Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:07:39 (3695834): wrapper (7.7.26015): starting
17:07:39 (3695834): wrapper: running run_atlas (--nthreads 12)
[2025-04-05 17:07:39] Arguments: --nthreads 12
[2025-04-05 17:07:39] Threads: 12
[2025-04-05 17:07:39] Checking for CVMFS
[2025-04-05 17:07:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-05 17:07:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-05 17:07:40] Running cvmfs_config stat atlas.cern.ch
[2025-04-05 17:07:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-05 17:07:40] 2.12.7.0 3477254 629 58516 144534 1 56 2127227 4096001 0 130560 0 602698 99.990 208746 1992 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-05 17:07:40] CVMFS is ok
[2025-04-05 17:07:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-05 17:07:40] Checking for apptainer binary...
[2025-04-05 17:07:40] apptainer is not installed, using version from CVMFS
[2025-04-05 17:07:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-05 17:07:40] ryzen7
[2025-04-05 17:07:40] apptainer works
[2025-04-05 17:07:40] Set ATHENA_PROC_NUMBER=12
[2025-04-05 17:07:40] Set ATHENA_CORE_NUMBER=12
[2025-04-05 17:07:40] Starting ATLAS job with PandaID=6586394811
[2025-04-05 17:07:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-05 18:29:39]  *** The last 200 lines of the pilot log: ***
[2025-04-05 18:29:39]  mtime=0
[2025-04-05 18:29:39]  protocol_id=None
[2025-04-05 18:29:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-05 18:29:39]  replicas=None
[2025-04-05 18:29:39]  scope=mc23_13p6TeV
[2025-04-05 18:29:39]  status=None
[2025-04-05 18:29:39]  status_code=0
[2025-04-05 18:29:39]  storage_token=
[2025-04-05 18:29:39]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586394811/log.43634898._018219.job.log.tgz.1
[2025-04-05 18:29:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/3e/log.43634898._018219.job.log.tgz.1
[2025-04-05 18:29:39]  workdir=None
[2025-04-05 18:29:39] ]
[2025-04-05 18:29:39] 2025-04-05 18:29:10,977 | INFO     | transferring file log.43634898._018219.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586394811/log.43634898._018219.job.log.tgz.1 t
[2025-04-05 18:29:39] 2025-04-05 18:29:10,977 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586394811/log.43634898._018219.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-05 18:29:39] 2025-04-05 18:29:10,986 | INFO     | adding to output.list: log.43634898._018219.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/3e/log.43634898._018219.job.log.tg
[2025-04-05 18:29:39] 2025-04-05 18:29:10,987 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-05 18:29:39] 2025-04-05 18:29:10,987 | INFO     | summary of transferred files:
[2025-04-05 18:29:39] 2025-04-05 18:29:10,987 | INFO     |  -- lfn=log.43634898._018219.job.log.tgz.1, status_code=0, status=transferred
[2025-04-05 18:29:39] 2025-04-05 18:29:10,987 | INFO     | stage-out finished correctly
[2025-04-05 18:29:39] 2025-04-05 18:29:12,932 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-05 18:29:39] 2025-04-05 18:29:13,198 | INFO     | monitor loop #366: job 0:6586394811 is in state 'finished'
[2025-04-05 18:29:39] 2025-04-05 18:29:13,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 18:29:39] 2025-04-05 18:29:13,694 | INFO     | job 6586394811 has state=finished
[2025-04-05 18:29:39] 2025-04-05 18:29:13,694 | INFO     | preparing for final server update for job 6586394811 in state='finished'
[2025-04-05 18:29:39] 2025-04-05 18:29:13,694 | INFO     | this job has now completed (state=finished)
[2025-04-05 18:29:39] 2025-04-05 18:29:13,694 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-05 18:29:39] 2025-04-05 18:29:13,694 | INFO     | log transfer has been attempted: DONE
[2025-04-05 18:29:39] 2025-04-05 18:29:13,695 | INFO     | job 6586394811 has finished - writing final server update
[2025-04-05 18:29:39] 2025-04-05 18:29:13,695 | INFO     | total number of processed events: 400 (read)
[2025-04-05 18:29:39] 2025-04-05 18:29:13,715 | INFO     | executing command: lscpu
[2025-04-05 18:29:39] 2025-04-05 18:29:13,731 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-05 18:29:39] 2025-04-05 18:29:15,706 | INFO     | monitor loop #367: job 0:6586394811 is in state 'finished'
[2025-04-05 18:29:39] 2025-04-05 18:29:15,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 18:29:39] 2025-04-05 18:29:17,359 | INFO     | PID=3699546 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-05 18:29:39] 2025-04-05 18:29:18,212 | INFO     | monitor loop #368: job 0:6586394811 is in state 'finished'
[2025-04-05 18:29:39] 2025-04-05 18:29:18,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 18:29:39] 2025-04-05 18:29:20,716 | INFO     | monitor loop #369: job 0:6586394811 is in state 'finished'
[2025-04-05 18:29:39] 2025-04-05 18:29:20,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-05 18:29:39] 2025-04-05 18:29:21,079 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-05 18:29:39] 2025-04-05 18:29:21,079 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6586394811/memory_monitor_summary.json (trf name=prmon)
[2025-04-05 18:29:39] 2025-04-05 18:29:21,079 | INFO     | extracted standard info from prmon json
[2025-04-05 18:29:39] 2025-04-05 18:29:21,079 | INFO     | extracted standard memory fields from prmon json
[2025-04-05 18:29:39] 2025-04-05 18:29:21,079 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-05 18:29:39] 2025-04-05 18:29:21,080 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-05 18:29:39] 2025-04-05 18:29:21,080 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-05 18:29:39] 2025-04-05 18:29:21,081 | INFO     | fitting pss+swap vs Time
[2025-04-05 18:29:39] 2025-04-05 18:29:21,081 | INFO     | sum of square deviations: 120605052.0
[2025-04-05 18:29:39] 2025-04-05 18:29:21,081 | INFO     | sum of deviations: 20519926762.0
[2025-04-05 18:29:39] 2025-04-05 18:29:21,081 | INFO     | mean x: 1743875399.0
[2025-04-05 18:29:39] 2025-04-05 18:29:21,081 | INFO     | mean y: 2752463.205479452
[2025-04-05 18:29:39] 2025-04-05 18:29:21,081 | INFO     | -- intersect: -296702857095.6174
[2025-04-05 18:29:39] 2025-04-05 18:29:21,081 | INFO     | intersect: -296702857095.6174
[2025-04-05 18:29:39] 2025-04-05 18:29:21,081 | INFO     | chi2: 2.308182155959374
[2025-04-05 18:29:39] 2025-04-05 18:29:21,081 | INFO     | -- intersect: -296702857095.6174
[2025-04-05 18:29:39] 2025-04-05 18:29:21,082 | INFO     | current memory leak: 170.14 B/s (using 73 data points, chi2=2.31)
[2025-04-05 18:29:39] 2025-04-05 18:29:21,082 | INFO     | ..............................
[2025-04-05 18:29:39] 2025-04-05 18:29:21,082 | INFO     | . Timing measurements:
[2025-04-05 18:29:39] 2025-04-05 18:29:21,082 | INFO     | . get job = 0 s
[2025-04-05 18:29:39] 2025-04-05 18:29:21,082 | INFO     | . initial setup = 1 s
[2025-04-05 18:29:39] 2025-04-05 18:29:21,082 | INFO     | . payload setup = 5 s
[2025-04-05 18:29:39] 2025-04-05 18:29:21,082 | INFO     | . stage-in = 0 s
[2025-04-05 18:29:39] 2025-04-05 18:29:21,082 | INFO     | . payload execution = 4855 s
[2025-04-05 18:29:39] 2025-04-05 18:29:21,082 | INFO     | . stage-out = 0 s
[2025-04-05 18:29:39] 2025-04-05 18:29:21,082 | INFO     | . log creation = 0 s
[2025-04-05 18:29:39] 2025-04-05 18:29:21,082 | INFO     | ..............................
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | 
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | job summary report
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | --------------------------------------------------
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | PanDA job id: 6586394811
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | task id: 43634898
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | errors: (none)
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | pilot state: finished 
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | transexitcode: 0
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | exeerrorcode: 0
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | exeerrordiag: 
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | exitcode: 0
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | exitmsg: OK
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | cpuconsumptiontime: 44248 s
[2025-04-05 18:29:39] 2025-04-05 18:29:21,139 | INFO     | nevents: 400
[2025-04-05 18:29:39] 2025-04-05 18:29:21,140 | INFO     | neventsw: 0
[2025-04-05 18:29:39] 2025-04-05 18:29:21,140 | INFO     | pid: 3706080
[2025-04-05 18:29:39] 2025-04-05 18:29:21,140 | INFO     | pgrp: 3706080
[2025-04-05 18:29:39] 2025-04-05 18:29:21,140 | INFO     | corecount: 12
[2025-04-05 18:29:39] 2025-04-05 18:29:21,140 | INFO     | event service: False
[2025-04-05 18:29:39] 2025-04-05 18:29:21,140 | INFO     | sizes: {0: 2417420, 5: 2417626, 11: 2417682, 4865: 2443762, 4866: 2452749, 4868: 2452805, 4876: 2453103}
[2025-04-05 18:29:39] 2025-04-05 18:29:21,140 | INFO     | --------------------------------------------------
[2025-04-05 18:29:39] 2025-04-05 18:29:21,140 | INFO     | 
[2025-04-05 18:29:39] 2025-04-05 18:29:21,140 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-05 18:29:39] 2025-04-05 18:29:21,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,151 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,151 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,151 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | job 6586394811 has completed (purged errors)
[2025-04-05 18:29:39] 2025-04-05 18:29:21,152 | INFO     | overall cleanup function is called
[2025-04-05 18:29:39] 2025-04-05 18:29:22,158 | INFO     | --- collectZombieJob: --- 10, [3706080]
[2025-04-05 18:29:39] 2025-04-05 18:29:22,158 | INFO     | zombie collector waiting for pid 3706080
[2025-04-05 18:29:39] 2025-04-05 18:29:22,158 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-05 18:29:39] 2025-04-05 18:29:22,158 | INFO     | collected zombie processes
[2025-04-05 18:29:39] 2025-04-05 18:29:22,158 | INFO     | will attempt to kill all subprocesses of pid=3706080
[2025-04-05 18:29:39] 2025-04-05 18:29:22,236 | INFO     | process IDs to be killed: [3706080] (in reverse order)
[2025-04-05 18:29:39] 2025-04-05 18:29:22,265 | WARNING  | found no corresponding commands to process id(s)
[2025-04-05 18:29:39] 2025-04-05 18:29:22,265 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-05 18:29:39] 2025-04-05 18:29:22,267 | INFO     | did not find any defunct processes belonging to 3706080
[2025-04-05 18:29:39] 2025-04-05 18:29:22,269 | INFO     | did not find any defunct processes belonging to 3706080
[2025-04-05 18:29:39] 2025-04-05 18:29:22,269 | INFO     | ready for new job
[2025-04-05 18:29:39] 2025-04-05 18:29:22,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-05 18:29:39] 2025-04-05 18:29:22,270 | INFO     | **************************************
[2025-04-05 18:29:39] 2025-04-05 18:29:22,270 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-05 18:29:39] 2025-04-05 18:29:22,270 | INFO     | **************************************
[2025-04-05 18:29:39] 2025-04-05 18:29:22,270 | INFO     | 
[2025-04-05 18:29:39] 2025-04-05 18:29:22,290 | INFO     | architecture information:
[2025-04-05 18:29:39] 2025-04-05 18:29:22,291 | INFO     | executing command: cat /etc/os-release
[2025-04-05 18:29:39] 2025-04-05 18:29:22,298 | INFO     | cat /etc/os-release:
[2025-04-05 18:29:39] NAME="CentOS Linux"
[2025-04-05 18:29:39] VERSION="7 (Core)"
[2025-04-05 18:29:39] ID="centos"
[2025-04-05 18:29:39] ID_LIKE="rhel fedora"
[2025-04-05 18:29:39] VERSION_ID="7"
[2025-04-05 18:29:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-05 18:29:39] ANSI_COLOR="0;31"
[2025-04-05 18:29:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-05 18:29:39] HOME_URL="https://www.centos.org/"
[2025-04-05 18:29:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-05 18:29:39] 
[2025-04-05 18:29:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-05 18:29:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-05 18:29:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-05 18:29:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-05 18:29:39] 
[2025-04-05 18:29:39] 2025-04-05 18:29:22,298 | INFO     | **************************************
[2025-04-05 18:29:39] 2025-04-05 18:29:22,798 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-05 18:29:39] 2025-04-05 18:29:22,809 | INFO     | sufficient remaining disk space (173389381632 B)
[2025-04-05 18:29:39] 2025-04-05 18:29:22,809 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-05 18:29:39] 2025-04-05 18:29:22,809 | INFO     | current server update state: UPDATING_FINAL
[2025-04-05 18:29:39] 2025-04-05 18:29:22,809 | INFO     | update_server=False
[2025-04-05 18:29:39] 2025-04-05 18:29:22,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-05 18:29:39] 2025-04-05 18:29:22,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-05 18:29:39] 2025-04-05 18:29:22,961 | INFO     | all job control threads have been joined
[2025-04-05 18:29:39] 2025-04-05 18:29:23,106 | INFO     | all data control threads have been joined
[2025-04-05 18:29:39] 2025-04-05 18:29:23,218 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-05 18:29:39] 2025-04-05 18:29:23,218 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-05 18:29:39] 2025-04-05 18:29:23,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-05 18:29:39] 2025-04-05 18:29:23,218 | INFO     | will abort loop
[2025-04-05 18:29:39] 2025-04-05 18:29:23,374 | INFO     | found 0 job(s) in 20 queues
[2025-04-05 18:29:39] 2025-04-05 18:29:23,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-05 18:29:39] 2025-04-05 18:29:23,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-05 18:29:39] 2025-04-05 18:29:23,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-05 18:29:39] 2025-04-05 18:29:23,814 | INFO     | [job] queue monitor thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:23,814 | INFO     | [job] retrieve thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:23,858 | INFO     | [payload] validate_post thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:23,910 | INFO     | all payload control threads have been joined
[2025-04-05 18:29:39] 2025-04-05 18:29:23,966 | INFO     | [job] control thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:24,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-05 18:29:39] 2025-04-05 18:29:24,110 | INFO     | [data] control thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:24,222 | INFO     | [job] job monitor thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:24,490 | INFO     | [payload] execute_payloads thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:24,510 | INFO     | [job] validate thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:24,746 | INFO     | [payload] validate_pre thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:24,842 | INFO     | [data] copytool_in thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:24,898 | INFO     | [job] create_data_payload thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:24,914 | INFO     | [payload] control thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:25,202 | INFO     | [payload] failed_post thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:26,079 | INFO     | [data] copytool_out thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:27,502 | INFO     | [data] queue_monitor thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:33,214 | INFO     | job.realtimelogging is not enabled
[2025-04-05 18:29:39] 2025-04-05 18:29:34,218 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-05 18:29:39] 2025-04-05 18:29:34,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140011697264448)>', '<ExcThread(monitor, started 140010951005952)>']
[2025-04-05 18:29:39] 2025-04-05 18:29:35,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-05 18:29:39] 2025-04-05 18:29:35,422 | INFO     | [monitor] control thread has ended
[2025-04-05 18:29:39] 2025-04-05 18:29:39,730 | INFO     | all workflow threads have been joined
[2025-04-05 18:29:39] 2025-04-05 18:29:39,730 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-05 18:29:39] 2025-04-05 18:29:39,730 | INFO     | traces error code: 0
[2025-04-05 18:29:39] 2025-04-05 18:29:39,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-05 18:29:39] 2025-04-05 18:29:39,781 [wrapper] ==== pilot stdout END ====
[2025-04-05 18:29:39] 2025-04-05 18:29:39,790 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-05 18:29:39] 2025-04-05 18:29:39,794 [wrapper] pilotpid: 3699546
[2025-04-05 18:29:39] 2025-04-05 18:29:39,796 [wrapper] Pilot exit status: 0
[2025-04-05 18:29:39] 2025-04-05 18:29:39,811 [wrapper] pandaids: 6586394811
[2025-04-05 18:29:39] 2025-04-05 18:29:39,829 [wrapper] cleanup supervisor_pilot 3717724 3699547
[2025-04-05 18:29:39] 2025-04-05 18:29:39,831 [wrapper] Test setup, not cleaning
[2025-04-05 18:29:39] 2025-04-05 18:29:39,833 [wrapper] apfmon messages muted
[2025-04-05 18:29:39] 2025-04-05 18:29:39,839 [wrapper] ==== wrapper stdout END ====
[2025-04-05 18:29:39] 2025-04-05 18:29:39,843 [wrapper] ==== wrapper stderr END ====
[2025-04-05 18:29:39]  *** Error codes and diagnostics ***
[2025-04-05 18:29:39]     "exeErrorCode": 0,
[2025-04-05 18:29:39]     "exeErrorDiag": "",
[2025-04-05 18:29:39]     "pilotErrorCode": 0,
[2025-04-05 18:29:39]     "pilotErrorDiag": "",
[2025-04-05 18:29:39]  *** Listing of results directory ***
[2025-04-05 18:29:39] total 673276
[2025-04-05 18:29:39] -rw-r--r-- 1 boinc boinc    495897 Apr  3 22:10 pilot3.tar.gz
[2025-04-05 18:29:39] -rwx------ 1 boinc boinc     37140 Apr  3 22:11 runpilot2-wrapper.sh
[2025-04-05 18:29:39] -rw-r--r-- 1 boinc boinc      5111 Apr  3 22:11 queuedata.json
[2025-04-05 18:29:39] -rw-rw-r-- 1 boinc boinc       100 Apr  5 17:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-05 18:29:39] -rwxr-xr-x 1 boinc boinc      7986 Apr  5 17:07 run_atlas
[2025-04-05 18:29:39] -rw-rw-r-- 1 boinc boinc       105 Apr  5 17:07 job.xml
[2025-04-05 18:29:39] -rw-r--r-- 2 boinc boinc     17569 Apr  5 17:07 start_atlas.sh
[2025-04-05 18:29:39] drwxrwx--x 2 boinc boinc      4096 Apr  5 17:07 shared
[2025-04-05 18:29:39] -rw-r--r-- 2 boinc boinc    508882 Apr  5 17:07 input.tar.gz
[2025-04-05 18:29:39] -rw-rw-r-- 1 boinc boinc      9677 Apr  5 17:07 init_data.xml
[2025-04-05 18:29:39] -rw-r--r-- 2 boinc boinc 360527062 Apr  5 17:07 EVNT.43634896._000649.pool.root.1
[2025-04-05 18:29:39] -rw-rw-r-- 1 boinc boinc         0 Apr  5 17:07 boinc_lockfile
[2025-04-05 18:29:39] -rw-rw-r-- 1 boinc boinc      2598 Apr  5 17:07 pandaJob.out
[2025-04-05 18:29:39] -rw------- 1 boinc boinc       424 Apr  5 17:07 setup.sh.local
[2025-04-05 18:29:39] -rw------- 1 boinc boinc    979971 Apr  5 17:07 agis_schedconf.cvmfs.json
[2025-04-05 18:29:39] -rw------- 1 boinc boinc   1603525 Apr  5 17:07 agis_ddmendpoints.agis.ALL.json
[2025-04-05 18:29:39] drwx------ 4 boinc boinc      4096 Apr  5 17:07 pilot3
[2025-04-05 18:29:39] -rw------- 1 boinc boinc        95 Apr  5 18:28 pilot_heartbeat.json
[2025-04-05 18:29:39] -rw------- 1 boinc boinc 323392208 Apr  5 18:28 HITS.43634898._018219.pool.root.1
[2025-04-05 18:29:39] -rw------- 1 boinc boinc      1015 Apr  5 18:29 memory_monitor_summary.json
[2025-04-05 18:29:39] -rw-rw-r-- 1 boinc boinc       531 Apr  5 18:29 boinc_task_state.xml
[2025-04-05 18:29:39] -rw------- 1 boinc boinc    350292 Apr  5 18:29 log.43634898._018219.job.log.tgz.1
[2025-04-05 18:29:39] -rw------- 1 boinc boinc      7647 Apr  5 18:29 heartbeat.json
[2025-04-05 18:29:39] -rw-rw-r-- 1 boinc boinc        27 Apr  5 18:29 wrapper_checkpoint.txt
[2025-04-05 18:29:39] -rw-rw-r-- 1 boinc boinc      8192 Apr  5 18:29 boinc_mmap_file
[2025-04-05 18:29:39] -rw------- 1 boinc boinc      4635 Apr  5 18:29 pilotlog.txt
[2025-04-05 18:29:39] -rw------- 1 boinc boinc    484746 Apr  5 18:29 log.43634898._018219.job.log.1
[2025-04-05 18:29:39] -rw------- 1 boinc boinc       357 Apr  5 18:29 output.list
[2025-04-05 18:29:39] -rw-rw-r-- 1 boinc boinc       620 Apr  5 18:29 runtime_log
[2025-04-05 18:29:39] -rw------- 1 boinc boinc    849920 Apr  5 18:29 result.tar.gz
[2025-04-05 18:29:39] -rw-rw-r-- 1 boinc boinc     11399 Apr  5 18:29 runtime_log.err
[2025-04-05 18:29:39] -rw------- 1 boinc boinc       649 Apr  5 18:29 oibLDm7xhK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmK7HLDmf60pMn.diag
[2025-04-05 18:29:39] -rw-rw-r-- 1 boinc boinc     21518 Apr  5 18:29 stderr.txt
[2025-04-05 18:29:39] HITS file was successfully produced:
[2025-04-05 18:29:39] -rw------- 1 boinc boinc 323392208 Apr  5 18:28 shared/HITS.pool.root.1
[2025-04-05 18:29:39]  *** Contents of shared directory: ***
[2025-04-05 18:29:39] total 669256
[2025-04-05 18:29:39] -rw-r--r-- 2 boinc boinc     17569 Apr  5 17:07 start_atlas.sh
[2025-04-05 18:29:39] -rw-r--r-- 2 boinc boinc    508882 Apr  5 17:07 input.tar.gz
[2025-04-05 18:29:39] -rw-r--r-- 2 boinc boinc 360527062 Apr  5 17:07 ATLAS.root_0
[2025-04-05 18:29:39] -rw------- 1 boinc boinc 323392208 Apr  5 18:28 HITS.pool.root.1
[2025-04-05 18:29:39] -rw------- 1 boinc boinc    849920 Apr  5 18:29 result.tar.gz
18:29:41 (3695834): run_atlas exited; CPU time 44277.808864
18:29:41 (3695834): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN