Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:50:27 (3744898): wrapper (7.7.26015): starting
19:50:27 (3744898): wrapper: running run_atlas (--nthreads 12)
[2025-04-05 19:50:27] Arguments: --nthreads 12
[2025-04-05 19:50:27] Threads: 12
[2025-04-05 19:50:27] Checking for CVMFS
[2025-04-05 19:50:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-05 19:50:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-05 19:50:27] Running cvmfs_config stat atlas.cern.ch
[2025-04-05 19:50:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-05 19:50:27] 2.12.7.0 3477254 791 60956 144538 3 56 2152040 4096001 0 130560 0 731866 99.991 213523 1654 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-05 19:50:27] CVMFS is ok
[2025-04-05 19:50:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-05 19:50:27] Checking for apptainer binary...
[2025-04-05 19:50:27] apptainer is not installed, using version from CVMFS
[2025-04-05 19:50:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-05 19:50:27] ryzen7
[2025-04-05 19:50:27] apptainer works
[2025-04-05 19:50:27] Set ATHENA_PROC_NUMBER=12
[2025-04-05 19:50:27] Set ATHENA_CORE_NUMBER=12
[2025-04-05 19:50:27] Starting ATLAS job with PandaID=6586322034
[2025-04-05 19:50:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-05 21:11:29]  *** The last 200 lines of the pilot log: ***
[2025-04-05 21:11:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-05 21:11:29]  replicas=None
[2025-04-05 21:11:29]  scope=mc23_13p6TeV
[2025-04-05 21:11:29]  status=None
[2025-04-05 21:11:29]  status_code=0
[2025-04-05 21:11:29]  storage_token=
[2025-04-05 21:11:29]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586322034/log.43634898._016958.job.log.tgz.1
[2025-04-05 21:11:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/6e/log.43634898._016958.job.log.tgz.1
[2025-04-05 21:11:29]  workdir=None
[2025-04-05 21:11:29] ]
[2025-04-05 21:11:29] 2025-04-05 21:11:00,492 | INFO     | transferring file log.43634898._016958.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586322034/log.43634898._016958.job.log.tgz.1 t
[2025-04-05 21:11:29] 2025-04-05 21:11:00,492 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586322034/log.43634898._016958.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-05 21:11:29] 2025-04-05 21:11:00,501 | INFO     | adding to output.list: log.43634898._016958.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/6e/log.43634898._016958.job.log.tg
[2025-04-05 21:11:29] 2025-04-05 21:11:00,501 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-05 21:11:29] 2025-04-05 21:11:00,502 | INFO     | summary of transferred files:
[2025-04-05 21:11:29] 2025-04-05 21:11:00,502 | INFO     |  -- lfn=log.43634898._016958.job.log.tgz.1, status_code=0, status=transferred
[2025-04-05 21:11:29] 2025-04-05 21:11:00,502 | INFO     | stage-out finished correctly
[2025-04-05 21:11:29] 2025-04-05 21:11:00,553 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-05 21:11:29] 2025-04-05 21:11:00,603 | INFO     | job 6586322034 has state=finished
[2025-04-05 21:11:29] 2025-04-05 21:11:00,603 | INFO     | preparing for final server update for job 6586322034 in state='finished'
[2025-04-05 21:11:29] 2025-04-05 21:11:00,603 | INFO     | this job has now completed (state=finished)
[2025-04-05 21:11:29] 2025-04-05 21:11:00,604 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-05 21:11:29] 2025-04-05 21:11:00,604 | INFO     | log transfer has been attempted: DONE
[2025-04-05 21:11:29] 2025-04-05 21:11:00,604 | INFO     | job 6586322034 has finished - writing final server update
[2025-04-05 21:11:29] 2025-04-05 21:11:00,604 | INFO     | total number of processed events: 400 (read)
[2025-04-05 21:11:29] 2025-04-05 21:11:00,623 | INFO     | executing command: lscpu
[2025-04-05 21:11:29] 2025-04-05 21:11:00,637 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-05 21:11:29] 2025-04-05 21:11:00,686 | INFO     | monitor loop #361: job 0:6586322034 is in state 'finished'
[2025-04-05 21:11:29] 2025-04-05 21:11:00,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 21:11:29] 2025-04-05 21:11:03,190 | INFO     | monitor loop #362: job 0:6586322034 is in state 'finished'
[2025-04-05 21:11:29] 2025-04-05 21:11:03,190 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 21:11:29] 2025-04-05 21:11:05,700 | INFO     | monitor loop #363: job 0:6586322034 is in state 'finished'
[2025-04-05 21:11:29] 2025-04-05 21:11:05,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 21:11:29] 2025-04-05 21:11:08,203 | INFO     | monitor loop #364: job 0:6586322034 is in state 'finished'
[2025-04-05 21:11:29] 2025-04-05 21:11:08,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 21:11:29] 2025-04-05 21:11:10,705 | INFO     | monitor loop #365: job 0:6586322034 is in state 'finished'
[2025-04-05 21:11:29] 2025-04-05 21:11:10,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 21:11:29] 2025-04-05 21:11:11,405 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-05 21:11:29] 2025-04-05 21:11:11,406 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586322034/memory_monitor_summary.json (trf name=prmon)
[2025-04-05 21:11:29] 2025-04-05 21:11:11,406 | INFO     | extracted standard info from prmon json
[2025-04-05 21:11:29] 2025-04-05 21:11:11,406 | INFO     | extracted standard memory fields from prmon json
[2025-04-05 21:11:29] 2025-04-05 21:11:11,406 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-05 21:11:29] 2025-04-05 21:11:11,407 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-05 21:11:29] 2025-04-05 21:11:11,407 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-05 21:11:29] 2025-04-05 21:11:11,408 | INFO     | fitting pss+swap vs Time
[2025-04-05 21:11:29] 2025-04-05 21:11:11,408 | INFO     | sum of square deviations: 115715658.0
[2025-04-05 21:11:29] 2025-04-05 21:11:11,408 | INFO     | sum of deviations: 12058782865.0
[2025-04-05 21:11:29] 2025-04-05 21:11:11,408 | INFO     | mean x: 1743885134.5
[2025-04-05 21:11:29] 2025-04-05 21:11:11,408 | INFO     | mean y: 2751987.027777778
[2025-04-05 21:11:29] 2025-04-05 21:11:11,408 | INFO     | -- intersect: -181728333865.1291
[2025-04-05 21:11:29] 2025-04-05 21:11:11,408 | INFO     | intersect: -181728333865.1291
[2025-04-05 21:11:29] 2025-04-05 21:11:11,408 | INFO     | chi2: 1.468044201363669
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | -- intersect: -181728333865.1291
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | current memory leak: 104.21 B/s (using 72 data points, chi2=1.47)
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | ..............................
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | . Timing measurements:
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | . get job = 0 s
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | . initial setup = 1 s
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | . payload setup = 5 s
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | . stage-in = 0 s
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | . payload execution = 4799 s
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | . stage-out = 0 s
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | . log creation = 0 s
[2025-04-05 21:11:29] 2025-04-05 21:11:11,409 | INFO     | ..............................
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | 
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | job summary report
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | --------------------------------------------------
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | PanDA job id: 6586322034
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | task id: 43634898
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | errors: (none)
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | pilot state: finished 
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | transexitcode: 0
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | exeerrorcode: 0
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | exeerrordiag: 
[2025-04-05 21:11:29] 2025-04-05 21:11:11,482 | INFO     | exitcode: 0
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | exitmsg: OK
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | cpuconsumptiontime: 43086 s
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | nevents: 400
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | neventsw: 0
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | pid: 3755139
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | pgrp: 3755139
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | corecount: 12
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | event service: False
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | sizes: {0: 2416571, 1: 2417450, 5: 2417656, 11: 2417712, 4807: 2443788, 4808: 2452958, 4819: 2453072}
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | --------------------------------------------------
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | 
[2025-04-05 21:11:29] 2025-04-05 21:11:11,483 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,495 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,495 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,495 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-05 21:11:29] 2025-04-05 21:11:11,495 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,495 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-05 21:11:29] 2025-04-05 21:11:11,495 | INFO     | job 6586322034 has completed (purged errors)
[2025-04-05 21:11:29] 2025-04-05 21:11:11,495 | INFO     | overall cleanup function is called
[2025-04-05 21:11:29] 2025-04-05 21:11:12,502 | INFO     | --- collectZombieJob: --- 10, [3755139]
[2025-04-05 21:11:29] 2025-04-05 21:11:12,502 | INFO     | zombie collector waiting for pid 3755139
[2025-04-05 21:11:29] 2025-04-05 21:11:12,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-05 21:11:29] 2025-04-05 21:11:12,502 | INFO     | collected zombie processes
[2025-04-05 21:11:29] 2025-04-05 21:11:12,502 | INFO     | will attempt to kill all subprocesses of pid=3755139
[2025-04-05 21:11:29] 2025-04-05 21:11:12,579 | INFO     | process IDs to be killed: [3755139] (in reverse order)
[2025-04-05 21:11:29] 2025-04-05 21:11:12,613 | WARNING  | found no corresponding commands to process id(s)
[2025-04-05 21:11:29] 2025-04-05 21:11:12,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-05 21:11:29] 2025-04-05 21:11:12,615 | INFO     | did not find any defunct processes belonging to 3755139
[2025-04-05 21:11:29] 2025-04-05 21:11:12,617 | INFO     | did not find any defunct processes belonging to 3755139
[2025-04-05 21:11:29] 2025-04-05 21:11:12,617 | INFO     | ready for new job
[2025-04-05 21:11:29] 2025-04-05 21:11:12,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-05 21:11:29] 2025-04-05 21:11:12,618 | INFO     | **************************************
[2025-04-05 21:11:29] 2025-04-05 21:11:12,618 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-05 21:11:29] 2025-04-05 21:11:12,618 | INFO     | **************************************
[2025-04-05 21:11:29] 2025-04-05 21:11:12,618 | INFO     | 
[2025-04-05 21:11:29] 2025-04-05 21:11:12,638 | INFO     | architecture information:
[2025-04-05 21:11:29] 2025-04-05 21:11:12,639 | INFO     | executing command: cat /etc/os-release
[2025-04-05 21:11:29] 2025-04-05 21:11:12,645 | INFO     | cat /etc/os-release:
[2025-04-05 21:11:29] NAME="CentOS Linux"
[2025-04-05 21:11:29] VERSION="7 (Core)"
[2025-04-05 21:11:29] ID="centos"
[2025-04-05 21:11:29] ID_LIKE="rhel fedora"
[2025-04-05 21:11:29] VERSION_ID="7"
[2025-04-05 21:11:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-05 21:11:29] ANSI_COLOR="0;31"
[2025-04-05 21:11:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-05 21:11:29] HOME_URL="https://www.centos.org/"
[2025-04-05 21:11:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-05 21:11:29] 
[2025-04-05 21:11:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-05 21:11:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-05 21:11:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-05 21:11:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-05 21:11:29] 
[2025-04-05 21:11:29] 2025-04-05 21:11:12,646 | INFO     | **************************************
[2025-04-05 21:11:29] 2025-04-05 21:11:13,146 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-05 21:11:29] 2025-04-05 21:11:13,154 | INFO     | sufficient remaining disk space (174132822016 B)
[2025-04-05 21:11:29] 2025-04-05 21:11:13,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-05 21:11:29] 2025-04-05 21:11:13,154 | INFO     | current server update state: UPDATING_FINAL
[2025-04-05 21:11:29] 2025-04-05 21:11:13,154 | INFO     | update_server=False
[2025-04-05 21:11:29] 2025-04-05 21:11:13,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-05 21:11:29] 2025-04-05 21:11:13,154 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-05 21:11:29] 2025-04-05 21:11:13,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-05 21:11:29] 2025-04-05 21:11:13,154 | INFO     | found 0 job(s) in 20 queues
[2025-04-05 21:11:29] 2025-04-05 21:11:13,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-05 21:11:29] 2025-04-05 21:11:13,155 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-05 21:11:29] 2025-04-05 21:11:13,206 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-05 21:11:29] 2025-04-05 21:11:13,206 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-05 21:11:29] 2025-04-05 21:11:13,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-05 21:11:29] 2025-04-05 21:11:13,206 | INFO     | will abort loop
[2025-04-05 21:11:29] 2025-04-05 21:11:13,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-05 21:11:29] 2025-04-05 21:11:13,601 | INFO     | all data control threads have been joined
[2025-04-05 21:11:29] 2025-04-05 21:11:13,972 | INFO     | all job control threads have been joined
[2025-04-05 21:11:29] 2025-04-05 21:11:14,158 | INFO     | [job] retrieve thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:14,158 | INFO     | [job] queue monitor thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:14,210 | INFO     | [job] job monitor thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:14,246 | INFO     | [payload] validate_pre thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:14,554 | INFO     | all payload control threads have been joined
[2025-04-05 21:11:29] 2025-04-05 21:11:14,606 | INFO     | [data] control thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:14,630 | INFO     | [job] create_data_payload thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:14,974 | INFO     | [job] control thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:15,178 | INFO     | [job] validate thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:15,422 | INFO     | [payload] validate_post thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:15,538 | INFO     | [payload] execute_payloads thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:15,558 | INFO     | [payload] control thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:15,570 | INFO     | [data] copytool_out thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:15,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-05 21:11:29] 2025-04-05 21:11:15,658 | INFO     | [data] copytool_in thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:15,746 | INFO     | [payload] failed_post thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:19,626 | INFO     | [data] queue_monitor thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:23,518 | INFO     | job.realtimelogging is not enabled
[2025-04-05 21:11:29] 2025-04-05 21:11:24,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-05 21:11:29] 2025-04-05 21:11:24,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140282073642816)>', '<ExcThread(monitor, started 140281399727872)>']
[2025-04-05 21:11:29] 2025-04-05 21:11:25,202 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-05 21:11:29] 2025-04-05 21:11:25,202 | INFO     | [monitor] control thread has ended
[2025-04-05 21:11:29] 2025-04-05 21:11:29,670 | INFO     | all workflow threads have been joined
[2025-04-05 21:11:29] 2025-04-05 21:11:29,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-05 21:11:29] 2025-04-05 21:11:29,670 | INFO     | traces error code: 0
[2025-04-05 21:11:29] 2025-04-05 21:11:29,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-05 21:11:29] 2025-04-05 21:11:29,721 [wrapper] ==== pilot stdout END ====
[2025-04-05 21:11:29] 2025-04-05 21:11:29,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-05 21:11:29] 2025-04-05 21:11:29,732 [wrapper] pilotpid: 3748610
[2025-04-05 21:11:29] 2025-04-05 21:11:29,735 [wrapper] Pilot exit status: 0
[2025-04-05 21:11:29] 2025-04-05 21:11:29,758 [wrapper] pandaids: 6586322034
[2025-04-05 21:11:29] 2025-04-05 21:11:29,778 [wrapper] cleanup supervisor_pilot 3766901 3748611
[2025-04-05 21:11:29] 2025-04-05 21:11:29,780 [wrapper] Test setup, not cleaning
[2025-04-05 21:11:29] 2025-04-05 21:11:29,783 [wrapper] apfmon messages muted
[2025-04-05 21:11:29] 2025-04-05 21:11:29,785 [wrapper] ==== wrapper stdout END ====
[2025-04-05 21:11:29] 2025-04-05 21:11:29,787 [wrapper] ==== wrapper stderr END ====
[2025-04-05 21:11:29]  *** Error codes and diagnostics ***
[2025-04-05 21:11:29]     "exeErrorCode": 0,
[2025-04-05 21:11:29]     "exeErrorDiag": "",
[2025-04-05 21:11:29]     "pilotErrorCode": 0,
[2025-04-05 21:11:29]     "pilotErrorDiag": "",
[2025-04-05 21:11:29]  *** Listing of results directory ***
[2025-04-05 21:11:29] total 672456
[2025-04-05 21:11:29] -rw-r--r-- 1 boinc boinc    495897 Apr  3 19:15 pilot3.tar.gz
[2025-04-05 21:11:29] -rwx------ 1 boinc boinc     37140 Apr  3 19:21 runpilot2-wrapper.sh
[2025-04-05 21:11:29] -rw-r--r-- 1 boinc boinc      5111 Apr  3 19:21 queuedata.json
[2025-04-05 21:11:29] -rw-rw-r-- 1 boinc boinc       100 Apr  5 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-05 21:11:29] -rwxr-xr-x 1 boinc boinc      7986 Apr  5 19:50 run_atlas
[2025-04-05 21:11:29] -rw-rw-r-- 1 boinc boinc       105 Apr  5 19:50 job.xml
[2025-04-05 21:11:29] -rw-r--r-- 2 boinc boinc     17569 Apr  5 19:50 start_atlas.sh
[2025-04-05 21:11:29] drwxrwx--x 2 boinc boinc      4096 Apr  5 19:50 shared
[2025-04-05 21:11:29] -rw-r--r-- 2 boinc boinc    508888 Apr  5 19:50 input.tar.gz
[2025-04-05 21:11:29] -rw-rw-r-- 1 boinc boinc      9677 Apr  5 19:50 init_data.xml
[2025-04-05 21:11:29] -rw-r--r-- 2 boinc boinc 359877651 Apr  5 19:50 EVNT.43634896._000624.pool.root.1
[2025-04-05 21:11:29] -rw-rw-r-- 1 boinc boinc         0 Apr  5 19:50 boinc_lockfile
[2025-04-05 21:11:29] -rw-rw-r-- 1 boinc boinc      2599 Apr  5 19:50 pandaJob.out
[2025-04-05 21:11:29] -rw------- 1 boinc boinc       424 Apr  5 19:50 setup.sh.local
[2025-04-05 21:11:29] -rw------- 1 boinc boinc    980001 Apr  5 19:50 agis_schedconf.cvmfs.json
[2025-04-05 21:11:29] -rw------- 1 boinc boinc   1603525 Apr  5 19:50 agis_ddmendpoints.agis.ALL.json
[2025-04-05 21:11:29] drwx------ 4 boinc boinc      4096 Apr  5 19:50 pilot3
[2025-04-05 21:11:29] -rw------- 1 boinc boinc        95 Apr  5 21:10 pilot_heartbeat.json
[2025-04-05 21:11:29] -rw------- 1 boinc boinc 323223978 Apr  5 21:10 HITS.43634898._016958.pool.root.1
[2025-04-05 21:11:29] -rw------- 1 boinc boinc      1014 Apr  5 21:10 memory_monitor_summary.json
[2025-04-05 21:11:29] -rw-rw-r-- 1 boinc boinc       531 Apr  5 21:10 boinc_task_state.xml
[2025-04-05 21:11:29] -rw------- 1 boinc boinc    352473 Apr  5 21:11 log.43634898._016958.job.log.tgz.1
[2025-04-05 21:11:29] -rw------- 1 boinc boinc      7645 Apr  5 21:11 heartbeat.json
[2025-04-05 21:11:29] -rw-rw-r-- 1 boinc boinc      8192 Apr  5 21:11 boinc_mmap_file
[2025-04-05 21:11:29] -rw-rw-r-- 1 boinc boinc        27 Apr  5 21:11 wrapper_checkpoint.txt
[2025-04-05 21:11:29] -rw------- 1 boinc boinc      4758 Apr  5 21:11 pilotlog.txt
[2025-04-05 21:11:29] -rw------- 1 boinc boinc    479448 Apr  5 21:11 log.43634898._016958.job.log.1
[2025-04-05 21:11:29] -rw------- 1 boinc boinc       357 Apr  5 21:11 output.list
[2025-04-05 21:11:29] -rw-rw-r-- 1 boinc boinc       620 Apr  5 21:11 runtime_log
[2025-04-05 21:11:29] -rw------- 1 boinc boinc    849920 Apr  5 21:11 result.tar.gz
[2025-04-05 21:11:29] -rw-rw-r-- 1 boinc boinc     11399 Apr  5 21:11 runtime_log.err
[2025-04-05 21:11:29] -rw------- 1 boinc boinc       648 Apr  5 21:11 HuhLDmzIfK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmesHLDm3AYhnn.diag
[2025-04-05 21:11:29] -rw-rw-r-- 1 boinc boinc      1857 Apr  5 21:11 stderr.txt
[2025-04-05 21:11:29] HITS file was successfully produced:
[2025-04-05 21:11:29] -rw------- 1 boinc boinc 323223978 Apr  5 21:10 shared/HITS.pool.root.1
[2025-04-05 21:11:29]  *** Contents of shared directory: ***
[2025-04-05 21:11:29] total 668456
[2025-04-05 21:11:29] -rw-r--r-- 2 boinc boinc     17569 Apr  5 19:50 start_atlas.sh
[2025-04-05 21:11:29] -rw-r--r-- 2 boinc boinc    508888 Apr  5 19:50 input.tar.gz
[2025-04-05 21:11:29] -rw-r--r-- 2 boinc boinc 359877651 Apr  5 19:50 ATLAS.root_0
[2025-04-05 21:11:29] -rw------- 1 boinc boinc 323223978 Apr  5 21:10 HITS.pool.root.1
[2025-04-05 21:11:29] -rw------- 1 boinc boinc    849920 Apr  5 21:11 result.tar.gz
21:11:31 (3744898): run_atlas exited; CPU time 43116.516350
21:11:31 (3744898): called boinc_finish(0)

</stderr_txt>
]]>

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