [job] control thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:51,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-05 23:53:00] 2025-04-05 23:52:52,914 | INFO     | [job] queue monitor thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:53,022 | INFO     | [data] queue_monitor thread has finished
[2025-04-05 23:53:00] 2025-04-05 23:52:54,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943629604672)>', '<ExcThread(monitor, started 139942911010560)>']
[2025-04-05 23:53:00] 2025-04-05 23:52:55,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-05 23:53:00] 2025-04-05 23:52:55,938 | INFO     | [monitor] control thread has ended
[2025-04-05 23:53:00] 2025-04-05 23:53:00,006 | INFO     | all workflow threads have been joined
[2025-04-05 23:53:00] 2025-04-05 23:53:00,006 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-05 23:53:00] 2025-04-05 23:53:00,006 | INFO     | traces error code: 0
[2025-04-05 23:53:00] 2025-04-05 23:53:00,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-05 23:53:00] 2025-04-05 23:53:00,064 [wrapper] ==== pilot stdout END ====
[2025-04-05 23:53:00] 2025-04-05 23:53:00,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-05 23:53:00] 2025-04-05 23:53:00,068 [wrapper] pilotpid: 3797671
[2025-04-05 23:53:00] 2025-04-05 23:53:00,075 [wrapper] Pilot exit status: 0
[2025-04-05 23:53:00] 2025-04-05 23:53:00,089 [wrapper] pandaids: 6586399167
[2025-04-05 23:53:00] 2025-04-05 23:53:00,107 [wrapper] cleanup supervisor_pilot 3816021 3797672
[2025-04-05 23:53:00] 2025-04-05 23:53:00,108 [wrapper] Test setup, not cleaning
[2025-04-05 23:53:00] 2025-04-05 23:53:00,110 [wrapper] apfmon messages muted
[2025-04-05 23:53:00] 2025-04-05 23:53:00,111 [wrapper] ==== wrapper stdout END ====
[2025-04-05 23:53:00] 2025-04-05 23:53:00,113 [wrapper] ==== wrapper stderr END ====
[2025-04-05 23:53:00]  *** Error codes and diagnostics ***
[2025-04-05 23:53:00]     "exeErrorCode": 0,
[2025-04-05 23:53:00]     "exeErrorDiag": "",
[2025-04-05 23:53:00]     "pilotErrorCode": 0,
[2025-04-05 23:53:00]     "pilotErrorDiag": "",
[2025-04-05 23:53:00]  *** Listing of results directory ***
[2025-04-05 23:53:00] total 670424
[2025-04-05 23:53:00] -rw-r--r-- 1 boinc boinc    495897 Apr  3 23:51 pilot3.tar.gz
[2025-04-05 23:53:00] -rw-r--r-- 1 boinc boinc      5111 Apr  4 00:13 queuedata.json
[2025-04-05 23:53:00] -rwx------ 1 boinc boinc     37140 Apr  4 00:15 runpilot2-wrapper.sh
[2025-04-05 23:53:00] -rw-rw-r-- 1 boinc boinc       100 Apr  5 22:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-05 23:53:00] -rwxr-xr-x 1 boinc boinc      7986 Apr  5 22:32 run_atlas
[2025-04-05 23:53:00] -rw-rw-r-- 1 boinc boinc       105 Apr  5 22:32 job.xml
[2025-04-05 23:53:00] -rw-r--r-- 2 boinc boinc     17569 Apr  5 22:32 start_atlas.sh
[2025-04-05 23:53:00] drwxrwx--x 2 boinc boinc      4096 Apr  5 22:32 shared
[2025-04-05 23:53:00] -rw-r--r-- 2 boinc boinc    508887 Apr  5 22:32 input.tar.gz
[2025-04-05 23:53:00] -rw-rw-r-- 1 boinc boinc      9677 Apr  5 22:32 init_data.xml
[2025-04-05 23:53:00] -rw-r--r-- 2 boinc boinc 360600235 Apr  5 22:32 EVNT.43634896._000708.pool.root.1
[2025-04-05 23:53:00] -rw-rw-r-- 1 boinc boinc         0 Apr  5 22:32 boinc_lockfile
[2025-04-05 23:53:00] -rw-rw-r-- 1 boinc boinc      2599 Apr  5 22:32 pandaJob.out
[2025-04-05 23:53:00] -rw------- 1 boinc boinc       424 Apr  5 22:32 setup.sh.local
[2025-04-05 23:53:00] -rw------- 1 boinc boinc    980067 Apr  5 22:32 agis_schedconf.cvmfs.json
[2025-04-05 23:53:00] -rw------- 1 boinc boinc   1603525 Apr  5 22:32 agis_ddmendpoints.agis.ALL.json
[2025-04-05 23:53:00] drwx------ 4 boinc boinc      4096 Apr  5 22:32 pilot3
[2025-04-05 23:53:00] -rw------- 1 boinc boinc 320398437 Apr  5 23:52 HITS.43634898._019074.pool.root.1
[2025-04-05 23:53:00] -rw------- 1 boinc boinc        95 Apr  5 23:52 pilot_heartbeat.json
[2025-04-05 23:53:00] -rw-rw-r-- 1 boinc boinc       530 Apr  5 23:52 boinc_task_state.xml
[2025-04-05 23:53:00] -rw------- 1 boinc boinc      1017 Apr  5 23:52 memory_monitor_summary.json
[2025-04-05 23:53:00] -rw------- 1 boinc boinc    357256 Apr  5 23:52 log.43634898._019074.job.log.tgz.1
[2025-04-05 23:53:00] -rw------- 1 boinc boinc      7650 Apr  5 23:52 heartbeat.json
[2025-04-05 23:53:00] -rw-rw-r-- 1 boinc boinc      8192 Apr  5 23:52 boinc_mmap_file
[2025-04-05 23:53:00] -rw-rw-r-- 1 boinc boinc        27 Apr  5 23:52 wrapper_checkpoint.txt
[2025-04-05 23:53:00] -rw------- 1 boinc boinc      4686 Apr  5 23:53 pilotlog.txt
[2025-04-05 23:53:00] -rw------- 1 boinc boinc    478963 Apr  5 23:53 log.43634898._019074.job.log.1
[2025-04-05 23:53:00] -rw------- 1 boinc boinc       357 Apr  5 23:53 output.list
[2025-04-05 23:53:00] -rw-rw-r-- 1 boinc boinc       620 Apr  5 23:53 runtime_log
[2025-04-05 23:53:00] -rw------- 1 boinc boinc    849920 Apr  5 23:53 result.tar.gz
[2025-04-05 23:53:00] -rw-rw-r-- 1 boinc boinc     11399 Apr  5 23:53 runtime_log.err
[2025-04-05 23:53:00] -rw------- 1 boinc boinc       648 Apr  5 23:53 0fBMDmatjK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmiIILDmbneFMo.diag
[2025-04-05 23:53:00] -rw-rw-r-- 1 boinc boinc     21640 Apr  5 23:53 stderr.txt
[2025-04-05 23:53:00] HITS file was successfully produced:
[2025-04-05 23:53:00] -rw------- 1 boinc boinc 320398437 Apr  5 23:52 shared/HITS.pool.root.1
[2025-04-05 23:53:00]  *** Contents of shared directory: ***
[2025-04-05 23:53:00] total 666404
[2025-04-05 23:53:00] -rw-r--r-- 2 boinc boinc     17569 Apr  5 22:32 start_atlas.sh
[2025-04-05 23:53:00] -rw-r--r-- 2 boinc boinc    508887 Apr  5 22:32 input.tar.gz
[2025-04-05 23:53:00] -rw-r--r-- 2 boinc boinc 360600235 Apr  5 22:32 ATLAS.root_0
[2025-04-05 23:53:00] -rw------- 1 boinc boinc 320398437 Apr  5 23:52 HITS.pool.root.1
[2025-04-05 23:53:00] -rw------- 1 boinc boinc    849920 Apr  5 23:53 result.tar.gz
23:53:01 (3793966): run_atlas exited; CPU time 43215.726114
23:53:01 (3793966): called boinc_finish(0)

</stderr_txt>
]]>

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