Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:48:15 (904067): wrapper (7.7.26015): starting
02:48:15 (904067): wrapper: running run_atlas (--nthreads 9)
[2025-04-04 02:48:15] Arguments: --nthreads 9
[2025-04-04 02:48:15] Threads: 9
[2025-04-04 02:48:15] Checking for CVMFS
[2025-04-04 02:48:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 02:48:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 02:48:15] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 02:48:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 02:48:15] 2.12.6.0 1724982 190894 440564 144480 2 304 19493191 32935936 8974 130560 0 20234871 99.870 6113890 17094 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-04 02:48:15] CVMFS is ok
[2025-04-04 02:48:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-04 02:48:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-04 02:48:15] Further information can be found at the LHC@home message board.
[2025-04-04 02:48:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 02:48:15] Checking for apptainer binary...
[2025-04-04 02:48:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 02:48:15] Running /usr/bin/apptainer --version
[2025-04-04 02:48:16] apptainer version 1.4.0-1.el9
[2025-04-04 02:48:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 02:48:16] c6-2-29-1.aglt2.org
[2025-04-04 02:48:16] apptainer works
[2025-04-04 02:48:16] Set ATHENA_PROC_NUMBER=9
[2025-04-04 02:48:16] Set ATHENA_CORE_NUMBER=9
[2025-04-04 02:48:16] Starting ATLAS job with PandaID=6586394815
[2025-04-04 02:48:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 14:38:46]  *** The last 200 lines of the pilot log: ***
[2025-04-04 14:38:46] 2025-04-04 18:38:17,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 14:38:46] 2025-04-04 18:38:19,754 | INFO     | monitor loop #2287: job 0:6586394815 is in state 'finished'
[2025-04-04 14:38:46] 2025-04-04 18:38:19,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 14:38:46] 2025-04-04 18:38:21,265 | INFO     | PID=907797 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-04 14:38:46] 2025-04-04 18:38:21,285 | INFO     | .. there are 17 such processes running
[2025-04-04 14:38:46] 2025-04-04 18:38:22,274 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-04 14:38:46] 2025-04-04 18:38:22,275 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6586394815/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 14:38:46] 2025-04-04 18:38:22,276 | INFO     | extracted standard info from prmon json
[2025-04-04 14:38:46] 2025-04-04 18:38:22,276 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 14:38:46] 2025-04-04 18:38:22,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 14:38:46] 2025-04-04 18:38:22,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 14:38:46] 2025-04-04 18:38:22,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 14:38:46] 2025-04-04 18:38:22,296 | INFO     | monitor loop #2288: job 0:6586394815 is in state 'finished'
[2025-04-04 14:38:46] 2025-04-04 18:38:22,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 14:38:46] 2025-04-04 18:38:22,306 | INFO     | fitting pss+swap vs Time
[2025-04-04 14:38:46] 2025-04-04 18:38:22,307 | INFO     | sum of square deviations: 104994314652.59138
[2025-04-04 14:38:46] 2025-04-04 18:38:22,419 | INFO     | sum of deviations: 2969930391.634346
[2025-04-04 14:38:46] 2025-04-04 18:38:22,420 | INFO     | mean x: 1743770560.866571
[2025-04-04 14:38:46] 2025-04-04 18:38:22,420 | INFO     | mean y: 2222011.512195122
[2025-04-04 14:38:46] 2025-04-04 18:38:22,420 | INFO     | -- intersect: -47103299.11906082
[2025-04-04 14:38:46] 2025-04-04 18:38:22,420 | INFO     | intersect: -47103299.11906082
[2025-04-04 14:38:46] 2025-04-04 18:38:22,426 | INFO     | chi2: 8.107179517959645
[2025-04-04 14:38:46] 2025-04-04 18:38:22,428 | INFO     | sum of square deviations: 102751052153.80972
[2025-04-04 14:38:46] 2025-04-04 18:38:22,509 | INFO     | sum of deviations: 219561887196.23663
[2025-04-04 14:38:46] 2025-04-04 18:38:22,509 | INFO     | mean x: 1743770408.3728323
[2025-04-04 14:38:46] 2025-04-04 18:38:22,509 | INFO     | mean y: 2236735.49132948
[2025-04-04 14:38:46] 2025-04-04 18:38:22,509 | INFO     | -- intersect: -3723910235.015344
[2025-04-04 14:38:46] 2025-04-04 18:38:22,509 | INFO     | intersect: -3723910235.015344
[2025-04-04 14:38:46] 2025-04-04 18:38:22,536 | INFO     | chi2: 3.8562851283465753
[2025-04-04 14:38:46] 2025-04-04 18:38:22,536 | INFO     | current chi2=3.8562851283465753 (change=52.43370250031053 %)
[2025-04-04 14:38:46] 2025-04-04 18:38:22,537 | INFO     | sum of square deviations: 100539976304.97234
[2025-04-04 14:38:46] 2025-04-04 18:38:22,607 | INFO     | sum of deviations: 227846762506.70004
[2025-04-04 14:38:46] 2025-04-04 18:38:22,607 | INFO     | mean x: 1743770255.879185
[2025-04-04 14:38:46] 2025-04-04 18:38:22,607 | INFO     | mean y: 2237308.3216885007
[2025-04-04 14:38:46] 2025-04-04 18:38:22,607 | INFO     | -- intersect: -3949548060.638087
[2025-04-04 14:38:46] 2025-04-04 18:38:22,608 | INFO     | intersect: -3949548060.638087
[2025-04-04 14:38:46] 2025-04-04 18:38:22,608 | INFO     | chi2: 3.8409825413288305
[2025-04-04 14:38:46] 2025-04-04 18:38:22,608 | INFO     | current chi2=3.8409825413288305 (change=0.3968219804406926 %)
[2025-04-04 14:38:46] 2025-04-04 18:38:22,608 | INFO     | right removable region: 686
[2025-04-04 14:38:46] 2025-04-04 18:38:22,620 | INFO     | sum of square deviations: 102750683713.80971
[2025-04-04 14:38:46] 2025-04-04 18:38:22,680 | INFO     | sum of deviations: -137395843334.29176
[2025-04-04 14:38:46] 2025-04-04 18:38:22,681 | INFO     | mean x: 1743770713.3728323
[2025-04-04 14:38:46] 2025-04-04 18:38:22,681 | INFO     | mean y: 2231542.388728324
[2025-04-04 14:38:46] 2025-04-04 18:38:22,681 | INFO     | -- intersect: 2333961503.5519876
[2025-04-04 14:38:46] 2025-04-04 18:38:22,681 | INFO     | intersect: 2333961503.5519876
[2025-04-04 14:38:46] 2025-04-04 18:38:22,682 | INFO     | chi2: 6.115573761345735
[2025-04-04 14:38:46] 2025-04-04 18:38:22,682 | INFO     | current chi2=6.115573761345735 (change=24.565951107927887 %)
[2025-04-04 14:38:46] 2025-04-04 18:38:22,682 | INFO     | left removable region: 10
[2025-04-04 14:38:46] 2025-04-04 18:38:22,683 | INFO     | sum of square deviations: 95787023497.33113
[2025-04-04 14:38:46] 2025-04-04 18:38:22,772 | INFO     | sum of deviations: -3527791324.6124487
[2025-04-04 14:38:46] 2025-04-04 18:38:22,773 | INFO     | mean x: 1743770530.393491
[2025-04-04 14:38:46] 2025-04-04 18:38:22,773 | INFO     | mean y: 2253904.678994083
[2025-04-04 14:38:46] 2025-04-04 18:38:22,773 | INFO     | -- intersect: 66476158.640235566
[2025-04-04 14:38:46] 2025-04-04 18:38:22,773 | INFO     | intersect: 66476158.640235566
[2025-04-04 14:38:46] 2025-04-04 18:38:22,774 | INFO     | chi2: 0.9866632064618065
[2025-04-04 14:38:46] 2025-04-04 18:38:22,774 | INFO     | -- intersect: 66476158.640235566
[2025-04-04 14:38:46] 2025-04-04 18:38:22,774 | INFO     | current memory leak: -0.04 B/s (using 676 data points, chi2=0.99)
[2025-04-04 14:38:46] 2025-04-04 18:38:22,775 | INFO     | ..............................
[2025-04-04 14:38:46] 2025-04-04 18:38:22,775 | INFO     | . Timing measurements:
[2025-04-04 14:38:46] 2025-04-04 18:38:22,775 | INFO     | . get job = 0 s
[2025-04-04 14:38:46] 2025-04-04 18:38:22,775 | INFO     | . initial setup = 2 s
[2025-04-04 14:38:46] 2025-04-04 18:38:22,775 | INFO     | . payload setup = 5 s
[2025-04-04 14:38:46] 2025-04-04 18:38:22,775 | INFO     | . stage-in = 0 s
[2025-04-04 14:38:46] 2025-04-04 18:38:22,775 | INFO     | . payload execution = 42507 s
[2025-04-04 14:38:46] 2025-04-04 18:38:22,775 | INFO     | . stage-out = 13 s
[2025-04-04 14:38:46] 2025-04-04 18:38:22,775 | INFO     | . log creation = 3 s
[2025-04-04 14:38:46] 2025-04-04 18:38:22,776 | INFO     | ..............................
[2025-04-04 14:38:46] 2025-04-04 18:38:23,993 | INFO     | 
[2025-04-04 14:38:46] 2025-04-04 18:38:23,994 | INFO     | job summary report
[2025-04-04 14:38:46] 2025-04-04 18:38:23,994 | INFO     | --------------------------------------------------
[2025-04-04 14:38:46] 2025-04-04 18:38:23,994 | INFO     | PanDA job id: 6586394815
[2025-04-04 14:38:46] 2025-04-04 18:38:23,994 | INFO     | task id: 43634898
[2025-04-04 14:38:46] 2025-04-04 18:38:23,994 | INFO     | errors: (none)
[2025-04-04 14:38:46] 2025-04-04 18:38:23,994 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 14:38:46] 2025-04-04 18:38:23,995 | INFO     | pilot state: finished 
[2025-04-04 14:38:46] 2025-04-04 18:38:23,995 | INFO     | transexitcode: 0
[2025-04-04 14:38:46] 2025-04-04 18:38:23,995 | INFO     | exeerrorcode: 0
[2025-04-04 14:38:46] 2025-04-04 18:38:23,995 | INFO     | exeerrordiag: 
[2025-04-04 14:38:46] 2025-04-04 18:38:23,995 | INFO     | exitcode: 0
[2025-04-04 14:38:46] 2025-04-04 18:38:23,995 | INFO     | exitmsg: OK
[2025-04-04 14:38:46] 2025-04-04 18:38:23,995 | INFO     | cpuconsumptiontime: 79657 s
[2025-04-04 14:38:46] 2025-04-04 18:38:23,996 | INFO     | nevents: 400
[2025-04-04 14:38:46] 2025-04-04 18:38:23,996 | INFO     | neventsw: 0
[2025-04-04 14:38:46] 2025-04-04 18:38:23,996 | INFO     | pid: 914709
[2025-04-04 14:38:46] 2025-04-04 18:38:23,996 | INFO     | pgrp: 914709
[2025-04-04 14:38:46] 2025-04-04 18:38:23,996 | INFO     | corecount: 9
[2025-04-04 14:38:46] 2025-04-04 18:38:23,996 | INFO     | event service: False
[2025-04-04 14:38:46] 2025-04-04 18:38:23,996 | INFO     | sizes: {0: 2417399, 1: 2417399, 5: 2417633, 11: 2417689, 42518: 2460213, 42519: 2460212, 42533: 2469393, 42582: 2469507}
[2025-04-04 14:38:46] 2025-04-04 18:38:23,997 | INFO     | --------------------------------------------------
[2025-04-04 14:38:46] 2025-04-04 18:38:23,997 | INFO     | 
[2025-04-04 14:38:46] 2025-04-04 18:38:23,997 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-04 14:38:46] 2025-04-04 18:38:24,200 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,201 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,202 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 14:38:46] 2025-04-04 18:38:24,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,203 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 14:38:46] 2025-04-04 18:38:24,219 | INFO     | job 6586394815 has completed (purged errors)
[2025-04-04 14:38:46] 2025-04-04 18:38:24,220 | INFO     | overall cleanup function is called
[2025-04-04 14:38:46] 2025-04-04 18:38:25,258 | INFO     | --- collectZombieJob: --- 10, [914709]
[2025-04-04 14:38:46] 2025-04-04 18:38:25,258 | INFO     | zombie collector waiting for pid 914709
[2025-04-04 14:38:46] 2025-04-04 18:38:25,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 14:38:46] 2025-04-04 18:38:25,259 | INFO     | collected zombie processes
[2025-04-04 14:38:46] 2025-04-04 18:38:25,259 | INFO     | will attempt to kill all subprocesses of pid=914709
[2025-04-04 14:38:46] 2025-04-04 18:38:28,740 | INFO     | process IDs to be killed: [914709] (in reverse order)
[2025-04-04 14:38:46] 2025-04-04 18:38:29,129 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 14:38:46] 2025-04-04 18:38:29,130 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 14:38:46] 2025-04-04 18:38:29,189 | INFO     | did not find any defunct processes belonging to 914709
[2025-04-04 14:38:46] 2025-04-04 18:38:29,216 | INFO     | did not find any defunct processes belonging to 914709
[2025-04-04 14:38:46] 2025-04-04 18:38:29,217 | INFO     | ready for new job
[2025-04-04 14:38:46] 2025-04-04 18:38:29,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 14:38:46] 2025-04-04 18:38:29,219 | INFO     | **************************************
[2025-04-04 14:38:46] 2025-04-04 18:38:29,219 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 14:38:46] 2025-04-04 18:38:29,219 | INFO     | **************************************
[2025-04-04 14:38:46] 2025-04-04 18:38:29,219 | INFO     | 
[2025-04-04 14:38:46] 2025-04-04 18:38:29,235 | INFO     | architecture information:
[2025-04-04 14:38:46] 2025-04-04 18:38:29,275 | INFO     | executing command: cat /etc/os-release
[2025-04-04 14:38:46] 2025-04-04 18:38:29,365 | INFO     | cat /etc/os-release:
[2025-04-04 14:38:46] NAME="CentOS Linux"
[2025-04-04 14:38:46] VERSION="7 (Core)"
[2025-04-04 14:38:46] ID="centos"
[2025-04-04 14:38:46] ID_LIKE="rhel fedora"
[2025-04-04 14:38:46] VERSION_ID="7"
[2025-04-04 14:38:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 14:38:46] ANSI_COLOR="0;31"
[2025-04-04 14:38:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 14:38:46] HOME_URL="https://www.centos.org/"
[2025-04-04 14:38:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 14:38:46] 
[2025-04-04 14:38:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 14:38:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 14:38:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 14:38:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 14:38:46] 
[2025-04-04 14:38:46] 2025-04-04 18:38:29,366 | INFO     | **************************************
[2025-04-04 14:38:46] 2025-04-04 18:38:29,869 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-04 14:38:46] 2025-04-04 18:38:30,035 | INFO     | sufficient remaining disk space (73804021760 B)
[2025-04-04 14:38:46] 2025-04-04 18:38:30,035 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 14:38:46] 2025-04-04 18:38:30,035 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 14:38:46] 2025-04-04 18:38:30,035 | INFO     | update_server=False
[2025-04-04 14:38:46] 2025-04-04 18:38:30,035 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 14:38:46] 2025-04-04 18:38:30,046 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 14:38:46] 2025-04-04 18:38:30,047 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 14:38:46] 2025-04-04 18:38:30,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 14:38:46] 2025-04-04 18:38:30,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 14:38:46] 2025-04-04 18:38:30,141 | INFO     | all data control threads have been joined
[2025-04-04 14:38:46] 2025-04-04 18:38:30,830 | INFO     | all payload control threads have been joined
[2025-04-04 14:38:46] 2025-04-04 18:38:30,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 14:38:46] 2025-04-04 18:38:30,919 | INFO     | aborting loop
[2025-04-04 14:38:46] 2025-04-04 18:38:30,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 14:38:46] 2025-04-04 18:38:31,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 14:38:46] 2025-04-04 18:38:31,040 | INFO     | [job] retrieve thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:31,159 | INFO     | [data] control thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:31,342 | INFO     | all job control threads have been joined
[2025-04-04 14:38:46] 2025-04-04 18:38:31,836 | INFO     | [payload] control thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:31,925 | INFO     | [job] job monitor thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:31,933 | INFO     | [payload] failed_post thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:31,967 | INFO     | [payload] validate_post thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:32,038 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:32,080 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:32,105 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:32,111 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:32,121 | INFO     | [job] validate thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:32,348 | INFO     | [job] control thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:32,373 | INFO     | [data] copytool_in thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:32,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 14:38:46] 2025-04-04 18:38:32,981 | INFO     | [data] copytool_out thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:33,821 | INFO     | [job] queue monitor thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:35,037 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 14:38:46] 2025-04-04 18:38:36,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393415231296)>', '<ExcThread(monitor, started 140392917874432)>']
[2025-04-04 14:38:46] 2025-04-04 18:38:37,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 14:38:46] 2025-04-04 18:38:37,089 | INFO     | [monitor] control thread has ended
[2025-04-04 14:38:46] 2025-04-04 18:38:41,515 | INFO     | all workflow threads have been joined
[2025-04-04 14:38:46] 2025-04-04 18:38:41,515 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 14:38:46] 2025-04-04 18:38:41,516 | INFO     | traces error code: 0
[2025-04-04 14:38:46] 2025-04-04 18:38:41,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 14:38:46] 2025-04-04 18:38:45,586 [wrapper] ==== pilot stdout END ====
[2025-04-04 14:38:46] 2025-04-04 18:38:45,591 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 14:38:46] 2025-04-04 18:38:45,595 [wrapper] pilotpid: 907797
[2025-04-04 14:38:46] 2025-04-04 18:38:45,598 [wrapper] Pilot exit status: 0
[2025-04-04 14:38:46] 2025-04-04 18:38:45,668 [wrapper] pandaids: 6586394815
[2025-04-04 14:38:46] 2025-04-04 18:38:45,813 [wrapper] cleanup supervisor_pilot 3236831 907798
[2025-04-04 14:38:46] 2025-04-04 18:38:45,852 [wrapper] Test setup, not cleaning
[2025-04-04 14:38:46] 2025-04-04 18:38:45,907 [wrapper] apfmon messages muted
[2025-04-04 14:38:46] 2025-04-04 18:38:45,948 [wrapper] ==== wrapper stdout END ====
[2025-04-04 14:38:46] 2025-04-04 18:38:46,000 [wrapper] ==== wrapper stderr END ====
[2025-04-04 14:38:46]  *** Error codes and diagnostics ***
[2025-04-04 14:38:46]     "exeErrorCode": 0,
[2025-04-04 14:38:46]     "exeErrorDiag": "",
[2025-04-04 14:38:46]     "pilotErrorCode": 0,
[2025-04-04 14:38:46]     "pilotErrorDiag": "",
[2025-04-04 14:38:46]  *** Listing of results directory ***
[2025-04-04 14:38:46] total 677600
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 18:10 pilot3.tar.gz
[2025-04-04 14:38:46] -rwx------. 1 boincer umatlas     37140 Apr  3 18:11 runpilot2-wrapper.sh
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 18:11 queuedata.json
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas       100 Apr  4 02:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 14:38:46] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  4 02:48 run_atlas
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas       105 Apr  4 02:48 job.xml
[2025-04-04 14:38:46] -rw-r--r--. 2 boincer umatlas 360527062 Apr  4 02:48 EVNT.43634896._000649.pool.root.1
[2025-04-04 14:38:46] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 02:48 start_atlas.sh
[2025-04-04 14:38:46] drwxrwx--x. 2 boincer umatlas      4096 Apr  4 02:48 shared
[2025-04-04 14:38:46] -rw-r--r--. 2 boincer umatlas    508878 Apr  4 02:48 input.tar.gz
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas         0 Apr  4 02:48 boinc_lockfile
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas      2599 Apr  4 02:48 pandaJob.out
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas       467 Apr  4 02:48 setup.sh.local
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas    979970 Apr  4 02:48 agis_schedconf.cvmfs.json
[2025-04-04 14:38:46] drwx------. 4 boincer umatlas      4096 Apr  4 02:48 pilot3
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas      6840 Apr  4 14:30 init_data.xml
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas 321960717 Apr  4 14:31 HITS.43634898._018223.pool.root.1
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas       532 Apr  4 14:31 boinc_task_state.xml
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas      1054 Apr  4 14:37 memory_monitor_summary.json
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas   1603525 Apr  4 14:37 agis_ddmendpoints.agis.ALL.json
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas    623702 Apr  4 14:37 log.43634898._018223.job.log.tgz.1
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas        95 Apr  4 14:38 pilot_heartbeat.json
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas      7738 Apr  4 14:38 heartbeat.json
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas        28 Apr  4 14:38 wrapper_checkpoint.txt
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 14:38 boinc_mmap_file
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas      4476 Apr  4 14:38 pilotlog.txt
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas   3145621 Apr  4 14:38 log.43634898._018223.job.log.1
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas       357 Apr  4 14:38 output.list
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas       620 Apr  4 14:38 runtime_log
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas   3788800 Apr  4 14:38 result.tar.gz
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas     11424 Apr  4 14:38 runtime_log.err
[2025-04-04 14:38:46] -rw-------. 1 boincer umatlas       664 Apr  4 14:38 9FiLDm7xhK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmO7HLDm7oPdSm.diag
[2025-04-04 14:38:46] -rw-r--r--. 1 boincer umatlas     21252 Apr  4 14:38 stderr.txt
[2025-04-04 14:38:47] HITS file was successfully produced:
[2025-04-04 14:38:47] -rw-------. 1 boincer umatlas 321960717 Apr  4 14:31 shared/HITS.pool.root.1
[2025-04-04 14:38:47]  *** Contents of shared directory: ***
[2025-04-04 14:38:47] total 670720
[2025-04-04 14:38:47] -rw-r--r--. 2 boincer umatlas 360527062 Apr  4 02:48 ATLAS.root_0
[2025-04-04 14:38:47] -rw-r--r--. 2 boincer umatlas     17569 Apr  4 02:48 start_atlas.sh
[2025-04-04 14:38:47] -rw-r--r--. 2 boincer umatlas    508878 Apr  4 02:48 input.tar.gz
[2025-04-04 14:38:47] -rw-------. 1 boincer umatlas 321960717 Apr  4 14:31 HITS.pool.root.1
[2025-04-04 14:38:47] -rw-------. 1 boincer umatlas   3788800 Apr  4 14:38 result.tar.gz
14:38:48 (904067): run_atlas exited; CPU time 80999.131741
14:38:48 (904067): called boinc_finish(0)

</stderr_txt>
]]>

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