Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:44:50 (319151): wrapper (7.7.26015): starting
23:44:50 (319151): wrapper: running run_atlas (--nthreads 8)
[2025-04-03 23:44:50] Arguments: --nthreads 8
[2025-04-03 23:44:50] Threads: 8
[2025-04-03 23:44:50] Checking for CVMFS
[2025-04-03 23:44:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 23:44:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 23:44:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 23:44:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 23:44:54] 2.11.2.0 135154 20107 178728 144475 3 242 11271540 18432000 25044 130560 0 109007845 99.104 201130800 41908 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-03 23:44:54] CVMFS is ok
[2025-04-03 23:44:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 23:44:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 23:44:54] Further information can be found at the LHC@home message board.
[2025-04-03 23:44:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 23:44:54] Checking for apptainer binary...
[2025-04-03 23:44:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 23:44:54] Running /usr/bin/apptainer --version
[2025-04-03 23:44:54] apptainer version 1.3.2-1.el7
[2025-04-03 23:44:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 23:45:22] c-211-35-3.aglt2.org
[2025-04-03 23:45:22] apptainer works
[2025-04-03 23:45:22] Set ATHENA_PROC_NUMBER=8
[2025-04-03 23:45:22] Set ATHENA_CORE_NUMBER=8
[2025-04-03 23:45:22] Starting ATLAS job with PandaID=6586398283
[2025-04-03 23:45:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 10:46:10]  *** The last 200 lines of the pilot log: ***
[2025-04-04 10:46:10] 2025-04-04 14:45:43,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 10:46:10] 2025-04-04 14:45:43,543 | INFO     | PID=25724 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-04 10:46:10] 2025-04-04 14:45:43,544 | INFO     | .. there are 25 such processes running
[2025-04-04 10:46:10] 2025-04-04 14:45:45,934 | INFO     | monitor loop #2250: job 0:6586398283 is in state 'finished'
[2025-04-04 10:46:10] 2025-04-04 14:45:45,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 10:46:10] 2025-04-04 14:45:48,439 | INFO     | monitor loop #2251: job 0:6586398283 is in state 'finished'
[2025-04-04 10:46:10] 2025-04-04 14:45:48,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 10:46:10] 2025-04-04 14:45:49,385 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-04 10:46:10] 2025-04-04 14:45:49,386 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6586398283/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 10:46:10] 2025-04-04 14:45:49,387 | INFO     | extracted standard info from prmon json
[2025-04-04 10:46:10] 2025-04-04 14:45:49,387 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 10:46:10] 2025-04-04 14:45:49,387 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 10:46:10] 2025-04-04 14:45:49,388 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 10:46:10] 2025-04-04 14:45:49,388 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 10:46:10] 2025-04-04 14:45:49,419 | INFO     | fitting pss+swap vs Time
[2025-04-04 10:46:10] 2025-04-04 14:45:49,420 | INFO     | sum of square deviations: 81670773750.49603
[2025-04-04 10:46:10] 2025-04-04 14:45:49,451 | INFO     | sum of deviations: 649322790627.7921
[2025-04-04 10:46:10] 2025-04-04 14:45:49,452 | INFO     | mean x: 1743758304.6099844
[2025-04-04 10:46:10] 2025-04-04 14:45:49,452 | INFO     | mean y: 2490041.2511700466
[2025-04-04 10:46:10] 2025-04-04 14:45:49,452 | INFO     | -- intersect: -13861245497.594093
[2025-04-04 10:46:10] 2025-04-04 14:45:49,452 | INFO     | intersect: -13861245497.594093
[2025-04-04 10:46:10] 2025-04-04 14:45:49,457 | INFO     | chi2: 10.890566848914837
[2025-04-04 10:46:10] 2025-04-04 14:45:49,458 | INFO     | sum of square deviations: 79774574963.07304
[2025-04-04 10:46:10] 2025-04-04 14:45:49,480 | INFO     | sum of deviations: 775260715967.6074
[2025-04-04 10:46:10] 2025-04-04 14:45:49,481 | INFO     | mean x: 1743758152.1116352
[2025-04-04 10:46:10] 2025-04-04 14:45:49,481 | INFO     | mean y: 2500136.5125786164
[2025-04-04 10:46:10] 2025-04-04 14:45:49,481 | INFO     | -- intersect: -16943590696.389833
[2025-04-04 10:46:10] 2025-04-04 14:45:49,481 | INFO     | intersect: -16943590696.389833
[2025-04-04 10:46:10] 2025-04-04 14:45:49,482 | INFO     | chi2: 8.576281747297669
[2025-04-04 10:46:10] 2025-04-04 14:45:49,482 | INFO     | current chi2=8.576281747297669 (change=21.25036404186591 %)
[2025-04-04 10:46:10] 2025-04-04 14:45:49,482 | INFO     | right removable region: 635
[2025-04-04 10:46:10] 2025-04-04 14:45:49,490 | INFO     | sum of square deviations: 79774414288.62114
[2025-04-04 10:46:10] 2025-04-04 14:45:49,505 | INFO     | sum of deviations: 432363442315.6664
[2025-04-04 10:46:10] 2025-04-04 14:45:49,506 | INFO     | mean x: 1743758457.11478
[2025-04-04 10:46:10] 2025-04-04 14:45:49,506 | INFO     | mean y: 2507481.3333333335
[2025-04-04 10:46:10] 2025-04-04 14:45:49,506 | INFO     | -- intersect: -9448359890.221178
[2025-04-04 10:46:10] 2025-04-04 14:45:49,506 | INFO     | intersect: -9448359890.221178
[2025-04-04 10:46:10] 2025-04-04 14:45:49,511 | INFO     | chi2: 6.688220672274473
[2025-04-04 10:46:10] 2025-04-04 14:45:49,512 | INFO     | current chi2=6.688220672274473 (change=38.587028893349995 %)
[2025-04-04 10:46:10] 2025-04-04 14:45:49,513 | INFO     | sum of square deviations: 77907636776.71645
[2025-04-04 10:46:10] 2025-04-04 14:45:49,526 | INFO     | sum of deviations: 292610974805.77344
[2025-04-04 10:46:10] 2025-04-04 14:45:49,526 | INFO     | mean x: 1743758609.6196513
[2025-04-04 10:46:10] 2025-04-04 14:45:49,526 | INFO     | mean y: 2518894.969889065
[2025-04-04 10:46:10] 2025-04-04 14:45:49,526 | INFO     | -- intersect: -6546812180.867057
[2025-04-04 10:46:10] 2025-04-04 14:45:49,526 | INFO     | intersect: -6546812180.867057
[2025-04-04 10:46:10] 2025-04-04 14:45:49,527 | INFO     | chi2: 5.047239707147308
[2025-04-04 10:46:10] 2025-04-04 14:45:49,528 | INFO     | current chi2=5.047239707147308 (change=24.535389089802774 %)
[2025-04-04 10:46:10] 2025-04-04 14:45:49,528 | INFO     | left removable region: 20
[2025-04-04 10:46:10] 2025-04-04 14:45:49,528 | INFO     | sum of square deviations: 72130203673.21289
[2025-04-04 10:46:10] 2025-04-04 14:45:49,540 | INFO     | sum of deviations: 193948531230.13327
[2025-04-04 10:46:10] 2025-04-04 14:45:49,541 | INFO     | mean x: 1743758731.6308944
[2025-04-04 10:46:10] 2025-04-04 14:45:49,541 | INFO     | mean y: 2548432.066666667
[2025-04-04 10:46:10] 2025-04-04 14:45:49,541 | INFO     | -- intersect: -4686187043.459653
[2025-04-04 10:46:10] 2025-04-04 14:45:49,542 | INFO     | intersect: -4686187043.459653
[2025-04-04 10:46:10] 2025-04-04 14:45:49,543 | INFO     | chi2: 0.44820646801134195
[2025-04-04 10:46:10] 2025-04-04 14:45:49,543 | INFO     | -- intersect: -4686187043.459653
[2025-04-04 10:46:10] 2025-04-04 14:45:49,543 | INFO     | current memory leak: 2.69 B/s (using 615 data points, chi2=0.45)
[2025-04-04 10:46:10] 2025-04-04 14:45:49,545 | INFO     | ..............................
[2025-04-04 10:46:10] 2025-04-04 14:45:49,545 | INFO     | . Timing measurements:
[2025-04-04 10:46:10] 2025-04-04 14:45:49,545 | INFO     | . get job = 0 s
[2025-04-04 10:46:10] 2025-04-04 14:45:49,545 | INFO     | . initial setup = 14 s
[2025-04-04 10:46:10] 2025-04-04 14:45:49,546 | INFO     | . payload setup = 101 s
[2025-04-04 10:46:10] 2025-04-04 14:45:49,546 | INFO     | . stage-in = 0 s
[2025-04-04 10:46:10] 2025-04-04 14:45:49,546 | INFO     | . payload execution = 39198 s
[2025-04-04 10:46:10] 2025-04-04 14:45:49,546 | INFO     | . stage-out = 6 s
[2025-04-04 10:46:10] 2025-04-04 14:45:49,546 | INFO     | . log creation = 0 s
[2025-04-04 10:46:10] 2025-04-04 14:45:49,546 | INFO     | ..............................
[2025-04-04 10:46:10] 2025-04-04 14:45:49,765 | INFO     | 
[2025-04-04 10:46:10] 2025-04-04 14:45:49,766 | INFO     | job summary report
[2025-04-04 10:46:10] 2025-04-04 14:45:49,766 | INFO     | --------------------------------------------------
[2025-04-04 10:46:10] 2025-04-04 14:45:49,766 | INFO     | PanDA job id: 6586398283
[2025-04-04 10:46:10] 2025-04-04 14:45:49,766 | INFO     | task id: 43634898
[2025-04-04 10:46:10] 2025-04-04 14:45:49,766 | INFO     | errors: (none)
[2025-04-04 10:46:10] 2025-04-04 14:45:49,766 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 10:46:10] 2025-04-04 14:45:49,766 | INFO     | pilot state: finished 
[2025-04-04 10:46:10] 2025-04-04 14:45:49,766 | INFO     | transexitcode: 0
[2025-04-04 10:46:10] 2025-04-04 14:45:49,766 | INFO     | exeerrorcode: 0
[2025-04-04 10:46:10] 2025-04-04 14:45:49,766 | INFO     | exeerrordiag: 
[2025-04-04 10:46:10] 2025-04-04 14:45:49,766 | INFO     | exitcode: 0
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | exitmsg: OK
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | cpuconsumptiontime: 93908 s
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | nevents: 400
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | neventsw: 0
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | pid: 78646
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | pgrp: 78646
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | corecount: 8
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | event service: False
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | sizes: {0: 2416571, 1: 2417256, 2: 2417455, 14: 2417455, 24: 2417483, 36: 2417511, 47: 2417667, 58: 2417957, 39304: 2458909, 39305: 2458908, 39312: 2467905, 39315:
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | --------------------------------------------------
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | 
[2025-04-04 10:46:10] 2025-04-04 14:45:49,767 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-04-04 10:46:10] 2025-04-04 14:45:50,061 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,062 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,062 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,062 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,072 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,072 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,072 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,073 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 10:46:10] 2025-04-04 14:45:50,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,073 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 10:46:10] 2025-04-04 14:45:50,076 | INFO     | job 6586398283 has completed (purged errors)
[2025-04-04 10:46:10] 2025-04-04 14:45:50,077 | INFO     | overall cleanup function is called
[2025-04-04 10:46:10] 2025-04-04 14:45:51,099 | INFO     | --- collectZombieJob: --- 10, [78646]
[2025-04-04 10:46:10] 2025-04-04 14:45:51,100 | INFO     | zombie collector waiting for pid 78646
[2025-04-04 10:46:10] 2025-04-04 14:45:51,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 10:46:10] 2025-04-04 14:45:51,100 | INFO     | collected zombie processes
[2025-04-04 10:46:10] 2025-04-04 14:45:51,100 | INFO     | will attempt to kill all subprocesses of pid=78646
[2025-04-04 10:46:10] 2025-04-04 14:45:51,997 | INFO     | process IDs to be killed: [78646] (in reverse order)
[2025-04-04 10:46:10] 2025-04-04 14:45:53,397 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 10:46:10] 2025-04-04 14:45:53,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 10:46:10] 2025-04-04 14:45:53,451 | INFO     | did not find any defunct processes belonging to 78646
[2025-04-04 10:46:10] 2025-04-04 14:45:53,474 | INFO     | did not find any defunct processes belonging to 78646
[2025-04-04 10:46:10] 2025-04-04 14:45:53,474 | INFO     | ready for new job
[2025-04-04 10:46:10] 2025-04-04 14:45:53,474 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 10:46:10] 2025-04-04 14:45:53,477 | INFO     | **************************************
[2025-04-04 10:46:10] 2025-04-04 14:45:53,478 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 10:46:10] 2025-04-04 14:45:53,478 | INFO     | **************************************
[2025-04-04 10:46:10] 2025-04-04 14:45:53,478 | INFO     | 
[2025-04-04 10:46:10] 2025-04-04 14:45:53,483 | INFO     | architecture information:
[2025-04-04 10:46:10] 2025-04-04 14:45:53,496 | INFO     | executing command: cat /etc/os-release
[2025-04-04 10:46:10] 2025-04-04 14:45:53,648 | INFO     | cat /etc/os-release:
[2025-04-04 10:46:10] NAME="CentOS Linux"
[2025-04-04 10:46:10] VERSION="7 (Core)"
[2025-04-04 10:46:10] ID="centos"
[2025-04-04 10:46:10] ID_LIKE="rhel fedora"
[2025-04-04 10:46:10] VERSION_ID="7"
[2025-04-04 10:46:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 10:46:10] ANSI_COLOR="0;31"
[2025-04-04 10:46:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 10:46:10] HOME_URL="https://www.centos.org/"
[2025-04-04 10:46:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 10:46:10] 
[2025-04-04 10:46:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 10:46:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 10:46:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 10:46:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 10:46:10] 
[2025-04-04 10:46:10] 2025-04-04 14:45:53,649 | INFO     | **************************************
[2025-04-04 10:46:10] 2025-04-04 14:45:54,152 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-04-04 10:46:10] 2025-04-04 14:45:54,281 | INFO     | sufficient remaining disk space (101856575488 B)
[2025-04-04 10:46:10] 2025-04-04 14:45:54,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 10:46:10] 2025-04-04 14:45:54,282 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 10:46:10] 2025-04-04 14:45:54,282 | INFO     | update_server=False
[2025-04-04 10:46:10] 2025-04-04 14:45:54,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 10:46:10] 2025-04-04 14:45:54,282 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 10:46:10] 2025-04-04 14:45:54,283 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 10:46:10] 2025-04-04 14:45:54,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 10:46:10] 2025-04-04 14:45:54,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 10:46:10] 2025-04-04 14:45:54,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 10:46:10] 2025-04-04 14:45:54,474 | INFO     | aborting loop
[2025-04-04 10:46:10] 2025-04-04 14:45:54,682 | INFO     | all job control threads have been joined
[2025-04-04 10:46:10] 2025-04-04 14:45:54,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 10:46:10] 2025-04-04 14:45:55,193 | INFO     | all payload control threads have been joined
[2025-04-04 10:46:10] 2025-04-04 14:45:55,288 | INFO     | [job] retrieve thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:55,300 | INFO     | all data control threads have been joined
[2025-04-04 10:46:10] 2025-04-04 14:45:55,479 | INFO     | [job] job monitor thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:55,551 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 10:46:10] 2025-04-04 14:45:55,589 | INFO     | [payload] validate_post thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:55,689 | INFO     | [job] control thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:55,720 | INFO     | [job] validate thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:55,789 | INFO     | [job] queue monitor thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:56,186 | INFO     | [data] copytool_in thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:56,199 | INFO     | [payload] control thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:56,292 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:56,308 | INFO     | [data] control thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:56,575 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:56,610 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:56,639 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:56,679 | INFO     | [payload] failed_post thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:45:57,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 10:46:10] 2025-04-04 14:45:57,572 | INFO     | [data] copytool_out thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:46:01,123 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 10:46:10] 2025-04-04 14:46:02,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139666057516864)>', '<ExcThread(monitor, started 139665482966784)>']
[2025-04-04 10:46:10] 2025-04-04 14:46:03,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 10:46:10] 2025-04-04 14:46:03,339 | INFO     | [monitor] control thread has ended
[2025-04-04 10:46:10] 2025-04-04 14:46:07,442 | INFO     | all workflow threads have been joined
[2025-04-04 10:46:10] 2025-04-04 14:46:07,442 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 10:46:10] 2025-04-04 14:46:07,443 | INFO     | traces error code: 0
[2025-04-04 10:46:10] 2025-04-04 14:46:07,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 10:46:10] 2025-04-04 14:46:08,299 [wrapper] ==== pilot stdout END ====
[2025-04-04 10:46:10] 2025-04-04 14:46:08,346 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 10:46:10] 2025-04-04 14:46:08,397 [wrapper] pilotpid: 25724
[2025-04-04 10:46:10] 2025-04-04 14:46:08,430 [wrapper] Pilot exit status: 0
[2025-04-04 10:46:10] 2025-04-04 14:46:08,532 [wrapper] pandaids: 6586398283
[2025-04-04 10:46:10] 2025-04-04 14:46:08,892 [wrapper] cleanup supervisor_pilot  91556 25725
[2025-04-04 10:46:10] 2025-04-04 14:46:08,924 [wrapper] Test setup, not cleaning
[2025-04-04 10:46:10] 2025-04-04 14:46:08,950 [wrapper] apfmon messages muted
[2025-04-04 10:46:10] 2025-04-04 14:46:08,978 [wrapper] ==== wrapper stdout END ====
[2025-04-04 10:46:10] 2025-04-04 14:46:09,001 [wrapper] ==== wrapper stderr END ====
[2025-04-04 10:46:10]  *** Error codes and diagnostics ***
[2025-04-04 10:46:10]     "exeErrorCode": 0,
[2025-04-04 10:46:10]     "exeErrorDiag": "",
[2025-04-04 10:46:10]     "pilotErrorCode": 0,
[2025-04-04 10:46:10]     "pilotErrorDiag": "",
[2025-04-04 10:46:10]  *** Listing of results directory ***
[2025-04-04 10:46:10] total 676736
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas    495897 Apr  3 19:12 pilot3.tar.gz
[2025-04-04 10:46:10] -rwx------ 1 boincer umatlas     37140 Apr  3 19:15 runpilot2-wrapper.sh
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas      5111 Apr  3 19:15 queuedata.json
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas       100 Apr  3 23:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 10:46:10] -rwxr-xr-x 1 boincer umatlas      7986 Apr  3 23:44 run_atlas
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas       105 Apr  3 23:44 job.xml
[2025-04-04 10:46:10] -rw-r--r-- 2 boincer umatlas 358652618 Apr  3 23:44 EVNT.43634896._000690.pool.root.1
[2025-04-04 10:46:10] -rw-r--r-- 2 boincer umatlas     17569 Apr  3 23:44 start_atlas.sh
[2025-04-04 10:46:10] drwxrwx--x 2 boincer umatlas      4096 Apr  3 23:44 shared
[2025-04-04 10:46:10] -rw-r--r-- 2 boincer umatlas    508889 Apr  3 23:44 input.tar.gz
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas         0 Apr  3 23:44 boinc_lockfile
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas      2599 Apr  3 23:45 pandaJob.out
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas       424 Apr  3 23:45 setup.sh.local
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas    979994 Apr  3 23:47 agis_schedconf.cvmfs.json
[2025-04-04 10:46:10] drwx------ 4 boincer umatlas      4096 Apr  3 23:47 pilot3
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas      6299 Apr  4 10:39 init_data.xml
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas 323206055 Apr  4 10:40 HITS.43634898._018638.pool.root.1
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas       532 Apr  4 10:41 boinc_task_state.xml
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas      1060 Apr  4 10:44 memory_monitor_summary.json
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas   1603525 Apr  4 10:44 agis_ddmendpoints.agis.ALL.json
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas    617506 Apr  4 10:44 log.43634898._018638.job.log.tgz.1
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas        95 Apr  4 10:45 pilot_heartbeat.json
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas      7763 Apr  4 10:45 heartbeat.json
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas      8192 Apr  4 10:45 boinc_mmap_file
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas        28 Apr  4 10:45 wrapper_checkpoint.txt
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas      4477 Apr  4 10:46 pilotlog.txt
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas   3022939 Apr  4 10:46 log.43634898._018638.job.log.1
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas       357 Apr  4 10:46 output.list
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas       620 Apr  4 10:46 runtime_log
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas   3655680 Apr  4 10:46 result.tar.gz
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas       667 Apr  4 10:46 mGaLDm2xiK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmnCILDmyFAuTo.diag
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas     11024 Apr  4 10:46 runtime_log.err
[2025-04-04 10:46:10] -rw-r--r-- 1 boincer umatlas     21287 Apr  4 10:46 stderr.txt
[2025-04-04 10:46:10] HITS file was successfully produced:
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas 323206055 Apr  4 10:40 shared/HITS.pool.root.1
[2025-04-04 10:46:10]  *** Contents of shared directory: ***
[2025-04-04 10:46:10] total 669980
[2025-04-04 10:46:10] -rw-r--r-- 2 boincer umatlas 358652618 Apr  3 23:44 ATLAS.root_0
[2025-04-04 10:46:10] -rw-r--r-- 2 boincer umatlas     17569 Apr  3 23:44 start_atlas.sh
[2025-04-04 10:46:10] -rw-r--r-- 2 boincer umatlas    508889 Apr  3 23:44 input.tar.gz
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas 323206055 Apr  4 10:40 HITS.pool.root.1
[2025-04-04 10:46:10] -rw------- 1 boincer umatlas   3655680 Apr  4 10:46 result.tar.gz
10:46:12 (319151): run_atlas exited; CPU time 95582.707480
10:46:12 (319151): called boinc_finish(0)

</stderr_txt>
]]>

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