Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:08:01 (35091): wrapper (7.7.26015): starting
00:08:01 (35091): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 00:08:02] Arguments: --nthreads 8
[2025-04-04 00:08:02] Threads: 8
[2025-04-04 00:08:02] Checking for CVMFS
[2025-04-04 00:08:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 00:08:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 00:08:03] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 00:08:03] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/ligo.storage.igwn.org: Permission denied
[2025-04-04 00:08:03] 
[2025-04-04 00:08:03] CVMFS is ok
[2025-04-04 00:08:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 00:08:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 00:08:03] Further information can be found at the LHC@home message board.
[2025-04-04 00:08:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 00:08:03] Checking for apptainer binary...
[2025-04-04 00:08:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 00:08:03] Running /usr/bin/apptainer --version
[2025-04-04 00:08:04] apptainer version 1.3.2-1.el7
[2025-04-04 00:08:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 00:08:28] c-212-17.aglt2.org
[2025-04-04 00:08:28] apptainer works
[2025-04-04 00:08:28] Set ATHENA_PROC_NUMBER=8
[2025-04-04 00:08:28] Set ATHENA_CORE_NUMBER=8
[2025-04-04 00:08:28] Starting ATLAS job with PandaID=6586398360
[2025-04-04 00:08:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 08:12:10]  *** The last 200 lines of the pilot log: ***
[2025-04-04 08:12:10] 2025-04-04 12:11:49,105 | INFO     | intersect: -24812384554.1185
[2025-04-04 08:12:10] 2025-04-04 12:11:49,106 | INFO     | chi2: 8.164785597840636
[2025-04-04 08:12:10] 2025-04-04 12:11:49,106 | INFO     | current chi2=8.164785597840636 (change=16.426250161545326 %)
[2025-04-04 08:12:10] 2025-04-04 12:11:49,106 | INFO     | right removable region: 462
[2025-04-04 08:12:10] 2025-04-04 12:11:49,106 | INFO     | sum of square deviations: 30776594446.600468
[2025-04-04 08:12:10] 2025-04-04 12:11:49,111 | INFO     | sum of deviations: 218298038826.30035
[2025-04-04 08:12:10] 2025-04-04 12:11:49,111 | INFO     | mean x: 1743754488.1079915
[2025-04-04 08:12:10] 2025-04-04 12:11:49,111 | INFO     | mean y: 2510358.0539956805
[2025-04-04 08:12:10] 2025-04-04 12:11:49,111 | INFO     | -- intersect: -12365920645.87018
[2025-04-04 08:12:10] 2025-04-04 12:11:49,111 | INFO     | intersect: -12365920645.87018
[2025-04-04 08:12:10] 2025-04-04 12:11:49,112 | INFO     | chi2: 5.4800968598426305
[2025-04-04 08:12:10] 2025-04-04 12:11:49,112 | INFO     | current chi2=5.4800968598426305 (change=43.90639673672319 %)
[2025-04-04 08:12:10] 2025-04-04 12:11:49,112 | INFO     | sum of square deviations: 29790225819.04146
[2025-04-04 08:12:10] 2025-04-04 12:11:49,116 | INFO     | sum of deviations: 114393339553.82089
[2025-04-04 08:12:10] 2025-04-04 12:11:49,116 | INFO     | mean x: 1743754640.6091702
[2025-04-04 08:12:10] 2025-04-04 12:11:49,116 | INFO     | mean y: 2526415.423580786
[2025-04-04 08:12:10] 2025-04-04 12:11:49,116 | INFO     | -- intersect: -6693425401.573221
[2025-04-04 08:12:10] 2025-04-04 12:11:49,116 | INFO     | intersect: -6693425401.573221
[2025-04-04 08:12:10] 2025-04-04 12:11:49,117 | INFO     | chi2: 3.7293419062794078
[2025-04-04 08:12:10] 2025-04-04 12:11:49,117 | INFO     | current chi2=3.7293419062794078 (change=31.947518416918975 %)
[2025-04-04 08:12:10] 2025-04-04 12:11:49,117 | INFO     | sum of square deviations: 28825159916.481148
[2025-04-04 08:12:10] 2025-04-04 12:11:49,121 | INFO     | sum of deviations: 24381143894.43041
[2025-04-04 08:12:10] 2025-04-04 12:11:49,121 | INFO     | mean x: 1743754793.1103752
[2025-04-04 08:12:10] 2025-04-04 12:11:49,121 | INFO     | mean y: 2540639.2913907287
[2025-04-04 08:12:10] 2025-04-04 12:11:49,121 | INFO     | -- intersect: -1472376989.9814463
[2025-04-04 08:12:10] 2025-04-04 12:11:49,121 | INFO     | intersect: -1472376989.9814463
[2025-04-04 08:12:10] 2025-04-04 12:11:49,122 | INFO     | chi2: 2.432061866601562
[2025-04-04 08:12:10] 2025-04-04 12:11:49,122 | INFO     | current chi2=2.432061866601562 (change=34.785763072393706 %)
[2025-04-04 08:12:10] 2025-04-04 12:11:49,122 | INFO     | sum of square deviations: 27881164176.419586
[2025-04-04 08:12:10] 2025-04-04 12:11:49,126 | INFO     | sum of deviations: -35221283513.3527
[2025-04-04 08:12:10] 2025-04-04 12:11:49,127 | INFO     | mean x: 1743754945.611607
[2025-04-04 08:12:10] 2025-04-04 12:11:49,127 | INFO     | mean y: 2550244.8370535714
[2025-04-04 08:12:10] 2025-04-04 12:11:49,127 | INFO     | -- intersect: 2205373876.1809998
[2025-04-04 08:12:10] 2025-04-04 12:11:49,127 | INFO     | intersect: 2205373876.1809998
[2025-04-04 08:12:10] 2025-04-04 12:11:49,127 | INFO     | chi2: 1.7685032103327298
[2025-04-04 08:12:10] 2025-04-04 12:11:49,127 | INFO     | current chi2=1.7685032103327298 (change=27.283790160982 %)
[2025-04-04 08:12:10] 2025-04-04 12:11:49,128 | INFO     | sum of square deviations: 26958006036.356586
[2025-04-04 08:12:10] 2025-04-04 12:11:49,132 | INFO     | sum of deviations: -54084306513.63658
[2025-04-04 08:12:10] 2025-04-04 12:11:49,134 | INFO     | mean x: 1743755098.1128669
[2025-04-04 08:12:10] 2025-04-04 12:11:49,135 | INFO     | mean y: 2553355.532731377
[2025-04-04 08:12:10] 2025-04-04 12:11:49,135 | INFO     | -- intersect: 3500949530.823403
[2025-04-04 08:12:10] 2025-04-04 12:11:49,135 | INFO     | intersect: 3500949530.823403
[2025-04-04 08:12:10] 2025-04-04 12:11:49,135 | INFO     | chi2: 1.7017071293638533
[2025-04-04 08:12:10] 2025-04-04 12:11:49,135 | INFO     | current chi2=1.7017071293638533 (change=3.7769838685398494 %)
[2025-04-04 08:12:10] 2025-04-04 12:11:49,135 | INFO     | left removable region: 50
[2025-04-04 08:12:10] 2025-04-04 12:11:49,136 | INFO     | sum of square deviations: 21685369226.932045
[2025-04-04 08:12:10] 2025-04-04 12:11:49,139 | INFO     | sum of deviations: 19215835080.174767
[2025-04-04 08:12:10] 2025-04-04 12:11:49,140 | INFO     | mean x: 1743755677.621359
[2025-04-04 08:12:10] 2025-04-04 12:11:49,140 | INFO     | mean y: 2561822.3665048545
[2025-04-04 08:12:10] 2025-04-04 12:11:49,140 | INFO     | -- intersect: -1542614612.9821572
[2025-04-04 08:12:10] 2025-04-04 12:11:49,140 | INFO     | intersect: -1542614612.9821572
[2025-04-04 08:12:10] 2025-04-04 12:11:49,140 | INFO     | chi2: 0.003417200716919408
[2025-04-04 08:12:10] 2025-04-04 12:11:49,140 | INFO     | -- intersect: -1542614612.9821572
[2025-04-04 08:12:10] 2025-04-04 12:11:49,140 | INFO     | current memory leak: 0.89 B/s (using 412 data points, chi2=0.00)
[2025-04-04 08:12:10] 2025-04-04 12:11:49,142 | INFO     | ..............................
[2025-04-04 08:12:10] 2025-04-04 12:11:49,142 | INFO     | . Timing measurements:
[2025-04-04 08:12:10] 2025-04-04 12:11:49,142 | INFO     | . get job = 0 s
[2025-04-04 08:12:10] 2025-04-04 12:11:49,142 | INFO     | . initial setup = 7 s
[2025-04-04 08:12:10] 2025-04-04 12:11:49,142 | INFO     | . payload setup = 76 s
[2025-04-04 08:12:10] 2025-04-04 12:11:49,142 | INFO     | . stage-in = 0 s
[2025-04-04 08:12:10] 2025-04-04 12:11:49,142 | INFO     | . payload execution = 28617 s
[2025-04-04 08:12:10] 2025-04-04 12:11:49,142 | INFO     | . stage-out = 7 s
[2025-04-04 08:12:10] 2025-04-04 12:11:49,142 | INFO     | . log creation = 1 s
[2025-04-04 08:12:10] 2025-04-04 12:11:49,142 | INFO     | ..............................
[2025-04-04 08:12:10] 2025-04-04 12:11:49,228 | INFO     | 28881s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-04 08:12:10] 2025-04-04 12:11:49,655 | INFO     | 
[2025-04-04 08:12:10] 2025-04-04 12:11:49,659 | INFO     | job summary report
[2025-04-04 08:12:10] 2025-04-04 12:11:49,659 | INFO     | --------------------------------------------------
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | PanDA job id: 6586398360
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | task id: 43634898
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | errors: (none)
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | pilot state: finished 
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | transexitcode: 0
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | exeerrorcode: 0
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | exeerrordiag: 
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | exitcode: 0
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | exitmsg: OK
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | cpuconsumptiontime: 68146 s
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | nevents: 400
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | neventsw: 0
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | pid: 30552
[2025-04-04 08:12:10] 2025-04-04 12:11:49,660 | INFO     | pgrp: 30552
[2025-04-04 08:12:10] 2025-04-04 12:11:49,661 | INFO     | corecount: 8
[2025-04-04 08:12:10] 2025-04-04 12:11:49,661 | INFO     | event service: False
[2025-04-04 08:12:10] 2025-04-04 12:11:49,661 | INFO     | sizes: {0: 2417229, 1: 2417428, 2: 2417456, 13: 2417456, 24: 2417512, 35: 2417540, 46: 2417696, 56: 2417958, 28698: 2454472, 28699: 2454471, 28708: 2463468, 28710:
[2025-04-04 08:12:10] 2025-04-04 12:11:49,661 | INFO     | --------------------------------------------------
[2025-04-04 08:12:10] 2025-04-04 12:11:49,661 | INFO     | 
[2025-04-04 08:12:10] 2025-04-04 12:11:49,661 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-04 08:12:10] 2025-04-04 12:11:49,899 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,899 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,900 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,900 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,900 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,900 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,900 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,900 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,900 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,901 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 08:12:10] 2025-04-04 12:11:49,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,901 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 08:12:10] 2025-04-04 12:11:49,901 | INFO     | job 6586398360 has completed (purged errors)
[2025-04-04 08:12:10] 2025-04-04 12:11:49,909 | INFO     | overall cleanup function is called
[2025-04-04 08:12:10] 2025-04-04 12:11:50,949 | INFO     | --- collectZombieJob: --- 10, [30552]
[2025-04-04 08:12:10] 2025-04-04 12:11:50,949 | INFO     | zombie collector waiting for pid 30552
[2025-04-04 08:12:10] 2025-04-04 12:11:50,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 08:12:10] 2025-04-04 12:11:50,950 | INFO     | collected zombie processes
[2025-04-04 08:12:10] 2025-04-04 12:11:50,950 | INFO     | will attempt to kill all subprocesses of pid=30552
[2025-04-04 08:12:10] 2025-04-04 12:11:52,639 | INFO     | process IDs to be killed: [30552] (in reverse order)
[2025-04-04 08:12:10] 2025-04-04 12:11:53,418 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 08:12:10] 2025-04-04 12:11:53,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 08:12:10] 2025-04-04 12:11:53,439 | INFO     | did not find any defunct processes belonging to 30552
[2025-04-04 08:12:10] 2025-04-04 12:11:53,519 | INFO     | did not find any defunct processes belonging to 30552
[2025-04-04 08:12:10] 2025-04-04 12:11:53,527 | INFO     | ready for new job
[2025-04-04 08:12:10] 2025-04-04 12:11:53,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 08:12:10] 2025-04-04 12:11:53,539 | INFO     | **************************************
[2025-04-04 08:12:10] 2025-04-04 12:11:53,539 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 08:12:10] 2025-04-04 12:11:53,539 | INFO     | **************************************
[2025-04-04 08:12:10] 2025-04-04 12:11:53,539 | INFO     | 
[2025-04-04 08:12:10] 2025-04-04 12:11:53,567 | INFO     | architecture information:
[2025-04-04 08:12:10] 2025-04-04 12:11:53,577 | INFO     | executing command: cat /etc/os-release
[2025-04-04 08:12:10] 2025-04-04 12:11:53,775 | INFO     | cat /etc/os-release:
[2025-04-04 08:12:10] NAME="CentOS Linux"
[2025-04-04 08:12:10] VERSION="7 (Core)"
[2025-04-04 08:12:10] ID="centos"
[2025-04-04 08:12:10] ID_LIKE="rhel fedora"
[2025-04-04 08:12:10] VERSION_ID="7"
[2025-04-04 08:12:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 08:12:10] ANSI_COLOR="0;31"
[2025-04-04 08:12:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 08:12:10] HOME_URL="https://www.centos.org/"
[2025-04-04 08:12:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 08:12:10] 
[2025-04-04 08:12:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 08:12:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 08:12:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 08:12:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 08:12:10] 
[2025-04-04 08:12:10] 2025-04-04 12:11:53,775 | INFO     | **************************************
[2025-04-04 08:12:10] 2025-04-04 12:11:54,278 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-04 08:12:10] 2025-04-04 12:11:54,410 | INFO     | sufficient remaining disk space (101516836864 B)
[2025-04-04 08:12:10] 2025-04-04 12:11:54,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 08:12:10] 2025-04-04 12:11:54,411 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 08:12:10] 2025-04-04 12:11:54,411 | INFO     | update_server=False
[2025-04-04 08:12:10] 2025-04-04 12:11:54,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 08:12:10] 2025-04-04 12:11:54,411 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 08:12:10] 2025-04-04 12:11:54,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 08:12:10] 2025-04-04 12:11:54,411 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 08:12:10] 2025-04-04 12:11:54,412 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 08:12:10] 2025-04-04 12:11:54,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 08:12:10] 2025-04-04 12:11:54,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 08:12:10] 2025-04-04 12:11:54,677 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-04 08:12:10] 2025-04-04 12:11:54,677 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-04 08:12:10] 2025-04-04 12:11:54,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 08:12:10] 2025-04-04 12:11:54,678 | INFO     | will abort loop
[2025-04-04 08:12:10] 2025-04-04 12:11:54,920 | INFO     | all data control threads have been joined
[2025-04-04 08:12:10] 2025-04-04 12:11:54,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 08:12:10] 2025-04-04 12:11:55,417 | INFO     | [job] retrieve thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:55,419 | INFO     | [job] queue monitor thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:55,483 | INFO     | [payload] validate_post thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:55,494 | INFO     | [payload] failed_post thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:55,673 | INFO     | all payload control threads have been joined
[2025-04-04 08:12:10] 2025-04-04 12:11:55,683 | INFO     | [job] job monitor thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:55,723 | INFO     | all job control threads have been joined
[2025-04-04 08:12:10] 2025-04-04 12:11:55,926 | INFO     | [data] control thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:56,109 | INFO     | [job] validate thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:56,199 | INFO     | [data] copytool_in thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:56,219 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:56,245 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:56,269 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:56,683 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:56,685 | INFO     | [payload] control thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:56,729 | INFO     | [job] control thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:56,946 | INFO     | [data] copytool_out thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:11:58,419 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 08:12:10] 2025-04-04 12:12:00,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615873259328)>', '<ExcThread(monitor, started 140615568299776)>']
[2025-04-04 08:12:10] 2025-04-04 12:12:00,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 08:12:10] 2025-04-04 12:12:00,457 | INFO     | [monitor] control thread has ended
[2025-04-04 08:12:10] 2025-04-04 12:12:05,483 | INFO     | all workflow threads have been joined
[2025-04-04 08:12:10] 2025-04-04 12:12:05,483 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 08:12:10] 2025-04-04 12:12:05,499 | INFO     | traces error code: 0
[2025-04-04 08:12:10] 2025-04-04 12:12:05,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 08:12:10] 2025-04-04 12:12:07,579 [wrapper] ==== pilot stdout END ====
[2025-04-04 08:12:10] 2025-04-04 12:12:07,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 08:12:10] 2025-04-04 12:12:07,713 [wrapper] pilotpid: 60689
[2025-04-04 08:12:10] 2025-04-04 12:12:07,731 [wrapper] Pilot exit status: 0
[2025-04-04 08:12:10] 2025-04-04 12:12:07,820 [wrapper] pandaids: 6586398360
[2025-04-04 08:12:10] 2025-04-04 12:12:08,867 [wrapper] cleanup supervisor_pilot 65559 60690
[2025-04-04 08:12:10] 2025-04-04 12:12:08,899 [wrapper] Test setup, not cleaning
[2025-04-04 08:12:10] 2025-04-04 12:12:08,957 [wrapper] apfmon messages muted
[2025-04-04 08:12:10] 2025-04-04 12:12:08,974 [wrapper] ==== wrapper stdout END ====
[2025-04-04 08:12:10] 2025-04-04 12:12:09,001 [wrapper] ==== wrapper stderr END ====
[2025-04-04 08:12:10]  *** Error codes and diagnostics ***
[2025-04-04 08:12:10]     "exeErrorCode": 0,
[2025-04-04 08:12:10]     "exeErrorDiag": "",
[2025-04-04 08:12:10]     "pilotErrorCode": 0,
[2025-04-04 08:12:10]     "pilotErrorDiag": "",
[2025-04-04 08:12:10]  *** Listing of results directory ***
[2025-04-04 08:12:10] total 679836
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas    495897 Apr  3 19:12 pilot3.tar.gz
[2025-04-04 08:12:10] -rwx------ 1 boincer umatlas     37140 Apr  3 19:25 runpilot2-wrapper.sh
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas      5111 Apr  3 19:25 queuedata.json
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas       100 Apr  4 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 08:12:10] -rwxr-xr-x 1 boincer umatlas      7986 Apr  4 00:07 run_atlas
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas       105 Apr  4 00:07 job.xml
[2025-04-04 08:12:10] -rw-r--r-- 2 boincer umatlas     17569 Apr  4 00:08 start_atlas.sh
[2025-04-04 08:12:10] drwxrwx--x 2 boincer umatlas      4096 Apr  4 00:08 shared
[2025-04-04 08:12:10] -rw-r--r-- 2 boincer umatlas    508888 Apr  4 00:08 input.tar.gz
[2025-04-04 08:12:10] -rw-r--r-- 2 boincer umatlas 360715504 Apr  4 00:08 EVNT.43634896._000693.pool.root.1
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas         0 Apr  4 00:08 boinc_lockfile
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas      2600 Apr  4 00:08 pandaJob.out
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas       424 Apr  4 00:08 setup.sh.local
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas    979994 Apr  4 00:10 agis_schedconf.cvmfs.json
[2025-04-04 08:12:10] drwx------ 4 boincer umatlas      4096 Apr  4 00:10 pilot3
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas 325837304 Apr  4 08:08 HITS.43634898._018715.pool.root.1
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas       532 Apr  4 08:08 boinc_task_state.xml
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas      6303 Apr  4 08:10 init_data.xml
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas      1094 Apr  4 08:10 memory_monitor_summary.json
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas   1603525 Apr  4 08:10 agis_ddmendpoints.agis.ALL.json
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas    542320 Apr  4 08:10 log.43634898._018715.job.log.tgz.1
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas        95 Apr  4 08:11 pilot_heartbeat.json
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas      7771 Apr  4 08:11 heartbeat.json
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas      4663 Apr  4 08:12 pilotlog.txt
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas   2338723 Apr  4 08:12 log.43634898._018715.job.log.1
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas       357 Apr  4 08:12 output.list
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas       620 Apr  4 08:12 runtime_log
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas   2897920 Apr  4 08:12 result.tar.gz
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas     11014 Apr  4 08:12 runtime_log.err
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas       665 Apr  4 08:12 m64MDm86iK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmfNtKDm9oATHm.diag
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas        28 Apr  4 08:12 wrapper_checkpoint.txt
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas      8192 Apr  4 08:12 boinc_mmap_file
[2025-04-04 08:12:10] -rw-r--r-- 1 boincer umatlas     20723 Apr  4 08:12 stderr.txt
[2025-04-04 08:12:10] HITS file was successfully produced:
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas 325837304 Apr  4 08:08 shared/HITS.pool.root.1
[2025-04-04 08:12:10]  *** Contents of shared directory: ***
[2025-04-04 08:12:10] total 673824
[2025-04-04 08:12:10] -rw-r--r-- 2 boincer umatlas     17569 Apr  4 00:08 start_atlas.sh
[2025-04-04 08:12:10] -rw-r--r-- 2 boincer umatlas    508888 Apr  4 00:08 input.tar.gz
[2025-04-04 08:12:10] -rw-r--r-- 2 boincer umatlas 360715504 Apr  4 00:08 ATLAS.root_0
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas 325837304 Apr  4 08:08 HITS.pool.root.1
[2025-04-04 08:12:10] -rw------- 1 boincer umatlas   2897920 Apr  4 08:12 result.tar.gz
08:12:12 (35091): run_atlas exited; CPU time 67517.228893
08:12:12 (35091): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN