Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:18:24 (1766035): wrapper (7.7.26015): starting
23:18:24 (1766035): wrapper: running run_atlas (--nthreads 8)
[2025-04-03 23:18:24] Arguments: --nthreads 8
[2025-04-03 23:18:24] Threads: 8
[2025-04-03 23:18:24] Checking for CVMFS
[2025-04-03 23:18:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 23:18:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 23:18:25] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 23:18:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 23:18:26] 2.12.6.0 2303914 11471 328376 144474 3 194 19286015 32935936 24527 130560 0 15582488 99.680 13120048 23093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-03 23:18:26] CVMFS is ok
[2025-04-03 23:18:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 23:18:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 23:18:26] Further information can be found at the LHC@home message board.
[2025-04-03 23:18:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 23:18:26] Checking for apptainer binary...
[2025-04-03 23:18:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 23:18:26] Running /usr/bin/apptainer --version
[2025-04-03 23:18:26] apptainer version 1.4.0-1.el9
[2025-04-03 23:18:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 23:18:26] c6-2-11-1.aglt2.org
[2025-04-03 23:18:26] apptainer works
[2025-04-03 23:18:27] Set ATHENA_PROC_NUMBER=8
[2025-04-03 23:18:27] Set ATHENA_CORE_NUMBER=8
[2025-04-03 23:18:27] Starting ATLAS job with PandaID=6586396629
[2025-04-03 23:18:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 03:06:39]  *** The last 200 lines of the pilot log: ***
[2025-04-04 03:06:39] 2025-04-04 07:06:22,532 | INFO     | sum of square deviations: 3124809440.4999976
[2025-04-04 03:06:39] 2025-04-04 07:06:22,533 | INFO     | sum of deviations: 84630980457.08333
[2025-04-04 03:06:39] 2025-04-04 07:06:22,533 | INFO     | mean x: 1743743752.5833333
[2025-04-04 03:06:39] 2025-04-04 07:06:22,533 | INFO     | mean y: 2188307.467592593
[2025-04-04 03:06:39] 2025-04-04 07:06:22,533 | INFO     | -- intersect: -47224609440.37458
[2025-04-04 03:06:39] 2025-04-04 07:06:22,533 | INFO     | intersect: -47224609440.37458
[2025-04-04 03:06:39] 2025-04-04 07:06:22,533 | INFO     | chi2: 2.1389573487750324
[2025-04-04 03:06:39] 2025-04-04 07:06:22,534 | INFO     | current chi2=2.1389573487750324 (change=58.850810134026496 %)
[2025-04-04 03:06:39] 2025-04-04 07:06:22,534 | INFO     | sum of square deviations: 2912781370.464459
[2025-04-04 03:06:39] 2025-04-04 07:06:22,535 | INFO     | sum of deviations: 52145665140.96679
[2025-04-04 03:06:39] 2025-04-04 07:06:22,535 | INFO     | mean x: 1743743905.085308
[2025-04-04 03:06:39] 2025-04-04 07:06:22,535 | INFO     | mean y: 2211654.2796208533
[2025-04-04 03:06:39] 2025-04-04 07:06:22,535 | INFO     | -- intersect: -31214922143.744217
[2025-04-04 03:06:39] 2025-04-04 07:06:22,535 | INFO     | intersect: -31214922143.744217
[2025-04-04 03:06:39] 2025-04-04 07:06:22,536 | INFO     | chi2: 1.1777633613373735
[2025-04-04 03:06:39] 2025-04-04 07:06:22,536 | INFO     | current chi2=1.1777633613373735 (change=44.9375013479408 %)
[2025-04-04 03:06:39] 2025-04-04 07:06:22,536 | INFO     | sum of square deviations: 2710567437.9271913
[2025-04-04 03:06:39] 2025-04-04 07:06:22,537 | INFO     | sum of deviations: 24609000663.747566
[2025-04-04 03:06:39] 2025-04-04 07:06:22,537 | INFO     | mean x: 1743744057.5873787
[2025-04-04 03:06:39] 2025-04-04 07:06:22,537 | INFO     | mean y: 2232404.9029126214
[2025-04-04 03:06:39] 2025-04-04 07:06:22,537 | INFO     | -- intersect: -15829064787.757576
[2025-04-04 03:06:39] 2025-04-04 07:06:22,538 | INFO     | intersect: -15829064787.757576
[2025-04-04 03:06:39] 2025-04-04 07:06:22,538 | INFO     | chi2: 0.45437555224775816
[2025-04-04 03:06:39] 2025-04-04 07:06:22,538 | INFO     | current chi2=0.45437555224775816 (change=61.4204714492217 %)
[2025-04-04 03:06:39] 2025-04-04 07:06:22,538 | INFO     | sum of square deviations: 2517947889.56219
[2025-04-04 03:06:39] 2025-04-04 07:06:22,539 | INFO     | sum of deviations: 6546683227.223883
[2025-04-04 03:06:39] 2025-04-04 07:06:22,539 | INFO     | mean x: 1743744210.084577
[2025-04-04 03:06:39] 2025-04-04 07:06:22,539 | INFO     | mean y: 2246658.104477612
[2025-04-04 03:06:39] 2025-04-04 07:06:22,539 | INFO     | -- intersect: -4531501248.296548
[2025-04-04 03:06:39] 2025-04-04 07:06:22,540 | INFO     | intersect: -4531501248.296548
[2025-04-04 03:06:39] 2025-04-04 07:06:22,540 | INFO     | chi2: 0.11270346283507074
[2025-04-04 03:06:39] 2025-04-04 07:06:22,540 | INFO     | current chi2=0.11270346283507074 (change=75.19596679937202 %)
[2025-04-04 03:06:39] 2025-04-04 07:06:22,540 | INFO     | sum of square deviations: 2334689247.852047
[2025-04-04 03:06:39] 2025-04-04 07:06:22,541 | INFO     | sum of deviations: 2004801504.5510204
[2025-04-04 03:06:39] 2025-04-04 07:06:22,541 | INFO     | mean x: 1743744362.5765307
[2025-04-04 03:06:39] 2025-04-04 07:06:22,541 | INFO     | mean y: 2250399.163265306
[2025-04-04 03:06:39] 2025-04-04 07:06:22,541 | INFO     | -- intersect: -1495105758.5618107
[2025-04-04 03:06:39] 2025-04-04 07:06:22,542 | INFO     | intersect: -1495105758.5618107
[2025-04-04 03:06:39] 2025-04-04 07:06:22,542 | INFO     | chi2: 0.0748096307186206
[2025-04-04 03:06:39] 2025-04-04 07:06:22,542 | INFO     | current chi2=0.0748096307186206 (change=33.62259788938663 %)
[2025-04-04 03:06:39] 2025-04-04 07:06:22,542 | INFO     | sum of square deviations: 2160523267.821996
[2025-04-04 03:06:39] 2025-04-04 07:06:22,543 | INFO     | sum of deviations: 3226866156.7539268
[2025-04-04 03:06:39] 2025-04-04 07:06:22,543 | INFO     | mean x: 1743744515.0785341
[2025-04-04 03:06:39] 2025-04-04 07:06:22,543 | INFO     | mean y: 2249326.54973822
[2025-04-04 03:06:39] 2025-04-04 07:06:22,543 | INFO     | -- intersect: -2602133715.9918795
[2025-04-04 03:06:39] 2025-04-04 07:06:22,543 | INFO     | intersect: -2602133715.9918795
[2025-04-04 03:06:39] 2025-04-04 07:06:22,544 | INFO     | chi2: 0.07192928279205098
[2025-04-04 03:06:39] 2025-04-04 07:06:22,544 | INFO     | current chi2=0.07192928279205098 (change=3.8502367929115855 %)
[2025-04-04 03:06:39] 2025-04-04 07:06:22,544 | INFO     | left removable region: 60
[2025-04-04 03:06:39] 2025-04-04 07:06:22,544 | INFO     | sum of square deviations: 1154646562.2193487
[2025-04-04 03:06:39] 2025-04-04 07:06:22,545 | INFO     | sum of deviations: 3389548394.270968
[2025-04-04 03:06:39] 2025-04-04 07:06:22,545 | INFO     | mean x: 1743745247.0709677
[2025-04-04 03:06:39] 2025-04-04 07:06:22,545 | INFO     | mean y: 2249878.793548387
[2025-04-04 03:06:39] 2025-04-04 07:06:22,545 | INFO     | -- intersect: -5116640260.944475
[2025-04-04 03:06:39] 2025-04-04 07:06:22,545 | INFO     | intersect: -5116640260.944475
[2025-04-04 03:06:39] 2025-04-04 07:06:22,545 | INFO     | chi2: 0.027894360563963598
[2025-04-04 03:06:39] 2025-04-04 07:06:22,545 | INFO     | -- intersect: -5116640260.944475
[2025-04-04 03:06:39] 2025-04-04 07:06:22,546 | INFO     | current memory leak: 2.94 B/s (using 155 data points, chi2=0.03)
[2025-04-04 03:06:39] 2025-04-04 07:06:22,546 | INFO     | ..............................
[2025-04-04 03:06:39] 2025-04-04 07:06:22,546 | INFO     | . Timing measurements:
[2025-04-04 03:06:39] 2025-04-04 07:06:22,546 | INFO     | . get job = 0 s
[2025-04-04 03:06:39] 2025-04-04 07:06:22,546 | INFO     | . initial setup = 6 s
[2025-04-04 03:06:39] 2025-04-04 07:06:22,546 | INFO     | . payload setup = 36 s
[2025-04-04 03:06:39] 2025-04-04 07:06:22,547 | INFO     | . stage-in = 0 s
[2025-04-04 03:06:39] 2025-04-04 07:06:22,547 | INFO     | . payload execution = 13501 s
[2025-04-04 03:06:39] 2025-04-04 07:06:22,547 | INFO     | . stage-out = 3 s
[2025-04-04 03:06:39] 2025-04-04 07:06:22,547 | INFO     | . log creation = 0 s
[2025-04-04 03:06:39] 2025-04-04 07:06:22,547 | INFO     | ..............................
[2025-04-04 03:06:39] 2025-04-04 07:06:22,668 | INFO     | 
[2025-04-04 03:06:39] 2025-04-04 07:06:22,668 | INFO     | job summary report
[2025-04-04 03:06:39] 2025-04-04 07:06:22,668 | INFO     | --------------------------------------------------
[2025-04-04 03:06:39] 2025-04-04 07:06:22,668 | INFO     | PanDA job id: 6586396629
[2025-04-04 03:06:39] 2025-04-04 07:06:22,668 | INFO     | task id: 43634898
[2025-04-04 03:06:39] 2025-04-04 07:06:22,668 | INFO     | errors: (none)
[2025-04-04 03:06:39] 2025-04-04 07:06:22,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 03:06:39] 2025-04-04 07:06:22,668 | INFO     | pilot state: finished 
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | transexitcode: 0
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | exeerrorcode: 0
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | exeerrordiag: 
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | exitcode: 0
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | exitmsg: OK
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | cpuconsumptiontime: 75481 s
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | nevents: 400
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | neventsw: 0
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | pid: 1795715
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | pgrp: 1795715
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | corecount: 8
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | event service: False
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | sizes: {0: 2417178, 1: 2417206, 2: 2417377, 12: 2417405, 23: 2417433, 28: 2417667, 34: 2417823, 13542: 2447727, 13547: 2456724, 13557: 2456838}
[2025-04-04 03:06:39] 2025-04-04 07:06:22,669 | INFO     | --------------------------------------------------
[2025-04-04 03:06:39] 2025-04-04 07:06:22,670 | INFO     | 
[2025-04-04 03:06:39] 2025-04-04 07:06:22,670 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-04 03:06:39] 2025-04-04 07:06:22,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,705 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,706 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,707 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,707 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 03:06:39] 2025-04-04 07:06:22,707 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,707 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 03:06:39] 2025-04-04 07:06:22,707 | INFO     | job 6586396629 has completed (purged errors)
[2025-04-04 03:06:39] 2025-04-04 07:06:22,707 | INFO     | overall cleanup function is called
[2025-04-04 03:06:39] 2025-04-04 07:06:23,716 | INFO     | --- collectZombieJob: --- 10, [1795715]
[2025-04-04 03:06:39] 2025-04-04 07:06:23,716 | INFO     | zombie collector waiting for pid 1795715
[2025-04-04 03:06:39] 2025-04-04 07:06:23,716 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 03:06:39] 2025-04-04 07:06:23,716 | INFO     | collected zombie processes
[2025-04-04 03:06:39] 2025-04-04 07:06:23,717 | INFO     | will attempt to kill all subprocesses of pid=1795715
[2025-04-04 03:06:39] 2025-04-04 07:06:24,352 | INFO     | process IDs to be killed: [1795715] (in reverse order)
[2025-04-04 03:06:39] 2025-04-04 07:06:24,480 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 03:06:39] 2025-04-04 07:06:24,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 03:06:39] 2025-04-04 07:06:24,500 | INFO     | did not find any defunct processes belonging to 1795715
[2025-04-04 03:06:39] 2025-04-04 07:06:24,516 | INFO     | did not find any defunct processes belonging to 1795715
[2025-04-04 03:06:39] 2025-04-04 07:06:24,517 | INFO     | ready for new job
[2025-04-04 03:06:39] 2025-04-04 07:06:24,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 03:06:39] 2025-04-04 07:06:24,518 | INFO     | **************************************
[2025-04-04 03:06:39] 2025-04-04 07:06:24,519 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 03:06:39] 2025-04-04 07:06:24,519 | INFO     | **************************************
[2025-04-04 03:06:39] 2025-04-04 07:06:24,519 | INFO     | 
[2025-04-04 03:06:39] 2025-04-04 07:06:24,524 | INFO     | architecture information:
[2025-04-04 03:06:39] 2025-04-04 07:06:24,524 | INFO     | executing command: cat /etc/os-release
[2025-04-04 03:06:39] 2025-04-04 07:06:24,542 | INFO     | cat /etc/os-release:
[2025-04-04 03:06:39] NAME="CentOS Linux"
[2025-04-04 03:06:39] VERSION="7 (Core)"
[2025-04-04 03:06:39] ID="centos"
[2025-04-04 03:06:39] ID_LIKE="rhel fedora"
[2025-04-04 03:06:39] VERSION_ID="7"
[2025-04-04 03:06:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 03:06:39] ANSI_COLOR="0;31"
[2025-04-04 03:06:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 03:06:39] HOME_URL="https://www.centos.org/"
[2025-04-04 03:06:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 03:06:39] 
[2025-04-04 03:06:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 03:06:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 03:06:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 03:06:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 03:06:39] 
[2025-04-04 03:06:39] 2025-04-04 07:06:24,542 | INFO     | **************************************
[2025-04-04 03:06:39] 2025-04-04 07:06:25,045 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-04 03:06:39] 2025-04-04 07:06:25,101 | INFO     | sufficient remaining disk space (91385495552 B)
[2025-04-04 03:06:39] 2025-04-04 07:06:25,102 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 03:06:39] 2025-04-04 07:06:25,102 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 03:06:39] 2025-04-04 07:06:25,102 | INFO     | update_server=False
[2025-04-04 03:06:39] 2025-04-04 07:06:25,102 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 03:06:39] 2025-04-04 07:06:25,428 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 03:06:39] 2025-04-04 07:06:25,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 03:06:39] 2025-04-04 07:06:25,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 03:06:39] 2025-04-04 07:06:25,606 | INFO     | all payload control threads have been joined
[2025-04-04 03:06:39] 2025-04-04 07:06:25,741 | INFO     | all job control threads have been joined
[2025-04-04 03:06:39] 2025-04-04 07:06:25,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 03:06:39] 2025-04-04 07:06:25,759 | INFO     | aborting loop
[2025-04-04 03:06:39] 2025-04-04 07:06:25,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 03:06:39] 2025-04-04 07:06:26,081 | INFO     | all data control threads have been joined
[2025-04-04 03:06:39] 2025-04-04 07:06:26,108 | INFO     | [job] retrieve thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:26,446 | INFO     | [payload] validate_post thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:26,448 | INFO     | [job] validate thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:26,623 | INFO     | [payload] control thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:26,628 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:26,701 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:26,747 | INFO     | [job] control thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:26,764 | INFO     | [job] job monitor thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:26,861 | INFO     | [payload] failed_post thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:26,941 | INFO     | [data] copytool_in thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:26,942 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:27,087 | INFO     | [data] control thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:27,253 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:27,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 03:06:39] 2025-04-04 07:06:27,809 | INFO     | [data] copytool_out thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:27,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 03:06:39] 2025-04-04 07:06:28,686 | INFO     | [job] queue monitor thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:31,938 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 03:06:39] 2025-04-04 07:06:33,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040711665472)>', '<ExcThread(monitor, started 140040076252928)>']
[2025-04-04 03:06:39] 2025-04-04 07:06:34,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 03:06:39] 2025-04-04 07:06:34,484 | INFO     | [monitor] control thread has ended
[2025-04-04 03:06:39] 2025-04-04 07:06:38,988 | INFO     | all workflow threads have been joined
[2025-04-04 03:06:39] 2025-04-04 07:06:38,988 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 03:06:39] 2025-04-04 07:06:38,988 | INFO     | traces error code: 0
[2025-04-04 03:06:39] 2025-04-04 07:06:38,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 03:06:39] 2025-04-04 07:06:39,173 [wrapper] ==== pilot stdout END ====
[2025-04-04 03:06:39] 2025-04-04 07:06:39,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 03:06:39] 2025-04-04 07:06:39,179 [wrapper] pilotpid: 1784617
[2025-04-04 03:06:39] 2025-04-04 07:06:39,181 [wrapper] Pilot exit status: 0
[2025-04-04 03:06:39] 2025-04-04 07:06:39,202 [wrapper] pandaids: 6586396629
[2025-04-04 03:06:39] 2025-04-04 07:06:39,296 [wrapper] cleanup supervisor_pilot 3202790 1784618
[2025-04-04 03:06:39] 2025-04-04 07:06:39,301 [wrapper] Test setup, not cleaning
[2025-04-04 03:06:39] 2025-04-04 07:06:39,304 [wrapper] apfmon messages muted
[2025-04-04 03:06:39] 2025-04-04 07:06:39,308 [wrapper] ==== wrapper stdout END ====
[2025-04-04 03:06:39] 2025-04-04 07:06:39,310 [wrapper] ==== wrapper stderr END ====
[2025-04-04 03:06:39]  *** Error codes and diagnostics ***
[2025-04-04 03:06:39]     "exeErrorCode": 0,
[2025-04-04 03:06:39]     "exeErrorDiag": "",
[2025-04-04 03:06:39]     "pilotErrorCode": 0,
[2025-04-04 03:06:39]     "pilotErrorDiag": "",
[2025-04-04 03:06:39]  *** Listing of results directory ***
[2025-04-04 03:06:39] total 673028
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 18:28 pilot3.tar.gz
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 18:58 queuedata.json
[2025-04-04 03:06:39] -rwx------. 1 boincer umatlas     37140 Apr  3 18:59 runpilot2-wrapper.sh
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas       100 Apr  3 23:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 03:06:39] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  3 23:18 run_atlas
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas       105 Apr  3 23:18 job.xml
[2025-04-04 03:06:39] -rw-r--r--. 2 boincer umatlas 356065314 Apr  3 23:18 EVNT.43634896._000685.pool.root.1
[2025-04-04 03:06:39] -rw-r--r--. 2 boincer umatlas     17569 Apr  3 23:18 start_atlas.sh
[2025-04-04 03:06:39] drwxrwx--x. 2 boincer umatlas      4096 Apr  3 23:18 shared
[2025-04-04 03:06:39] -rw-r--r--. 2 boincer umatlas    508889 Apr  3 23:18 input.tar.gz
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas         0 Apr  3 23:18 boinc_lockfile
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas      2599 Apr  3 23:18 pandaJob.out
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas       467 Apr  3 23:18 setup.sh.local
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas    979994 Apr  3 23:19 agis_schedconf.cvmfs.json
[2025-04-04 03:06:39] drwx------. 4 boincer umatlas      4096 Apr  3 23:19 pilot3
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas      6857 Apr  4 03:02 init_data.xml
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas 326198580 Apr  4 03:05 HITS.43634898._018513.pool.root.1
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas       531 Apr  4 03:05 boinc_task_state.xml
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas        95 Apr  4 03:05 pilot_heartbeat.json
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas      1044 Apr  4 03:06 memory_monitor_summary.json
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas   1603525 Apr  4 03:06 agis_ddmendpoints.agis.ALL.json
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas    400489 Apr  4 03:06 log.43634898._018513.job.log.tgz.1
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas      7724 Apr  4 03:06 heartbeat.json
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 03:06 boinc_mmap_file
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas        28 Apr  4 03:06 wrapper_checkpoint.txt
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas      4353 Apr  4 03:06 pilotlog.txt
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas   1139070 Apr  4 03:06 log.43634898._018513.job.log.1
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas       357 Apr  4 03:06 output.list
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas       620 Apr  4 03:06 runtime_log
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas   1556480 Apr  4 03:06 result.tar.gz
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas     11424 Apr  4 03:06 runtime_log.err
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas       657 Apr  4 03:06 OaANDm5hiK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1AILDmUxYpxn.diag
[2025-04-04 03:06:39] -rw-r--r--. 1 boincer umatlas     20874 Apr  4 03:06 stderr.txt
[2025-04-04 03:06:39] HITS file was successfully produced:
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas 326198580 Apr  4 03:05 shared/HITS.pool.root.1
[2025-04-04 03:06:39]  *** Contents of shared directory: ***
[2025-04-04 03:06:39] total 668324
[2025-04-04 03:06:39] -rw-r--r--. 2 boincer umatlas 356065314 Apr  3 23:18 ATLAS.root_0
[2025-04-04 03:06:39] -rw-r--r--. 2 boincer umatlas     17569 Apr  3 23:18 start_atlas.sh
[2025-04-04 03:06:39] -rw-r--r--. 2 boincer umatlas    508889 Apr  3 23:18 input.tar.gz
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas 326198580 Apr  4 03:05 HITS.pool.root.1
[2025-04-04 03:06:39] -rw-------. 1 boincer umatlas   1556480 Apr  4 03:06 result.tar.gz
03:06:40 (1766035): run_atlas exited; CPU time 76124.913904
03:06:40 (1766035): called boinc_finish(0)

</stderr_txt>
]]>

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